data_2BJ2 # _entry.id 2BJ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2BJ2 pdb_00002bj2 10.2210/pdb2bj2/pdb WWPDB D_1000177833 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1BJ2 _pdbx_database_related.details 'ENSEMBLE OF 8 STRUCTURES' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BJ2 _pdbx_database_status.recvd_initial_deposition_date 1998-07-02 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, A.J.' 1 'Crothers, D.M.' 2 # _citation.id primary _citation.title 'The solution structure of an RNA loop-loop complex: the ColE1 inverted loop sequence.' _citation.journal_abbrev Structure _citation.journal_volume 6 _citation.page_first 993 _citation.page_last 1005 _citation.year 1998 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9739090 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(98)00101-4' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, A.J.' 1 ? primary 'Crothers, D.M.' 2 ? # _cell.entry_id 2BJ2 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BJ2 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*AP*UP*GP*GP*UP*UP*CP*GP*UP*UP*GP*CP*C)-3') ; 6761.044 1 ? ? ? 'THE LOOP-LOOP COMPLEX HAS INVERTED LOOP SEQUENCE' 2 polymer syn ;RNA (5'-R(*GP*CP*AP*CP*CP*GP*AP*AP*CP*CP*AP*UP*CP*CP*GP*GP*UP*GP*C)-3') ; 6051.681 1 ? ? ? 'THE LOOP-LOOP COMPLEX HAS INVERTED LOOP SEQUENCE' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGCAACGGAUGGUUCGUUGCC GGCAACGGAUGGUUCGUUGCC A ? 2 polyribonucleotide no no GCACCGAACCAUCCGGUGC GCACCGAACCAUCCGGUGC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 A n 1 5 A n 1 6 C n 1 7 G n 1 8 G n 1 9 A n 1 10 U n 1 11 G n 1 12 G n 1 13 U n 1 14 U n 1 15 C n 1 16 G n 1 17 U n 1 18 U n 1 19 G n 1 20 C n 1 21 C n 2 1 G n 2 2 C n 2 3 A n 2 4 C n 2 5 C n 2 6 G n 2 7 A n 2 8 A n 2 9 C n 2 10 C n 2 11 A n 2 12 U n 2 13 C n 2 14 C n 2 15 G n 2 16 G n 2 17 U n 2 18 G n 2 19 C n # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 2BJ2 2BJ2 ? ? ? 2 2 PDB 2BJ2 2BJ2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2BJ2 A 1 ? 21 ? 2BJ2 1 ? 21 ? 1 21 2 2 2BJ2 B 1 ? 19 ? 2BJ2 1 ? 19 ? 1 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 DQF-COSY 1 3 1 '15N/14N SELECTED NOESY' 1 4 1 '13C/12C SELECTED NOESY' 1 5 1 HCCH-COSY 1 6 1 HCCH-COSY 1 7 1 31P 1 8 1 MQHCN 1 9 1 13C-HMQC 1 10 1 15N-HMQC 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength '25 mM' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents H2O # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 UNITY Varian 500 2 UNITY GE 600 3 OMEGA GE 600 # _pdbx_nmr_refine.entry_id 2BJ2 _pdbx_nmr_refine.method 'TORSION ANGLE MOLECULAR DYNAMICS' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2BJ2 _pdbx_nmr_details.text 'THE STRUCTURE WAS DETERMINED USING DOUBLE AND TRIPLE RESONANCE NMR SPECTROSCOPY ON 13C, 15N LABELED RNA.' # _pdbx_nmr_ensemble.entry_id 2BJ2 _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria 'NO EXPERIMENTAL DATA VIOLATIONS' # _pdbx_nmr_representative.entry_id 2BJ2 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.851 BRUNGER 1 'structure solution' X-PLOR ? ? 