data_2BJM # _entry.id 2BJM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2BJM PDBE EBI-22830 WWPDB D_1290022830 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BJM _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-02-04 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'James, L.C.' 1 'Tawfik, D.S.' 2 # _citation.id primary _citation.title ;Structure and Kinetics of a Transient Antibody Binding Intermediate Reveal a Kinetic Discrimination Mechanism in Antigen Recognition ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 102 _citation.page_first 12730 _citation.page_last ? _citation.year 2005 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16129832 _citation.pdbx_database_id_DOI 10.1073/PNAS.0500909102 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'James, L.C.' 1 primary 'Tawfik, D.S.' 2 # _cell.entry_id 2BJM _cell.length_a 79.672 _cell.length_b 79.672 _cell.length_c 67.958 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BJM _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'IGE SPE7 HEAVY CHAIN' 13545.160 1 ? ? 'HEAVY CHAIN, RESIDUES 1-120' 'ANTHRONE ATTACHED' 2 polymer man 'IGE SPE7 LIGHT CHAIN' 11558.817 1 ? ? 'LIGHT CHAIN, RESIDUES 1-110' ? 3 non-polymer syn ANTHRONE 194.229 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAY MQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSS ; ;EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAY MQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSS ; H ? 2 'polypeptide(L)' no no ;QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGA QTEDEAIYFCALWYSNHLVFGGGTKLTVLE ; ;QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGA QTEDEAIYFCALWYSNHLVFGGGTKLTVLE ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLN n 1 7 SER n 1 8 GLY n 1 9 ALA n 1 10 GLU n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 GLY n 1 16 ALA n 1 17 SER n 1 18 VAL n 1 19 LYS n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 LYS n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 TYR n 1 28 THR n 1 29 PHE n 1 30 THR n 1 31 SER n 1 32 TYR n 1 33 TRP n 1 34 MET n 1 35 HIS n 1 36 TRP n 1 37 VAL n 1 38 LYS n 1 39 GLN n 1 40 ARG n 1 41 PRO n 1 42 GLY n 1 43 ARG n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 ILE n 1 49 GLY n 1 50 ARG n 1 51 ILE n 1 52 ASP n 1 53 PRO n 1 54 ASN n 1 55 GLY n 1 56 GLY n 1 57 GLY n 1 58 THR n 1 59 LYS n 1 60 TYR n 1 61 ASN n 1 62 GLU n 1 63 LYS n 1 64 PHE n 1 65 LYS n 1 66 SER n 1 67 LYS n 1 68 ALA n 1 69 THR n 1 70 LEU n 1 71 THR n 1 72 VAL n 1 73 ASP n 1 74 LYS n 1 75 PRO n 1 76 SER n 1 77 SER n 1 78 THR n 1 79 ALA n 1 80 TYR n 1 81 MET n 1 82 GLN n 1 83 LEU n 1 84 SER n 1 85 SER n 1 86 LEU n 1 87 THR n 1 88 SER n 1 89 GLU n 1 90 ASP n 1 91 SER n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 TYR n 1 96 CYS n 1 97 ALA n 1 98 ARG n 1 99 MET n 1 100 TRP n 1 101 TYR n 1 102 TYR n 1 103 GLY n 1 