data_2BHO # _entry.id 2BHO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2BHO PDBE EBI-22418 WWPDB D_1290022418 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2BSH unspecified 'CRYSTAL STRUCTURE OF THE TYPE III SECRETION CHAPERONE SYCT FROM YERSINIA ENTEROCOLITICA (CRYSTAL FORM 2)' PDB 2BSI unspecified 'CRYSTAL STRUCTURE OF THE TYPE III SECRETION CHAPERONE SYCT FROM YERSINIA ENTEROCOLITICA (CRYSTAL FORM 1)' PDB 2BSJ unspecified 'NATIVE CRYSTAL STRUCTURE OF THE TYPE III SECRETION CHAPERONE SYCT FROM YERSINIA ENTEROCOLITICA' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BHO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-01-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Groll, M.' 1 'Wilharm, G.' 2 # _citation.id primary _citation.title 'Crystal Structure of the Yersinia Enterocolitica Type III Secretion Chaperone Syct' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 280 _citation.page_first 31149 _citation.page_last ? _citation.year 2005 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16000312 _citation.pdbx_database_id_DOI 10.1074/JBC.M500603200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Locher, M.' 1 ? primary 'Lehnert, B.' 2 ? primary 'Krauss, K.' 3 ? primary 'Heesemann, J.' 4 ? primary 'Groll, M.' 5 ? primary 'Wilharm, G.' 6 ? # _cell.entry_id 2BHO _cell.length_a 91.170 _cell.length_b 45.834 _cell.length_c 34.453 _cell.angle_alpha 90.00 _cell.angle_beta 105.29 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BHO _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CHAPERONE PROTEIN SYCT' 15180.002 1 ? ? ? ? 2 non-polymer syn 'PLATINUM (II) ION' 195.078 1 ? ? ? ? 3 water nat water 18.015 22 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQTTFTELMQQLFLKLGLNHQVNENDVYTFEVDGHIQVLIACYHQQWVQLFSELGADLPTNDNLFGEHWPAHVQGRLDGK PILWSQQSLVGLDIDEMQAWLERFIDDIEQRKEPQNTKFQPNSTSPILFI ; _entity_poly.pdbx_seq_one_letter_code_can ;MQTTFTELMQQLFLKLGLNHQVNENDVYTFEVDGHIQVLIACYHQQWVQLFSELGADLPTNDNLFGEHWPAHVQGRLDGK PILWSQQSLVGLDIDEMQAWLERFIDDIEQRKEPQNTKFQPNSTSPILFI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 THR n 1 4 THR n 1 5 PHE n 1 6 THR n 1 7 GLU n 1 8 LEU n 1 9 MET n 1 10 GLN n 1 11 GLN n 1 12 LEU n 1 13 PHE n 1 14 LEU n 1 15 LYS n 1 16 LEU n 1 17 GLY n 1 18 LEU n 1 19 ASN n 1 20 HIS n 1 21 GLN n 1 22 VAL n 1 23 ASN n 1 24 GLU n 1 25 ASN n 1 26 ASP n 1 27 VAL n 1 28 TYR n 1 29 THR n 1 30 PHE n 1 31 GLU n 1 32 VAL n 1 33 ASP n 1 34 GLY n 1 35 HIS n 1 36 ILE n 1 37 GLN n 1 38 VAL n 1 39 LEU n 1 40 ILE n 1 41 ALA n 1 42 CYS n 1 43 TYR n 1 44 HIS n 1 45 GLN n 1 46 GLN n 1 47 TRP n 1 48 VAL n 1 49 GLN n 1 50 LEU n 1 51 PHE n 1 52 SER n 1 53 GLU n 1 54 LEU n 1 55 GLY n 1 56 ALA n 1 57 ASP n 1 58 LEU n 1 59 PRO n 1 60 THR n 1 61 ASN n 1 62 ASP n 1 63 ASN n 1 64 LEU n 1 65 PHE n 1 66 GLY n 1 67 GLU n 1 68 HIS n 1 69 TRP n 1 70 PRO n 1 71 ALA n 1 72 HIS n 1 73 VAL n 1 74 GLN n 1 75 GLY n 1 76 ARG n 1 77 LEU n 1 78 ASP n 1 79 GLY n 1 80 LYS n 1 81 PRO n 1 82 ILE n 1 83 LEU n 1 84 TRP n 1 85 SER n 1 86 GLN n 1 87 GLN n 1 88 SER n 1 89 LEU n 1 90 VAL n 1 91 GLY n 1 92 LEU n 1 93 ASP n 1 94 ILE n 1 95 ASP n 1 96 GLU n 1 97 MET n 1 98 GLN n 1 99 ALA n 1 100 TRP n 1 101 LEU n 1 102 GLU n 1 103 ARG n 1 104 PHE n 1 105 ILE n 1 106 ASP n 1 107 ASP n 1 108 ILE n 1 109 GLU n 1 110 GLN n 1 111 ARG n 1 112 LYS n 1 113 GLU n 1 114 PRO n 1 115 GLN n 1 116 ASN n 1 117 THR n 1 118 LYS n 1 119 PHE n 1 120 GLN n 1 121 PRO n 1 122 ASN n 1 123 SER n 1 124 THR n 1 125 SER n 1 126 PRO n 1 127 ILE n 1 128 LEU n 1 129 PHE n 1 130 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'YERSINIA