data_2BGZ # _entry.id 2BGZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2BGZ pdb_00002bgz 10.2210/pdb2bgz/pdb PDBE EBI-22132 ? ? WWPDB D_1290022132 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-01-27 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-08-23 5 'Structure model' 1 4 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' em_image_scans 2 4 'Structure model' em_software 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' refine # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_em_software.fitting_id' 2 4 'Structure model' '_em_software.image_processing_id' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_refine.ls_d_res_high' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BGZ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-01-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1WLG unspecified 'CRYSTAL STRUCTURE OF FLGE31, A MAJOR FRAGMENT OF THE HOOKPROTEIN' PDB 2BGY unspecified 'FIT OF THE X-RAY STRUCTURE OF THE BACTERIAL FLAGELLAR HOOK FRAGMENT FLGE31 INTO AN EM MAP FROM THE HOOK OF CAULOBACTER CRESCENTUS.' EMDB EMD-1132 'associated EM volume' 'A PARTIAL ATOMIC STRUCTURE FOR THE FLAGELLAR HOOK OF SALMONELLA TYPHIMURIUM' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shaikh, T.R.' 1 'Thomas, D.R.' 2 'Chen, J.Z.' 3 'Samatey, F.A.' 4 'Matsunami, H.' 5 'Imada, K.' 6 'Namba, K.' 7 'Derosier, D.J.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'A Partial Atomic Structure for the Flagellar Hook of Salmonella Typhimurium.' Proc.Natl.Acad.Sci.USA 102 1023 ? 2005 PNASA6 US 0027-8424 0040 ? 15657146 10.1073/PNAS.0409020102 1 'Structure of the Bacterial Flagellar Hook and Implication for the Molecular Universal Joint Mechanism.' Nature 431 1062 ? 2004 NATUAS UK 0028-0836 0006 ? 15510139 10.1038/NATURE02997 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shaikh, T.R.' 1 ? primary 'Thomas, D.R.' 2 ? primary 'Chen, J.Z.' 3 ? primary 'Samatey, F.A.' 4 ? primary 'Matsunami, H.' 5 ? primary 'Imada, K.' 6 ? primary 'Namba, K.' 7 ? primary 'Derosier, D.J.' 8 ? 1 'Samatey, F.A.' 9 ? 1 'Matsunami, H.' 10 ? 1 'Imada, K.' 11 ? 1 'Nagashima, S.' 12 ? 1 'Shaikh, T.R.' 13 ? 1 'Thomas, D.R.' 14 ? 1 'Chen, J.Z.' 15 ? 1 'Derosier, D.J.' 16 ? 1 'Kitao, A.' 17 ? 1 'Namba, K.' 18 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'FLAGELLAR HOOK PROTEIN FLGE' _entity.formula_weight 31335.084 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'FLGE31, RESIDUES 71-369' _entity.details 'FIT OF CRYSTAL STRUCTURE PDB ID 1WLG TO AN EM AMAP OF S. TYPHIMURIUM POLYHOOK' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTT ASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLK FNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQV LGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSK ; _entity_poly.pdbx_seq_one_letter_code_can ;GLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTT ASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLK FNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQV LGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 ASP n 1 4 VAL n 1 5 ALA n 1 6 ILE n 1 7 SER n 1 8 GLN n 1 9 ASN n 1 10 GLY n 1 11 PHE n 1 12 PHE n 1 13 ARG n 1 14 LEU n 1 15 VAL n 1 16 ASP n 1 17 SER n 1 18 ASN n 1 19 GLY n 1 20 SER n 1 21 VAL n 1 22 PHE n 1 23 TYR n 1 24 SER n 1 25 ARG n 1 26 ASN n 1 27 GLY n 1 28 GLN n 