104 THR n 1 105 TYR n 1 106 TYR n 1 107 PHE n 1 108 ASP n 1 109 TYR n 1 110 TRP n 1 111 GLY n 1 112 GLN n 1 113 GLY n 1 114 THR n 1 115 THR n 1 116 LEU n 1 117 THR n 1 118 VAL n 1 119 SER n 1 120 SER n 2 1 GLN n 2 2 ALA n 2 3 VAL n 2 4 VAL n 2 5 THR n 2 6 GLN n 2 7 GLU n 2 8 SER n 2 9 ALA n 2 10 LEU n 2 11 THR n 2 12 THR n 2 13 SER n 2 14 PRO n 2 15 GLY n 2 16 GLU n 2 17 THR n 2 18 VAL n 2 19 THR n 2 20 LEU n 2 21 THR n 2 22 CYS n 2 23 ARG n 2 24 SER n 2 25 SER n 2 26 THR n 2 27 GLY n 2 28 ALA n 2 29 VAL n 2 30 THR n 2 31 THR n 2 32 SER n 2 33 ASN n 2 34 TYR n 2 35 ALA n 2 36 ASN n 2 37 TRP n 2 38 VAL n 2 39 GLN n 2 40 GLU n 2 41 LYS n 2 42 PRO n 2 43 ASP n 2 44 HIS n 2 45 LEU n 2 46 PHE n 2 47 THR n 2 48 GLY n 2 49 LEU n 2 50 ILE n 2 51 GLY n 2 52 GLY n 2 53 THR n 2 54 ASN n 2 55 ASN n 2 56 ARG n 2 57 ALA n 2 58 PRO n 2 59 GLY n 2 60 VAL n 2 61 PRO n 2 62 ALA n 2 63 ARG n 2 64 PHE n 2 65 SER n 2 66 GLY n 2 67 SER n 2 68 LEU n 2 69 ILE n 2 70 GLY n 2 71 ASN n 2 72 LYS n 2 73 ALA n 2 74 ALA n 2 75 LEU n 2 76 THR n 2 77 ILE n 2 78 THR n 2 79 GLY n 2 80 ALA n 2 81 GLN n 2 82 THR n 2 83 GLU n 2 84 ASP n 2 85 GLU n 2 86 ALA n 2 87 ILE n 2 88 TYR n 2 89 PHE n 2 90 CYS n 2 91 ALA n 2 92 LEU n 2 93 TRP n 2 94 TYR n 2 95 SER n 2 96 ASN n 2 97 HIS n 2 98 LEU n 2 99 VAL n 2 100 PHE n 2 101 GLY n 2 102 GLY n 2 103 GLY n 2 104 THR n 2 105 LYS n 2 106 LEU n 2 107 THR n 2 108 VAL n 2 109 LEU n 2 110 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'HOUSE MOUSE' ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'HOUSE MOUSE' ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2BJM 2 ? ? 2BJM ? 2 PDB 2BJM 1 ? ? 2BJM ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2BJM L 1 ? 110 ? 2BJM 1 ? 110 ? 1 110 2 2 2BJM H 1 ? 120 ? 2BJM 1 ? 120 ? 1 120 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANF non-polymer . ANTHRONE ? 'C14 H10 O' 194.229 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2BJM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 46 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2BJM _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 56.000 _reflns.d_resolution_high 2.100 _reflns.number_obs 11647 _reflns.number_all ? _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.06000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.4000 _reflns.B_iso_Wilson_estimate 17.30 _reflns.pdbx_redundancy 3.000 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.25 _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_obs 0.21000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.400 _reflns_shell.pdbx_redundancy 2.50 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2BJM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6123 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 56.34 _refine.ls_d_res_high 2.15 _refine.ls_percent_reflns_obs 52.5 _refine.ls_R_factor_obs 0.269 