ENTEROCOLITICA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant PLYSS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector T7 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMS470 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SYCT_YEREN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O85243 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2BHO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O85243 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -1 _struct_ref_seq.pdbx_auth_seq_align_end 128 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2BHO _struct_ref_seq_dif.mon_id PRO _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 81 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O85243 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 81 _struct_ref_seq_dif.details variant _struct_ref_seq_dif.pdbx_auth_seq_num 79 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2BHO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.34 _exptl_crystal.density_percent_sol 46 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.2 M DL-MALIC ACID, PH 7.0 100MM BIS-TRIS PROPANE, PH 7.0' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-03-14 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0723 1.0 2 1.0719 1.0 3 0.98 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MPG/DESY, HAMBURG BEAMLINE BW6' _diffrn_source.pdbx_synchrotron_site 'MPG/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW6 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '1.0723, 1.0719, 0.98' # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2BHO _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 99.000 _reflns.d_resolution_high 2.500 _reflns.number_obs 99007 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.03000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 36.5000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.500 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.51 _reflns_shell.d_res_low 2.54 _reflns_shell.percent_possible_all 88.9 _reflns_shell.Rmerge_I_obs 0.13000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.000 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2BHO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 3790 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.245 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.244 _refine.ls_R_factor_R_free 0.259 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.200 _refine.ls_number_reflns_R_free 432 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.923 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 44.45 _refine.aniso_B[1][1] -5.01000 _refine.aniso_B[2][2] 10.16000 _refine.aniso_B[3][3] -5.79000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -1.23000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 2.546 _refine.pdbx_overall_ESU_R_Free 0.348 _refine.overall_SU_ML 0.298 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 32.085 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 909 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 932 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.021 ? 932 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 807 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.256 1.920 ? 1267 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.592 3.000 ? 1881 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 1.170 5.000 ? 109 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45.897 25.741 ? 54 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.052 15.000 ? 156 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 29.771 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.096 0.200 ? 