2 # _exptl.entry_id 2BJ2 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2BJ2 _struct.title 'RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BJ2 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'COLE1 RNA, LOOP-LOOP COMPLEX, KISS COMPLEX, RIBONUCLEIC ACID, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 1 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 1 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 1 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 20 N3 ? ? A G 2 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 20 O2 ? ? A G 2 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 20 N4 ? ? A G 2 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 19 N1 ? ? A C 3 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 19 O6 ? ? A C 3 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 19 N2 ? ? A C 3 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 18 N3 ? ? A A 4 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 4 N6 ? ? ? 1_555 A U 18 O4 ? ? A A 4 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 17 N3 ? ? A A 5 A U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 17 O4 ? ? A A 5 A U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 16 N1 ? ? A C 6 A G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 16 O6 ? ? A C 6 A G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 16 N2 ? ? A C 6 A G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 7 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 7 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 7 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 13 N3 ? ? A G 8 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 13 O2 ? ? A G 8 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 13 N4 ? ? A G 8 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 9 N1 ? ? ? 1_555 B U 12 N3 ? ? A A 9 B U 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A A 9 N6 ? ? ? 1_555 B U 12 O4 ? ? A A 9 B U 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 10 N3 ? ? ? 1_555 B A 11 N1 ? ? A U 10 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A U 10 O4 ? ? ? 