data_2BCV # _entry.id 2BCV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2BCV NDB PD0725 RCSB RCSB034944 WWPDB D_1000034944 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2BCQ . unspecified PDB 2BCR . unspecified PDB 2BCS . unspecified PDB 2BCU . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BCV _pdbx_database_status.recvd_initial_deposition_date 2005-10-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Garcia-Diaz, M.' 1 'Bebenek, K.' 2 'Krahn, J.M.' 3 'Pedersen, L.C.' 4 'Kunkel, T.A.' 5 # _citation.id primary _citation.title 'Structural analysis of strand misalignment during DNA synthesis by a human DNA polymerase' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 124 _citation.page_first 331 _citation.page_last 342 _citation.year 2006 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16439207 _citation.pdbx_database_id_DOI 10.1016/j.cell.2005.10.039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Garcia-Diaz, M.' 1 primary 'Bebenek, K.' 2 primary 'Krahn, J.M.' 3 primary 'Pedersen, L.C.' 4 primary 'Kunkel, T.A.' 5 # _cell.entry_id 2BCV _cell.length_a 55.140 _cell.length_b 62.988 _cell.length_c 141.936 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BCV _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*GP*CP*CP*G)-3'" 1191.818 1 ? ? ? Template 2 polymer syn "5'-D(*CP*AP*GP*TP*AP*(O2C))-3'" 1793.219 1 ? ? ? Primer 3 polymer syn "5'-D(*CP*GP*GP*CP*AP*GP*TP*TP*AP*CP*TP*G)-3'" 3678.403 1 ? ? ? 'Downstream primer' 4 polymer man 'DNA polymerase lambda' 37479.750 1 '2.7.7.7, 4.2.99.-' ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 7 non-polymer syn "THYMIDINE-5'-TRIPHOSPHATE" 482.168 1 ? ? ? ? 8 water nat water 18.015 345 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name 'Pol Lambda, DNA polymerase kappa, DNA polymerase beta-2, Pol beta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)' GCCG D ? 2 polydeoxyribonucleotide no yes '(DC)(DA)(DG)(DT)(DA)(O2C)' CAGTAN P ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DC)(DA)(DG)(DT)(DT)(DA)(DC)(DT)(DG)' CGGCAGTTACTG T ? 4 'polypeptide(L)' no no ;MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESG HLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVF RLLGLPYREPAERDW ; ;MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESG HLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVF RLLGLPYREPAERDW ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DG n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DT n 2 5 DA n 2 6 O2C n 3 1 DC n 3 2 DG n 3 3 DG n 3 4 DC n 3 5 DA n 3 6 DG n 3 7 DT n 3 8 DT n 3 9 DA n 3 10 DC n 3 11 DT n 3 12 DG n 4 1 MET n 4 2 ALA n 4 3 GLN n 4 4 PRO n 4 5 SER n 4 6 SER n 4 7 GLN n 4 8 LYS n 4 9 ALA n 4 10 THR n 4 11 ASN n 4 12 HIS n 4 13 ASN n 4 14 LEU n 4 15 HIS n 4 16 ILE n 4 17 THR n 4 18 GLU n 4 19 LYS n 4 20 LEU n 4 21 GLU n 4 22 VAL n 4 23 LEU n 4 24 ALA n 4 25 LYS n 4 26 ALA n 4 27 TYR n 4 28 SER n 4 29 VAL n 4 30 GLN n 4 31 GLY n 4 32 ASP n 4 33 LYS n 4 34 TRP n 4 35 ARG n 4 36 ALA n 4 37 LEU n 4 38 GLY n 4 39 TYR n 4 40 ALA n 4 41 LYS n 4 42 ALA n 4 43 ILE n 4 44 ASN n 4 45 ALA n 4 46 LEU n 4 47 LYS n 4 48 SER n 4 49 PHE n 4 50 HIS n 4 51 LYS n 4 52 PRO n 4 53 VAL n 4 54 THR n 4 55 SER n 4 56 TYR n 4 57 GLN n 4 58 GLU n 4 59 ALA n 4 60 CYS n 4 61 SER n 4 62 ILE n 4 63 PRO n 4 64 GLY n 4 65 ILE n 4 66 GLY n 4 67 LYS n 4 68 ARG n 4 69 MET n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ILE n 4 75 GLU n 4 76 ILE n 4 77 LEU n 4 78 GLU n 4 79 SER n 4 80 GLY n 4 81 HIS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 ASP n 4 87 HIS n 4 88 ILE n 4 89 SER n 4 90 GLU n 4 91 SER n 4 92 VAL n 4 93 PRO n 4 94 VAL n 4 95 LEU n 4 96 GLU n 4 97 LEU n 4 98 PHE n 4 99 SER n 4 100 ASN n 4 101 ILE n 4 102 TRP n 4 103 GLY n 4 104 ALA n 4 105 GLY n 4 106 THR n 4 107 LYS n 4 108 THR n 4 109 ALA n 4 110 GLN n 4 111 MET n 4 112 TRP n 4 113 TYR n 4 114 GLN n 4 115 GLN n 4 116 GLY n 4 117 PHE n 4 118 ARG n 4 119 SER n 4 120 LEU n 4 121 GLU n 4 122 ASP n 4 123 ILE n 4 124 ARG n 4 125 SER n 4 126 GLN n 4 127 ALA n 4 128 SER n 4 129 LEU n 4 130 THR n 4 131 THR n 4 132 GLN n 4 133 GLN n 4 134 ALA n 4 135 ILE n 4 136 GLY n 4 137 LEU n 4 138 LYS n 4 139 HIS n 4 140 TYR n 4 141 SER n 4 142 ASP n 4 143 PHE n 4 144 LEU n 4 145 GLU n 4 146 ARG n 4 147 MET n 4 148 PRO n 4 149 ARG n 4 150 GLU n 4 151 GLU n 4 152 ALA n 4 153 THR n 4 154 GLU n 4 155 ILE n 4 156 GLU n 4 157 GLN n 4 158 THR n 4 159 VAL n 4 160 GLN n 4 161 LYS n 4 162 ALA n 4 163 ALA n 4 164 GLN n 4 165 ALA n 4 166 PHE n 4 167 ASN n 4 168 SER n 4 169 GLY n 4 170 LEU n 4 171 LEU n 4 172 CYS n 4 173 VAL n 4 174 ALA n 4 175 CYS n 4 176 GLY n 4 177 SER n 4 178 TYR n 4 179 ARG n 4 180 ARG n 4 181 GLY n 4 182 LYS n 4 183 ALA n 4 184 THR n 4 185 CYS n 4 186 GLY n 4 187 ASP n 4 188 VAL n 4 189 ASP n 4 190 VAL n 4 191 LEU n 4 192 ILE n 4 193 THR n 4 194 HIS n 4 195 PRO n 4 196 ASP n 4 197 GLY n 4 198 ARG n 4 199 SER n 4 200 HIS n 4 201 ARG n 4 202 GLY n 4 203 ILE n 4 204 PHE n 4 205 SER n 4 206 ARG n 4 207 LEU n 4 208 LEU n 4 209 ASP n 4 210 SER n 4 211 LEU n 4 212 ARG n 4 213 GLN n 4 214 GLU n 4 215 GLY n 4 216 PHE n 4 217 LEU n 4 218 THR n 4 219 ASP n 4 220 ASP n 4 221 LEU n 4 222 VAL n 4 223 SER n 4 224 GLN n 4 225 GLU n 4 226 GLU n 4 227 ASN n 4 228 GLY n 4 229 GLN n 4 230 GLN n 4 231 GLN n 4 232 LYS n 4 233 TYR n 4 234 LEU n 4 235 GLY n 4 236 VAL n 4 237 CYS n 4 238 ARG n 4 239 LEU n 4 240 PRO n 4 241 GLY n 4 242 PRO n 4 243 GLY n 4 244 ARG n 4 245 ARG n 4 246 HIS n 4 247 ARG n 4 248 ARG n 4 249 LEU n 4 250 ASP n 4 251 ILE n 4 252 ILE n 4 253 VAL n 4 254 VAL n 4 255 PRO n 4 256 TYR n 4 257 SER n 4 258 GLU n 4 259 PHE n 4 260 ALA n 4 261 CYS n 4 262 ALA n 4 263 LEU n 4 264 LEU n 4 265 TYR n 4 266 PHE n 4 267 THR n 4 268 GLY n 4 269 SER n 4 270 ALA n 4 271 HIS n 4 272 PHE n 4 273 ASN n 4 274 ARG n 4 275 SER n 4 276 MET n 4 277 ARG n 4 278 ALA n 4 279 LEU n 4 280 ALA n 4 281 LYS n 4 282 THR n 4 283 LYS n 4 284 GLY n 4 285 MET n 4 286 SER n 4 287 LEU n 4 288 SER n 4 289 GLU n 4 290 HIS n 4 291 ALA n 4 292 LEU n 4 293 SER n 4 294 THR n 4 295 ALA n 4 296 VAL n 4 297 VAL n 4 298 ARG n 4 299 ASN n 4 300 THR n 4 301 HIS n 4 302 GLY n 4 303 CYS n 4 304 LYS n 4 305 VAL n 4 306 GLY n 4 307 PRO n 4 308 GLY n 4 309 ARG n 4 310 VAL n 4 311 LEU n 4 312 PRO n 4 313 THR n 4 314 PRO n 4 315 THR n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 VAL n 4 320 PHE n 4 321 ARG n 4 322 LEU n 4 323 LEU n 4 324 GLY n 4 325 LEU n 4 326 PRO n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 ALA n 4 332 GLU n 4 333 ARG n 4 334 ASP n 4 335 TRP n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'L21-CodonPlus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLL_HUMAN Q9UGP5 4 ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPG PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFR LLGLPYREPAERDW ; 242 ? 2 PDB 2BCV 2BCV 1 ? ? ? 3 PDB 2BCV 2BCV 2 ? ? ? 4 PDB 2BCV 2BCV 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2BCV A 2 ? 335 ? Q9UGP5 242 ? 575 ? 242 575 2 2 2BCV D 1 ? 4 ? 2BCV 1 ? 4 ? 1 4 3 3 2BCV P 1 ? 6 ? 2BCV 1 ? 6 ? 1 6 4 4 2BCV T 1 ? 12 ? 2BCV 1 ? 12 ? 