1 29 PHE n 1 30 LYS n 1 31 LEU n 1 32 ASP n 1 33 GLU n 1 34 ASN n 1 35 ARG n 1 36 ASN n 1 37 LEU n 1 38 VAL n 1 39 ASN n 1 40 MET n 1 41 GLN n 1 42 GLY n 1 43 MET n 1 44 GLN n 1 45 LEU n 1 46 THR n 1 47 GLY n 1 48 TYR n 1 49 PRO n 1 50 ALA n 1 51 THR n 1 52 GLY n 1 53 THR n 1 54 PRO n 1 55 PRO n 1 56 THR n 1 57 ILE n 1 58 GLN n 1 59 GLN n 1 60 GLY n 1 61 ALA n 1 62 ASN n 1 63 PRO n 1 64 ALA n 1 65 PRO n 1 66 ILE n 1 67 THR n 1 68 ILE n 1 69 PRO n 1 70 ASN n 1 71 THR n 1 72 LEU n 1 73 MET n 1 74 ALA n 1 75 ALA n 1 76 LYS n 1 77 SER n 1 78 THR n 1 79 THR n 1 80 THR n 1 81 ALA n 1 82 SER n 1 83 MET n 1 84 GLN n 1 85 ILE n 1 86 ASN n 1 87 LEU n 1 88 ASN n 1 89 SER n 1 90 THR n 1 91 ASP n 1 92 PRO n 1 93 VAL n 1 94 PRO n 1 95 SER n 1 96 LYS n 1 97 THR n 1 98 PRO n 1 99 PHE n 1 100 SER n 1 101 VAL n 1 102 SER n 1 103 ASP n 1 104 ALA n 1 105 ASP n 1 106 SER n 1 107 TYR n 1 108 ASN n 1 109 LYS n 1 110 LYS n 1 111 GLY n 1 112 THR n 1 113 VAL n 1 114 THR n 1 115 VAL n 1 116 TYR n 1 117 ASP n 1 118 SER n 1 119 GLN n 1 120 GLY n 1 121 ASN n 1 122 ALA n 1 123 HIS n 1 124 ASP n 1 125 MET n 1 126 ASN n 1 127 VAL n 1 128 TYR n 1 129 PHE n 1 130 VAL n 1 131 LYS n 1 132 THR n 1 133 LYS n 1 134 ASP n 1 135 ASN n 1 136 GLU n 1 137 TRP n 1 138 ALA n 1 139 VAL n 1 140 TYR n 1 141 THR n 1 142 HIS n 1 143 ASP n 1 144 SER n 1 145 SER n 1 146 ASP n 1 147 PRO n 1 148 ALA n 1 149 ALA n 1 150 THR n 1 151 ALA n 1 152 PRO n 1 153 THR n 1 154 THR n 1 155 ALA n 1 156 SER n 1 157 THR n 1 158 THR n 1 159 LEU n 1 160 LYS n 1 161 PHE n 1 162 ASN n 1 163 GLU n 1 164 ASN n 1 165 GLY n 1 166 ILE n 1 167 LEU n 1 168 GLU n 1 169 SER n 1 170 GLY n 1 171 GLY n 1 172 THR n 1 173 VAL n 1 174 ASN n 1 175 ILE n 1 176 THR n 1 177 THR n 1 178 GLY n 1 179 THR n 1 180 ILE n 1 181 ASN n 1 182 GLY n 1 183 ALA n 1 184 THR n 1 185 ALA n 1 186 ALA n 1 187 THR n 1 188 PHE n 1 189 SER n 1 190 LEU n 1 191 SER n 1 192 PHE n 1 193 LEU n 1 194 ASN n 1 195 SER n 1 196 MET n 1 197 GLN n 1 198 GLN n 1 199 ASN n 1 200 THR n 1 201 GLY n 1 202 ALA n 1 203 ASN n 1 204 ASN n 1 205 ILE n 1 206 VAL n 1 207 ALA n 1 208 THR n 1 209 ASN n 1 210 GLN n 1 211 ASN n 1 212 GLY n 1 213 TYR n 1 214 LYS n 1 215 PRO n 1 216 GLY n 1 217 ASP n 1 218 LEU n 1 219 VAL n 1 220 SER n 1 221 TYR n 1 222 GLN n 1 223 ILE n 1 224 ASN n 1 225 ASN n 1 226 ASP n 1 227 GLY n 1 228 THR n 1 229 VAL n 1 230 VAL n 1 231 GLY n 1 232 ASN n 1 233 TYR n 1 234 SER n 1 235 ASN n 1 236 GLU n 1 237 GLN n 1 238 GLU n 1 239 GLN n 1 240 VAL n 1 241 LEU n 1 242 GLY n 1 243 GLN n 1 244 ILE n 1 245 VAL n 1 246 LEU n 1 247 ALA n 1 248 ASN n 1 249 PHE n 1 250 ALA n 1 251 ASN n 1 252 ASN n 1 253 GLU n 1 254 GLY n 1 255 LEU n 1 256 ALA n 1 257 SER n 1 258 GLN n 1 259 GLY n 1 260 ASP n 1 261 ASN n 1 262 VAL n 1 263 TRP n 1 264 ALA n 1 265 ALA n 1 266 THR n 1 267 GLN n 1 268 ALA n 1 269 SER n 1 270 GLY n 1 271 VAL n 1 272 ALA n 1 273 LEU n 1 274 LEU n 1 275 GLY n 1 276 THR n 1 277 ALA n 1 278 GLY n 1 279 SER n 1 280 GLY n 1 281 ASN n 1 282 PHE n 1 283 GLY n 1 284 LYS n 1 285 LEU n 1 286 THR n 1 287 ASN n 1 288 GLY n 1 289 ALA n 1 290 LEU n 1 291 GLU n 1 292 ALA n 1 293 SER n 1 294 ASN n 1 295 VAL n 1 296 ASP n 1 297 LEU n 1 298 SER n 1 299 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SALMONELLA TYPHIMURIUM' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 602 