HEADER HYDROLASE 04-JAN-05 2BGR TITLE CRYSTAL STRUCTURE OF HIV-1 TAT DERIVED NONAPEPTIDES TAT(1-9) BOUND TO TITLE 2 THE ACTIVE SITE OF DIPEPTIDYL PEPTIDASE IV (CD26) CAVEAT 2BGR THR B 304 HAS WRONG CHIRALITY AT ATOM CB FUC C 3 HAS WRONG CAVEAT 2 2BGR CHIRALITY AT ATOM C1 FUC H 2 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL PEPTIDASE IV; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN, RESIDUES 29-766; COMPND 5 SYNONYM: DPP IV, T-CELL ACTIVATION ANTIGEN CD26, TP103, ADENOSINE COMPND 6 DEAMINASE COMPLEXING PROTEIN-2, ADABP; COMPND 7 EC: 3.4.14.5; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: HIV-1 TAT PROTEIN DERIVED N-TERMINAL NONAPEPTIDE; COMPND 11 CHAIN: Y, Z; COMPND 12 SYNONYM: TRANSACTIVATING REGULATORY PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: KIDNEY; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9 CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBACHTC; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; SOURCE 14 ORGANISM_TAXID: 11676 KEYWDS HYDROLASE, HYDROLASE-COMPLEX, DPPIV, ALPHA/BETA-HYDROLASE FOLD, BETA- KEYWDS 2 PROPELLER FOLD EXPDTA X-RAY DIFFRACTION AUTHOR W.A.WEIHOFEN,J.LIU,W.REUTTER,W.SAENGER,H.FAN REVDAT 7 13-DEC-23 2BGR 1 HETSYN REVDAT 6 29-JUL-20 2BGR 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 13-JUL-11 2BGR 1 VERSN REVDAT 4 24-FEB-09 2BGR 1 VERSN REVDAT 3 14-APR-05 2BGR 1 JRNL REVDAT 2 15-FEB-05 2BGR 1 SOURCE REVDAT 1 27-JAN-05 2BGR 0 JRNL AUTH W.A.WEIHOFEN,J.LIU,W.REUTTER,W.SAENGER,H.FAN JRNL TITL CRYSTAL STRUCTURES OF HIV-1 TAT-DERIVED NONAPEPTIDES JRNL TITL 2 TAT-(1-9) AND TRP2-TAT-(1-9) BOUND TO THE ACTIVE SITE OF JRNL TITL 3 DIPEPTIDYL-PEPTIDASE IV (CD26) JRNL REF J.BIOL.CHEM. V. 280 14911 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15695814 JRNL DOI 10.1074/JBC.M413400200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.1999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 127470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1297 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8872 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 364 REMARK 3 SOLVENT ATOMS : 1746 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.49000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : 1.60000 REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.392 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12735 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 10841 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 17354 ; 1.508 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 25156 ; 0.858 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1458 ; 6.384 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 620 ;34.012 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2004 ;14.580 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;18.887 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1887 ; 0.150 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 13858 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2678 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2144 ; 0.207 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 10711 ; 0.189 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 7131 ; 0.088 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 2041 ; 0.215 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.129 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 38 ; 0.209 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 40 ; 0.233 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9432 ; 1.041 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2960 ; 0.203 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6650 ; 2.066 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5522 ; 3.048 