1 12 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2BCV _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9UGP5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'INITIATING METHIONINE' _struct_ref_seq_dif.pdbx_auth_seq_num 241 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 O2C 'RNA linking' . "3'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TTP non-polymer . "THYMIDINE-5'-TRIPHOSPHATE" ? 'C10 H17 N2 O14 P3' 482.168 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2BCV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_percent_sol 55.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details 'Sodium citrate, sodium cacodylate, 2-propanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Sodium citrate' ? ? ? 1 2 1 'sodium cacodylate' ? ? ? 1 3 1 2-propanol ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'Sodium citrate' ? ? ? 1 6 2 'sodium cacodylate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 92' _diffrn_detector.pdbx_collection_date 2005-08-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2BCV _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.00 _reflns.number_obs 34418 _reflns.number_all ? _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 19.9 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2BCV _refine.ls_number_reflns_obs 31915 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 372744.48 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.19 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 93.2 _refine.ls_R_factor_obs 0.204 _refine.ls_R_factor_all 0.205 _refine.ls_R_factor_R_work 0.204 _refine.ls_R_factor_R_free 0.232 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1598 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 37.5 _refine.aniso_B[1][1] -3.98 _refine.aniso_B[2][2] 6.88 _refine.aniso_B[3][3] -2.90 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.328083 _refine.solvent_model_param_bsol 54.7594 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 1RZT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2BCV _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.32 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2472 _refine_hist.pdbx_number_atoms_nucleic_acid 446 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 345 _refine_hist.number_atoms_total 3296 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 31.19 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.22 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.97 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.40 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.54 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work 4649 _refine_ls_shell.R_factor_R_work 0.28 _refine_ls_shell.percent_reflns_obs 86.9 _refine_ls_shell.R_factor_R_free 0.347 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 4.7 _refine_ls_shell.number_reflns_R_free 231 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 pars.file ion.top 'X-RAY DIFFRACTION' 5 ? tops.file 'X-RAY DIFFRACTION' # _struct.entry_id 2BCV _struct.title 'DNA polymerase lambda in complex with Dttp and a DNA duplex containing an unpaired Dtmp' _struct.pdbx_descriptor 'DNA polymerase lambda (E.C.2.7.7.7, E.C.4.2.99.-)/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BCV _struct_keywords.pdbx_keywords 'Transferase, Lyase/DNA' _struct_keywords.text 'misalignment, extrahelical, mutagenesis, mutation, deletion, streisinger, slippage, Transferase, Lyase-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 8 ? M N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR D 17 ? GLN D 30 ? THR A 257 GLN A 270 1 ? 14 HELX_P HELX_P2 2 ASP D 32 ? PHE D 49 ? ASP A 272 PHE A 289 1 ? 18 HELX_P HELX_P3 3 SER D 55 ? SER D 61 ? SER A 295 SER A 301 1 ? 7 HELX_P HELX_P4 4 GLY D 66 ? SER D 79 ? GLY A 306 SER A 319 1 ? 14 HELX_P HELX_P5 5 LEU D 82 ? ILE D 88 ? LEU A 322 ILE A 328 5 ? 7 HELX_P HELX_P6 6 SER D 91 ? ASN D 100 ? SER A 331 ASN A 340 1 ? 10 HELX_P HELX_P7 7 GLY D 105 ? GLN D 115 ? GLY A 345 GLN A 355 1 ? 11 HELX_P HELX_P8 8 SER D 119 ? ALA D 127 ? SER A 359 ALA A 367 1 ? 9 HELX_P HELX_P9 9 THR D 130 ? HIS D 139 ? THR A 370 HIS A 379 1 ? 10 HELX_P HELX_P10 10 SER D 141 ? GLU D 145 ? SER A 381 GLU A 385 5 ? 5 HELX_P HELX_P11 11 ARG D 149 ? ASN D 167 ? ARG A 389 ASN A 407 1 ? 19 HELX_P HELX_P12 12 CYS D 175 ? ARG D 180 ? CYS A 415 ARG A 420 1 ? 6 HELX_P HELX_P13 13 ILE D 203 ? GLU D 214 ? ILE A 443 GLU A 454 1 ? 12 HELX_P HELX_P14 14 PRO D 255 ? SER D 257 ? PRO A 495 SER A 497 5 ? 3 HELX_P HELX_P15 15 GLU D 258 ? GLY D 268 ? GLU A 498 GLY A 508 1 ? 11 HELX_P HELX_P16 16 SER D 269 ? LYS D 283 ? SER A 509 LYS A 523 1 ? 15 HELX_P HELX_P17 17 THR D 315 ? LEU D 323 ? THR A 555 LEU A 563 1 ? 9 HELX_P HELX_P18 18 GLU D 329 ? ASP D 334 ? GLU A 569 ASP A 574 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? E MG . MG ? ? ? 1_555 D ASP 187 OD2 ? ? A MG 576 A ASP 427 1_555 ? ? ? ? ? ? ? 2.047 ? metalc2 metalc ? ? E MG . MG ? ? ? 1_555 I TTP . O1A ? ? A MG 576 A TTP 580 1_555 ? ? ? ? ? ? ? 2.046 ? metalc3 metalc ? ? E MG . MG ? ? ? 1_555 I TTP . O1B ? ? A MG 576 A TTP 580 1_555 ? ? ? ? ? ? ? 2.075 ? metalc4 metalc ? ? E MG . MG ? ? ? 1_555 I TTP . O3G ? ? A MG 576 A TTP 580 1_555 ? ? ? ? ? ? ? 2.174 ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 D ASP 189 OD2 ? ? A MG 576 A ASP 429 1_555 ? ? ? ? ? ? ? 2.223 ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 576 A HOH 738 1_555 ? ? ? ? ? ? ? 2.094 ? metalc7 metalc ? ? F NA . NA ? ? ? 1_555 D SER 99 O ? ? A NA 577 A SER 339 1_555 ? ? ? ? ? ? ? 2.531 ? metalc8 metalc ? ? F NA . NA ? ? ? 1_555 D ALA 104 O ? ? A NA 577 A ALA 344 1_555 ? ? ? ? ? ? ? 2.442 ? metalc9 metalc ? ? F NA . NA ? ? ? 1_555 B DA 5 OP1 ? ? A NA 577 P DA 5 1_555 ? ? ? ? ? ? ? 2.481 ? metalc10 metalc ? ? F NA . NA ? ? ? 1_555 D ILE 101 O ? ? A NA 577 A ILE 341 1_555 ? ? ? ? ? ? ? 2.576 ? metalc11 metalc ? ? G NA . NA ? ? ? 1_555 D SER 223 O ? ? A NA 578 A SER 463 1_555 ? ? ? ? ? ? ? 2.480 ? metalc12 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 578 T HOH 46 1_555 ? ? ? ? ? ? ? 2.583 ? metalc13 metalc ? ? G NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 578 A HOH 721 1_555 ? ? ? ? ? ? ? 2.534 ? metalc14 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 578 T HOH 61 1_555 ? ? ? ? ? ? ? 2.341 ? metalc15 metalc ? ? H NA . NA ? ? ? 1_555 D ASP 189 OD1 ? ? A NA 579 A ASP 429 1_555 ? ? ? ? ? ? ? 2.380 ? metalc16 metalc ? ? H NA . NA ? ? ? 1_555 I TTP . O1A ? ? A NA 579 A TTP 580 1_555 ? ? ? ? ? ? ? 2.590 ? metalc17 metalc ? ? H NA . NA ? ? ? 1_555 D ASP 187 OD1 ? ? A NA 579 A ASP 427 1_555 ? ? ? ? ? ? ? 2.420 ? metalc18 metalc ? ? H NA . NA ? ? ? 1_555 D ASP 250 OD1 ? ? A NA 579 A ASP 490 1_555 ? ? ? ? ? ? ? 2.506 ? covale1 covale ? ? B DA 5 "O3'" ? ? ? 1_555 B O2C 6 P ? ? P DA 5 P O2C 6 1_555 ? ? ? ? ? ? ? 1.608 ? metalc19 metalc ? ? F NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 577 A HOH 581 1_555 ? ? ? ? ? ? ? 2.658 ? metalc20 metalc ? ? F NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 577 P HOH 109 1_555 ? ? ? ? ? ? ? 2.653 ? metalc21 metalc ? ? G NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 578 A HOH 754 1_555 ? ? ? ? ? ? ? 