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 71 71 GLY GLY A . n A 1 2 LEU 2 72 72 LEU LEU A . n A 1 3 ASP 3 73 73 ASP ASP A . n A 1 4 VAL 4 74 74 VAL VAL A . n A 1 5 ALA 5 75 75 ALA ALA A . n A 1 6 ILE 6 76 76 ILE ILE A . n A 1 7 SER 7 77 77 SER SER A . n A 1 8 GLN 8 78 78 GLN GLN A . n A 1 9 ASN 9 79 79 ASN ASN A . n A 1 10 GLY 10 80 80 GLY GLY A . n A 1 11 PHE 11 81 81 PHE PHE A . n A 1 12 PHE 12 82 82 PHE PHE A . n A 1 13 ARG 13 83 83 ARG ARG A . n A 1 14 LEU 14 84 84 LEU LEU A . n A 1 15 VAL 15 85 85 VAL VAL A . n A 1 16 ASP 16 86 86 ASP ASP A . n A 1 17 SER 17 87 87 SER SER A . n A 1 18 ASN 18 88 88 ASN ASN A . n A 1 19 GLY 19 89 89 GLY GLY A . n A 1 20 SER 20 90 90 SER SER A . n A 1 21 VAL 21 91 91 VAL VAL A . n A 1 22 PHE 22 92 92 PHE PHE A . n A 1 23 TYR 23 93 93 TYR TYR A . n A 1 24 SER 24 94 94 SER SER A . n A 1 25 ARG 25 95 95 ARG ARG A . n A 1 26 ASN 26 96 96 ASN ASN A . n A 1 27 GLY 27 97 97 GLY GLY A . n A 1 28 GLN 28 98 98 GLN GLN A . n A 1 29 PHE 29 99 99 PHE PHE A . n A 1 30 LYS 30 100 100 LYS LYS A . n A 1 31 LEU 31 101 101 LEU LEU A . n A 1 32 ASP 32 102 102 ASP ASP A . n A 1 33 GLU 33 103 103 GLU GLU A . n A 1 34 ASN 34 104 104 ASN ASN A . n A 1 35 ARG 35 105 105 ARG ARG A . n A 1 36 ASN 36 106 106 ASN ASN A . n A 1 37 LEU 37 107 107 LEU LEU A . n A 1 38 VAL 38 108 108 VAL VAL A . n A 1 39 ASN 39 109 109 ASN ASN A . n A 1 40 MET 40 110 110 MET MET A . n A 1 41 GLN 41 111 111 GLN GLN A . n A 1 42 GLY 42 112 112 GLY GLY A . n A 1 43 MET 43 113 113 MET MET A . n A 1 44 GLN 44 114 114 GLN GLN A . n A 1 45 LEU 45 115 115 LEU LEU A . n A 1 46 THR 46 116 116 THR THR A . n A 1 47 GLY 47 117 117 GLY GLY A . n A 1 48 TYR 48 118 118 TYR TYR A . n A 1 49 PRO 49 119 119 PRO PRO A . n A 1 50 ALA 50 120 120 ALA ALA A . n A 1 51 THR 51 121 121 THR THR A . n A 1 52 GLY 52 122 122 GLY GLY A . n A 1 53 THR 53 123 123 THR THR A . n A 1 54 PRO 54 124 124 PRO PRO A . n A 1 55 PRO 55 125 125 PRO PRO A . n A 1 56 THR 56 126 126 THR THR A . n A 1 57 ILE 57 127 127 ILE ILE A . n A 1 58 GLN 58 128 128 GLN GLN A . n A 1 59 GLN 59 129 129 GLN GLN A . n A 1 60 GLY 60 130 130 GLY GLY A . n A 1 61 ALA 61 131 131 ALA ALA A . n A 1 62 ASN 62 132 132 ASN ASN A . n A 1 63 PRO 63 133 133 PRO PRO A . n A 1 64 ALA 64 134 134 ALA ALA A . n A 1 65 PRO 65 135 135 PRO PRO A . n A 1 66 ILE 66 136 136 ILE ILE A . n A 1 67 THR 67 137 137 THR THR A . n A 1 68 ILE 68 138 138 ILE ILE A . n A 1 69 PRO 69 139 139 PRO PRO A . n A 1 70 ASN 70 140 140 ASN ASN A . n A 1 71 THR 71 141 141 THR THR A . n A 1 72 LEU 72 142 142 LEU LEU A . n A 1 73 MET 73 143 143 MET MET A . n A 1 74 ALA 74 144 144 ALA ALA A . n A 1 75 ALA 75 145 145 ALA ALA A . n A 1 76 LYS 76 146 146 LYS LYS A . n A 1 77 SER 77 147 147 SER SER A . n A 1 78 THR 78 148 148 THR THR A . n A 1 79 THR 79 149 149 THR THR A . n A 1 80 THR 80 150 150 THR THR A . n A 1 81 ALA 81 151 151 ALA ALA A . n A 1 82 SER 82 152 152 SER SER A . n A 1 83 MET 83 153 153 MET MET A . n A 1 84 GLN 84 154 154 GLN GLN A . n A 1 85 ILE 85 155 155 ILE ILE A . n A 1 86 ASN 86 156 156 ASN ASN A . n A 1 87 LEU 87 157 157 LEU LEU A . n A 1 88 ASN 88 158 158 ASN ASN A . n A 1 89 SER 89 159 159 SER SER A . n A 1 90 THR 90 160 160 THR THR A . n A 1 91 ASP 91 161 161 ASP ASP A . n A 1 92 PRO 92 162 162 PRO PRO A . n A 1 93 VAL 93 163 163 VAL VAL A . n A 1 94 PRO 94 164 164 PRO PRO