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 41 A 278 6 REMARK 3 1 B 41 B 278 6 REMARK 3 2 A 296 A 764 6 REMARK 3 2 B 296 B 764 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 10908 ; 0.48 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 10908 ; 1.05 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 6 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 85 REMARK 3 RESIDUE RANGE : A 86 A 200 REMARK 3 RESIDUE RANGE : A 301 A 497 REMARK 3 RESIDUE RANGE : A 498 A 600 REMARK 3 RESIDUE RANGE : A 601 A 766 REMARK 3 RESIDUE RANGE : A 201 A 300 REMARK 3 ORIGIN FOR THE GROUP (A): 45.2820 54.8900 39.5050 REMARK 3 T TENSOR REMARK 3 T11: -0.1848 T22: -0.2903 REMARK 3 T33: -0.2995 T12: -0.0037 REMARK 3 T13: 0.0129 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.3739 L22: 0.2899 REMARK 3 L33: 0.6331 L12: -0.0499 REMARK 3 L13: 0.0654 L23: -0.0861 REMARK 3 S TENSOR REMARK 3 S11: 0.0264 S12: 0.0219 S13: 0.0788 REMARK 3 S21: 0.0125 S22: -0.0197 S23: -0.0581 REMARK 3 S31: -0.0534 S32: 0.0494 S33: -0.0067 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 6 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 38 B 85 REMARK 3 RESIDUE RANGE : B 86 B 200 REMARK 3 RESIDUE RANGE : B 301 B 497 REMARK 3 RESIDUE RANGE : B 498 B 600 REMARK 3 RESIDUE RANGE : B 601 B 766 REMARK 3 RESIDUE RANGE : B 201 B 300 REMARK 3 ORIGIN FOR THE GROUP (A): -10.5200 60.3050 31.9770 REMARK 3 T TENSOR REMARK 3 T11: -0.1855 T22: -0.2485 REMARK 3 T33: -0.2452 T12: -0.0084 REMARK 3 T13: 0.0232 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 1.0067 L22: 0.3226 REMARK 3 L33: 0.5385 L12: -0.1119 REMARK 3 L13: 0.1444 L23: -0.2425 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: -0.0716 S13: -0.1091 REMARK 3 S21: -0.0171 S22: 0.0095 S23: 0.0652 REMARK 3 S31: 0.0689 S32: -0.1017 S33: -0.0133 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES 29 - 37 ARE DISORDERED AND WERE NOT MODELLED REMARK 4 REMARK 4 2BGR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1290022256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 127470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1N1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 59.14950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.66600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.52150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.66600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 59.14950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.52150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 66.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, Y, Z, C, D, E, F, G, H, REMARK 350 AND CHAINS: I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 29 REMARK 465 LYS A 30 REMARK 465 GLY A 31 REMARK 465 THR A 32 REMARK 465 ASP A 33 REMARK 465 ASP A 34 REMARK 465 ALA A 35 REMARK 465 THR A 36 REMARK 465 ALA A 37 REMARK 465 ASN B 29 REMARK 465 LYS B 30 REMARK 465 GLY B 31 REMARK 465 THR B 32 REMARK 465 ASP B 33 REMARK 465 ASP B 34 REMARK 465 ALA B 35 REMARK 465 THR B 36 REMARK 465 ALA B 37 REMARK 465 VAL Y 4 REMARK 465 ASP Y 5 REMARK 465 PRO Y 6 REMARK 465 ASN Y 7 REMARK 465 ILE Y 8 REMARK 465 GLU Y 9 REMARK 465 VAL Z 4 REMARK 465 ASP Z 5 REMARK 465 PRO Z 6 REMARK 465 ASN Z 7 REMARK 465 ILE Z 8 REMARK 465 GLU Z 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2628 O HOH B 2629 1.80 REMARK 500 SG CYS A 472 O HOH A 2625 2.01 REMARK 500 O HOH B 2113 O HOH B 2140 2.09 REMARK 500 O HOH B 2188 O HOH B 2495 2.10 REMARK 500 SG CYS B 472 O HOH B 2571 2.14 REMARK 500 O HOH B 2654 O HOH B 2655 2.14 REMARK 500 O HOH A 2737 O HOH A 2738 2.15 REMARK 500 O HOH A 2046 O HOH A 2056 2.15 REMARK 500 O HOH A 2100 O HOH A 2276 2.15 REMARK 500 O HOH B 2386 O HOH B 2388 2.16 REMARK 500 O HOH B 2516 O