2.740 ? metalc22 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 578 T HOH 28 1_555 ? ? ? ? ? ? ? 2.985 ? metalc23 metalc ? ? H NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 579 P HOH 45 1_555 ? ? ? ? ? ? ? 2.702 ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 C DC 4 N3 ? ? D DG 1 T DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 C DC 4 O2 ? ? D DG 1 T DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 C DC 4 N4 ? ? D DG 1 T DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 3 N1 ? ? D DC 2 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 3 O6 ? ? D DC 2 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 3 N2 ? ? D DC 2 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 C DG 2 N1 ? ? D DC 3 T DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 C DG 2 O6 ? ? D DC 3 T DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 C DG 2 N2 ? ? D DC 3 T DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 C DC 1 N3 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 C DC 1 O2 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 C DC 1 N4 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? P DC 1 T DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? P DC 1 T DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? P DC 1 T DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 11 N3 ? ? P DA 2 T DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 11 O4 ? ? P DA 2 T DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 10 N3 ? ? P DG 3 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 10 O2 ? ? P DG 3 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 10 N4 ? ? P DG 3 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? P DT 4 T DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? P DT 4 T DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 8 N3 ? ? P DA 5 T DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 8 O4 ? ? P DA 5 T DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 268 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 508 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 269 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 509 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET D 147 ? PRO D 148 ? MET A 387 PRO A 388 A 2 THR D 184 ? CYS D 185 ? THR A 424 CYS A 425 B 1 LEU D 171 ? ALA D 174 ? LEU A 411 ALA A 414 B 2 ASP D 187 ? THR D 193 ? ASP A 427 THR A 433 B 3 ARG D 247 ? VAL D 253 ? ARG A 487 VAL A 493 B 4 LYS D 232 ? CYS D 237 ? LYS A 472 CYS A 477 B 5 LEU D 217 ? VAL D 222 ? LEU A 457 VAL A 462 C 1 SER D 286 ? LEU D 287 ? SER A 526 LEU A 527 C 2 LEU D 292 ? THR D 294 ? LEU A 532 THR A 534 C 3 ARG D 309 ? VAL D 310 ? ARG A 549 VAL A 550 D 1 VAL D 297 ? ARG D 298 ? VAL A 537 ARG A 538 D 2 LYS D 304 ? GLY D 306 ? LYS A 544 GLY A 546 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET D 147 ? N MET A 387 O CYS D 185 ? O CYS A 425 B 1 2 N VAL D 173 ? N VAL A 413 O LEU D 191 ? O LEU A 431 B 2 3 N ILE D 192 ? N ILE A 432 O ILE D 252 ? O ILE A 492 B 3 4 O ARG D 247 ? O ARG A 487 N CYS D 237 ? N CYS A 477 B 4 5 O VAL D 236 ? O VAL A 476 N THR D 218 ? N THR A 458 C 1 2 N SER D 286 ? N SER A 526 O SER D 293 ? O SER A 533 C 2 3 N THR D 294 ? N THR A 534 O ARG D 309 ? O ARG A 549 D 1 2 N VAL D 297 ? N VAL A 537 O GLY D 306 ? O GLY A 546 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A 576' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 577' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 578' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 579' AC5 Software ? ? ? ? 24 'BINDING SITE FOR RESIDUE TTP A 580' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP D 187 ? ASP A 427 . ? 1_555 ? 2 AC1 5 ASP D 189 ? ASP A 429 . ? 1_555 ? 3 AC1 5 NA H . ? NA A 579 . ? 1_555 ? 4 AC1 5 TTP I . ? TTP A 580 . ? 1_555 ? 5 AC1 5 HOH M . ? HOH A 738 . ? 1_555 ? 6 AC2 6 SER D 99 ? SER A 339 . ? 1_555 ? 7 AC2 6 ILE D 101 ? ILE A 341 . ? 1_555 ? 8 AC2 6 ALA D 104 ? ALA A 344 . ? 1_555 ? 9 AC2 6 HOH M . ? HOH A 581 . ? 1_555 ? 10 AC2 6 DA B 5 ? DA P 5 . ? 1_555 ? 11 AC2 6 HOH K . ? HOH P 109 . ? 1_555 ? 12 AC3 6 SER D 223 ? SER A 463 . ? 1_555 ? 13 AC3 6 HOH M . ? HOH A 721 . ? 1_555 ? 14 AC3 6 HOH M . ? HOH A 754 . ? 1_555 ? 15 AC3 6 HOH L . ? HOH T 28 . ? 1_555 ? 16 AC3 6 HOH L . ? HOH T 46 . ? 1_555 ? 17 AC3 6 HOH L . ? HOH T 61 . ? 1_555 ? 18 AC4 6 ASP D 187 ? ASP A 427 . ? 1_555 ? 19 AC4 6 ASP D 189 ? ASP A 429 . ? 1_555 ? 20 AC4 6 ASP D 250 ? ASP A 490 . ? 1_555 ? 21 AC4 6 MG E . ? MG A 576 . ? 1_555 ? 22 AC4 6 TTP I . ? TTP A 580 . ? 1_555 ? 23 AC4 6 HOH K . ? HOH P 45 . ? 1_555 ? 24 AC5 24 ARG D 146 ? ARG A 386 . ? 1_555 ? 25 AC5 24 GLY D 176 ? GLY A 416 . ? 1_555 ? 26 AC5 24 SER D 177 ? SER A 417 . ? 1_555 ? 27 AC5 24 ARG D 180 ? ARG A 420 . ? 1_555 ? 28 AC5 24 GLY D 186 ? GLY A 426 . ? 1_555 ? 29 AC5 24 ASP D 187 ? ASP A 427 . ? 1_555 ? 30 AC5 24 ASP D 189 ? ASP A 429 . ? 1_555 ? 31 AC5 24 TYR D 265 ? TYR A 505 . ? 1_555 ? 32 AC5 24 PHE D 266 ? PHE A 506 . ? 1_555 ? 33 AC5 24 THR D 267 ? THR A 507 . ? 1_555 ? 34 AC5 24 GLY D 268 ? GLY A 508 . ? 1_555 ? 35 AC5 24 ALA D 270 ? ALA A 510 . ? 1_555 ? 36 AC5 24 ASN D 273 ? ASN A 513 . ? 1_555 ? 37 AC5 24 MG E . ? MG A 576 . ? 1_555 ? 38 AC5 24 NA H . ? NA A 579 . ? 1_555 ? 39 AC5 24 HOH M . ? HOH A 587 . ? 1_555 ? 40 AC5 24 HOH M . ? HOH A 715 . ? 1_555 ? 41 AC5 24 HOH M . ? HOH A 722 . ? 1_555 ? 42 AC5 24 HOH M . ? HOH A 723 . ? 1_555 ? 43 AC5 24 HOH M . ? HOH A 732 . ? 1_555 ? 44 AC5 24 HOH M . ? HOH A 738 . ? 1_555 ? 45 AC5 24 O2C B 6 ? O2C P 6 . ? 1_555 ? 46 AC5 24 HOH K . ? HOH P 45 . ? 1_555 ? 47 AC5 24 DA C 5 ? DA T 5 . ? 1_555 ? # _database_PDB_matrix.entry_id 2BCV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2BCV _atom_sites.fract_transf_matrix[1][1] 0.018136 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015876 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007045 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G D . n A 1 2 DC 2 2 2 DC C D . n A 1 3 DC 3 3 3 DC C D . n A 1 4 DG 4 4 4 DG G D . n B 2 1 DC 1 1 1 DC C P . n B 2 2 DA 2 2 2 DA A P . n B 2 3 DG 3 3 3 DG G P . n B 2 4 DT 4 4 4 DT T P . n B 2 5 DA 5 5 5 DA A P . n B 2 6 O2C 6 6 6 O2C O2C P . n C 3 1 DC 1 1 1 DC C T . n C 3 2 DG 2 2 2 DG G T . n C 3 3 DG 3 3 3 DG G T . n C 3 4 DC 4 4 4 DC C T . n C 3 5 DA 5 5 5 DA A T . n C 3 6 DG 6 6 6 DG G T . n C 3 7 DT 7 7 7 DT T T . n C 3 8 DT 8 8 8 DT T T . n C 3 9 DA 9 9 9 DA A T . n C 3 10 DC 10 10 10 DC C T . n C 3 11 DT 11 11 11 DT T T . n C 3 12 DG 12 12 12 DG G T . n D 4 1 MET 1 241 ? ? ? A . n D 4 2 ALA 2 242 ? ? ? A . n D 4 3 GLN 3 243 ? ? ? A . n D 4 4 PRO 4 244 ? ? ? A . n D 4 5 SER 5 245 ? ? ? A . n D 4 6 SER 6 246 ? ? ? A . n D 4 7 GLN 7 247 ? ? ? A . n D 4 8 LYS 8 248 ? ? ? A . n D 4 9 ALA 9 249 ? ? ? A . n D 4 10 THR 10 250 ? ? ? A . n D 4 11 ASN 11 251 ? ? ? A . n D 4 12 HIS 12 252 ? ? ? A . n D 4 13 ASN 13 253 253 ASN ASN A . n D 4 14 LEU 14 254 254 LEU LEU A . n D 4 15 HIS 15 255 255 HIS HIS A . n D 4 16 ILE 16 256 256 ILE ILE A . n D 4 17 THR 17 257 257 THR THR A . n D 4 18 GLU 18 258 258 GLU GLU A . n D 4 19 LYS 19 259 259 LYS LYS A . n D 4 20 LEU 20 260 260 LEU LEU A . n D 4 21 GLU 21 261 261 GLU GLU A . n D 4 22 VAL 22 262 262 VAL VAL A . n D 4 23 LEU 23 263 263 LEU LEU A . n D 4 24 ALA 24 264 264 ALA ALA A . n D 4 25 LYS 25 265 265 LYS LYS A . n D 4 26 ALA 26 266 266 ALA ALA A . n D 4 27 TYR 27 267 267 TYR TYR A . n D 4 28 SER 28 268 268 SER SER A . n D 4 29 VAL 29 269 269 VAL VAL A . n D 4 30 GLN 30 270 270 GLN GLN A . n D 4 31 GLY 31 271 271 GLY GLY A . n D 4 32 ASP 32 272 272 ASP ASP A . n D 4 33 LYS 33 273 273 LYS LYS A . n D 4 34 TRP 34 274 274 TRP TRP A . n D 4 35 ARG 35 275 275 ARG ARG A . n D 4 36 ALA 36 276 276 ALA ALA A . n D 4 37 LEU 37 277 277 LEU LEU A . n D 4 38 GLY 38 278 278 GLY GLY A . n D 4 39 TYR 39 279 279 TYR TYR A . n D 4 40 ALA 40 280 280 ALA ALA A . n D 4 41 LYS 41 281 281 LYS LYS A . n D 4 42 ALA 42 282 282 ALA ALA A . n D 4 43 ILE 43 283 283 ILE ILE A . n D 4 44 ASN 44 284 284 ASN ASN A . n D 4 45 ALA 45 285 285 ALA ALA A . n D 4 46 LEU 46 286 286 LEU LEU A . n D 4 47 LYS 47 287 287 LYS LYS A . n D 4 48 SER 48 288 288 SER SER A . n D 4 49 PHE 49 289 289 PHE PHE A . n D 4 50 HIS 50 290 290 HIS HIS A . n D 4 51 LYS 51 291 291 LYS LYS A . n D 4 52 PRO 52 292 292 PRO PRO A . n D 4 53 VAL 53 293 293 VAL VAL A . n D 4 54 THR 54 294 294 THR THR A . n D 4 55 SER 55 295 295 SER SER A . n D 4 56 TYR 56 296 296 TYR TYR A . n D 4 57 GLN 57 297 297 GLN GLN A . n D 4 58 GLU 58 298 298 GLU GLU A . n D 4 59 ALA 59 299 299 ALA ALA A . n D 4 60 CYS 60 300 300 CYS CYS A . n D 4 61 SER 61 301 301 SER SER A . n D 4 62 ILE 62 302 302 ILE ILE A . n D 4 63 PRO 63 303 303 PRO PRO A . n D 4 64 GLY 64 304 304 GLY GLY A . n D 4 65 ILE 65 305 305 ILE ILE A . n D 4 66 GLY 66 306 306 GLY GLY A . n D 4 67 LYS 67 307 307 LYS LYS A . n D 4 68 ARG 68 308 308 ARG ARG A . n D 4 69 MET 69 309 309 MET MET A . n D 4 70 ALA 70 310 310 ALA ALA A . n D 4 71 GLU 71 311 311 GLU GLU A . n D 4 72 LYS 72 312 312 LYS LYS A . n D 4 73 ILE 73 313 313 ILE ILE A . n D 4 74 ILE 74 314 314 ILE ILE A . n D 4 75 GLU 75 315 315 GLU GLU A . n D 4 76 ILE 76 316 316 ILE ILE A . n D 4 77 LEU 77 317 317 LEU LEU A . n D 4 78 GLU 78 318 318 GLU GLU A . n D 4 79 SER 79 319 319 SER SER A . n D 4 80 GLY 80 320 320 GLY GLY A . n D 4 81 HIS 81 321 321 HIS HIS A . n D 4 82 LEU 82 322 322 LEU LEU A . n D 4 83 ARG 83 323 323 ARG ARG A . n D 4 84 LYS 84 324 324 LYS LYS A . n D 4 85 LEU 85 325 325 LEU LEU A . n D 4 86 ASP 86 326 326 ASP ASP A . n D 4 87 HIS 87 327 327 HIS HIS A . n D 4 88 ILE 88 328 328 ILE ILE A . n D 4 89 SER 89 329 329 SER SER A . n D 4 90 GLU 90 330 330 GLU GLU A . n D 4 91 SER 91 331 331 SER SER A . n D 4 92 VAL 92 332 332 VAL VAL A . n D 4 93 PRO 93 333 333 PRO PRO A . n D 4 94 VAL 94 334 334 VAL VAL A . n D 4 95 LEU 95 335 335 LEU LEU A . n D 4 96 GLU 96 336 336 GLU GLU A . n D 4 97 LEU 97 337 337 LEU LEU A . n D 4 98 PHE 98 338 338 PHE PHE A . n D 4 99 SER 99 339 339 SER SER A . n D 4 100 ASN 100 340 340 ASN ASN A . n D 4 101 ILE 101 341 341 ILE ILE A . n D 4 102 TRP 102 342 342 TRP TRP A . n D 4 103 GLY 103 343 343 GLY GLY A . n D 4 104 ALA 104 344 344 ALA ALA A . n D 4 105 GLY 105 345 345 GLY GLY A . n D 4 106 THR 106 346 346 THR THR A . n D 4 107 LYS 107 347 347 LYS LYS A . n D 4 108 THR 108 348 348 THR THR A . n D 4 109 ALA 109 349 349 ALA ALA A . n D 4 110 GLN 110 350 350 GLN GLN A . n D 4 111 MET 111 351 351 MET MET A . n D 4 112 TRP 112 352 352 TRP TRP A . n D 4 113 TYR 113 353 353 TYR TYR A . n D 4 114 GLN 114 354 354 GLN GLN A . n D 4 115 GLN 115 355 355 GLN GLN A . n D 4 116 GLY 116 356 356 GLY GLY A . n D 4 117 PHE 117 357 357 PHE PHE A . n D 4 118 ARG 118 358 358 ARG ARG A . n D 4 119 SER 119 359 359 SER SER A . n D 4 120 LEU 120 360 360 LEU LEU A . n D 4 121 GLU 121 361 361 GLU GLU A . n D 4 122 ASP 122 362 362 ASP ASP A . n D 4 123 ILE 123 363 363 ILE ILE A . n D 4 124 ARG 124 364 364 ARG ARG A . n D 4 125 SER 125 365 365 SER SER A . n D 4 126 GLN 126 366 366 GLN GLN A . n D 4 127 ALA 127 367 367 ALA ALA A . n D 4 128 SER 128 368 368 SER SER A . n D 4 129 LEU 129 369 369 LEU LEU A . n D 4 130 THR 130 370 370 THR THR A . n D 4 131 THR 131 371 371 THR THR A . n D 4 132 GLN 132 372 372 GLN GLN A . n D 4 133 GLN 133 373 373 GLN GLN A . n D 4 134 ALA 134 374 374 ALA ALA A . n D 4 135 ILE 135 375 375 ILE ILE A . n D 4 136 GLY 136 376 376 GLY GLY A . n D 4 137 LEU 137 377 377 LEU LEU A . n D 4 138 LYS 138 378 378 LYS LYS A . n D 4 139 HIS 139 379 379 HIS HIS A . n D 4 140 TYR 140 380 380 TYR TYR A . n D 4 141 SER 141 381 381 SER SER A . n D 4 142 ASP 142 382 382 ASP ASP A . n D 4 143 PHE 143 383 383 PHE PHE A . n D 4 144 LEU 144 384 384 LEU LEU A . n D 4 145 GLU 145 385 385 GLU GLU A . n D 4 146 ARG 146 386 386 ARG ARG A . n D 4 147 MET 147 387 387 MET MET A . n D 4 148 PRO 148 388 388 PRO PRO A . n D 4 149 ARG 149 389 389 ARG ARG A . n D 4 150 GLU 150 390 390 GLU GLU A . n D 4 151 GLU 151 391 391 GLU GLU A . n D 4 152 ALA 152 392 392 ALA ALA A . n D 4 153 THR 153 393 393 THR THR A . n D 4 154 GLU 154 394 394 GLU GLU A . n D 4 155 ILE 155 395 395 ILE ILE A . n D 4 156 GLU 156 396 396 GLU GLU A . n D 4 157 GLN 157 397 397 GLN GLN A . n D 4 158 THR 158 398 398 THR THR A . n D 4 159 VAL 159 399 399 VAL VAL A . n D 4 160 GLN 160 400 400 GLN GLN A . n D 4 161 LYS 161 401 401 LYS LYS A . n D 4 162 ALA 162 402 402 ALA ALA A . n D 4 163 ALA 163 403 403 ALA ALA A . n D 4 164 GLN 164 404 404 GLN GLN A . n D 4 165 ALA 165 405 405 ALA ALA A . n D 4 166 PHE 166 406 406 PHE PHE A . n D 4 167 ASN 167 407 407 ASN ASN A . n D 4 168 SER 168 408 408 SER SER A . n D 4 169 GLY 169 409 409 GLY GLY A . n D 4 170 LEU 170 410 410 LEU LEU A . n D 4 171 LEU 171 411 411 LEU LEU A . n D 4 172 CYS 172 412 412 CYS CYS A . n D 4 173 VAL 173 413 413 VAL VAL A . n D 4 174 ALA 174 414 414 ALA ALA A . n D 4 175 CYS 175 415 415 CYS CYS A . n D 4 176 GLY 176 416 416 GLY GLY A . n D 4 177 SER 177 417 417 SER SER A . n D 4 178 TYR 178 418 418 TYR TYR A . n D 4 179 ARG 179 419 419 ARG ARG A . n D 4 180 ARG 180 420 420 ARG ARG A . n D 4 181 GLY 181 421 421 GLY GLY A . n D 4 182 LYS 182 422 422 LYS LYS A . n D 4 183 ALA 183 423 423 ALA ALA A . n D 4 184 THR 184 424 424 THR THR A . n D 4 185 CYS 185 425 425 CYS CYS A . n D 4 186 GLY 186 426 426 GLY GLY A . n D 4 187 ASP 187 427 427 ASP ASP A . n D 4 188 VAL 188 428 428 VAL VAL A . n D 4 189 ASP 189 429 429 ASP ASP A . n D 4 190 VAL 190 430 430 VAL VAL A . n D 4 191 LEU 191 431 431 LEU LEU A . n D 4 192 ILE 192 432 432 ILE ILE A . n D 4 193 THR 193 433 433 THR THR A . n D 4 194 HIS 194 434 434 HIS HIS A . n D 4 195 PRO 195 435 435 PRO PRO A . n D 4 196 ASP 196 436 436 ASP ASP A . n D 4 197 GLY 197 437 437 GLY GLY A . n D 4 198 ARG 198 438 438 ARG ARG A . n D 4 199 SER 199 439 439 SER SER A . n D 4 200 HIS 200 440 440 HIS HIS A . n D 4 201 ARG 201 441 441 ARG ARG A . n D 4 202 GLY 202 442 442 GLY GLY A . n D 4 203 ILE 203 443 443 ILE ILE A . n D 4 204 PHE 204 444 444 PHE PHE A . n D 4 205 SER 205 445 445 SER SER A . n D 4 206 ARG 206 446 446 ARG ARG A . n D 4 207 LEU 207 447 447 LEU LEU A . n D 4 208 LEU 208 448 448 LEU LEU A . n D 4 209 ASP 209 449 449 ASP ASP A . n D 4 210 SER 210 450 450 SER SER A . n D 4 211 LEU 211 451 451 LEU LEU A . n