A . n A 1 95 SER 95 165 165 SER SER A . n A 1 96 LYS 96 166 166 LYS LYS A . n A 1 97 THR 97 167 167 THR THR A . n A 1 98 PRO 98 168 168 PRO PRO A . n A 1 99 PHE 99 169 169 PHE PHE A . n A 1 100 SER 100 170 170 SER SER A . n A 1 101 VAL 101 171 171 VAL VAL A . n A 1 102 SER 102 172 172 SER SER A . n A 1 103 ASP 103 173 173 ASP ASP A . n A 1 104 ALA 104 174 174 ALA ALA A . n A 1 105 ASP 105 175 175 ASP ASP A . n A 1 106 SER 106 176 176 SER SER A . n A 1 107 TYR 107 177 177 TYR TYR A . n A 1 108 ASN 108 178 178 ASN ASN A . n A 1 109 LYS 109 179 179 LYS LYS A . n A 1 110 LYS 110 180 180 LYS LYS A . n A 1 111 GLY 111 181 181 GLY GLY A . n A 1 112 THR 112 182 182 THR THR A . n A 1 113 VAL 113 183 183 VAL VAL A . n A 1 114 THR 114 184 184 THR THR A . n A 1 115 VAL 115 185 185 VAL VAL A . n A 1 116 TYR 116 186 186 TYR TYR A . n A 1 117 ASP 117 187 187 ASP ASP A . n A 1 118 SER 118 188 188 SER SER A . n A 1 119 GLN 119 189 189 GLN GLN A . n A 1 120 GLY 120 190 190 GLY GLY A . n A 1 121 ASN 121 191 191 ASN ASN A . n A 1 122 ALA 122 192 192 ALA ALA A . n A 1 123 HIS 123 193 193 HIS HIS A . n A 1 124 ASP 124 194 194 ASP ASP A . n A 1 125 MET 125 195 195 MET MET A . n A 1 126 ASN 126 196 196 ASN ASN A . n A 1 127 VAL 127 197 197 VAL VAL A . n A 1 128 TYR 128 198 198 TYR TYR A . n A 1 129 PHE 129 199 199 PHE PHE A . n A 1 130 VAL 130 200 200 VAL VAL A . n A 1 131 LYS 131 201 201 LYS LYS A . n A 1 132 THR 132 202 202 THR THR A . n A 1 133 LYS 133 203 203 LYS LYS A . n A 1 134 ASP 134 204 204 ASP ASP A . n A 1 135 ASN 135 205 205 ASN ASN A . n A 1 136 GLU 136 206 206 GLU GLU A . n A 1 137 TRP 137 207 207 TRP TRP A . n A 1 138 ALA 138 208 208 ALA ALA A . n A 1 139 VAL 139 209 209 VAL VAL A . n A 1 140 TYR 140 210 210 TYR TYR A . n A 1 141 THR 141 211 211 THR THR A . n A 1 142 HIS 142 212 212 HIS HIS A . n A 1 143 ASP 143 213 213 ASP ASP A . n A 1 144 SER 144 214 214 SER SER A . n A 1 145 SER 145 215 215 SER SER A . n A 1 146 ASP 146 216 216 ASP ASP A . n A 1 147 PRO 147 217 217 PRO PRO A . n A 1 148 ALA 148 218 218 ALA ALA A . n A 1 149 ALA 149 219 219 ALA ALA A . n A 1 150 THR 150 220 220 THR THR A . n A 1 151 ALA 151 221 221 ALA ALA A . n A 1 152 PRO 152 222 222 PRO PRO A . n A 1 153 THR 153 223 223 THR THR A . n A 1 154 THR 154 224 224 THR THR A . n A 1 155 ALA 155 225 225 ALA ALA A . n A 1 156 SER 156 226 226 SER SER A . n A 1 157 THR 157 227 227 THR THR A . n A 1 158 THR 158 228 228 THR THR A . n A 1 159 LEU 159 229 229 LEU LEU A . n A 1 160 LYS 160 230 230 LYS LYS A . n A 1 161 PHE 161 231 231 PHE PHE A . n A 1 162 ASN 162 232 232 ASN ASN A . n A 1 163 GLU 163 233 233 GLU GLU A . n A 1 164 ASN 164 234 234 ASN ASN A . n A 1 165 GLY 165 235 235 GLY GLY A . n A 1 166 ILE 166 236 236 ILE ILE A . n A 1 167 LEU 167 237 237 LEU LEU A . n A 1 168 GLU 168 238 238 GLU GLU A . n A 1 169 SER 169 239 239 SER SER A . n A 1 170 GLY 170 240 240 GLY GLY A . n A 1 171 GLY 171 241 241 GLY GLY A . n A 1 172 THR 172 242 242 THR THR A . n A 1 173 VAL 173 243 243 VAL VAL A . n A 1 174 ASN 174 244 244 ASN ASN A . n A 1 175 ILE 175 245 245 ILE ILE A . n A 1 176 THR 176 246 246 THR THR A . n A 1 177 THR 177 247 247 THR THR A . n A 1 178 GLY 178 248 248 GLY GLY A . n A 1 179 THR 179 249 249 THR THR A . n A 1 180 ILE 180 250 250 ILE ILE A . n A 1 181 ASN 181 251 251 ASN ASN A . n A 1 182 GLY 182 252 252 