HOH B 2581 2.17 REMARK 500 OH TYR B 439 O HOH B 2549 2.18 REMARK 500 O LEU B 276 O HOH B 2348 2.19 REMARK 500 O HOH A 2005 O HOH A 2007 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 133 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 184 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 184 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 310 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 310 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 LEU A 415 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 CYS A 472 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 492 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 492 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 515 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 658 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 658 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP A 678 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 669 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 669 NE - CZ - NH2 ANGL. DEV. = -7.2 DEGREES REMARK 500 ASP B 678 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 691 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 709 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 64 -169.05 -164.12 REMARK 500 GLN A 72 -74.32 -104.20 REMARK 500 GLU A 73 58.40 -118.81 REMARK 500 GLN A 123 -101.36 -110.71 REMARK 500 TRP A 124 -146.78 -94.64 REMARK 500 HIS A 162 36.87 -158.06 REMARK 500 ILE A 193 -63.59 -128.24 REMARK 500 SER A 242 -163.48 72.04 REMARK 500 GLN A 320 39.04 -84.69 REMARK 500 LYS A 423 17.36 57.42 REMARK 500 ASP A 438 100.55 -160.40 REMARK 500 ASN A 450 79.87 -158.53 REMARK 500 ASN A 520 80.85 -2.92 REMARK 500 GLU A 521 2.48 83.93 REMARK 500 TYR A 547 -71.88 -126.55 REMARK 500 ARG A 597 47.96 -148.89 REMARK 500 THR A 600 -91.87 -123.42 REMARK 500 SER A 630 -118.22 66.14 REMARK 500 ALA A 654 57.11 37.39 REMARK 500 ASP A 678 -93.79 -113.43 REMARK 500 ASN A 710 -72.02 -99.31 REMARK 500 ASP A 739 -156.61 -100.74 REMARK 500 ILE A 742 57.08 36.35 REMARK 500 SER B 64 -168.28 -164.78 REMARK 500 ASN B 74 -1.44 64.05 REMARK 500 GLN B 123 -101.30 -114.73 REMARK 500 TRP B 124 -141.20 -94.66 REMARK 500 HIS B 162 35.88 -147.71 REMARK 500 ILE B 193 -60.95 -127.81 REMARK 500 SER B 242 -164.42 64.78 REMARK 500 GLN B 320 38.78 -81.97 REMARK 500 LYS B 423 18.94 56.05 REMARK 500 ASN B 450 78.16 -151.28 REMARK 500 TYR B 547 -70.87 -124.62 REMARK 500 ARG B 597 45.61 -141.98 REMARK 500 THR B 600 -96.64 -119.96 REMARK 500 SER B 630 -123.36 70.75 REMARK 500 ASP B 678 -98.57 -113.47 REMARK 500 ASN B 710 -72.19 -101.35 REMARK 500 ASP B 739 -157.34 -100.12 REMARK 500 ILE B 742 58.36 32.60 REMARK 500 ASP Z 2 117.76 -5.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2050 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH A2062 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A2067 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B2043 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH B2059 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH B2121 DISTANCE = 6.47 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J2E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DIPEPTIDYL PEPTIDASE IV REMARK 900 RELATED ID: 1N1M RELATED DB: PDB REMARK 900 HUMAN DIPEPTIDYL PEPTIDASE IV/CD26 IN COMPLEX WITH ANINHIBITOR REMARK 900 RELATED ID: 1NU6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DIPEPTIDYL PEPTIDASE IV (DPP-IV) REMARK 900 RELATED ID: 1NU8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DIPEPTIDYL PEPTIDASE IV (DPP-IV)IN REMARK 900 COMPLEX WITH DIPROTIN A (ILI) REMARK 900 RELATED ID: 1PFQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN APO DIPEPTIDYL PEPTIDASE IV /CD26 REMARK 900 RELATED