D 4 212 ARG 212 452 452 ARG ARG A . n D 4 213 GLN 213 453 453 GLN GLN A . n D 4 214 GLU 214 454 454 GLU GLU A . n D 4 215 GLY 215 455 455 GLY GLY A . n D 4 216 PHE 216 456 456 PHE PHE A . n D 4 217 LEU 217 457 457 LEU LEU A . n D 4 218 THR 218 458 458 THR THR A . n D 4 219 ASP 219 459 459 ASP ASP A . n D 4 220 ASP 220 460 460 ASP ASP A . n D 4 221 LEU 221 461 461 LEU LEU A . n D 4 222 VAL 222 462 462 VAL VAL A . n D 4 223 SER 223 463 463 SER SER A . n D 4 224 GLN 224 464 464 GLN GLN A . n D 4 225 GLU 225 465 465 GLU GLU A . n D 4 226 GLU 226 466 466 GLU GLU A . n D 4 227 ASN 227 467 467 ASN ASN A . n D 4 228 GLY 228 468 468 GLY GLY A . n D 4 229 GLN 229 469 469 GLN GLN A . n D 4 230 GLN 230 470 470 GLN GLN A . n D 4 231 GLN 231 471 471 GLN GLN A . n D 4 232 LYS 232 472 472 LYS LYS A . n D 4 233 TYR 233 473 473 TYR TYR A . n D 4 234 LEU 234 474 474 LEU LEU A . n D 4 235 GLY 235 475 475 GLY GLY A . n D 4 236 VAL 236 476 476 VAL VAL A . n D 4 237 CYS 237 477 477 CYS CYS A . n D 4 238 ARG 238 478 478 ARG ARG A . n D 4 239 LEU 239 479 479 LEU LEU A . n D 4 240 PRO 240 480 480 PRO PRO A . n D 4 241 GLY 241 481 481 GLY GLY A . n D 4 242 PRO 242 482 482 PRO PRO A . n D 4 243 GLY 243 483 483 GLY GLY A . n D 4 244 ARG 244 484 484 ARG ARG A . n D 4 245 ARG 245 485 485 ARG ARG A . n D 4 246 HIS 246 486 486 HIS HIS A . n D 4 247 ARG 247 487 487 ARG ARG A . n D 4 248 ARG 248 488 488 ARG ARG A . n D 4 249 LEU 249 489 489 LEU LEU A . n D 4 250 ASP 250 490 490 ASP ASP A . n D 4 251 ILE 251 491 491 ILE ILE A . n D 4 252 ILE 252 492 492 ILE ILE A . n D 4 253 VAL 253 493 493 VAL VAL A . n D 4 254 VAL 254 494 494 VAL VAL A . n D 4 255 PRO 255 495 495 PRO PRO A . n D 4 256 TYR 256 496 496 TYR TYR A . n D 4 257 SER 257 497 497 SER SER A . n D 4 258 GLU 258 498 498 GLU GLU A . n D 4 259 PHE 259 499 499 PHE PHE A . n D 4 260 ALA 260 500 500 ALA ALA A . n D 4 261 CYS 261 501 501 CYS CYS A . n D 4 262 ALA 262 502 502 ALA ALA A . n D 4 263 LEU 263 503 503 LEU LEU A . n D 4 264 LEU 264 504 504 LEU LEU A . n D 4 265 TYR 265 505 505 TYR TYR A . n D 4 266 PHE 266 506 506 PHE PHE A . n D 4 267 THR 267 507 507 THR THR A . n D 4 268 GLY 268 508 508 GLY GLY A . n D 4 269 SER 269 509 509 SER SER A . n D 4 270 ALA 270 510 510 ALA ALA A . n D 4 271 HIS 271 511 511 HIS HIS A . n D 4 272 PHE 272 512 512 PHE PHE A . n D 4 273 ASN 273 513 513 ASN ASN A . n D 4 274 ARG 274 514 514 ARG ARG A . n D 4 275 SER 275 515 515 SER SER A . n D 4 276 MET 276 516 516 MET MET A . n D 4 277 ARG 277 517 517 ARG ARG A . n D 4 278 ALA 278 518 518 ALA ALA A . n D 4 279 LEU 279 519 519 LEU LEU A . n D 4 280 ALA 280 520 520 ALA ALA A . n D 4 281 LYS 281 521 521 LYS LYS A . n D 4 282 THR 282 522 522 THR THR A . n D 4 283 LYS 283 523 523 LYS LYS A . n D 4 284 GLY 284 524 524 GLY GLY A . n D 4 285 MET 285 525 525 MET MET A . n D 4 286 SER 286 526 526 SER SER A . n D 4 287 LEU 287 527 527 LEU LEU A . n D 4 288 SER 288 528 528 SER SER A . n D 4 289 GLU 289 529 529 GLU GLU A . n D 4 290 HIS 290 530 530 HIS HIS A . n D 4 291 ALA 291 531 531 ALA ALA A . n D 4 292 LEU 292 532 532 LEU LEU A . n D 4 293 SER 293 533 533 SER SER A . n D 4 294 THR 294 534 534 THR THR A . n D 4 295 ALA 295 535 535 ALA ALA A . n D 4 296 VAL 296 536 536 VAL VAL A . n D 4 297 VAL 297 537 537 VAL VAL A . n D 4 298 ARG 298 538 538 ARG ARG A . n D 4 299 ASN 299 539 539 ASN ASN A . n D 4 300 THR 300 540 540 THR THR A . n D 4 301 HIS 301 541 541 HIS HIS A . n D 4 302 GLY 302 542 542 GLY GLY A . n D 4 303 CYS 303 543 543 CYS CYS A . n D 4 304 LYS 304 544 544 LYS LYS A . n D 4 305 VAL 305 545 545 VAL VAL A . n D 4 306 GLY 306 546 546 GLY GLY A . n D 4 307 PRO 307 547 547 PRO PRO A . n D 4 308 GLY 308 548 548 GLY GLY A . n D 4 309 ARG 309 549 549 ARG ARG A . n D 4 310 VAL 310 550 550 VAL VAL A . n D 4 311 LEU 311 551 551 LEU LEU A . n D 4 312 PRO 312 552 552 PRO PRO A . n D 4 313 THR 313 553 553 THR THR A . n D 4 314 PRO 314 554 554 PRO PRO A . n D 4 315 THR 315 555 555 THR THR A . n D 4 316 GLU 316 556 556 GLU GLU A . n D 4 317 LYS 317 557 557 LYS LYS A . n D 4 318 ASP 318 558 558 ASP ASP A . n D 4 319 VAL 319 559 559 VAL VAL A . n D 4 320 PHE 320 560 560 PHE PHE A . n D 4 321 ARG 321 561 561 ARG ARG A . n D 4 322 LEU 322 562 562 LEU LEU A . n D 4 323 LEU 323 563 563 LEU LEU A . n D 4 324 GLY 324 564 564 GLY GLY A . n D 4 325 LEU 325 565 565 LEU LEU A . n D 4 326 PRO 326 566 566 PRO PRO A . n D 4 327 TYR 327 567 567 TYR TYR A . n D 4 328 ARG 328 568 568 ARG ARG A . n D 4 329 GLU 329 569 569 GLU GLU A . n D 4 330 PRO 330 570 570 PRO PRO A . n D 4 331 ALA 331 571 571 ALA ALA A . n D 4 332 GLU 332 572 572 GLU GLU A . n D 4 333 ARG 333 573 573 ARG ARG A . n D 4 334 ASP 334 574 574 ASP ASP A . n D 4 335 TRP 335 575 575 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 576 400 MG MG A . F 6 NA 1 577 401 NA NA A . G 6 NA 1 578 402 NA NA A . H 6 NA 1 579 403 NA NA A . I 7 TTP 1 580 438 TTP TTP A . J 8 HOH 1 137 137 HOH HOH D . J 8 HOH 2 142 142 HOH HOH D . J 8 HOH 3 143 143 HOH HOH D . J 8 HOH 4 264 264 HOH HOH D . J 8 HOH 5 277 277 HOH HOH D . J 8 HOH 6 286 286 HOH HOH D . J 8 HOH 7 316 316 HOH HOH D . J 8 HOH 8 317 317 HOH HOH D . J 8 HOH 9 318 318 HOH HOH D . J 8 HOH 10 319 319 HOH HOH D . J 8 HOH 11 320 320 HOH HOH D . J 8 HOH 12 335 335 HOH HOH D . K 8 HOH 1 12 12 HOH HOH P . K 8 HOH 2 15 15 HOH HOH P . K 8 HOH 3 18 18 HOH HOH P . K 8 HOH 4 19 19 HOH HOH P . K 8 HOH 5 27 27 HOH HOH P . K 8 HOH 6 40 40 HOH HOH P . K 8 HOH 7 42 42 HOH HOH P . K 8 HOH 8 45 45 HOH HOH P . K 8 HOH 9 46 46 HOH HOH P . K 8 HOH 10 60 60 HOH HOH P . K 8 HOH 11 62 62 HOH HOH P . K 8 HOH 12 65 65 HOH HOH P . K 8 HOH 13 81 81 HOH HOH P . K 8 HOH 14 89 89 HOH HOH P . K 8 HOH 15 108 108 HOH HOH P . K 8 HOH 16 109 109 HOH HOH P . K 8 HOH 17 110 110 HOH HOH P . K 8 HOH 18 114 114 HOH HOH P . K 8 HOH 19 167 167 HOH HOH P . K 8 HOH 20 181 181 HOH HOH P . K 8 HOH 21 182 182 HOH HOH P . K 8 HOH 22 183 183 HOH HOH P . K 8 HOH 23 196 196 HOH HOH P . K 8 HOH 24 207 207 HOH HOH P . K 8 HOH 25 231 231 HOH HOH P . K 8 HOH 26 248 248 HOH HOH P . K 8 HOH 27 250 250 HOH HOH P . K 8 HOH 28 271 271 HOH HOH P . K 8 HOH 29 355 355 HOH HOH P . K 8 HOH 30 363 363 HOH HOH P . L 8 HOH 1 13 5 HOH HOH T . L 8 HOH 2 14 6 HOH HOH T . L 8 HOH 3 15 13 HOH HOH T . L 8 HOH 4 16 14 HOH HOH T . L 8 HOH 5 17 21 HOH HOH T . L 8 HOH 6 18 22 HOH HOH T . L 8 HOH 7 19 23 HOH HOH T . L 8 HOH 8 20 25 HOH HOH T . L 8 HOH 9 21 28 HOH HOH T . L 8 HOH 10 22 31 HOH HOH T . L 8 HOH 11 23 37 HOH HOH T . L 8 HOH 12 24 43 HOH HOH T . L 8 HOH 13 25 51 HOH HOH T . L 8 HOH 14 26 59 HOH HOH T . L 8 HOH 15 27 68 HOH HOH T . L 8 HOH 16 28 91 HOH HOH T . L 8 HOH 17 29 98 HOH HOH T . L 8 HOH 18 30 99 HOH HOH T . L 8 HOH 19 31 100 HOH HOH T . L 8 HOH 20 32 112 HOH HOH T . L 8 HOH 21 33 115 HOH HOH T . L 8 HOH 22 34 116 HOH HOH T . L 8 HOH 23 35 122 HOH HOH T . L 8 HOH 24 36 125 HOH HOH T . L 8 HOH 25 37 129 HOH HOH T . L 8 HOH 26 38 133 HOH HOH T . L 8 HOH 27 39 134 HOH HOH T . L 8 HOH 28 40 138 HOH HOH T . L 8 HOH 29 41 140 HOH HOH T . L 8 HOH 30 42 146 HOH HOH T . L 8 HOH 31 43 156 HOH HOH T . L 8 HOH 32 44 159 HOH HOH T . L 8 HOH 33 45 163 HOH HOH T . L 8 