1_555 B A 11 N6 ? ? A U 10 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 B C 10 N3 ? ? A G 11 B C 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 B C 10 O2 ? ? A G 11 B C 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 B C 10 N4 ? ? A G 11 B C 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 12 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 12 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 12 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 12 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 12 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 12 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 13 N3 ? ? ? 1_555 B A 8 N1 ? ? A U 13 B A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 13 O4 ? ? ? 1_555 B A 8 N6 ? ? A U 13 B A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A U 14 N3 ? ? ? 1_555 B A 7 N1 ? ? A U 14 B A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A U 14 O4 ? ? ? 1_555 B A 7 N6 ? ? A U 14 B A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 19 N3 ? ? B G 1 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 19 O2 ? ? B G 1 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 19 N4 ? ? B G 1 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 18 N1 ? ? B C 2 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 18 O6 ? ? B C 2 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 18 N2 ? ? B C 2 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 17 N3 ? ? B A 3 B U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 17 O4 ? ? B A 3 B U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 16 N1 ? ? B C 4 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 16 O6 ? ? B C 4 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 16 N2 ? ? B C 4 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 15 N1 ? ? B C 5 B G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 15 O6 ? ? B C 5 B G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 15 N2 ? ? B C 5 B G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 14 N3 ? ? B G 6 B C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 14 O2 ? ? B G 6 B C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 14 N4 ? ? B G 6 B C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2BJ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2BJ2 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 A 4 4 4 A A A . n A 1 5 A 5 5 5 A A A . n A 1 6 C 6 6 6 C C A . n A 1 7 G 7 7 7 G G A . n A 1 8 G 8 8 8 G G A . n A 1 9 A 9 9 9 A A A . n A 1 10 U 10 10 10 U U A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 U 13 13 13 U U A . n A 1 14 U 14 14 14 U U A . n A 1 15 C 15 15 15 C C A . n A 1 16 G 16 16 16 G G A . n A 1 17 U 17 17 17 U U A . n A 1 18 U 18 18 18 U U A . n A 1 19 G 19 19 19 G G A . n A 1 20 C 20 20 20 C C A . n A 1 21 C 21 21 21 C C A . n B 2 1 G 1 1 1 G G B . n B 2 2 C 2 2 2 C C B . n B 2 3 A 3 3 3 A A B . n B 2 4 C 4 4 4 C C B . n B 2 5 C 5 5 5 C C B . n B 2 6 G 6 6 6 G G B . n B 2 7 A 7 7 7 A A B . n B 2 8 A 8 8 8 A A B . n B 2 9 C 9 9 9 C C B . n B 2 10 C 10 10 10 C C B . n B 2 11 A 11 11 11 A A B . n B 2 12 U 12 12 12 U U B . n B 2 13 C 13 13 13 C C B . n B 2 14 C 14 14 14 C C B . n B 2 15 G 15 15 15 G G B . n B 2 16 G 16 16 16 G G B . n B 2 17 U 17 17 17 U U B . n B 2 18 G 18 18 18 G G B . n B 2 19 C 19 19 19 C C B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-02-02 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.851 ? 1 X-PLOR refinement 3.851 ? 2 X-PLOR phasing 3.851 ? 3 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 A G 1 ? ? C2 A G 1 ? ? N3 A G 1 ? ? 128.34 123.90 4.44 0.60 N 2 1 N3 A G 1 ? ? C2 A G 1 ? ? N2 A G 1 ? ? 113.27 119.90 -6.63 0.70 N 3 1 N1 A G 1 ? ? C6 A G 1 ? ? O6 A G 1 ? ? 115.91 119.90 -3.99 0.60 N 4 1 N1 A G 2 ? ? C2 A G 2 ? ? N3 A G 2 ? ? 129.13 123.90 5.23 0.60 N 5 1 N3 A G 2 ? ? C2 A G 2 ? ? N2 A G 2 ? ? 112.52 119.90 -7.38 0.70 N 6 1 N1 A G 2 ? ? C6 A G 2 ? ? O6 A G 2 ? ? 116.23 119.90 -3.67 0.60 N 7 1 C5 A G 2 ? ? C6 A G 2 ? ? O6 A G 2 ? ? 132.21 128.60 3.61 0.60 N 8 1 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 114.24 108.50 5.74 0.70 N 9 1 N1 A A 4 ? ? C6 A A 4 ? ? N6 A A 4 ? ? 112.44 118.60 -6.16 0.60 N 10 1 C5 A A 4 ? ? C6 A A 4 ? ? N6 A A 4 ? ? 129.68 123.70 5.98 0.80 N 11 1 N1 A A 5 ? ? C6 A A 5 ? ? N6 A A 5 ? ? 113.12 118.60 -5.48 0.60 N 12 1 C5 A A 5 ? ? C6 A A 5 ? ? N6 A A 5 ? ? 129.01 123.70 5.31 0.80 N 13 1 C6 A C 6 ? ? N1 A C 6 ? ? C2 A C 6 ? ? 117.84 120.30 -2.46 0.40 N 14 1 N1 A G 7 ? ? C2 A G 7 ? ? N3 A G 7 ? ? 129.06 123.90 5.16 0.60 N 15 1 N3 A G 7 ? ? C2 A G 7 ? ? N2 A G 7 ? ? 113.04 119.90 -6.86 0.70 N 16 1 "C5'" A G 8 ? ? "C4'" A G 8 ? ? "O4'" A G 8 ? ? 101.80 109.10 -7.30 1.20 N 17 1 N1 A G 8 ? ? C2 A G 8 ? ? N3 A G 8 ? ? 128.78 123.90 4.88 0.60 N 18 1 N3 A G 8 ? ? C2 A G 8 ? ? N2 A G 8 ? ? 111.66 119.90 -8.24 0.70 N 19 1 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 113.42 118.60 -5.18 0.60 N 20 1 N1 A G 11 ? ? C2 A G 11 ? ? N3 A G 11 ? ? 128.30 123.90 4.40 0.60 N 21 1 N3 A G 11 ? ? C2 A G 11 ? ? N2 A G 11 ? ? 112.92 119.90 -6.98 0.70 N 22 1 N1 A G 12 ? ? C2 A G 12 ? ? N3 A G 12 ? ? 128.28 123.90 4.38 0.60 N 23 1 N1 A G 12 ? ? C6 A G 12 ? ? O6 A G 12 ? ? 115.43 119.90 -4.47 0.60 N 24 1 C5 A G 12 ? ? C6 A G 12 ? ? O6 A G 12 ? ? 133.44 128.60 4.84 0.60 N 25 1 "O4'" A C 15 ? ? "C1'" A C 15 ? ? N1 A C 15 ? ? 112.79 108.50 4.29 0.70 N 26 1 C6 A C 15 ? ? N1 A C 15 ? ? C2 A C 15 ? ? 117.51 120.30 -2.79 0.40 N 27 1 N1 A G 16 ? ? C2 A G 16 ? ? N3 A G 16 ? ? 128.53 123.90 4.63 0.60 N 28 1 N3 A G 16 ? ? C2 A G 16 ? ? N2 A G 16 ? ? 113.65 119.90 -6.25 0.70 N 29 1 "C3'" A G 19 ? ? "C2'" A G 19 ? ? "C1'" A G 19 ? ? 96.29 101.30 -5.01 0.70 N 30 1 N1 A G 19 ? ? C2 A G 19 ? ? N3 A G 19 ? ? 