GLY GLY A . n A 1 183 ALA 183 253 253 ALA ALA A . n A 1 184 THR 184 254 254 THR THR A . n A 1 185 ALA 185 255 255 ALA ALA A . n A 1 186 ALA 186 256 256 ALA ALA A . n A 1 187 THR 187 257 257 THR THR A . n A 1 188 PHE 188 258 258 PHE PHE A . n A 1 189 SER 189 259 259 SER SER A . n A 1 190 LEU 190 260 260 LEU LEU A . n A 1 191 SER 191 261 261 SER SER A . n A 1 192 PHE 192 262 262 PHE PHE A . n A 1 193 LEU 193 263 263 LEU LEU A . n A 1 194 ASN 194 264 264 ASN ASN A . n A 1 195 SER 195 265 265 SER SER A . n A 1 196 MET 196 266 266 MET MET A . n A 1 197 GLN 197 267 267 GLN GLN A . n A 1 198 GLN 198 268 268 GLN GLN A . n A 1 199 ASN 199 269 269 ASN ASN A . n A 1 200 THR 200 270 270 THR THR A . n A 1 201 GLY 201 271 271 GLY GLY A . n A 1 202 ALA 202 272 272 ALA ALA A . n A 1 203 ASN 203 273 273 ASN ASN A . n A 1 204 ASN 204 274 274 ASN ASN A . n A 1 205 ILE 205 275 275 ILE ILE A . n A 1 206 VAL 206 276 276 VAL VAL A . n A 1 207 ALA 207 277 277 ALA ALA A . n A 1 208 THR 208 278 278 THR THR A . n A 1 209 ASN 209 279 279 ASN ASN A . n A 1 210 GLN 210 280 280 GLN GLN A . n A 1 211 ASN 211 281 281 ASN ASN A . n A 1 212 GLY 212 282 282 GLY GLY A . n A 1 213 TYR 213 283 283 TYR TYR A . n A 1 214 LYS 214 284 284 LYS LYS A . n A 1 215 PRO 215 285 285 PRO PRO A . n A 1 216 GLY 216 286 286 GLY GLY A . n A 1 217 ASP 217 287 287 ASP ASP A . n A 1 218 LEU 218 288 288 LEU LEU A . n A 1 219 VAL 219 289 289 VAL VAL A . n A 1 220 SER 220 290 290 SER SER A . n A 1 221 TYR 221 291 291 TYR TYR A . n A 1 222 GLN 222 292 292 GLN GLN A . n A 1 223 ILE 223 293 293 ILE ILE A . n A 1 224 ASN 224 294 294 ASN ASN A . n A 1 225 ASN 225 295 295 ASN ASN A . n A 1 226 ASP 226 296 296 ASP ASP A . n A 1 227 GLY 227 297 297 GLY GLY A . n A 1 228 THR 228 298 298 THR THR A . n A 1 229 VAL 229 299 299 VAL VAL A . n A 1 230 VAL 230 300 300 VAL VAL A . n A 1 231 GLY 231 301 301 GLY GLY A . n A 1 232 ASN 232 302 302 ASN ASN A . n A 1 233 TYR 233 303 303 TYR TYR A . n A 1 234 SER 234 304 304 SER SER A . n A 1 235 ASN 235 305 305 ASN ASN A . n A 1 236 GLU 236 306 306 GLU GLU A . n A 1 237 GLN 237 307 307 GLN GLN A . n A 1 238 GLU 238 308 308 GLU GLU A . n A 1 239 GLN 239 309 309 GLN GLN A . n A 1 240 VAL 240 310 310 VAL VAL A . n A 1 241 LEU 241 311 311 LEU LEU A . n A 1 242 GLY 242 312 312 GLY GLY A . n A 1 243 GLN 243 313 313 GLN GLN A . n A 1 244 ILE 244 314 314 ILE ILE A . n A 1 245 VAL 245 315 315 VAL VAL A . n A 1 246 LEU 246 316 316 LEU LEU A . n A 1 247 ALA 247 317 317 ALA ALA A . n A 1 248 ASN 248 318 318 ASN ASN A . n A 1 249 PHE 249 319 319 PHE PHE A . n A 1 250 ALA 250 320 320 ALA ALA A . n A 1 251 ASN 251 321 321 ASN ASN A . n A 1 252 ASN 252 322 322 ASN ASN A . n A 1 253 GLU 253 323 323 GLU GLU A . n A 1 254 GLY 254 324 324 GLY GLY A . n A 1 255 LEU 255 325 325 LEU LEU A . n A 1 256 ALA 256 326 326 ALA ALA A . n A 1 257 SER 257 327 327 SER SER A . n A 1 258 GLN 258 328 328 GLN GLN A . n A 1 259 GLY 259 329 329 GLY GLY A . n A 1 260 ASP 260 330 330 ASP ASP A . n A 1 261 ASN 261 331 331 ASN ASN A . n A 1 262 VAL 262 332 332 VAL VAL A . n A 1 263 TRP 263 333 333 TRP TRP A . n A 1 264 ALA 264 334 334 ALA ALA A . n A 1 265 ALA 265 335 335 ALA ALA A . n A 1 266 THR 266 336 336 THR THR A . n A 1 267 GLN 267 337 337 GLN GLN A . n A 1 268 ALA 268 338 338 ALA ALA A . n A 1 269 SER 269 339 339 SER SER A . n A 1 270 