HOH 34 46 164 HOH HOH T . L 8 HOH 35 47 168 HOH HOH T . L 8 HOH 36 48 169 HOH HOH T . L 8 HOH 37 49 175 HOH HOH T . L 8 HOH 38 50 179 HOH HOH T . L 8 HOH 39 51 191 HOH HOH T . L 8 HOH 40 52 206 HOH HOH T . L 8 HOH 41 53 208 HOH HOH T . L 8 HOH 42 54 209 HOH HOH T . L 8 HOH 43 55 210 HOH HOH T . L 8 HOH 44 56 215 HOH HOH T . L 8 HOH 45 57 216 HOH HOH T . L 8 HOH 46 58 218 HOH HOH T . L 8 HOH 47 59 230 HOH HOH T . L 8 HOH 48 60 235 HOH HOH T . L 8 HOH 49 61 241 HOH HOH T . L 8 HOH 50 62 252 HOH HOH T . L 8 HOH 51 63 302 HOH HOH T . L 8 HOH 52 64 327 HOH HOH T . L 8 HOH 53 65 341 HOH HOH T . M 8 HOH 1 581 1 HOH HOH A . M 8 HOH 2 582 3 HOH HOH A . M 8 HOH 3 583 4 HOH HOH A . M 8 HOH 4 584 7 HOH HOH A . M 8 HOH 5 585 8 HOH HOH A . M 8 HOH 6 586 9 HOH HOH A . M 8 HOH 7 587 10 HOH HOH A . M 8 HOH 8 588 11 HOH HOH A . M 8 HOH 9 589 16 HOH HOH A . M 8 HOH 10 590 17 HOH HOH A . M 8 HOH 11 591 20 HOH HOH A . M 8 HOH 12 592 24 HOH HOH A . M 8 HOH 13 593 26 HOH HOH A . M 8 HOH 14 594 29 HOH HOH A . M 8 HOH 15 595 30 HOH HOH A . M 8 HOH 16 596 32 HOH HOH A . M 8 HOH 17 597 33 HOH HOH A . M 8 HOH 18 598 34 HOH HOH A . M 8 HOH 19 599 35 HOH HOH A . M 8 HOH 20 600 36 HOH HOH A . M 8 HOH 21 601 38 HOH HOH A . M 8 HOH 22 602 39 HOH HOH A . M 8 HOH 23 603 41 HOH HOH A . M 8 HOH 24 604 44 HOH HOH A . M 8 HOH 25 605 47 HOH HOH A . M 8 HOH 26 606 48 HOH HOH A . M 8 HOH 27 607 49 HOH HOH A . M 8 HOH 28 608 50 HOH HOH A . M 8 HOH 29 609 52 HOH HOH A . M 8 HOH 30 610 53 HOH HOH A . M 8 HOH 31 611 54 HOH HOH A . M 8 HOH 32 612 55 HOH HOH A . M 8 HOH 33 613 56 HOH HOH A . M 8 HOH 34 614 57 HOH HOH A . M 8 HOH 35 615 58 HOH HOH A . M 8 HOH 36 616 61 HOH HOH A . M 8 HOH 37 617 63 HOH HOH A . M 8 HOH 38 618 64 HOH HOH A . M 8 HOH 39 619 66 HOH HOH A . M 8 HOH 40 620 67 HOH HOH A . M 8 HOH 41 621 69 HOH HOH A . M 8 HOH 42 622 70 HOH HOH A . M 8 HOH 43 623 71 HOH HOH A . M 8 HOH 44 624 72 HOH HOH A . M 8 HOH 45 625 73 HOH HOH A . M 8 HOH 46 626 74 HOH HOH A . M 8 HOH 47 627 75 HOH HOH A . M 8 HOH 48 628 76 HOH HOH A . M 8 HOH 49 629 77 HOH HOH A . M 8 HOH 50 630 78 HOH HOH A . M 8 HOH 51 631 79 HOH HOH A . M 8 HOH 52 632 80 HOH HOH A . M 8 HOH 53 633 82 HOH HOH A . M 8 HOH 54 634 83 HOH HOH A . M 8 HOH 55 635 84 HOH HOH A . M 8 HOH 56 636 85 HOH HOH A . M 8 HOH 57 637 86 HOH HOH A . M 8 HOH 58 638 87 HOH HOH A . M 8 HOH 59 639 88 HOH HOH A . M 8 HOH 60 640 90 HOH HOH A . M 8 HOH 61 641 92 HOH HOH A . M 8 HOH 62 642 93 HOH HOH A . M 8 HOH 63 643 94 HOH HOH A . M 8 HOH 64 644 95 HOH HOH A . M 8 HOH 65 645 96 HOH HOH A . M 8 HOH 66 646 97 HOH HOH A . M 8 HOH 67 647 101 HOH HOH A . M 8 HOH 68 648 102 HOH HOH A . M 8 HOH 69 649 103 HOH HOH A . M 8 HOH 70 650 104 HOH HOH A . M 8 HOH 71 651 105 HOH HOH A . M 8 HOH 72 652 106 HOH HOH A . M 8 HOH 73 653 107 HOH HOH A . M 8 HOH 74 654 111 HOH HOH A . M 8 HOH 75 655 113 HOH HOH A . M 8 HOH 76 656 117 HOH HOH A . M 8 HOH 77 657 118 HOH HOH A . M 8 HOH 78 658 119 HOH HOH A . M 8 HOH 79 659 120 HOH HOH A . M 8 HOH 80 660 123 HOH HOH A . M 8 HOH 81 661 124 HOH HOH A . M 8 HOH 82 662 126 HOH HOH A . M 8 HOH 83 663 127 HOH HOH A . M 8 HOH 84 664 128 HOH HOH A . M 8 HOH 85 665 130 HOH HOH A . M 8 HOH 86 666 131 HOH HOH A . M 8 HOH 87 667 132 HOH HOH A . M 8 HOH 88 668 135 HOH HOH A . M 8 HOH 89 669 136 HOH HOH A . M 8 HOH 90 670 139 HOH HOH A . M 8 HOH 91 671 141 HOH HOH A . M 8 HOH 92 672 144 HOH HOH A . M 8 HOH 93 673 145 HOH HOH A . M 8 HOH 94 674 147 HOH HOH A . M 8 HOH 95 675 148 HOH HOH A . M 8 HOH 96 676 149 HOH HOH A . M 8 HOH 97 677 150 HOH HOH A . M 8 HOH 98 678 151 HOH HOH A . M 8 HOH 99 679 152 HOH HOH A . M 8 HOH 100 680 153 HOH HOH A . M 8 HOH 101 681 154 HOH HOH A . M 8 HOH 102 682 155 HOH HOH A . M 8 HOH 103 683 157 HOH HOH A . M 8 HOH 104 684 158 HOH HOH A . M 8 HOH 105 685 161 HOH HOH A . M 8 HOH 106 686 165 HOH HOH A . M 8 HOH 107 687 166 HOH HOH A . M 8 HOH 108 688 170 HOH HOH A . M 8 HOH 109 689 171 HOH HOH A . M 8 HOH 110 690 172 HOH HOH A . M 8 HOH 111 691 173 HOH HOH A . M 8 HOH 112 692 174 HOH HOH A . M 8 HOH 113 693 176 HOH HOH A . M 8 HOH 114 694 177 HOH HOH A . M 8 HOH 115 695 178 HOH HOH A . M 8 HOH 116 696 180 HOH HOH A . M 8 HOH 117 697 184 HOH HOH A . M 8 HOH 118 698 185 HOH HOH A . M 8 HOH 119 699 186 HOH HOH A . M 8 HOH 120 700 187 HOH HOH A . M 8 HOH 121 701 188 HOH HOH A . M 8 HOH 122 702 189 HOH HOH A . M 8 HOH 123 703 190 HOH HOH A . M 8 HOH 124 704 192 HOH HOH A . M 8 HOH 125 705 193 HOH HOH A . M 8 HOH 126 706 194 HOH HOH A . M 8 HOH 127 707 195 HOH HOH A . M 8 HOH 128 708 199 HOH HOH A . M 8 HOH 129 709 200 HOH HOH A . M 8 HOH 130 710 201 HOH HOH A . M 8 HOH 131 711 202 HOH HOH A . M 8 HOH 132 712 203 HOH HOH A . M 8 HOH 133 713 204 HOH HOH A . M 8 HOH 134 714 205 HOH HOH A . M 8 HOH 135 715 211 HOH HOH A . M 8 HOH 136 716 212 HOH HOH A . M 8 HOH 137 717 213 HOH HOH A . M 8 HOH 138 718 214 HOH HOH A . M 8 HOH 139 719 217 HOH HOH A . M 8 HOH 140 720 219 HOH HOH A . M 8 HOH 141 721 220 HOH HOH A . M 8 HOH 142 722 221 HOH HOH A . M 8 HOH 143 723 222 HOH HOH A . M 8 HOH 144 724 223 HOH HOH A . M 8 HOH 145 725 224 HOH HOH A . M 8 HOH 146 726 225 HOH HOH A . M 8 HOH 147 727 226 HOH HOH A . M 8 HOH 148 728 227 HOH HOH A . M 8 HOH 149 729 228 HOH HOH A . M 8 HOH 150 730 229 HOH HOH A . M 8 HOH 151 731 232 HOH HOH A . M 8 HOH 152 732 233 HOH HOH A . M 8 HOH 153 733 234 HOH HOH A . M 8 HOH 154 734 236 HOH HOH A . M 8 HOH 155 735 237 HOH HOH A . M 8 HOH 156 736 238 HOH HOH A . M 8 HOH 157 737 239 HOH HOH A . M 8 HOH 158 738 240 HOH HOH A . M 8 HOH 159 739 242 HOH HOH A . M 8 HOH 160 740 243 HOH HOH A . M 8 HOH 161 741 244 HOH HOH A . M 8 HOH 162 742 245 HOH HOH A . M 8 HOH 163 743 246 HOH HOH A . M 8 HOH 164 744 247 HOH HOH A . M 8 HOH 165 745 249 HOH HOH A . M 8 HOH 166 746 251 HOH HOH A . M 8 HOH 167 747 253 HOH HOH A . M 8 HOH 168 748 254 HOH HOH A . M 8 HOH 169 749 255 HOH HOH A . M 8 HOH 170 750 256 HOH HOH A . M 8 HOH 171 751 257 HOH HOH A . M 8 HOH 172 752 258 HOH HOH A . M 8 HOH 173 753 259 HOH HOH A . M 8 HOH 174 754 260 HOH HOH A . M 8 HOH 175 755 261 HOH HOH A . M 8 HOH 176 756 262 HOH HOH A . M 8 HOH 177 757 265 HOH HOH A . M 8 HOH 178 758 266 HOH HOH A . M 8 HOH 179 759 267 HOH HOH A . M 8 HOH 180 760 268 HOH HOH A . M 8 HOH 181 761 269 HOH HOH A . M 8 HOH 182 762 270 HOH HOH A . M 8 HOH 183 763 272 HOH HOH A . M 8 HOH 184 764 273 HOH HOH A . M 8 HOH 185 765 274 HOH HOH A . M 8 HOH 186 766 275 HOH HOH A . M 8 HOH 187 767 276 HOH HOH A . M 8 HOH 188 768 278 HOH HOH A . M 8 HOH 189 769 280 HOH HOH A . M 8 HOH 190 770 281 HOH HOH A . M 8 HOH 191 771 282 HOH HOH A . M 8 HOH 192 772 283 HOH HOH A . M 8 HOH 193 773 284 HOH HOH A . M 8 HOH 194 774 285 HOH HOH A . M 8 HOH 195 775 287 HOH HOH A . M 8 HOH 196 776 288 HOH HOH A . M 8 HOH 197 777 291 HOH HOH A . M 8 HOH 198 778 292 HOH HOH A . M 8 HOH 199 779 293 HOH HOH A . M 8 HOH 200 780 294 HOH HOH A . M 8 HOH 201 781 297 HOH HOH A . M 8 HOH 202 782 298 HOH HOH A . M 8 HOH 203 783 299 HOH HOH A . M 8 HOH 204 784 300 HOH HOH A . M 8 HOH 205 785 301 HOH HOH A . M 8 HOH 206 786 304 HOH HOH A . M 8 HOH 207 787 305 HOH HOH A . M 8 HOH 208 788 306 HOH HOH A . M 8 HOH 209 789 307 HOH HOH A . M 8 HOH 210 790 308 HOH HOH A . M 8 HOH 211 791 309 HOH HOH A . M 8 HOH 212 792 310 HOH HOH A . M 8 HOH 213 793 311 HOH HOH A . M 8 HOH 214 794 312 HOH HOH A . M 8 HOH 215 795 313 HOH HOH A . M 8 HOH 216 796 314 HOH HOH A . M 8 HOH 217 797 315 HOH HOH A . M 8 HOH 218 798 321 HOH HOH A . M 8 HOH 219 799 322 HOH HOH A . M 8 HOH 220 800 326 HOH HOH A . M 8 HOH 221 801 328 HOH HOH A . M 8 HOH 222 802 332 HOH HOH A . M 8 HOH 223 803 334 HOH HOH A . M 8 HOH 224 804 336 HOH HOH A . M 8 HOH 225 805 337 HOH HOH A . M 8 HOH 226 806 339 HOH HOH A . M 8 HOH 227 807 340 HOH HOH A . M 8 HOH 228 808 342 HOH HOH A . M 8 HOH 229 809 344 HOH HOH A . M 8 HOH 230 810 345 HOH HOH A . M 8 HOH 231 811 346 HOH HOH A . M 8 HOH 232 812 347 HOH HOH A . M 8 HOH 233 813 348 HOH HOH A . M 8 HOH 234 814 349 HOH HOH A . M 8 HOH 235 815 351 HOH HOH A . M 8 HOH 236 816 354 HOH HOH A . M 8 HOH 237 817 356 HOH HOH A . M 8 HOH 238 818 357 HOH HOH A . M 8 HOH 239 819 358 HOH HOH A . M 8 HOH 240 820 359 HOH HOH A . M 8 HOH 241 821 360 HOH HOH A . M 8 HOH 242 822 361 HOH HOH A . M 8 HOH 243 823 364 HOH HOH A . M 8 HOH 244 824 366 HOH HOH A . M 8 HOH 245 825 368 HOH HOH A . M 8 HOH 246 826 369 HOH HOH A . M 8 HOH 247 827 370 HOH HOH A . M 8 HOH 248 828 371 HOH HOH A . M 8 HOH 249 829 372 HOH HOH A . M 8 HOH 250 830 373 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? D ASP 187 ? A ASP 427 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O1A ? I TTP . ? A TTP 580 ? 1_555 100.4 ? 2 OD2 ? D ASP 187 ? A ASP 427 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O1B ? I TTP . ? A TTP 580 ? 1_555 168.1 ? 3 O1A ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O1B ? I TTP . ? A TTP 580 ? 1_555 78.0 ? 4 OD2 ? D ASP 187 ? A ASP 427 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O3G ? I TTP . ? A TTP 580 ? 1_555 89.6 ? 5 O1A ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O3G ? I TTP . ? A TTP 580 ? 1_555 83.5 ? 6 O1B ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O3G ? I TTP . ? A TTP 580 ? 1_555 78.5 ? 7 OD2 ? D ASP 187 ? A ASP 427 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 105.8 ? 8 O1A ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 91.4 ? 9 O1B ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 86.1 ? 10 O3G ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 164.5 ? 11 OD2 ? D ASP 187 ? A ASP 427 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O ? M HOH . ? A HOH 738 ? 1_555 95.1 ? 12 O1A ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O ? M HOH . ? A HOH 738 ? 1_555 163.3 ? 13 O1B ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O ? M HOH . ? A HOH 738 ? 1_555 85.6 ? 14 O3G ? I TTP . ? A TTP 580 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O ? M HOH . ? A HOH 738 ? 1_555 90.6 ? 15 OD2 ? D ASP 189 ? A ASP 429 ? 1_555 MG ? E MG . ? A MG 576 ? 1_555 O ? M HOH . ? A HOH 738 ? 1_555 90.2 ? 16 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ALA 104 ? A ALA 344 ? 1_555 84.0 ? 17 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 OP1 ? B DA 5 ? P DA 5 ? 1_555 157.8 ? 18 O ? D ALA 104 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 OP1 ? B DA 5 ? P DA 5 ? 1_555 95.3 ? 19 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ILE 101 ? A ILE 341 ? 1_555 102.8 ? 20 O ? D ALA 104 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ILE 101 ? A ILE 341 ? 1_555 87.8 ? 21 OP1 ? B DA 5 ? P DA 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? D ILE 101 ? A ILE 341 ? 1_555 99.3 ? 22 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? M HOH . ? A HOH 581 ? 1_555 86.4 ? 23 O ? D ALA 104 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? M HOH . ? A HOH 581 ? 1_555 170.0 ? 24 OP1 ? B DA 5 ? P DA 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? M HOH . ? A HOH 581 ? 1_555 94.6 ? 25 O ? D ILE 101 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? M HOH . ? A HOH 581 ? 1_555 91.9 ? 26 O ? D SER 99 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? K HOH . ? P HOH 109 ? 1_555 70.3 ? 27 O ? D ALA 104 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? K HOH . ? P HOH 109 ? 1_555 87.8 ? 28 OP1 ? B DA 5 ? P DA 5 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? K HOH . ? P HOH 109 ? 1_555 87.5 ? 29 O ? D ILE 101 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? K HOH . ? P HOH 109 ? 1_555 172.2 ? 30 O ? M HOH . ? A HOH 581 ? 1_555 NA ? F NA . ? A NA 577 ? 1_555 O ? K HOH . ? P HOH 109 ? 1_555 91.2 ? 31 O ? D SER 223 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 46 ? 1_555 103.5 ? 32 O ? D SER 223 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? M HOH . ? A HOH 721 ? 1_555 81.4 ? 33 O ? L HOH . ? T HOH 46 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? M HOH . ? A HOH 721 ? 1_555 97.2 ? 34 O ? D SER 223 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 61 ? 1_555 161.9 ? 35 O ? L HOH . ? T HOH 46 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 61 ? 1_555 94.0 ? 36 O ? M HOH . ? A HOH 721 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 61 ? 1_555 92.2 ? 37 O ? D SER 223 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? M HOH . ? A HOH 754 ? 1_555 83.6 ? 38 O ? L HOH . ? T HOH 46 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? M HOH . ? A HOH 754 ? 1_555 172.5 ? 39 O ? M HOH . ? A HOH 721 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? M HOH . ? A HOH 754 ? 1_555 86.2 ? 40 O ? L HOH . ? T HOH 61 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? M HOH . ? A HOH 754 ? 1_555 79.1 ? 41 O ? D SER 223 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 28 ? 1_555 91.0 ? 42 O ? L HOH . ? T HOH 46 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 28 ? 1_555 98.7 ? 43 O ? M HOH . ? A HOH 721 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 28 ? 1_555 163.6 ? 44 O ? L HOH . ? T HOH 61 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 28 ? 1_555 90.6 ? 45 O ? M HOH . ? A HOH 754 ? 1_555 NA ? G NA . ? A NA 578 ? 1_555 O ? L HOH . ? T HOH 28 ? 1_555 78.5 ? 46 OD1 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 O1A ? I TTP . ? A TTP 580 ? 1_555 85.4 ? 47 OD1 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 91.0 ? 48 O1A ? I TTP . ? A TTP 580 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 100.2 ? 49 OD1 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 OD1 ? D ASP 250 ? A ASP 490 ? 1_555 80.3 ? 50 O1A ? I TTP . ? A TTP 580 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 OD1 ? D ASP 250 ? A ASP 490 ? 1_555 143.0 ? 51 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 OD1 ? D ASP 250 ? A ASP 490 ? 1_555 113.8 ? 52 OD1 ? D ASP 189 ? A ASP 429 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 O ? K HOH . ? P HOH 45 ? 1_555 161.8 ? 53 O1A ? I TTP . ? A TTP 580 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 O ? K HOH . ? P HOH 45 ? 1_555 77.3 ? 54 OD1 ? D ASP 187 ? A ASP 427 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 O ? K HOH . ? P HOH 45 ? 1_555 86.7 ? 55 OD1 ? D ASP 250 ? A ASP 490 ? 1_555 NA ? H NA . ? A NA 579 ? 1_555 O ? K HOH . ? P HOH 45 ? 1_555 117.