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.268 _refine.ls_R_factor_R_free 0.286 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.770 _refine.ls_number_reflns_R_free 287 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.867 _refine.correlation_coeff_Fo_to_Fc_free 0.813 _refine.B_iso_mean 31.74 _refine.aniso_B[1][1] 0.08000 _refine.aniso_B[2][2] 0.08000 _refine.aniso_B[3][3] -0.16100 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL PLUS MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.200 _refine.pdbx_overall_ESU_R_Free 0.429 _refine.overall_SU_ML 0.206 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.242 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1767 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1782 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 56.34 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.022 ? 1830 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 3120 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.947 1.944 ? 2492 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.145 3.000 ? 7281 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.292 5.000 ? 228 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.279 23.836 ? 73 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.888 15.000 ? 281 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.534 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.135 0.200 ? 272 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1383 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.008 0.020 ? 581 'X-RAY DIFFRACTION' ? r_nbd_refined 0.305 0.200 ? 858 'X-RAY DIFFRACTION' ? r_nbd_other 0.241 0.300 ? 3043 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.314 0.200 ? 1135 'X-RAY DIFFRACTION' ? r_nbtor_other 0.447 0.500 ? 17 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.172 0.200 ? 68 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.448 0.200 ? 96 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.311 0.300 ? 81 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.287 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.866 1.500 ? 1176 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.594 2.000 ? 1818 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.729 3.000 ? 774 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.711 4.500 ? 674 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 9.48 _refine_ls_shell.d_res_low 56.34 _refine_ls_shell.number_reflns_R_work 74 _refine_ls_shell.R_factor_R_work 0.3010 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.7870 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 5 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2BJM _struct.title 'SPE7:Anthrone Complex' _struct.pdbx_descriptor 'IGE SPE7 HEAVY CHAIN, IGE SPE7 LIGHT CHAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BJM _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'IMMUNE SYSTEM, ENCOUNTER COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 87 ? SER A 91 ? THR H 87 SER H 91 5 ? 