128.04 123.90 4.14 0.60 N 31 1 N3 A G 19 ? ? C2 A G 19 ? ? N2 A G 19 ? ? 113.03 119.90 -6.87 0.70 N 32 1 N3 A C 20 ? ? C4 A C 20 ? ? N4 A C 20 ? ? 111.15 118.00 -6.85 0.70 N 33 1 C5 A C 20 ? ? C4 A C 20 ? ? N4 A C 20 ? ? 124.65 120.20 4.45 0.70 N 34 1 C6 A C 21 ? ? N1 A C 21 ? ? C2 A C 21 ? ? 117.53 120.30 -2.77 0.40 N 35 1 N1 B G 1 ? ? C2 B G 1 ? ? N3 B G 1 ? ? 128.54 123.90 4.64 0.60 N 36 1 N3 B G 1 ? ? C2 B G 1 ? ? N2 B G 1 ? ? 113.29 119.90 -6.61 0.70 N 37 1 N1 B G 1 ? ? C6 B G 1 ? ? O6 B G 1 ? ? 116.28 119.90 -3.62 0.60 N 38 1 C5 B G 1 ? ? C6 B G 1 ? ? O6 B G 1 ? ? 132.33 128.60 3.73 0.60 N 39 1 "O4'" B C 2 ? ? "C1'" B C 2 ? ? N1 B C 2 ? ? 113.47 108.50 4.97 0.70 N 40 1 N3 B C 2 ? ? C2 B C 2 ? ? O2 B C 2 ? ? 117.45 121.90 -4.45 0.70 N 41 1 N1 B A 3 ? ? C6 B A 3 ? ? N6 B A 3 ? ? 113.80 118.60 -4.80 0.60 N 42 1 N3 B C 5 ? ? C4 B C 5 ? ? C5 B C 5 ? ? 124.33 121.90 2.43 0.40 N 43 1 N1 B G 6 ? ? C2 B G 6 ? ? N3 B G 6 ? ? 128.18 123.90 4.28 0.60 N 44 1 N3 B G 6 ? ? C2 B G 6 ? ? N2 B G 6 ? ? 113.69 119.90 -6.21 0.70 N 45 1 N1 B A 8 ? ? C6 B A 8 ? ? N6 B A 8 ? ? 109.02 118.60 -9.58 0.60 N 46 1 C5 B A 8 ? ? C6 B A 8 ? ? N6 B A 8 ? ? 131.20 123.70 7.50 0.80 N 47 1 C6 B C 9 ? ? N1 B C 9 ? ? C2 B C 9 ? ? 117.55 120.30 -2.75 0.40 N 48 1 N3 B C 10 ? ? C4 B C 10 ? ? C5 B C 10 ? ? 125.62 121.90 3.72 0.40 N 49 1 N1 B A 11 ? ? C6 B A 11 ? ? N6 B A 11 ? ? 114.39 118.60 -4.21 0.60 N 50 1 "O4'" B C 14 ? ? "C1'" B C 14 ? ? N1 B C 14 ? ? 113.68 108.50 5.18 0.70 N 51 1 "O4'" B G 15 ? ? "C1'" B G 15 ? ? N9 B G 15 ? ? 113.47 108.50 4.97 0.70 N 52 1 N1 B G 15 ? ? C2 B G 15 ? ? N3 B G 15 ? ? 127.74 123.90 3.84 0.60 N 53 1 N3 B G 15 ? ? C2 B G 15 ? ? N2 B G 15 ? ? 113.94 119.90 -5.96 0.70 N 54 1 N1 B G 15 ? ? C6 B G 15 ? ? O6 B G 15 ? ? 115.70 119.90 -4.20 0.60 N 55 1 C5 B G 15 ? ? C6 B G 15 ? ? O6 B G 15 ? ? 132.22 128.60 3.62 0.60 N 56 1 "C3'" B G 16 ? ? "C2'" B G 16 ? ? "C1'" B G 16 ? ? 97.05 101.30 -4.25 0.70 N 57 1 N1 B G 16 ? ? C2 B G 16 ? ? N3 B G 16 ? ? 128.33 123.90 4.43 0.60 N 58 1 N3 B G 16 ? ? C2 B G 16 ? ? N2 B G 16 ? ? 113.51 119.90 -6.39 0.70 N 59 1 N1 B G 16 ? ? C6 B G 16 ? ? O6 B G 16 ? ? 116.21 119.90 -3.69 0.60 N 60 1 C5 B G 16 ? ? C6 B G 16 ? ? O6 B G 16 ? ? 132.75 128.60 4.15 0.60 N 61 1 N1 B G 18 ? ? C2 B G 18 ? ? N3 B G 18 ? ? 129.67 123.90 5.77 0.60 N 62 1 N9 B G 18 ? ? C4 B G 18 ? ? C5 B G 18 ? ? 107.82 105.40 2.42 0.40 N 63 1 N3 B G 18 ? ? C2 B G 18 ? ? N2 B G 18 ? ? 112.45 119.90 -7.45 0.70 N 64 1 N1 B G 18 ? ? C6 B G 18 ? ? O6 B G 18 ? ? 115.39 119.90 -4.51 0.60 N 65 1 C5 B G 18 ? ? C6 B G 18 ? ? O6 B G 18 ? ? 133.55 128.60 4.95 0.60 N 66 1 "O4'" B C 19 ? ? "C1'" B C 19 ? ? N1 B C 19 ? ? 