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-03-07 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 STRUCTURE 'data reduction' STUDIO ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.521 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.086 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 254 ? ? 75.24 80.12 2 1 THR A 294 ? ? -145.49 45.16 3 1 SER A 295 ? ? -172.95 136.97 4 1 ASN A 407 ? ? -169.63 92.31 5 1 CYS A 415 ? ? -117.08 -142.42 6 1 ARG A 438 ? ? -144.61 -25.84 7 1 SER A 463 ? ? -162.49 88.72 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 255 ? CG ? D HIS 15 CG 2 1 Y 1 A HIS 255 ? ND1 ? D HIS 15 ND1 3 1 Y 1 A HIS 255 ? CD2 ? D HIS 15 CD2 4 1 Y 1 A HIS 255 ? CE1 ? D HIS 15 CE1 5 1 Y 1 A HIS 255 ? NE2 ? D HIS 15 NE2 6 1 Y 1 A ILE 256 ? CG1 ? D ILE 16 CG1 7 1 Y 1 A ILE 256 ? CG2 ? D ILE 16 CG2 8 1 Y 1 A ILE 256 ? CD1 ? D ILE 16 CD1 9 1 Y 1 A LYS 259 ? CG ? D LYS 19 CG 10 1 Y 1 A LYS 259 ? CD ? D LYS 19 CD 11 1 Y 1 A LYS 259 ? CE ? D LYS 19 CE 12 1 Y 1 A LYS 259 ? NZ ? D LYS 19 NZ 13 1 Y 1 A LYS 265 ? CG ? D LYS 25 CG 14 1 Y 1 A LYS 265 ? CD ? D LYS 25 CD 15 1 Y 1 A LYS 265 ? CE ? D LYS 25 CE 16 1 Y 1 A LYS 265 ? NZ ? D LYS 25 NZ 17 1 Y 1 A LYS 287 ? CG ? D LYS 47 CG 18 1 Y 1 A LYS 287 ? CD ? D LYS 47 CD 19 1 Y 1 A LYS 287 ? CE ? D LYS 47 CE 20 1 Y 1 A LYS 287 ? NZ ? D LYS 47 NZ 21 1 Y 1 A PHE 289 ? CG ? D PHE 49 CG 22 1 Y 1 A PHE 289 ? CD1 ? D PHE 49 CD1 23 1 Y 1 A PHE 289 ? CD2 ? D PHE 49 CD2 24 1 Y 1 A PHE 289 ? CE1 ? D PHE 49 CE1 25 1 Y 1 A PHE 289 ? CE2 ? D PHE 49 CE2 26 1 Y 1 A PHE 289 ? CZ ? D PHE 49 CZ 27 1 Y 1 A HIS 290 ? CG ? D HIS 50 CG 28 1 Y 1 A HIS 290 ? ND1 ? D HIS 50 ND1 29 1 Y 1 A HIS 290 ? CD2 ? D HIS 50 CD2 30 1 Y 1 A HIS 290 ? CE1 ? D HIS 50 CE1 31 1 Y 1 A HIS 290 ? NE2 ? D HIS 50 NE2 32 1 Y 1 A LYS 291 ? CG ? D LYS 51 CG 33 1 Y 1 A LYS 291 ? CD ? D LYS 51 CD 34 1 Y 1 A LYS 291 ? CE ? D LYS 51 CE 35 1 Y 1 A LYS 291 ? NZ ? D LYS 51 NZ 36 1 Y 1 A THR 294 ? OG1 ? D THR 54 OG1 37 1 Y 1 A THR 294 ? CG2 ? D THR 54 CG2 38 1 Y 1 A SER 295 ? OG ? D SER 55 OG 39 1 Y 1 A GLN 297 ? CG ? D GLN 57 CG 40 1 Y 1 A GLN 297 ? CD ? D GLN 57 CD 41 1 Y 1 A GLN 297 ? OE1 ? D GLN 57 OE1 42 1 Y 1 A GLN 297 ? NE2 ? D GLN 57 NE2 43 1 Y 1 A LYS 307 ? CG ? D LYS 67 CG 44 1 Y 1 A LYS 307 ? CD ? D LYS 67 CD 45 1 Y 1 A LYS 307 ? CE ? D LYS 67 CE 46 1 Y 1 A LYS 307 ? NZ ? D LYS 67 NZ 47 1 Y 1 A ILE 314 ? CG1 ? D ILE 74 CG1 48 1 Y 1 A ILE 314 ? CG2 ? D ILE 74 CG2 49 1 Y 1 A ILE 314 ? CD1 ? D ILE 74 CD1 50 1 Y 1 A ILE 316 ? CG1 ? D ILE 76 CG1 51 1 Y 1 A ILE 316 ? CG2 ? D ILE 76 CG2 52 1 Y 1 A ILE 316 ? CD1 ? D ILE 76 CD1 53 1 Y 1 A GLU 318 ? CG ? D GLU 78 CG 54 1 Y 1 A GLU 318 ? CD ? D GLU 78 CD 55 1 Y 1 A GLU 318 ? OE1 ? D GLU 78 OE1 56 1 Y 1 A GLU 318 ? OE2 ? D GLU 78 OE2 57 1 Y 1 A SER 319 ? OG ? D SER 79 OG 58 1 Y 1 A HIS 321 ? CG ? D HIS 81 CG 59 1 Y 1 A HIS 321 ? ND1 ? D HIS 81 ND1 60 1 Y 1 A HIS 321 ? CD2 ? D HIS 81 CD2 61 1 Y 1 A HIS 321 ? CE1 ? D HIS 81 CE1 62 1 Y 1 A HIS 321 ? NE2 ? D HIS 81 NE2 63 1 Y 1 A ARG 323 ? CG ? D ARG 83 CG 64 1 Y 1 A ARG 323 ? CD ? D ARG 83 CD 65 1 Y 1 A ARG 323 ? NE ? D ARG 83 NE 66 1 Y 1 A ARG 323 ? CZ ? D ARG 83 CZ 67 1 Y 1 A ARG 323 ? NH1 ? D ARG 83 NH1 68 1 Y 1 A ARG 323 ? NH2 ? D ARG 83 NH2 69 1 Y 1 A ASP 326 ? CG ? D ASP 86 CG 70 1 Y 1 A ASP 326 ? OD1 ? D ASP 86 OD1 71 1 Y 1 A ASP 326 ? OD2 ? D ASP 86 OD2 72 1 Y 1 A LYS 378 ? CG ? D LYS 138 CG 73 1 Y 1 A LYS 378 ? CD ? D LYS 138 CD 74 1 Y 1 A LYS 378 ? CE ? D LYS 138 CE 75 1 Y 1 A LYS 378 ? NZ ? D LYS 138 NZ 76 1 Y 1 A LYS 401 ? CG ? D LYS 161 CG 77 1 Y 1 A LYS 401 ? CD ? D LYS 161 CD 78 1 Y 1 A LYS 401 ? CE ? D LYS 161 CE 79 1 Y 1 A LYS 401 ? NZ ? D LYS 161 NZ 80 1 Y 1 A ARG 438 ? CG ? D ARG 198 CG 81 1 Y 1 A ARG 438 ? CD ? D ARG 198 CD 82 1 Y 1 A ARG 438 ? NE ? D ARG 198 NE 83 1 Y 1 A ARG 438 ? CZ ? D ARG 198 CZ 84 1 Y 1 A ARG 438 ? NH1 ? D ARG 198 NH1 85 1 Y 1 A ARG 438 ? NH2 ? D ARG 198 NH2 86 1 Y 1 A ARG 441 ? CG ? D ARG 201 CG 87 1 Y 1 A ARG 441 ? CD ? D ARG 201 CD 88 1 Y 1 A ARG 441 ? NE ? D ARG 201 NE 89 1 Y 1 A ARG 441 ? CZ ? D ARG 201 CZ 90 1 Y 1 A ARG 441 ? NH1 ? D ARG 201 NH1 91 1 Y 1 A ARG 441 ? NH2 ? D ARG 201 NH2 92 1 Y 1 A SER 445 ? OG ? D SER 205 OG 93 1 Y 1 A VAL 537 ? CG1 ? D VAL 297 CG1 94 1 Y 1 A VAL 537 ? CG2 ? D VAL 297 CG2 95 1 Y 1 A CYS 543 ? SG ? D CYS 303 SG 96 1 Y 1 A VAL 545 ? CG1 ? D VAL 305 CG1 97 1 Y 1 A VAL 545 ? CG2 ? D VAL 305 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 241 ? D MET 1 2 1 Y 1 A ALA 242 ? D ALA 2 3 1 Y 1 A GLN 243 ? D GLN 3 4 1 Y 1 A PRO 244 ? D PRO 4 5 1 Y 1 A SER 245 ? D SER 5 6 1 Y 1 A SER 246 ? D SER 6 7 1 Y 1 A GLN 247 ? D GLN 7 8 1 Y 1 A LYS 248 ? D LYS 8 9 1 Y 1 A ALA 249 ? D ALA 9 10 1 Y 1 A THR 250 ? D THR 10 11 1 Y 1 A ASN 251 ? D ASN 11 12 1 Y 1 A HIS 252 ? D HIS 12 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2BCV 'double helix' 2BCV 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 C DC 4 1_555 -0.376 -0.169 -0.015 -16.318 -8.502 1.382 1 D_DG1:DC4_T D 1 ? T 4 ? 19 1 1 A DC 2 1_555 C DG 3 1_555 0.018 -0.055 0.019 -5.288 0.047 -2.129 2 D_DC2:DG3_T D 2 ? T 3 ? 19 1 1 A DC 3 1_555 C DG 2 1_555 0.151 -0.131 -0.131 -0.946 -1.799 1.135 3 D_DC3:DG2_T D 3 ? T 2 ? 19 1 1 A DG 4 1_555 C DC 1 1_555 -0.155 -0.230 0.207 13.501 -3.916 -2.416 4 D_DG4:DC1_T D 4 ? T 1 ? 19 1 1 B DC 1 1_555 C DG 12 1_555 0.159 -0.094 0.440 -22.296 -13.513 1.801 5 P_DC1:DG12_T P 1 ? T 12 ? 19 1 1 B DA 2 1_555 C DT 11 1_555 0.001 -0.133 0.139 -4.677 -7.816 2.057 6 P_DA2:DT11_T P 2 ? T 11 ? 20 1 1 B DG 3 1_555 C DC 10 1_555 -0.240 -0.146 0.128 -1.355 -6.839 -1.294 7 P_DG3:DC10_T P 3 ? T 10 ? 19 1 1 B DT 4 1_555 C DA 9 1_555 0.168 -0.052 -0.223 11.394 -0.640 0.628 8 P_DT4:DA9_T P 4 ? T 9 ? 20 1 1 B DA 5 1_555 C DT 8 1_555 0.094 -0.155 0.170 -0.629 -22.094 0.844 9 P_DA5:DT8_T P 5 ? T 8 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 C DC 4 1_555 A DC 2 1_555 C DG 3 1_555 -0.526 -0.793 3.115 1.542 8.303 33.489 -2.523 1.108 2.817 14.131 -2.625 34.508 1 DD_DG1DC2:DG3DC4_TT D 1 ? T 4 ? D 2 ? T 3 ? 1 A DC 2 1_555 C DG 3 1_555 A DC 3 1_555 C DG 2 1_555 0.859 -0.018 3.236 4.931 0.950 36.373 -0.160 -0.686 3.319 1.512 -7.853 36.707 2 DD_DC2DC3:DG2DG3_TT D 2 ? T 3 ? D 3 ? T 2 ? 1 A DC 3 1_555 C DG 2 1_555 A DG 4 1_555 C DC 1 1_555 -1.083 0.152 3.007 -4.022 5.717 27.044 -0.976 1.337 3.098 11.973 8.422 27.916 3 DD_DC3DG4:DC1DG2_TT D 3 ? T 2 ? D 4 ? T 1 ? 1 B DC 1 1_555 C DG 12 1_555 B DA 2 1_555 C DT 11 1_555 -0.263 0.787 2.925 2.580 12.594 32.562 -0.475 0.804 2.989 21.448 -4.394 34.944 4 PP_DC1DA2:DT11DG12_TT P 1 ? T 12 ? P 2 ? T 11 ? 1 B DA 2 1_555 C DT 11 1_555 B DG 3 1_555 C DC 10 1_555 0.330 -0.636 3.221 -1.106 0.507 30.100 -1.325 -0.857 3.197 0.976 2.129 30.124 5 PP_DA2DG3:DC10DT11_TT P 2 ? T 11 ? P 3 ? T 10 ? 1 B DG 3 1_555 C DC 10 1_555 B DT 4 1_555 C DA 9 1_555 0.887 -0.617 3.002 2.630 2.596 33.048 -1.478 -1.145 3.006 4.546 -4.605 33.248 6 PP_DG3DT4:DA9DC10_TT P 3 ? T 10 ? P 4 ? T 9 ? 1 B DT 4 1_555 C DA 9 1_555 B DA 5 1_555 C DT 8 1_555 0.599 -1.005 3.447 -4.263 9.839 35.819 -2.876 -1.502 2.989 15.572 6.748 37.339 7 PP_DT4DA5:DT8DA9_TT P 4 ? T 9 ? P 5 ? T 8 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 "THYMIDINE-5'-TRIPHOSPHATE" TTP 8 water HOH #