5 HELX_P HELX_P2 2 GLN B 81 ? GLU B 85 ? GLN L 81 GLU L 85 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.026 ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 90 SG ? ? L CYS 22 L CYS 90 1_555 ? ? ? ? ? ? ? 2.030 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 1 A . ? GLU 1 H VAL 2 A ? VAL 2 H 1 6.92 2 VAL 118 A . ? VAL 118 H SER 119 A ? SER 119 H 1 -14.51 3 LEU 109 B . ? LEU 109 L GLU 110 B ? GLU 110 L 1 -11.09 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details HA ? 4 ? HB ? 5 ? LA ? 4 ? LB ? 6 ? LC ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense HA 1 2 ? anti-parallel HA 2 3 ? anti-parallel HA 3 4 ? anti-parallel HB 1 2 ? parallel HB 2 3 ? anti-parallel HB 3 4 ? anti-parallel HB 4 5 ? anti-parallel LA 1 2 ? anti-parallel LA 2 3 ? anti-parallel LA 3 4 ? anti-parallel LB 1 2 ? parallel LB 2 3 ? anti-parallel LB 3 4 ? anti-parallel LB 4 5 ? anti-parallel LB 5 6 ? anti-parallel LC 1 2 ? parallel LC 2 3 ? anti-parallel LC 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id HA 1 GLN A 3 ? GLN A 6 ? GLN H 3 GLN H 6 HA 2 VAL A 18 ? SER A 25 ? VAL H 18 SER H 25 HA 3 THR A 78 ? LEU A 83 ? THR H 78 LEU H 83 HA 4 ALA A 68 ? ASP A 73 ? ALA H 68 ASP H 73 HB 1 ALA A 9 ? VAL A 12 ? ALA H 9 VAL H 12 HB 2 THR A 114 ? VAL A 118 ? THR H 114 VAL H 118 HB 3 ALA A 92 ? ALA A 97 ? ALA H 92 ALA H 97 HB 4 HIS A 35 ? ARG A 40 ? HIS H 35 ARG H 40 HB 5 GLY A 44 ? TRP A 47 ? GLY H 44 TRP H 47 LA 1 VAL B 4 ? THR B 5 ? VAL L 4 THR L 5 LA 2 VAL B 18 ? SER B 24 ? VAL L 18 SER L 24 LA 3 LYS B 72 ? ILE B 77 ? LYS L 72 ILE L 77 LA 4 PHE B 64 ? ILE B 69 ? PHE L 64 ILE L 69 LB 1 ALA B 9 ? THR B 12 ? ALA L 9 THR L 12 LB 2 THR B 104 ? VAL B 108 ? THR L 104 VAL L 108 LB 3 ILE B 87 ? TRP B 93 ? ILE L 87 TRP L 93 LB 4 ASN B 36 ? LYS B 41 ? ASN L 36 LYS L 41 LB 5 LEU B 45 ? GLY B 51 ? LEU L 45 GLY L 51 LB 6 ASN B 55 ? ARG B 56 ? ASN L 55 ARG L 56 LC 1 ALA B 9 ? THR B 12 ? ALA L 9 THR L 12 LC 2 THR B 104 ? VAL B 108 ? THR L 104 VAL L 108 LC 3 ILE B 87 ? TRP B 93 ? ILE L 87 TRP L 93 LC 4 LEU B 98 ? PHE B 100 ? LEU L 98 PHE L 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id HA 1 2 N GLN A 5 ? N GLN H 5 O LYS A 23 ? O LYS H 23 HA 2 3 N CYS A 22 ? N CYS H 22 O ALA A 79 ? O ALA H 79 HA 3 4 N GLN A 82 ? N GLN H 82 O THR A 69 ? O THR H 69 HB 1 2 N GLU A 10 ? N GLU H 10 O THR A 115 ? O THR H 115 HB 2 3 N LEU A 116 ? N LEU H 116 O ALA A 92 ? O ALA H 92 HB 3 4 N ALA A 97 ? N ALA H 97 O HIS A 35 ? O HIS H 35 HB 4 5 N ARG A 40 ? N ARG H 40 O GLY A 44 ? O GLY H 44 LA 1 2 N THR B 5 ? N THR L 5 O ARG B 23 ? O ARG L 23 LA 2 3 N CYS B 22 ? N CYS L 22 O ALA B 73 ? O ALA L 73 LA 3 4 N THR B 76 ? N THR L 76 O SER B 65 ? O SER L 65 LB 1 2 N LEU B 10 ? N LEU L 10 O LYS B 105 ? O LYS L 105 LB 2 3 N