GLY 270 340 340 GLY GLY A . n A 1 271 VAL 271 341 341 VAL VAL A . n A 1 272 ALA 272 342 342 ALA ALA A . n A 1 273 LEU 273 343 343 LEU LEU A . n A 1 274 LEU 274 344 344 LEU LEU A . n A 1 275 GLY 275 345 345 GLY GLY A . n A 1 276 THR 276 346 346 THR THR A . n A 1 277 ALA 277 347 347 ALA ALA A . n A 1 278 GLY 278 348 348 GLY GLY A . n A 1 279 SER 279 349 349 SER SER A . n A 1 280 GLY 280 350 350 GLY GLY A . n A 1 281 ASN 281 351 351 ASN ASN A . n A 1 282 PHE 282 352 352 PHE PHE A . n A 1 283 GLY 283 353 353 GLY GLY A . n A 1 284 LYS 284 354 354 LYS LYS A . n A 1 285 LEU 285 355 355 LEU LEU A . n A 1 286 THR 286 356 356 THR THR A . n A 1 287 ASN 287 357 357 ASN ASN A . n A 1 288 GLY 288 358 358 GLY GLY A . n A 1 289 ALA 289 359 359 ALA ALA A . n A 1 290 LEU 290 360 360 LEU LEU A . n A 1 291 GLU 291 361 361 GLU GLU A . n A 1 292 ALA 292 362 362 ALA ALA A . n A 1 293 SER 293 363 363 SER SER A . n A 1 294 ASN 294 364 ? ? ? A . n A 1 295 VAL 295 365 ? ? ? A . n A 1 296 ASP 296 366 ? ? ? A . n A 1 297 LEU 297 367 ? ? ? A . n A 1 298 SER 298 368 ? ? ? A . n A 1 299 LYS 299 369 ? ? ? A . n # _cell.entry_id 2BGZ _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BGZ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 2BGZ _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 2BGZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 9 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2156 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2156 _refine_hist.d_res_high 12.00 _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 2BGZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2BGZ _struct.title 'ATOMIC MODEL OF THE BACTERIAL FLAGELLAR BASED ON DOCKING AN X-RAY DERIVED HOOK STRUCTURE INTO AN EM MAP.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BGZ _struct_keywords.pdbx_keywords 'MOTOR PROTEIN' _struct_keywords.text 'MOTOR PROTEIN, BACTERIAL MOTIILITY, BACTERIAL FLAGELLAR HOOK, FLAGELLUM' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLGE_SALTY _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P16322 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2BGZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 299 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16322 _struct_ref_seq.db_align_beg 71 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 369 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 71 _struct_ref_seq.pdbx_auth_seq_align_end 369 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 251 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 255 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 321 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 325 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 53 A . ? THR 123 A PRO 54 A ? PRO 124 A 1 3.72 2 THR 97 A . ? THR 167 A PRO 98 A ? PRO 168 A 1 -7.95 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 3 ? AC ? 6 ? AD ? 4 ? AE ? 