ID: 1R9M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DIPEPTIDYL PEPTIDASE IV AT 2.1ANG. REMARK 900 RESOLUTION. REMARK 900 RELATED ID: 1RWQ RELATED DB: PDB REMARK 900 HUMAN DIPEPTIDYL PEPTIDASE IV IN COMPLEX WITH 5-AMINOMETHYL-6-(2,4- REMARK 900 DICHLORO-PHENYL )-2-(3,5-DIMETHOXY-PHENYL)-PYRIMIDIN-4-YLAMINE REMARK 900 RELATED ID: 1TK3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN APO DIPEPTIDYL PEPTIDASE IV/CD26 REMARK 900 RELATED ID: 1TKR RELATED DB: PDB REMARK 900 HUMAN DIPEPTIDYL PEPTIDASE IV/CD26 INHIBITED WITHDIISOPROPYL REMARK 900 FLUOROPHOSPHATE REMARK 900 RELATED ID: 1U8E RELATED DB: PDB REMARK 900 HUMAN DIPEPTIDYL PEPTIDASE IV/CD26 MUTANT Y547F REMARK 900 RELATED ID: 1W1I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF DIPEPTIDYL PEPTIDASE IV (DPPIV OR CD26) IN REMARK 900 COMPLEX WITH ADENOSINE DEAMINASE REMARK 900 RELATED ID: 2BGN RELATED DB: PDB REMARK 900 HIV-1 TAT PROTEIN DERIVED N-TERMINAL NONAPEPTIDE TRP2-TAT(1-9) REMARK 900 BOUND TO THE ACTIVE SITE OF DIPEPTIDYL PEPTIDASE IV (CD26) DBREF 2BGR A 29 766 UNP P27487 DPP4_HUMAN 29 766 DBREF 2BGR B 29 766 UNP P27487 DPP4_HUMAN 29 766 DBREF 2BGR Y 1 9 UNP P12506 TAT_HV1Z2 1 9 DBREF 2BGR Z 1 9 UNP P12506 TAT_HV1Z2 1 9 SEQRES 1 A 738 ASN LYS GLY THR ASP ASP ALA THR ALA ASP SER ARG LYS SEQRES 2 A 738 THR TYR THR LEU THR ASP TYR LEU LYS ASN THR TYR ARG SEQRES 3 A 738 LEU LYS LEU TYR SER LEU ARG TRP ILE SER ASP HIS GLU SEQRES 4 A 738 TYR LEU TYR LYS GLN GLU ASN ASN ILE LEU VAL PHE ASN SEQRES 5 A 738 ALA GLU TYR GLY ASN SER SER VAL PHE LEU GLU ASN SER SEQRES 6 A 738 THR PHE ASP GLU PHE GLY HIS SER ILE ASN ASP TYR SER SEQRES 7 A 738 ILE SER PRO ASP GLY GLN PHE ILE LEU LEU GLU TYR ASN SEQRES 8 A 738 TYR VAL LYS GLN TRP ARG HIS SER TYR THR ALA SER TYR SEQRES 9 A 738 ASP ILE TYR ASP LEU ASN LYS ARG GLN LEU ILE THR GLU SEQRES 10 A 738 GLU ARG ILE PRO ASN ASN THR GLN TRP VAL THR TRP SER SEQRES 11 A 738 PRO VAL GLY HIS LYS LEU ALA TYR VAL TRP ASN ASN ASP SEQRES 12 A 738 ILE TYR VAL LYS ILE GLU PRO ASN LEU PRO SER TYR ARG SEQRES 13 A 738 ILE THR TRP THR GLY LYS GLU ASP ILE ILE TYR ASN GLY SEQRES 14 A 738 ILE THR ASP TRP VAL TYR GLU GLU GLU VAL PHE SER ALA SEQRES 15 A 738 TYR SER ALA LEU TRP TRP SER PRO ASN GLY THR PHE LEU SEQRES 16 A 738 ALA TYR ALA GLN PHE ASN ASP THR GLU VAL PRO LEU ILE SEQRES 17 A 738 GLU TYR SER PHE TYR SER ASP GLU SER LEU GLN TYR PRO SEQRES 18 A 738 LYS THR VAL ARG VAL PRO TYR PRO LYS ALA GLY ALA VAL SEQRES 19 A 738 ASN PRO THR VAL LYS PHE PHE VAL VAL ASN THR ASP SER SEQRES 20 A 738 LEU SER SER VAL THR ASN ALA THR SER ILE GLN ILE THR SEQRES 21 A 738 ALA PRO ALA SER MET LEU ILE GLY ASP HIS TYR LEU CYS SEQRES 22 A 738 ASP VAL THR TRP ALA THR GLN GLU ARG ILE SER LEU GLN SEQRES 23 A 738 TRP LEU ARG ARG ILE GLN ASN TYR SER VAL MET ASP ILE SEQRES 24 A 738 CYS ASP TYR ASP GLU SER SER GLY ARG TRP ASN CYS LEU SEQRES 25 A 738 VAL ALA ARG GLN HIS ILE GLU MET SER THR THR GLY TRP SEQRES 26 A 738 VAL GLY ARG PHE ARG PRO SER GLU PRO HIS PHE THR LEU SEQRES 27 A 738 ASP GLY ASN SER PHE TYR LYS ILE ILE SER ASN GLU GLU SEQRES 28 A 738 GLY TYR ARG HIS ILE CYS TYR PHE GLN ILE ASP LYS LYS SEQRES 29 A 738 ASP CYS THR PHE ILE THR LYS GLY THR TRP GLU VAL ILE SEQRES 30 A 738 GLY ILE GLU ALA LEU THR SER ASP TYR LEU TYR TYR ILE SEQRES 31 A 738 SER ASN GLU TYR LYS GLY MET PRO GLY GLY ARG ASN LEU SEQRES 32 A 738 TYR LYS ILE GLN LEU SER ASP TYR THR LYS VAL THR CYS SEQRES 33 A 738 LEU SER CYS GLU LEU ASN PRO GLU ARG CYS GLN TYR TYR SEQRES 34 A 738 SER VAL SER PHE SER LYS GLU ALA LYS TYR TYR GLN LEU SEQRES 35 A 738 ARG CYS SER GLY PRO GLY LEU PRO LEU TYR THR LEU HIS SEQRES 36 A 738 SER SER VAL ASN ASP LYS GLY LEU ARG VAL LEU GLU ASP SEQRES 37 A 738 ASN SER ALA LEU ASP LYS MET LEU GLN ASN VAL GLN MET SEQRES 