THR B 104 ? N THR L 104 O TYR B 88 ? O TYR L 88 LB 3 4 N ALA B 91 ? N ALA L 91 O ASN B 36 ? O ASN L 36 LB 4 5 N LYS B 41 ? N LYS L 41 O LEU B 45 ? O LEU L 45 LB 5 6 N GLY B 51 ? N GLY L 51 O ASN B 55 ? O ASN L 55 LC 1 2 N LEU B 10 ? N LEU L 10 O LYS B 105 ? O LYS L 105 LC 2 3 N THR B 104 ? N THR L 104 O TYR B 88 ? O TYR L 88 LC 3 4 N LEU B 92 ? N LEU L 92 O VAL B 99 ? O VAL L 99 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE ANF H 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TRP A 33 ? TRP H 33 . ? 1_555 ? 2 AC1 5 TYR A 101 ? TYR H 101 . ? 1_555 ? 3 AC1 5 TYR B 34 ? TYR L 34 . ? 1_555 ? 4 AC1 5 ASN B 36 ? ASN L 36 . ? 1_555 ? 5 AC1 5 TRP B 93 ? TRP L 93 . ? 1_555 ? # _database_PDB_matrix.entry_id 2BJM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2BJM _atom_sites.fract_transf_matrix[1][1] 0.012551 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012551 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014715 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU H . n A 1 2 VAL 2 2 2 VAL VAL H . n A 1 3 GLN 3 3 3 GLN GLN H . n A 1 4 LEU 4 4 4 LEU LEU H . n A 1 5 GLN 5 5 5 GLN GLN H . n A 1 6 GLN 6 6 6 GLN GLN H . n A 1 7 SER 7 7 7 SER SER H . n A 1 8 GLY 8 8 8 GLY GLY H . n A 1 9 ALA 9 9 9 ALA ALA H . n A 1 10 GLU 10 10 10 GLU GLU H . n A 1 11 LEU 11 11 11 LEU LEU H . n A 1 12 VAL 12 12 12 VAL VAL H . n A 1 13 LYS 13 13 13 LYS LYS H . n A 1 14 PRO 14 14 14 PRO PRO H . n A 1 15 GLY 15 15 15 GLY GLY H . n A 1 16 ALA 16 16 16 ALA ALA H . n A 1 17 SER 17 17 17 SER SER H . n A 1 18 VAL 18 18 18 VAL VAL H . n A 1 19 LYS 19 19 19 LYS LYS H . n A 1 20 LEU 20 20 20 LEU LEU H . n A 1 21 SER 21 21 21 SER SER H . n A 1 22 CYS 22 22 22 CYS CYS H . n A 1 23 LYS 23 23 23 LYS LYS H . n A 1 24 ALA 24 24 24 ALA ALA H . n A 1 25 SER 25 25 25 SER SER H . n A 1 26 GLY 26 26 26 GLY GLY H . n A 1 27 TYR 27 27 27 TYR TYR H . n A 1 28 THR 28 28 28 THR THR H . n A 1 29 PHE 29 29 29 PHE PHE H . n A 1 30 THR 30 30 30 THR THR H . n A 1 31 SER 31 31 31 SER SER H . n A 1 32 TYR 32 32 32 TYR TYR H . n A 1 33 TRP 33 33 33 TRP TRP H . n A 1 34 MET 34 34 34 MET MET H . n A 1 35 HIS 35 35 35 HIS HIS H . n A 1 36 TRP 36 36 36 TRP TRP H . n A 1 37 VAL 37 37 37 VAL VAL H . n A 1 38 LYS 38 38 38 LYS LYS H . n A 1 39 GLN 39 39 39 GLN GLN H . n A 1 40 ARG 40 40 40 ARG ARG H . n A 1 41 PRO 41 41 41 PRO PRO H . n A 1 42 GLY 42 42 42 GLY GLY H . n A 1 43 ARG 43 43 43 ARG ARG H . n A 1 44 GLY 44 44 44 GLY GLY H . n A 1 45 LEU 45 45 45 LEU LEU H . n A 1 46 GLU 46 46 46 GLU GLU H . n A 1 47 TRP 47 47 47 TRP TRP H . n A 1 48 ILE 48 48 48 ILE ILE H . n A 1 49 GLY 49 49 49 GLY GLY H . n A 1 50 ARG 50 50 50 ARG ARG H . n A 1 51 ILE 51 51 51 ILE ILE H . n A 1 52 ASP 52 52 52 ASP ASP H . n A 1 53 PRO 53 53 53 PRO PRO H . n A 1 54 ASN 54 54 54 ASN ASN H . n A 1 55 GLY 55 55 55 GLY GLY H . n A 1 56 GLY 56 56 56 GLY GLY H . n A 1 57 GLY 57 