136 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1045 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.005 0.020 ? 186 'X-RAY DIFFRACTION' ? r_nbd_refined 0.274 0.200 ? 249 'X-RAY DIFFRACTION' ? r_nbd_other 0.310 0.200 ? 863 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.188 0.200 ? 451 'X-RAY DIFFRACTION' ? r_nbtor_other 0.120 0.200 ? 457 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.166 0.200 ? 27 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.345 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.298 0.200 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.035 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.505 1.500 ? 714 'X-RAY DIFFRACTION' ? r_mcbond_other 0.472 1.500 ? 226 'X-RAY DIFFRACTION' ? r_mcangle_it 3.048 2.000 ? 879 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.674 3.000 ? 458 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 6.413 4.500 ? 388 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.67 _refine_ls_shell.number_reflns_R_work 278 _refine_ls_shell.R_factor_R_work 0.3080 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.3580 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 28 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2BHO _struct.title 'Crystal structure of the Yersinia enterocolitica type III secretion chaperone SycT' _struct.pdbx_descriptor 'CHAPERONE PROTEIN SYCT' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BHO _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text 'YERSINIA, CHAPERONE, SECRETION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 4 ? GLY A 17 ? THR A 2 GLY A 15 1 ? 14 HELX_P HELX_P2 2 ASP A 93 ? LYS A 112 ? ASP A 91 LYS A 110 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id PT _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id PT _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id HIS _struct_conn.ptnr2_label_seq_id 44 _struct_conn.ptnr2_label_atom_id ND1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PT _struct_conn.ptnr1_auth_seq_id 1111 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HIS _struct_conn.ptnr2_auth_seq_id 42 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.253 _struct_conn.pdbx_value_order ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 69 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 67 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 70 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 68 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.37 # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLN A 21 ? VAL A 22 ? GLN A 19 VAL A 20 AA 2 TYR A 28 ? VAL A 32 ? TYR A 26 VAL A 30 AA 3 ILE A 36 ? TYR A 43 ? ILE A 34 TYR A 41 AA 4 TRP A 47 ? GLU A 53 ? TRP A 45 GLU A 51 AA 5 LYS A 80 ? SER A 88 ? LYS A 78 SER A 86 AA 6 VAL A 73 ? LEU A 77 ? VAL A 71 LEU A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLN A 21 ? N GLN A 19 O THR A 29 ? O THR A 27 AA 2 3 N VAL A 32 ? N VAL A 30 O ILE A 36 ? O ILE A 34 AA 3 4 N TYR A 43 ? N TYR A 41 O TRP A 47 ? O TRP A 45 AA 4 5 N SER A 52 ? N SER A 50 O LEU A 83 ? O LEU A 81 AA 5 6 N TRP A 84 ? N TRP A 82 O VAL A 73 ? O VAL A 71 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE PT A1111' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id HIS _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 44 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id HIS _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 42 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _database_PDB_matrix.entry_id 2BHO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2BHO _atom_sites.fract_transf_matrix[1][1] 0.010969 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002999 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021818 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.030090 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O PT S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 GLN 2 0 ? ? ? A . n A 1 3 THR 3 1 1 THR THR A . n A 1 4 THR 4 2 2 THR THR A . n A 1 5 PHE 5 3 3 PHE PHE A . n A 1 6 THR 6 4 4 THR THR A . n A 1 7 GLU 7 5 5 GLU GLU A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 MET 9 7 7 MET MET A . n A 1 10 GLN 10 8 8 GLN GLN A . n A 1 11 GLN 11 9 9 GLN GLN A . n A 1 12 LEU 12 10 10 LEU LEU A . n A 1 13 PHE 13 11 11 PHE PHE A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 LEU 16 14 14 LEU LEU A . n A 1 17 GLY 17 15 15 GLY GLY A . n A 1 18 LEU 18 16 16 LEU LEU A . n A 1 19 ASN 19 17 17 ASN ASN A . n A 1 20 HIS 20 18 18 HIS HIS A . n A 1 21 GLN 21 19 19 GLN GLN A . n A 1 22 VAL 22 20 20 VAL VAL A . n A 1 23 ASN 23 21 21 ASN ASN A . n A 1 24 GLU 24 22 22 GLU GLU A . n A 1 25 ASN 25 23 23 ASN ASN A . n A 1 26 ASP 26 24 24 ASP ASP A . n A 1 27 VAL 27 25 25 VAL VAL A . n A 1 28 TYR 28 26 26 TYR TYR A . n A 1 29 THR 29 27 27 THR THR A . n A 1 30 PHE 30 28 28 PHE PHE A . n A 1 31 GLU 31 29 29 GLU GLU A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 ASP 33 31 31 ASP ASP A . n A 1 34 GLY 34 32 32 GLY GLY A . n A 1 35 HIS 35 33 33 HIS HIS A . n A 1 36 ILE 36 34 34 ILE ILE A . n A 1 37 GLN 37 35 35 GLN GLN A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 LEU 39 37 37 LEU LEU A . n A 1 40 ILE 40 38 38 ILE ILE A . n A 1 41 ALA 41 39 39 ALA ALA A . n A 1 42 CYS 42 40 40 CYS CYS A . n A 1 43 TYR 43 41 41 TYR TYR A . n A 1 44 HIS 44 42 42 HIS HIS A . n A 1 45 GLN 45 43 43 GLN GLN A . n A 1 46 GLN 46 44 44 GLN GLN A . n A 1 47 TRP 47 45 45 TRP TRP A . n A 1 48 VAL 48 46 46 VAL VAL A . n A 1 49 GLN 49 47 47 GLN GLN A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 PHE 51 49 49 PHE PHE A . n A 1 52 SER 52 50 50 SER SER A . n A 1 53 GLU 53 51 51 GLU GLU A . n A 1 54 LEU 54 52 52 LEU LEU A . n A 1 55 GLY 55 53 53 GLY GLY A . n A 1 56 ALA 56 54 54 ALA ALA A . n A 1 57 ASP 57 55 55 ASP ASP A . n A 1 58 LEU 58 56 56 LEU LEU A . n A 1 59 PRO 59 57 57 PRO PRO A . n A 1 60 THR 60 58 58 THR THR A . n A 1 61 ASN 61 59 59 ASN ASN A . n A 1 62 ASP 62 60 60 ASP ASP A . n A 1 63 ASN 63 61 61 ASN ASN A . n A 1 64 LEU 64 62 62 LEU LEU A . n A 1 65 PHE 65 63 63 PHE PHE A . n A 1 66 GLY 66 64 64 GLY GLY A . n A 1 67 GLU 67 65 65 GLU GLU A . n A 1 68 HIS 68 66 66 HIS HIS A . n A 1 69 TRP 69 67 67 TRP TRP A . n A 1 70 PRO 70 68 68 PRO PRO A . n A 1 71 ALA 71 69 69 ALA ALA A . n A 1 72 HIS 72 70 70 HIS HIS A . n A 1 73 VAL 73 71 71 VAL VAL A . n A 1 74 GLN 74 72 72 GLN GLN A . n A 1 75 GLY 75 73 73 GLY GLY A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 ASP 78 76 76 ASP ASP A . n A 1 79 GLY 79 77 77 GLY GLY A . n A 1 80 LYS 80 78 78 LYS LYS A . n A 1 81 PRO 81 79 79 PRO PRO A . n A 1 82 ILE 82 80 80 ILE ILE A . n A 1 83 LEU 83 81 81 LEU LEU A . n A 1 84 TRP 84 82 82 TRP TRP A . n A 1 85 SER 85 83 83 SER SER A . n A 1 86 GLN 86 84 84 GLN GLN A . n A 1 87 GLN 87 85 85 GLN GLN A . n A 1 88 SER 88 86 86 SER SER A . n A 1 89 LEU 89 87 87 LEU LEU A . n A 1 90 VAL 90 88 88 VAL VAL A . n A 1 91 GLY 91 89 89 GLY GLY A . n A 1 92 LEU 92 90 90 LEU LEU A . n A 1 93 ASP 93 91 91 ASP ASP A . n A 1 94 ILE 94 92 92 ILE ILE A . n A 1 95 ASP 95 93 93 ASP ASP A . n A 1 96 GLU 96 94 94 GLU GLU A . n A 1 97 MET 97 95 95 MET MET A . n A 1 98 GLN 98 96 96 GLN GLN A . n A 1 99 ALA 99 97 97 ALA ALA A . n A 1 