38 A 738 PRO SER LYS LYS LEU ASP PHE ILE ILE LEU ASN GLU THR SEQRES 39 A 738 LYS PHE TRP TYR GLN MET ILE LEU PRO PRO HIS PHE ASP SEQRES 40 A 738 LYS SER LYS LYS TYR PRO LEU LEU LEU ASP VAL TYR ALA SEQRES 41 A 738 GLY PRO CYS SER GLN LYS ALA ASP THR VAL PHE ARG LEU SEQRES 42 A 738 ASN TRP ALA THR TYR LEU ALA SER THR GLU ASN ILE ILE SEQRES 43 A 738 VAL ALA SER PHE ASP GLY ARG GLY SER GLY TYR GLN GLY SEQRES 44 A 738 ASP LYS ILE MET HIS ALA ILE ASN ARG ARG LEU GLY THR SEQRES 45 A 738 PHE GLU VAL GLU ASP GLN ILE GLU ALA ALA ARG GLN PHE SEQRES 46 A 738 SER LYS MET GLY PHE VAL ASP ASN LYS ARG ILE ALA ILE SEQRES 47 A 738 TRP GLY TRP SER TYR GLY GLY TYR VAL THR SER MET VAL SEQRES 48 A 738 LEU GLY SER GLY SER GLY VAL PHE LYS CYS GLY ILE ALA SEQRES 49 A 738 VAL ALA PRO VAL SER ARG TRP GLU TYR TYR ASP SER VAL SEQRES 50 A 738 TYR THR GLU ARG TYR MET GLY LEU PRO THR PRO GLU ASP SEQRES 51 A 738 ASN LEU ASP HIS TYR ARG ASN SER THR VAL MET SER ARG SEQRES 52 A 738 ALA GLU ASN PHE LYS GLN VAL GLU TYR LEU LEU ILE HIS SEQRES 53 A 738 GLY THR ALA ASP ASP ASN VAL HIS PHE GLN GLN SER ALA SEQRES 54 A 738 GLN ILE SER LYS ALA LEU VAL ASP VAL GLY VAL ASP PHE SEQRES 55 A 738 GLN ALA MET TRP TYR THR ASP GLU ASP HIS GLY ILE ALA SEQRES 56 A 738 SER SER THR ALA HIS GLN HIS ILE TYR THR HIS MET SER SEQRES 57 A 738 HIS PHE ILE LYS GLN CYS PHE SER LEU PRO SEQRES 1 B 738 ASN LYS GLY THR ASP ASP ALA THR ALA ASP SER ARG LYS SEQRES 2 B 738 THR TYR THR LEU THR ASP TYR LEU LYS ASN THR TYR ARG SEQRES 3 B 738 LEU LYS LEU TYR SER LEU ARG TRP ILE SER ASP HIS GLU SEQRES 4 B 738 TYR LEU TYR LYS GLN GLU ASN ASN ILE LEU VAL PHE ASN SEQRES 5 B 738 ALA GLU TYR GLY ASN SER SER VAL PHE LEU GLU ASN SER SEQRES 6 B 738 THR PHE ASP GLU PHE GLY HIS SER ILE ASN ASP TYR SER SEQRES 7 B 738 ILE SER PRO ASP GLY GLN PHE ILE LEU LEU GLU TYR ASN SEQRES 8 B 738 TYR VAL LYS GLN TRP ARG HIS SER TYR THR ALA SER TYR SEQRES 9 B 738 ASP ILE TYR ASP LEU ASN LYS ARG GLN LEU ILE THR GLU SEQRES 10 B 738 GLU ARG ILE PRO ASN ASN THR GLN TRP VAL THR TRP SER SEQRES 11 B 738 PRO VAL GLY HIS LYS LEU ALA TYR VAL TRP ASN ASN ASP SEQRES 12 B 738 ILE TYR VAL LYS ILE GLU PRO ASN LEU PRO SER TYR ARG SEQRES 13 B 738 ILE THR TRP THR GLY LYS GLU ASP ILE ILE TYR ASN GLY SEQRES 14 B 738 ILE THR ASP TRP VAL TYR GLU GLU GLU VAL PHE SER ALA SEQRES 15 B 738 TYR SER ALA LEU TRP TRP SER PRO ASN GLY THR PHE LEU SEQRES 16 B 738 ALA TYR ALA GLN PHE ASN ASP THR GLU VAL PRO LEU ILE SEQRES 17 B 738 GLU TYR SER PHE TYR SER ASP GLU SER LEU GLN TYR PRO SEQRES 18 B 738 LYS THR VAL ARG VAL PRO TYR PRO LYS ALA GLY ALA VAL SEQRES 19 B 738 ASN PRO THR VAL LYS PHE PHE VAL VAL ASN THR ASP SER SEQRES 20 B 738 LEU SER SER VAL THR ASN ALA THR SER ILE GLN ILE THR SEQRES 21 B 738 ALA PRO ALA SER MET LEU ILE GLY ASP HIS TYR LEU CYS SEQRES 22 B 738 ASP VAL THR TRP ALA THR GLN GLU ARG ILE SER LEU GLN SEQRES 23 B 738 TRP LEU ARG ARG ILE GLN ASN TYR SER VAL MET ASP ILE SEQRES 24 B 738 CYS ASP TYR ASP GLU SER SER GLY ARG TRP ASN CYS LEU SEQRES 25 B 738 VAL ALA ARG GLN HIS ILE GLU MET SER THR THR GLY TRP SEQRES 26 B 738 VAL GLY ARG PHE ARG PRO SER GLU PRO HIS PHE THR LEU SEQRES 27 B 738 ASP GLY ASN SER PHE TYR LYS ILE ILE SER ASN GLU GLU SEQRES 28 B 738 GLY TYR ARG HIS ILE CYS TYR PHE GLN ILE ASP LYS LYS SEQRES 29 B 738 ASP CYS THR PHE ILE THR LYS GLY THR TRP GLU VAL ILE SEQRES 30 B 738 GLY ILE GLU ALA LEU THR SER ASP TYR LEU TYR TYR ILE SEQRES 31 B 738 SER ASN GLU TYR LYS GLY MET PRO GLY GLY ARG ASN LEU SEQRES 32 B 738 TYR LYS ILE GLN LEU SER ASP TYR THR LYS VAL THR CYS SEQRES 33 B 738 LEU SER CYS GLU LEU ASN PRO GLU ARG CYS GLN TYR TYR SEQRES 34 B 738 SER VAL SER PHE SER LYS GLU ALA LYS TYR TYR GLN LEU SEQRES 35 B 738 ARG CYS SER GLY PRO GLY LEU PRO LEU TYR THR LEU HIS SEQRES 36 B 738 SER