57 57 GLY GLY H . n A 1 58 THR 58 58 58 THR THR H . n A 1 59 LYS 59 59 59 LYS LYS H . n A 1 60 TYR 60 60 60 TYR TYR H . n A 1 61 ASN 61 61 61 ASN ASN H . n A 1 62 GLU 62 62 62 GLU GLU H . n A 1 63 LYS 63 63 63 LYS LYS H . n A 1 64 PHE 64 64 64 PHE PHE H . n A 1 65 LYS 65 65 65 LYS LYS H . n A 1 66 SER 66 66 66 SER SER H . n A 1 67 LYS 67 67 67 LYS LYS H . n A 1 68 ALA 68 68 68 ALA ALA H . n A 1 69 THR 69 69 69 THR THR H . n A 1 70 LEU 70 70 70 LEU LEU H . n A 1 71 THR 71 71 71 THR THR H . n A 1 72 VAL 72 72 72 VAL VAL H . n A 1 73 ASP 73 73 73 ASP ASP H . n A 1 74 LYS 74 74 74 LYS LYS H . n A 1 75 PRO 75 75 75 PRO PRO H . n A 1 76 SER 76 76 76 SER SER H . n A 1 77 SER 77 77 77 SER SER H . n A 1 78 THR 78 78 78 THR THR H . n A 1 79 ALA 79 79 79 ALA ALA H . n A 1 80 TYR 80 80 80 TYR TYR H . n A 1 81 MET 81 81 81 MET MET H . n A 1 82 GLN 82 82 82 GLN GLN H . n A 1 83 LEU 83 83 83 LEU LEU H . n A 1 84 SER 84 84 84 SER SER H . n A 1 85 SER 85 85 85 SER SER H . n A 1 86 LEU 86 86 86 LEU LEU H . n A 1 87 THR 87 87 87 THR THR H . n A 1 88 SER 88 88 88 SER SER H . n A 1 89 GLU 89 89 89 GLU GLU H . n A 1 90 ASP 90 90 90 ASP ASP H . n A 1 91 SER 91 91 91 SER SER H . n A 1 92 ALA 92 92 92 ALA ALA H . n A 1 93 VAL 93 93 93 VAL VAL H . n A 1 94 TYR 94 94 94 TYR TYR H . n A 1 95 TYR 95 95 95 TYR TYR H . n A 1 96 CYS 96 96 96 CYS CYS H . n A 1 97 ALA 97 97 97 ALA ALA H . n A 1 98 ARG 98 98 98 ARG ARG H . n A 1 99 MET 99 99 99 MET MET H . n A 1 100 TRP 100 100 100 TRP TRP H . n A 1 101 TYR 101 101 101 TYR TYR H . n A 1 102 TYR 102 102 102 TYR TYR H . n A 1 103 GLY 103 103 103 GLY GLY H . n A 1 104 THR 104 104 104 THR THR H . n A 1 105 TYR 105 105 105 TYR TYR H . n A 1 106 TYR 106 106 106 TYR TYR H . n A 1 107 PHE 107 107 107 PHE PHE H . n A 1 108 ASP 108 108 108 ASP ASP H . n A 1 109 TYR 109 109 109 TYR TYR H . n A 1 110 TRP 110 110 110 TRP TRP H . n A 1 111 GLY 111 111 111 GLY GLY H . n A 1 112 GLN 112 112 112 GLN GLN H . n A 1 113 GLY 113 113 113 GLY GLY H . n A 1 114 THR 114 114 114 THR THR H . n A 1 115 THR 115 115 115 THR THR H . n A 1 116 LEU 116 116 116 LEU LEU H . n A 1 117 THR 117 117 117 THR THR H . n A 1 118 VAL 118 118 118 VAL VAL H . n A 1 119 SER 119 119 119 SER SER H . n A 1 120 SER 120 120 120 SER SER H . n B 2 1 GLN 1 1 1 GLN GLN L . n B 2 2 ALA 2 2 2 ALA ALA L . n B 2 3 VAL 3 3 3 VAL VAL L . n B 2 4 VAL 4 4 4 VAL VAL L . n B 2 5 THR 5 5 5 THR THR L . n B 2 6 GLN 6 6 6 GLN GLN L . n B 2 7 GLU 7 7 7 GLU GLU L . n B 2 8 SER 8 8 8 SER SER L . n B 2 9 ALA 9 9 9 ALA ALA L . n B 2 10 LEU 10 10 10 LEU LEU L . n B 2 11 THR 11 11 11 THR THR L . n B 2 12 THR 12 12 12 THR THR L . n B 2 13 SER 13 13 13 SER SER L . n B 2 14 PRO 14 14 14 PRO PRO L . n B 2 15 GLY 15 15 15 GLY GLY L . n B 2 16 GLU 16 16 16 GLU GLU L . n B 2 17 THR 17 17 17 THR THR L . n B 2 18 VAL 18 18 18 VAL VAL L . n B 2 19 THR 19 19 19 THR THR L . n B 2 20 LEU 