4 ? AF ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AC 4 5 ? anti-parallel AC 5 6 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? parallel AD 3 4 ? anti-parallel AE 1 2 ? anti-parallel AE 2 3 ? parallel AE 3 4 ? parallel AF 1 2 ? anti-parallel AF 2 3 ? anti-parallel AF 3 4 ? anti-parallel AF 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 2 ? ASP A 3 ? LEU A 72 ASP A 73 AA 2 GLN A 28 ? LEU A 31 ? GLN A 98 LEU A 101 AA 3 LEU A 37 ? VAL A 38 ? LEU A 107 VAL A 108 AB 1 ALA A 64 ? PRO A 65 ? ALA A 134 PRO A 135 AB 2 GLN A 44 ? TYR A 48 ? GLN A 114 TYR A 118 AB 3 PHE A 11 ? VAL A 15 ? PHE A 81 VAL A 85 AC 1 ALA A 64 ? PRO A 65 ? ALA A 134 PRO A 135 AC 2 GLN A 44 ? TYR A 48 ? GLN A 114 TYR A 118 AC 3 GLU A 238 ? ILE A 244 ? GLU A 308 ILE A 314 AC 4 THR A 228 ? ASN A 232 ? THR A 298 ASN A 302 AC 5 SER A 220 ? ILE A 223 ? SER A 290 ILE A 293 AC 6 ALA A 289 ? ALA A 292 ? ALA A 359 ALA A 362 AD 1 THR A 172 ? THR A 176 ? THR A 242 THR A 246 AD 2 THR A 187 ? SER A 191 ? THR A 257 SER A 261 AD 3 THR A 80 ? ASN A 88 ? THR A 150 ASN A 158 AD 4 ASN A 204 ? GLN A 210 ? ASN A 274 GLN A 280 AE 1 THR A 172 ? THR A 176 ? THR A 242 THR A 246 AE 2 THR A 187 ? SER A 191 ? THR A 257 SER A 261 AE 3 THR A 80 ? ASN A 88 ? THR A 150 ASN A 158 AE 4 MET A 196 ? GLN A 198 ? MET A 266 GLN A 268 AF 1 LYS A 109 ? TYR A 116 ? LYS A 179 TYR A 186 AF 2 ALA A 122 ? LYS A 133 ? ALA A 192 LYS A 203 AF 3 GLU A 136 ? ASP A 143 ? GLU A 206 ASP A 213 AF 4 THR A 157 ? PHE A 161 ? THR A 227 PHE A 231 AF 5 LEU A 167 ? SER A 169 ? LEU A 237 SER A 239 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 2 ? N LEU A 72 O PHE A 29 ? O PHE A 99 AA 2 3 N LYS A 30 ? N LYS A 100 O VAL A 38 ? O VAL A 108 AB 1 2 N ALA A 64 ? N ALA A 134 O GLY A 47 ? O GLY A 117 AB 2 3 N THR A 46 ? N THR A 116 O ARG A 13 ? O ARG A 83 AC 1 2 N ALA A 64 ? N ALA A 134 O GLY A 47 ? O GLY A 117 AC 2 3 N TYR A 48 ? N TYR A 118 O GLN A 243 ? O GLN A 313 AC 3 4 N LEU A 241 ? N LEU A 311 O VAL A 229 ? O VAL A 299 AC 4 5 N ASN A 232 ? N ASN A 302 O SER A 220 ? O SER A 290 AC 5 6 N ILE A 223 ? N ILE A 293 O ALA A 289 ? O ALA A 359 AD 1 2 N ILE A 175 ? N ILE A 245 O PHE A 188 ? O PHE A 258 AD 2 3 N SER A 191 ? N SER A 261 O ALA A 81 ? O ALA A 151 AD 3 4 N ASN A 86 ? N ASN A 156 O ASN A 204 ? O ASN A 274 AE 1 2 N ILE A 175 ? N ILE A 245 O PHE A 188 ? O PHE A 258 AE 2 3 N SER A 191 ? N SER A 261 O ALA A 81 ? O ALA A 151 AE 3 4 N LEU A 87 ? N LEU A 157 O MET A 196 ? O MET A 266 AF 1 2 N VAL A 115 ? N VAL A 185 O HIS A 123 ? O HIS A 193 AF 2 3 N THR A 132 ? N THR A 202 O GLU A 136 ? O GLU A 206 AF 3 4 N VAL A 139 ? N VAL A 209 O THR A 157 ? O THR A 227 AF 4 5 O LYS A 160 ? O LYS A 230 N GLU A 168 ? N GLU A 238 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CA A PRO 139 ? ? N A ASN 140 ? ? 1.19 2 1 C A PRO 139 ? ? CA A ASN 140 ? ? 1.36 3 1 CD1 A LEU 288 ? ? CA A TYR 303 ? ? 1.73 4 1 CG A LEU 288 ? ? N A VAL 289 ? ? 1.77 5 1 CD2 A LEU 288 ? ? O A ASN 302 ? ? 1.81 6 1 CD1 A LEU 288 ? ? C A TYR 303 ? ? 1.84 7 1 CD1 A LEU 288 ? ? N A SER 304 ? ? 1.98 8 1 CD A ARG 105 ? ? ND2 A ASN 140 ? ? 2.17 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 105 ? ? CZ A ARG 105 ? ? NH1 A ARG 105 ? ? 124.50 120.30 4.20 0.50 N 2 1 NE A ARG 105 ? ? CZ A ARG 105 ? ? NH2 A ARG 105 ? ? 117.11 120.30 -3.19 0.50 N 3 1 CA A PRO 139 ? ? C A PRO 139 ? ? N A ASN 140 ? ? 50.09 117.20 -67.11 2.20 Y 4 1 O A PRO 139 ? ? C A PRO 139 ? ? N A ASN 140 ? ? 157.55 122.70 34.85 1.60 Y 5 1 C A PRO 139 ? ? N A ASN 140 ? ? CA A ASN 140 ? ? 60.42 121.70 -61.28 2.50 Y 6 1 CG A MET 143 ? ? SD A MET 143 ? ? CE A MET 143 ? ? 109.83 100.20 9.63 1.60 N 7 1 CB A LEU 288 ? ? CA A LEU 288 ? ? C A LEU 288 ? ? 96.47 110.20 -13.73 1.90 N 8 1 N A VAL 289 ? ? CA A VAL 289 ? ? C A VAL 289 ? ? 