SER VAL ASN ASP LYS GLY LEU ARG VAL LEU GLU ASP SEQRES 37 B 738 ASN SER ALA LEU ASP LYS MET LEU GLN ASN VAL GLN MET SEQRES 38 B 738 PRO SER LYS LYS LEU ASP PHE ILE ILE LEU ASN GLU THR SEQRES 39 B 738 LYS PHE TRP TYR GLN MET ILE LEU PRO PRO HIS PHE ASP SEQRES 40 B 738 LYS SER LYS LYS TYR PRO LEU LEU LEU ASP VAL TYR ALA SEQRES 41 B 738 GLY PRO CYS SER GLN LYS ALA ASP THR VAL PHE ARG LEU SEQRES 42 B 738 ASN TRP ALA THR TYR LEU ALA SER THR GLU ASN ILE ILE SEQRES 43 B 738 VAL ALA SER PHE ASP GLY ARG GLY SER GLY TYR GLN GLY SEQRES 44 B 738 ASP LYS ILE MET HIS ALA ILE ASN ARG ARG LEU GLY THR SEQRES 45 B 738 PHE GLU VAL GLU ASP GLN ILE GLU ALA ALA ARG GLN PHE SEQRES 46 B 738 SER LYS MET GLY PHE VAL ASP ASN LYS ARG ILE ALA ILE SEQRES 47 B 738 TRP GLY TRP SER TYR GLY GLY TYR VAL THR SER MET VAL SEQRES 48 B 738 LEU GLY SER GLY SER GLY VAL PHE LYS CYS GLY ILE ALA SEQRES 49 B 738 VAL ALA PRO VAL SER ARG TRP GLU TYR TYR ASP SER VAL SEQRES 50 B 738 TYR THR GLU ARG TYR MET GLY LEU PRO THR PRO GLU ASP SEQRES 51 B 738 ASN LEU ASP HIS TYR ARG ASN SER THR VAL MET SER ARG SEQRES 52 B 738 ALA GLU ASN PHE LYS GLN VAL GLU TYR LEU LEU ILE HIS SEQRES 53 B 738 GLY THR ALA ASP ASP ASN VAL HIS PHE GLN GLN SER ALA SEQRES 54 B 738 GLN ILE SER LYS ALA LEU VAL ASP VAL GLY VAL ASP PHE SEQRES 55 B 738 GLN ALA MET TRP TYR THR ASP GLU ASP HIS GLY ILE ALA SEQRES 56 B 738 SER SER THR ALA HIS GLN HIS ILE TYR THR HIS MET SER SEQRES 57 B 738 HIS PHE ILE LYS GLN CYS PHE SER LEU PRO SEQRES 1 Y 9 MET ASP PRO VAL ASP PRO ASN ILE GLU SEQRES 1 Z 9 MET ASP PRO VAL ASP PRO ASN ILE GLU MODRES 2BGR ASN A 85 ASN GLYCOSYLATION SITE MODRES 2BGR ASN A 92 ASN GLYCOSYLATION SITE MODRES 2BGR ASN A 150 ASN GLYCOSYLATION SITE MODRES 2BGR ASN A 219 ASN GLYCOSYLATION SITE MODRES 2BGR ASN A 229 ASN GLYCOSYLATION SITE MODRES 2BGR ASN A 281 ASN GLYCOSYLATION SITE MODRES 2BGR ASN A 321 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 85 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 92 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 150 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 219 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 229 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 281 ASN GLYCOSYLATION SITE MODRES 2BGR ASN B 321 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET FUC C 3 10 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET FUC H 2 10 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET NAG K 1 14 HET NAG K 2 14 HET NAG L 1 14 HET NAG L 2 14 HET NAG A1770 14 HET NAG A1780 14 HET NAG B1769 14 HET NAG B1779 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 23(C8 H15 N O6) FORMUL 5 FUC 2(C6 H12 O5) FORMUL 7 BMA 2(C6 H12 O6) FORMUL 19 HOH *1746(H2 O) HELIX 1 1 THR A 44 ASN A 51 1 8 HELIX 2 2 ASP A 200 VAL A 207 1 8 HELIX 3 3 ASP A 274 LEU A 276 5 3 HELIX 4 4 PRO A 290 ILE A 295 1 6 HELIX 5 5 VAL A 341 GLN A 344 5 4 HELIX 6 6 GLU A 421 MET A 425 5 5 HELIX 7 7 ASN A 497 GLN A 505 1 9 HELIX 8 8 ASN A 562 THR A 570 1 9 HELIX 9 9 GLY A 587 HIS A 592 1 6 HELIX 10 10 ALA A 593 ASN A 595 5 3 HELIX 11 11 THR A 600 SER A 614 1 15 HELIX 12 12 SER A 630 GLY A 641 1 12 HELIX 13 13 ARG A 658 TYR A 662 5 5 HELIX 14 14 ASP A 663 GLY A 672 1 10 HELIX 15 15 ASN A 679 SER A 686 1 8 HELIX 16 16 VAL A 688 VAL A 698 5 11 HELIX 17 17 PHE A 713 VAL A 726 1 14 HELIX 18 18 SER A 744 PHE A 763 1 20 HELIX 19 19 THR B 44 ASN B 51 1 8 HELIX 20 20 ASP B 200 VAL B 207 1 8 HELIX 21 21 ASP B 274 LEU B 276 5 3 HELIX 22 22 PRO B 290 ILE B 295 1 6 HELIX 23 23 VAL B 341 GLN B 344 5 4 HELIX 24 24 GLU B 421 MET B 425 5 5 HELIX 25 25 ASN B 497 GLN B 505 1 9 HELIX 26 26 ASN B 562 THR B 570 1 9 HELIX 27 27 GLY B 587 HIS B 592 1 6 HELIX 28 28 ALA B 593 ASN B 595 5 3 HELIX 29 29 THR B 600 MET B 616 1 