100 TRP 100 98 98 TRP TRP A . n A 1 101 LEU 101 99 99 LEU LEU A . n A 1 102 GLU 102 100 100 GLU GLU A . n A 1 103 ARG 103 101 101 ARG ARG A . n A 1 104 PHE 104 102 102 PHE PHE A . n A 1 105 ILE 105 103 103 ILE ILE A . n A 1 106 ASP 106 104 104 ASP ASP A . n A 1 107 ASP 107 105 105 ASP ASP A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 GLU 109 107 107 GLU GLU A . n A 1 110 GLN 110 108 108 GLN GLN A . n A 1 111 ARG 111 109 109 ARG ARG A . n A 1 112 LYS 112 110 110 LYS LYS A . n A 1 113 GLU 113 111 ? ? ? A . n A 1 114 PRO 114 112 ? ? ? A . n A 1 115 GLN 115 113 ? ? ? A . n A 1 116 ASN 116 114 ? ? ? A . n A 1 117 THR 117 115 ? ? ? A . n A 1 118 LYS 118 116 ? ? ? A . n A 1 119 PHE 119 117 ? ? ? A . n A 1 120 GLN 120 118 ? ? ? A . n A 1 121 PRO 121 119 ? ? ? A . n A 1 122 ASN 122 120 ? ? ? A . n A 1 123 SER 123 121 ? ? ? A . n A 1 124 THR 124 122 ? ? ? A . n A 1 125 SER 125 123 ? ? ? A . n A 1 126 PRO 126 124 ? ? ? A . n A 1 127 ILE 127 125 ? ? ? A . n A 1 128 LEU 128 126 ? ? ? A . n A 1 129 PHE 129 127 ? ? ? A . n A 1 130 ILE 130 128 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT 1 1111 1111 PT PT A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 -9.0854179919 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 33.2334829489 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2015 ? C HOH . 2 1 A HOH 2016 ? C HOH . 3 1 A HOH 2017 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_database_status 2 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_sf' 2 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 4.4751 _pdbx_refine_tls.origin_y -3.2598 _pdbx_refine_tls.origin_z 24.0678 _pdbx_refine_tls.T[1][1] 0.1023 _pdbx_refine_tls.T[2][2] 0.2339 _pdbx_refine_tls.T[3][3] 0.1428 _pdbx_refine_tls.T[1][2] 0.0145 _pdbx_refine_tls.T[1][3] -0.0564 _pdbx_refine_tls.T[2][3] -0.0709 _pdbx_refine_tls.L[1][1] 9.3639 _pdbx_refine_tls.L[2][2] 6.1189 _pdbx_refine_tls.L[3][3] 10.9208 _pdbx_refine_tls.L[1][2] 0.3748 _pdbx_refine_tls.L[1][3] 0.3366 _pdbx_refine_tls.L[2][3] -1.1418 _pdbx_refine_tls.S[1][1] 0.0302 _pdbx_refine_tls.S[1][2] -1.0058 _pdbx_refine_tls.S[1][3] 0.0440 _pdbx_refine_tls.S[2][1] 0.5266 _pdbx_refine_tls.S[2][2] -0.0325 _pdbx_refine_tls.S[2][3] -0.3539 _pdbx_refine_tls.S[3][1] -0.2512 _pdbx_refine_tls.S[3][2] 1.2821 _pdbx_refine_tls.S[3][3] 0.0023 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 110 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHELX phasing . ? 4 # _pdbx_entry_details.entry_id 2BHO _pdbx_entry_details.compound_details 'IT IS AS A SPECIFIC CHAPERONE FOR YOPT' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'VARIANT S -> P (IN PLASMID PYVE8081 AND PLASMID PYVA127/90).' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 21 ? ? -90.32 -158.81 2 1 ASP A 24 ? ? 71.01 43.47 3 1 ASP A 31 ? ? 61.89 -121.67 4 1 GLN A 44 ? ? -139.40 -38.52 5 1 ALA A 54 ? ? -141.11 51.24 6 1 PRO A 57 ? ? -57.88 -9.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A GLN 0 ? A GLN 2 3 1 Y 1 A GLU 111 ? A GLU 113 4 1 Y 1 A PRO 112 ? A PRO 114 5 1 Y 1 A GLN 113 ? A GLN 115 6 1 Y 1 A ASN 114 ? A ASN 116 7 1 Y 1 A THR 115 ? A THR 117 8 1 Y 1 A LYS 116 ? A LYS 118 9 1 Y 1 A PHE 117 ? A PHE 119 10 1 Y 1 A GLN 118 ? A GLN 120 11 1 Y 1 A PRO 119 ? A PRO 121 12 1 Y 1 A ASN 120 ? A ASN 122 13 1 Y 1 A SER 121 ? A SER 123 14 1 Y 1 A THR 122 ? A THR 124 15 1 Y 1 A SER 123 ? A SER 125 16 1 Y 1 A PRO 124 ? A PRO 126 17 1 Y 1 A ILE 125 ? A ILE 127 18 1 Y 1 A LEU 126 ? A LEU 128 19 1 Y 1 A PHE 127 ? A PHE 129 20 1 Y 1 A ILE 128 ? A ILE 130 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PLATINUM (II) ION' PT 3 water HOH #