114.96 108.50 6.46 0.70 N # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2BJ2 'double helix' 2BJ2 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 21 1_555 -0.037 -0.225 -0.767 -6.287 0.634 -1.370 1 A_G1:C21_A A 1 ? A 21 ? 19 1 1 A G 2 1_555 A C 20 1_555 -0.760 -0.247 -0.058 -0.561 -1.984 1.060 2 A_G2:C20_A A 2 ? A 20 ? 19 1 1 A C 3 1_555 A G 19 1_555 0.666 -0.264 0.294 -8.872 -0.352 -0.631 3 A_C3:G19_A A 3 ? A 19 ? 19 1 1 A A 4 1_555 A U 18 1_555 -0.131 -0.127 0.654 21.513 -3.786 3.028 4 A_A4:U18_A A 4 ? A 18 ? 20 1 1 A A 5 1_555 A U 17 1_555 -0.115 -0.173 -0.269 14.676 -13.274 2.581 5 A_A5:U17_A A 5 ? A 17 ? 20 1 1 A C 6 1_555 A G 16 1_555 0.701 -0.384 -0.197 -3.364 -9.720 -0.833 6 A_C6:G16_A A 6 ? A 16 ? 19 1 1 A G 7 1_555 A C 15 1_555 -0.485 -0.268 0.025 -8.424 -5.519 -1.883 7 A_G7:C15_A A 7 ? A 15 ? 19 1 1 B A 7 1_555 A U 14 1_555 -0.078 -0.118 0.249 11.407 -7.791 -2.925 8 B_A7:U14_A B 7 ? A 14 ? 20 1 1 B A 8 1_555 A U 13 1_555 -0.018 0.023 0.371 26.016 2.217 5.219 9 B_A8:U13_A B 8 ? A 13 ? 20 1 1 B C 9 1_555 A G 12 1_555 1.024 -0.349 -0.645 15.065 -21.534 4.966 10 B_C9:G12_A B 9 ? A 12 ? 19 1 1 B C 10 1_555 A G 11 1_555 0.515 -0.199 -0.085 -5.092 -2.714 -0.949 11 B_C10:G11_A B 10 ? A 11 ? 19 1 1 B A 11 1_555 A U 10 1_555 -0.028 -0.138 -0.105 -2.701 -12.103 1.593 12 B_A11:U10_A B 11 ? A 10 ? 20 1 1 B U 12 1_555 A A 9 1_555 0.018 -0.185 -0.181 -12.783 -10.613 -0.534 13 B_U12:A9_A B 12 ? A 9 ? 20 1 1 B C 13 1_555 A G 8 1_555 0.402 -0.221 0.122 -10.204 4.463 -1.131 14 B_C13:G8_A B 13 ? A 8 ? 19 1 1 B C 14 1_555 B G 6 1_555 -0.013 -0.156 0.142 -4.614 5.105 -3.148 15 B_C14:G6_B B 14 ? B 6 ? 19 1 1 B G 15 1_555 B C 5 1_555 -0.674 -0.323 0.206 8.213 -6.240 -1.959 16 B_G15:C5_B B 15 ? B 5 ? 19 1 1 B G 16 1_555 B C 4 1_555 -0.738 -0.308 -0.199 0.614 -14.271 2.794 17 B_G16:C4_B B 16 ? B 4 ? 19 1 1 B U 17 1_555 B A 3 1_555 0.154 -0.105 0.108 -16.845 -12.540 1.547 18 B_U17:A3_B B 17 ? B 3 ? 20 1 1 B G 18 1_555 B C 2 1_555 -0.363 -0.063 0.276 13.186 14.272 1.999 19 B_G18:C2_B B 18 ? B 2 ? 19 1 1 B C 19 1_555 B G 1 1_555 0.520 -0.121 0.199 -13.984 12.843 0.959 20 B_C19:G1_B B 19 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 21 1_555 A G 2 1_555 A C 20 1_555 -0.017 -2.037 3.410 -4.011 -1.379 28.323 -3.789 -0.925 3.472 -2.798 8.139 28.633 1 AA_G1G2:C20C21_AA A 1 ? A 21 ? A 2 ? A 20 ? 1 A G 2 1_555 A C 20 1_555 A C 3 1_555 A G 19 1_555 0.097 -2.420 3.373 0.912 12.256 30.135 -6.243 -0.030 2.245 22.435 -1.669 32.491 2 AA_G2C3:G19C20_AA A 2 ? A 20 ? A 3 ? A 19 ? 1 A C 3 1_555 A G 19 1_555 A A 4 1_555 A U 18 1_555 0.238 -1.591 2.286 -0.873 1.108 23.848 -4.091 -0.771 2.201 2.679 2.111 23.889 3 AA_C3A4:U18G19_AA A 3 ? A 19 ? A 4 ? A 18 ? 1 A A 4 1_555 A U 18 1_555 A A 5 1_555 A U 17 1_555 0.037 -2.037 3.503 5.045 2.903 28.183 -4.779 1.103 3.238 5.883 -10.222 28.766 4 AA_A4A5:U17U18_AA A 4 ? A 18 ? A 5 ? A 17 ? 