17 HELIX 30 30 SER B 630 GLY B 641 1 12 HELIX 31 31 ARG B 658 TYR B 662 5 5 HELIX 32 32 ASP B 663 GLY B 672 1 10 HELIX 33 33 ASN B 679 SER B 686 1 8 HELIX 34 34 VAL B 688 VAL B 698 5 11 HELIX 35 35 HIS B 712 VAL B 726 1 15 HELIX 36 36 SER B 744 PHE B 763 1 20 SHEET 1 AA 2 LYS A 41 THR A 42 0 SHEET 2 AA 2 VAL A 507 GLN A 508 1 N GLN A 508 O LYS A 41 SHEET 1 AB 4 ARG A 61 TRP A 62 0 SHEET 2 AB 4 GLU A 67 LYS A 71 -1 O LEU A 69 N ARG A 61 SHEET 3 AB 4 ILE A 76 ASN A 80 -1 O LEU A 77 N TYR A 70 SHEET 4 AB 4 SER A 86 LEU A 90 -1 O SER A 87 N VAL A 78 SHEET 1 AC 4 ASP A 104 ILE A 107 0 SHEET 2 AC 4 PHE A 113 LYS A 122 -1 O LEU A 115 N SER A 106 SHEET 3 AC 4 TYR A 128 ASP A 136 -1 O THR A 129 N VAL A 121 SHEET 4 AC 4 GLN A 141 LEU A 142 -1 O GLN A 141 N ASP A 136 SHEET 1 AD 4 TRP A 154 TRP A 157 0 SHEET 2 AD 4 LEU A 164 TRP A 168 -1 O ALA A 165 N THR A 156 SHEET 3 AD 4 ASP A 171 LYS A 175 -1 O ASP A 171 N TRP A 168 SHEET 4 AD 4 TYR A 183 ARG A 184 -1 O TYR A 183 N VAL A 174 SHEET 1 AE 3 ILE A 194 ASN A 196 0 SHEET 2 AE 3 PHE A 222 ASN A 229 -1 O PHE A 228 N TYR A 195 SHEET 3 AE 3 LEU A 214 TRP A 216 -1 O TRP A 215 N ALA A 224 SHEET 1 AF 4 ILE A 194 ASN A 196 0 SHEET 2 AF 4 PHE A 222 ASN A 229 -1 O PHE A 228 N TYR A 195 SHEET 3 AF 4 THR A 265 ASN A 272 -1 O THR A 265 N ASN A 229 SHEET 4 AF 4 SER A 284 ILE A 287 -1 O ILE A 285 N VAL A 270 SHEET 1 AG 2 LEU A 235 PHE A 240 0 SHEET 2 AG 2 LYS A 250 PRO A 255 -1 O LYS A 250 N PHE A 240 SHEET 1 AH 4 HIS A 298 THR A 307 0 SHEET 2 AH 4 ARG A 310 ARG A 317 -1 O ARG A 310 N ALA A 306 SHEET 3 AH 4 TYR A 322 ASP A 331 -1 O TYR A 322 N ARG A 317 SHEET 4 AH 4 HIS A 345 MET A 348 -1 O HIS A 345 N MET A 325 SHEET 1 AI 4 HIS A 298 THR A 307 0 SHEET 2 AI 4 ARG A 310 ARG A 317 -1 O ARG A 310 N ALA A 306 SHEET 3 AI 4 TYR A 322 ASP A 331 -1 O TYR A 322 N ARG A 317 SHEET 4 AI 4 ARG A 336 CYS A 339 -1 O ARG A 336 N ASP A 331 SHEET 1 AJ 4 HIS A 363 PHE A 364 0 SHEET 2 AJ 4 SER A 370 SER A 376 -1 O TYR A 372 N HIS A 363 SHEET 3 AJ 4 ARG A 382 GLN A 388 -1 O HIS A 383 N ILE A 375 SHEET 4 AJ 4 THR A 395 PHE A 396 -1 O THR A 395 N TYR A 386 SHEET 1 AK 4 VAL A 404 LEU A 410 0 SHEET 2 AK 4 TYR A 414 SER A 419 -1 O TYR A 416 N GLU A 408 SHEET 3 AK 4 ASN A 430 GLN A 435 -1 O ASN A 430 N SER A 419 SHEET 4 AK 4 VAL A 442 CYS A 444 -1 O THR A 443 N LYS A 433 SHEET 1 AL 4 TYR A 457 PHE A 461 0 SHEET 2 AL 4 TYR A 467 CYS A 472 -1 O GLN A 469 N SER A 460 SHEET 3 AL 4 LEU A 479 SER A 484 -1 O LEU A 479 N CYS A 472 SHEET 4 AL 4 LYS A 489 GLU A 495 -1 O LYS A 489 N SER A 484 SHEET 1 AM 8 SER A 511 LEU A 519 0 SHEET 2 AM 8 THR A 522 LEU A 530 -1 O THR A 522 N LEU A 519 SHEET 3 AM 8 ILE A 574 PHE A 578 -1 O VAL A 575 N ILE A 529 SHEET 4 AM 8 TYR A 540 ASP A 545 1 O PRO A 541 N ILE A 574 SHEET 5 AM 8 VAL A 619 TRP A 629 1 N ASP A 620 O TYR A 540 SHEET 6 AM 8 CYS A 649 VAL A 653 1 O CYS A 649 N ILE A 626 SHEET 7 AM 8 GLU A 699 GLY A 705 1 O GLU A 699 N GLY A 650 SHEET 8 AM 8 GLN A 731 TYR A 735 1 O GLN A 731 N LEU A 702 SHEET 1 BA 2 LYS B 41 THR B 42 0 SHEET 2 BA 2 VAL B 507 GLN B 508 1 N GLN B 508 O LYS B 41 SHEET 1 BB 4 ARG B 61 TRP B 62 0 SHEET 2 BB 4 GLU B 67 GLN B 72 -1 O LEU B 69 N ARG B 61 SHEET 3 BB 4 ASN B 75 ASN B 80 -1 O ASN B 75 N GLN B 72 SHEET 4 BB 4 SER B 86 LEU B 90 -1 O SER B 87 N VAL B 78 SHEET 1 BC 4 ILE B 102 ILE B 107 0 SHEET 2 BC 4 PHE B 113 LYS B 122 -1 O LEU B 115 N SER B 106 SHEET 3 BC 4 TYR B 128 ASP B 136 -1 O THR B 129 N VAL B 121 SHEET 4 BC 4 GLN B 141 LEU B 142 -1 O GLN B 141 N ASP B 136 SHEET 1 BD 4 TRP B 154 TRP B 157 0 SHEET 2 BD 4 LEU B 164 TRP B 168 -1 O ALA B 165 N THR B 156 SHEET 3 BD 4 ASP B 171 LYS B 175 -1 O ASP B 171 N TRP B 168 SHEET 4 BD 4 TYR B 183 ARG B 184 -1 O TYR B 183 N VAL B 174 SHEET 1 BE 3 ILE B 194 ASN B 196 0 