128.37 111.00 17.37 2.70 N 9 1 CB A ASP 330 ? ? CG A ASP 330 ? ? OD2 A ASP 330 ? ? 123.71 118.30 5.41 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 263 ? ? -39.62 131.60 2 1 ASN A 264 ? ? 80.00 -0.39 3 1 PRO A 285 ? ? -54.02 107.94 4 1 LEU A 288 ? ? -114.10 -120.93 5 1 VAL A 289 ? ? -148.16 -76.72 6 1 ASP A 330 ? ? 50.11 -145.09 7 1 ASN A 357 ? ? -151.70 -55.41 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id PRO _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 139 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -10.96 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 2BGZ _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'METHOD--RECIPROCAL SPACE FITTING IN URO' _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 2BGZ _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.resolution 9 _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details ;HELICAL SYMMETRY OPERATORS CAN BE CALCULATED USING RISE PER SUBUNIT 4.226475A ROTATION PER SUBUNIT 23.48758 DEG. DATA USED IN REFINEMENT. RESOLUTION RANGE HIGH 12A, RESOLUTION RANGE LOW 200A, DATA CUTOFF (SIGMA(F)) 1, COMPLETENESS FOR RANGE 100(%) NUMBER OF REFLECTIONS 84. PROTEIN ATOMS 2156 ; _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '10 MM TRIS/HCL,5MM EDTA,0. 1%V/V TRITON X-100' _em_buffer.pH 8 _em_buffer.details '10 MM TRIS/HCL,5MM EDTA,0. 1%V/V TRITON X-100' # _em_entity_assembly.id 1 _em_entity_assembly.name POLYHOOK _em_entity_assembly.type COMPLEX _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_imaging.entry_id 2BGZ _em_imaging.id 1 _em_imaging.microscope_model 'FEI/PHILIPS CM200FEG' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.specimen_id 1 _em_imaging.date ? _em_imaging.temperature ? _em_imaging.nominal_defocus_min 1300 _em_imaging.nominal_defocus_max 2700 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.0 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_magnification 66000 _em_imaging.calibrated_magnification ? _em_imaging.accelerating_voltage 200 _em_imaging.details 'DATA FROM 262 INDIVIDUAL SEGMENTS OF HOOK IN FINAL MAP.' _em_imaging.specimen_holder_type . _em_imaging.specimen_holder_model . _em_imaging.citation_id ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'HOLEY CARBON' _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? # _em_vitrification.entry_id 2BGZ _em_vitrification.id 1 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.cryogen_name ETHANE _em_vitrification.specimen_id 1 _em_vitrification.details 'SAMPLES PREPARED AT 4 DEG C PLUNGED INTO LIQUID ETHANE' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 2BGZ _em_experiment.id 1 _em_experiment.aggregation_state '2D ARRAY' _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method CRYSTALLOGRAPHY # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 364 ? A ASN 294 2 1 Y 1 A VAL 365 ? A VAL 295 3 1 Y 1 A ASP 366 ? A ASP 296 4 1 Y 1 A LEU 367 ? A LEU 297 5 1 Y 1 A SER 368 ? A SER 298 6 1 Y 1 A LYS 369 ? A LYS 299 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 10 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id _em_software.imaging_id _em_software.fitting_id 1 RSRef ? 'MODEL FITTING' ? ? ? 1 2 'Brandeis Helical Package' ? RECONSTRUCTION ? 1 ? ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _atom_sites.entry_id 2BGZ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_