1 A A 5 1_555 A U 17 1_555 A C 6 1_555 A G 16 1_555 -0.143 -2.077 3.670 -1.287 7.829 34.599 -4.620 0.036 3.143 12.953 2.129 35.470 5 AA_A5C6:G16U17_AA A 5 ? A 17 ? A 6 ? A 16 ? 1 A C 6 1_555 A G 16 1_555 A G 7 1_555 A C 15 1_555 -0.136 -2.080 3.870 2.467 -2.904 24.988 -3.724 1.185 4.049 -6.662 -5.659 25.272 6 AA_C6G7:C15G16_AA A 6 ? A 16 ? A 7 ? A 15 ? 1 A G 7 1_555 A C 15 1_555 B A 7 1_555 A U 14 1_555 -0.229 -1.748 3.231 0.588 -13.634 27.473 -0.307 0.563 3.665 -26.720 -1.153 30.617 7 AB_G7A7:U14C15_AA A 7 ? A 15 ? B 7 ? A 14 ? 1 B A 7 1_555 A U 14 1_555 B A 8 1_555 A U 13 1_555 -0.353 -2.387 2.685 -6.867 4.802 29.193 -5.309 -0.398 2.294 9.288 13.282 30.347 8 BB_A7A8:U13U14_AA B 7 ? A 14 ? B 8 ? A 13 ? 1 B A 8 1_555 A U 13 1_555 B C 9 1_555 A G 12 1_555 -0.471 -1.466 3.665 8.200 15.315 34.607 -4.147 1.746 2.637 23.967 -12.832 38.602 9 BB_A8C9:G12U13_AA B 8 ? A 13 ? B 9 ? A 12 ? 1 B C 9 1_555 A G 12 1_555 B C 10 1_555 A G 11 1_555 -0.467 -1.841 3.632 -0.919 24.913 32.431 -5.241 0.576 1.830 38.339 1.414 40.701 10 BB_C9C10:G11G12_AA B 9 ? A 12 ? B 10 ? A 11 ? 1 B C 10 1_555 A G 11 1_555 B A 11 1_555 A U 10 1_555 0.519 -0.582 3.128 1.307 22.653 26.936 -4.047 -0.683 2.067 40.676 -2.346 35.084 11 BB_C10A11:U10G11_AA B 10 ? A 11 ? B 11 ? A 10 ? 1 B A 11 1_555 A U 10 1_555 B U 12 1_555 A A 9 1_555 1.047 -1.346 3.335 3.150 14.208 39.338 -3.322 -1.147 2.780 20.282 -4.496 41.844 12 BB_A11U12:A9U10_AA B 11 ? A 10 ? B 12 ? A 9 ? 1 B U 12 1_555 A A 9 1_555 B C 13 1_555 A G 8 1_555 -0.190 -2.022 3.152 -2.973 4.438 29.774 -4.704 -0.191 2.833 8.550 5.728 30.239 13 BB_U12C13:G8A9_AA B 12 ? A 9 ? B 13 ? A 8 ? 1 B C 13 1_555 A G 8 1_555 B C 14 1_555 B G 6 1_555 -0.381 -2.617 3.104 -3.385 3.508 27.170 -6.260 0.052 2.777 7.392 7.133 27.596 14 BB_C13C14:G6G8_BA B 13 ? A 8 ? B 14 ? B 6 ? 1 B C 14 1_555 B G 6 1_555 B G 15 1_555 B C 5 1_555 0.518 -1.752 3.346 -0.257 -5.604 21.662 -2.244 -1.440 3.669 -14.597 0.671 22.368 15 BB_C14G15:C5G6_BB B 14 ? B 6 ? B 15 ? B 5 ? 1 B G 15 1_555 B C 5 1_555 B G 16 1_555 B C 4 1_555 0.238 -2.545 3.388 0.411 9.306 28.379 -6.716 -0.384 2.451 18.367 -0.810 29.838 16 BB_G15G16:C4C5_BB B 15 ? B 5 ? B 16 ? B 4 ? 1 B G 16 1_555 B C 4 1_555 B U 17 1_555 B A 3 1_555 -0.220 -1.910 3.647 -0.236 9.306 34.214 -4.564 0.326 3.041 15.467 0.393 35.421 17 BB_G16U17:A3C4_BB B 16 ? B 4 ? B 17 ? B 3 ? 1 B U 17 1_555 B A 3 1_555 B G 18 1_555 B C 2 1_555 -0.206 -0.841 2.717 -4.010 0.471 27.666 -1.834 -0.367 2.705 0.978 8.329 27.954 18 BB_U17G18:C2A3_BB B 17 ? B 3 ? B 18 ? B 2 ? 1 B G 18 1_555 B C 2 1_555 B C 19 1_555 B G 1 1_555 0.183 -2.430 4.178 0.156 34.225 21.807 -6.989 -0.250 0.256 58.434 -0.266 40.406 19 BB_G18C19:G1C2_BB B 18 ? B 2 ? B 19 ? B 1 ? #