SHEET 2 BE 3 PHE B 222 ASN B 229 -1 O PHE B 228 N TYR B 195 SHEET 3 BE 3 LEU B 214 TRP B 216 -1 O TRP B 215 N ALA B 224 SHEET 1 BF 4 ILE B 194 ASN B 196 0 SHEET 2 BF 4 PHE B 222 ASN B 229 -1 O PHE B 228 N TYR B 195 SHEET 3 BF 4 THR B 265 ASN B 272 -1 O THR B 265 N ASN B 229 SHEET 4 BF 4 SER B 284 GLN B 286 -1 O ILE B 285 N VAL B 270 SHEET 1 BG 2 LEU B 235 PHE B 240 0 SHEET 2 BG 2 LYS B 250 PRO B 255 -1 O LYS B 250 N PHE B 240 SHEET 1 BH 7 HIS B 298 THR B 307 0 SHEET 2 BH 7 ARG B 310 ARG B 317 -1 O ARG B 310 N ALA B 306 SHEET 3 BH 7 TYR B 322 ASP B 331 -1 O TYR B 322 N ARG B 317 SHEET 4 BH 7 ARG B 336 CYS B 339 -1 O ARG B 336 N ASP B 331 SHEET 5 BH 7 TYR B 322 ASP B 331 -1 O ASP B 329 N ASN B 338 SHEET 6 BH 7 HIS B 345 MET B 348 -1 O HIS B 345 N MET B 325 SHEET 7 BH 7 TYR B 322 ASP B 331 -1 O SER B 323 N GLU B 347 SHEET 1 BI 4 HIS B 363 PHE B 364 0 SHEET 2 BI 4 SER B 370 SER B 376 -1 O TYR B 372 N HIS B 363 SHEET 3 BI 4 ARG B 382 GLN B 388 -1 O HIS B 383 N ILE B 375 SHEET 4 BI 4 THR B 395 PHE B 396 -1 O THR B 395 N TYR B 386 SHEET 1 BJ 4 VAL B 404 LEU B 410 0 SHEET 2 BJ 4 TYR B 414 SER B 419 -1 O TYR B 416 N GLU B 408 SHEET 3 BJ 4 ASN B 430 GLN B 435 -1 O ASN B 430 N SER B 419 SHEET 4 BJ 4 ASP B 438 CYS B 444 -1 N ASP B 438 O GLN B 435 SHEET 1 BK 4 TYR B 457 PHE B 461 0 SHEET 2 BK 4 TYR B 467 CYS B 472 -1 O GLN B 469 N SER B 460 SHEET 3 BK 4 LEU B 479 SER B 484 -1 O LEU B 479 N CYS B 472 SHEET 4 BK 4 LYS B 489 GLU B 495 -1 O LYS B 489 N SER B 484 SHEET 1 BL 8 SER B 511 LEU B 519 0 SHEET 2 BL 8 THR B 522 LEU B 530 -1 O THR B 522 N LEU B 519 SHEET 3 BL 8 ILE B 574 PHE B 578 -1 O VAL B 575 N ILE B 529 SHEET 4 BL 8 TYR B 540 VAL B 546 1 O PRO B 541 N ILE B 574 SHEET 5 BL 8 VAL B 619 TRP B 629 1 N ASP B 620 O TYR B 540 SHEET 6 BL 8 CYS B 649 VAL B 653 1 O CYS B 649 N ILE B 626 SHEET 7 BL 8 GLU B 699 GLY B 705 1 O GLU B 699 N GLY B 650 SHEET 8 BL 8 GLN B 731 TYR B 735 1 O GLN B 731 N LEU B 702 SSBOND 1 CYS A 328 CYS A 339 1555 1555 2.08 SSBOND 2 CYS A 385 CYS A 394 1555 1555 2.07 SSBOND 3 CYS A 444 CYS A 447 1555 1555 2.02 SSBOND 4 CYS A 454 CYS A 472 1555 1555 2.08 SSBOND 5 CYS A 649 CYS A 762 1555 1555 2.09 SSBOND 6 CYS B 328 CYS B 339 1555 1555 2.07 SSBOND 7 CYS B 385 CYS B 394 1555 1555 2.07 SSBOND 8 CYS B 444 CYS B 447 1555 1555 2.05 SSBOND 9 CYS B 454 CYS B 472 1555 1555 2.10 SSBOND 10 CYS B 649 CYS B 762 1555 1555 2.08 LINK ND2 ASN A 85 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 92 C1 NAG A1780 1555 1555 1.45 LINK ND2 ASN A 150 C1 NAG A1770 1555 1555 1.46 LINK ND2 ASN A 219 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 229 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 281 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN A 321 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 85 C1 NAG H 1 1555 1555 1.43 LINK ND2 ASN B 92 C1 NAG B1779 1555 1555 1.45 LINK ND2 ASN B 150 C1 NAG B1769 1555 1555 1.45 LINK ND2 ASN B 219 C1 NAG I 1 1555 1555 1.45 LINK ND2 ASN B 229 C1 NAG J 1 1555 1555 1.45 LINK ND2 ASN B 281 C1 NAG K 1 1555 1555 1.45 LINK ND2 ASN B 321 C1 NAG L 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 3 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O6 NAG H 1 C1 FUC H 2 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.44 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.45 CISPEP 1 GLY A 474 PRO A 475 0 18.13 CISPEP 2 GLY B 474 PRO B 475 0 19.24 CRYST1 118.299 127.043 137.332 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008453 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007871 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007282 0.00000 MTRIX1 1 -0.946000 0.152000 -0.287000 35.34585 1 MTRIX2 1 0.185000 -0.473000 -0.861000 112.96806 1 MTRIX3 1 -0.266000 -0.868000 0.420000 75.64200 1