20 20 20 LEU LEU L . n B 2 21 THR 21 21 21 THR THR L . n B 2 22 CYS 22 22 22 CYS CYS L . n B 2 23 ARG 23 23 23 ARG ARG L . n B 2 24 SER 24 24 24 SER SER L . n B 2 25 SER 25 25 25 SER SER L . n B 2 26 THR 26 26 26 THR THR L . n B 2 27 GLY 27 27 27 GLY GLY L . n B 2 28 ALA 28 28 28 ALA ALA L . n B 2 29 VAL 29 29 29 VAL VAL L . n B 2 30 THR 30 30 30 THR THR L . n B 2 31 THR 31 31 31 THR THR L . n B 2 32 SER 32 32 32 SER SER L . n B 2 33 ASN 33 33 33 ASN ASN L . n B 2 34 TYR 34 34 34 TYR TYR L . n B 2 35 ALA 35 35 35 ALA ALA L . n B 2 36 ASN 36 36 36 ASN ASN L . n B 2 37 TRP 37 37 37 TRP TRP L . n B 2 38 VAL 38 38 38 VAL VAL L . n B 2 39 GLN 39 39 39 GLN GLN L . n B 2 40 GLU 40 40 40 GLU GLU L . n B 2 41 LYS 41 41 41 LYS LYS L . n B 2 42 PRO 42 42 42 PRO PRO L . n B 2 43 ASP 43 43 43 ASP ASP L . n B 2 44 HIS 44 44 44 HIS HIS L . n B 2 45 LEU 45 45 45 LEU LEU L . n B 2 46 PHE 46 46 46 PHE PHE L . n B 2 47 THR 47 47 47 THR THR L . n B 2 48 GLY 48 48 48 GLY GLY L . n B 2 49 LEU 49 49 49 LEU LEU L . n B 2 50 ILE 50 50 50 ILE ILE L . n B 2 51 GLY 51 51 51 GLY GLY L . n B 2 52 GLY 52 52 52 GLY GLY L . n B 2 53 THR 53 53 53 THR THR L . n B 2 54 ASN 54 54 54 ASN ASN L . n B 2 55 ASN 55 55 55 ASN ASN L . n B 2 56 ARG 56 56 56 ARG ARG L . n B 2 57 ALA 57 57 57 ALA ALA L . n B 2 58 PRO 58 58 58 PRO PRO L . n B 2 59 GLY 59 59 59 GLY GLY L . n B 2 60 VAL 60 60 60 VAL VAL L . n B 2 61 PRO 61 61 61 PRO PRO L . n B 2 62 ALA 62 62 62 ALA ALA L . n B 2 63 ARG 63 63 63 ARG ARG L . n B 2 64 PHE 64 64 64 PHE PHE L . n B 2 65 SER 65 65 65 SER SER L . n B 2 66 GLY 66 66 66 GLY GLY L . n B 2 67 SER 67 67 67 SER SER L . n B 2 68 LEU 68 68 68 LEU LEU L . n B 2 69 ILE 69 69 69 ILE ILE L . n B 2 70 GLY 70 70 70 GLY GLY L . n B 2 71 ASN 71 71 71 ASN ASN L . n B 2 72 LYS 72 72 72 LYS LYS L . n B 2 73 ALA 73 73 73 ALA ALA L . n B 2 74 ALA 74 74 74 ALA ALA L . n B 2 75 LEU 75 75 75 LEU LEU L . n B 2 76 THR 76 76 76 THR THR L . n B 2 77 ILE 77 77 77 ILE ILE L . n B 2 78 THR 78 78 78 THR THR L . n B 2 79 GLY 79 79 79 GLY GLY L . n B 2 80 ALA 80 80 80 ALA ALA L . n B 2 81 GLN 81 81 81 GLN GLN L . n B 2 82 THR 82 82 82 THR THR L . n B 2 83 GLU 83 83 83 GLU GLU L . n B 2 84 ASP 84 84 84 ASP ASP L . n B 2 85 GLU 85 85 85 GLU GLU L . n B 2 86 ALA 86 86 86 ALA ALA L . n B 2 87 ILE 87 87 87 ILE ILE L . n B 2 88 TYR 88 88 88 TYR TYR L . n B 2 89 PHE 89 89 89 PHE PHE L . n B 2 90 CYS 90 90 90 CYS CYS L . n B 2 91 ALA 91 91 91 ALA ALA L . n B 2 92 LEU 92 92 92 LEU LEU L . n B 2 93 TRP 93 93 93 TRP TRP L . n B 2 94 TYR 94 94 94 TYR TYR L . n B 2 95 SER 95 95 95 SER SER L . n B 2 96 ASN 96 96 96 ASN ASN L . n B 2 97 HIS 97 97 97 HIS HIS L . n B 2 98 LEU 98 98 98 LEU LEU L . n B 2 99 VAL 99 99 99 VAL VAL L . n B 2 100 PHE 100 100 100 PHE PHE L . n B 2 101 GLY 101 101 101 GLY GLY L . n B 2 102 GLY 102 102 102 GLY GLY L . n B 2 103 GLY 103 103 103 GLY GLY L . n B 2 104 THR 104 104 104 THR THR L . n B 2 105 LYS 105 105 105 LYS LYS L . n B 2 106 LEU 106 106 106 LEU LEU L . n B 2 107 THR 107 107 107 THR THR L . n B 2 108 VAL 108 108 108 VAL VAL L . n B 2 109 LEU 109 109 109 LEU LEU L . n B 2 110 GLU 110 110 110 GLU GLU L . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id ANF _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 500 _pdbx_nonpoly_scheme.auth_seq_num 500 _pdbx_nonpoly_scheme.pdb_mon_id ANF _pdbx_nonpoly_scheme.auth_mon_id ANF _pdbx_nonpoly_scheme.pdb_strand_id H _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13490 ? 1 MORE -71.8 ? 1 'SSA (A^2)' 38930 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -y+1,x,z 0.0000000000 -1.0000000000 0.0000000000 79.6720000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 4_565 y,-x+1,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 79.6720000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 79.6720000000 0.0000000000 -1.0000000000 0.0000000000 79.6720000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-08-18 2 'Structure model' 1 1 2013-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' Other 3 2 'Structure model' 'Source and taxonomy' 4 2 'Structure model' 'Structure summary' 5 2 'Structure model' 'Version format compliance' # _software.name REFMAC _software.classification refinement _software.version 5.2.0005 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OH H TYR 102 ? ? 1_555 OD1 L ASN 54 ? ? 2_675 2.05 2 1 O H GLY 42 ? ? 1_555 OG1 H THR 117 ? ? 4_565 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C H LYS 65 ? ? N H SER 66 ? ? 1.141 1.336 -0.195 0.023 Y 2 1 C H TRP 110 ? ? N H GLY 111 ? ? 1.596 1.336 0.260 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O H LYS 65 ? ? C H LYS 65 ? ? N H SER 66 ? ? 110.70 122.70 -12.00 1.60 Y 2 1 N H ARG 98 ? ? CA H ARG 98 ? ? C H ARG 98 ? ? 131.25 111.00 20.25 2.70 N 3 1 CB H ASP 108 ? ? CG H ASP 108 ? ? OD2 H ASP 108 ? ? 123.74 118.30 5.44 0.90 N 4 1 CA H TRP 110 ? ? C H TRP 110 ? ? N H GLY 111 ? ? 128.26 116.20 12.06 2.00 Y 5 1 O H TRP 110 ? ? C H TRP 110 ? ? N H GLY 111 ? ? 111.17 123.20 -12.03 1.70 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR H 32 ? ? -103.96 -156.27 2 1 ASN H 54 ? ? -68.65 -87.66 3 1 TYR H 60 ? ? -114.12 -139.24 4 1 GLU H 62 ? ? -66.58 21.30 5 1 LYS H 65 ? ? -42.50 -12.00 6 1 SER H 66 ? ? -94.36 -93.98 7 1 SER H 77 ? ? 84.29 92.87 8 1 ALA H 92 ? ? -171.14 -172.78 9 1 TRP H 100 ? ? 51.79 -156.55 10 1 TYR H 101 ? ? 86.08 9.81 11 1 TYR H 106 ? ? 61.78 -164.73 12 1 PRO L 42 ? ? -34.33 146.27 13 1 THR L 53 ? ? 67.36 -58.37 14 1 TYR L 94 ? ? -112.82 76.29 15 1 SER L 95 ? ? 75.90 -51.47 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C H LYS 65 ? ? N H SER 66 ? ? 1.14 2 1 C H ALA 97 ? ? N H ARG 98 ? ? 1.71 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name ANTHRONE _pdbx_entity_nonpoly.comp_id ANF #