HEADER MOTILITY 07-FEB-05 2BJR TITLE CRYSTAL STRUCTURE OF THE NEMATODE SPERM CELL MOTILITY TITLE 2 PROTEIN MFP2B COMPND MOL_ID: 1; COMPND 2 MOLECULE: MFP2B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASCARIS SUUM; SOURCE 3 ORGANISM_TAXID: 6253; SOURCE 4 CELL: SPERM; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: DE3(RIL); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMW172 KEYWDS MOTILITY, ASCARIS, NEMATODE, MSP EXPDTA X-RAY DIFFRACTION AUTHOR R.P.GRANT,S.M.BUTTERY,G.C.EKMAN,T.M.ROBERTS,M.STEWART REVDAT 2 24-FEB-09 2BJR 1 VERSN REVDAT 1 16-MAR-05 2BJR 0 JRNL AUTH R.P.GRANT,S.M.BUTTERY,G.C.EKMAN,T.M.ROBERTS, JRNL AUTH 2 M.STEWART JRNL TITL STRUCTURE OF MFP2 AND ITS FUNCTION IN ENHANCING JRNL TITL 2 MSP POLYMERIZATION IN ASCARIS SPERM AMOEBOID JRNL TITL 3 MOTILITY JRNL REF J.MOL.BIOL. V. 347 583 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15755452 JRNL DOI 10.1016/J.JMB.2005.01.054 REMARK 2 REMARK 2 RESOLUTION. 1.8 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOODWITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 71055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3721 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5204 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 299 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5524 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 925 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5807 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 5099 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7880 ; 1.513 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11916 ; 0.812 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 716 ; 6.884 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 790 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6524 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1188 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1008 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5917 ; 0.258 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3356 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 647 ; 0.184 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.186 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 90 ; 0.304 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 50 ; 0.320 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3562 ; 1.044 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5700 ; 1.885 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2245 ; 2.616 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2180 ; 4.143 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2BJR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-FEB-05. REMARK 100 THE PDBE ID CODE IS EBI-22834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SILICON CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74855 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 14.700 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.80 REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.8 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM REMARK 280 100 MM NA MES PH 4.5, 1.85 M AMMONIUM SULPHATE, 10 MM DTT, REMARK 280 10 MM ERCL3, 40 MM KSCN REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.47700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 ASN A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 MSE B 1 REMARK 465 PRO B 2 REMARK 465 ASN B 3 REMARK 465 PRO B 4 REMARK 465 PRO B 5 REMARK 465 PRO B 186 REMARK 465 ILE B 187 REMARK 465 PHE B 295 REMARK 465 GLY B 296 REMARK 465 ALA B 297 REMARK 465 LYS B 298 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; REMARK 480 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 480 I=INSERTION CODE): REMARK 480 M RES CSSEQI ATOMS REMARK 480 GLU B 182 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 150 - O HOH B 2186 2.13 REMARK 500 S SO4 A 1371 - O HOH A 2572 1.93 REMARK 500 O2 SO4 A 1371 - O HOH A 2572 2.01 REMARK 500 O4 SO4 A 1371 - O HOH A 2572 1.89 REMARK 500 O HOH A 2032 - O HOH A 2157 2.16 REMARK 500 O HOH A 2121 - O HOH A 2285 2.03 REMARK 500 O HOH A 2156 - O HOH A 2336 2.05 REMARK 500 O HOH A 2212 - O HOH A 2448 1.76 REMARK 500 O HOH A 2229 - O HOH A 2483 1.92 REMARK 500 O HOH B 2045 - O HOH B 2088 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 22 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 146 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 CYS A 200 CA - CB - SG ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 263 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP B 72 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 146 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 283 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 32 56.45 -150.49 REMARK 500 GLU A 299 -92.95 -109.31 REMARK 500 ASN B 32 57.61 -149.00 REMARK 500 GLU B 333 58.20 38.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 69 VAL A 70 149.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1369 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 86 NE2 REMARK 620 2 CYS A 174 SG 111.5 REMARK 620 3 CYS A 176 SG 108.6 113.4 REMARK 620 4 CYS A 179 SG 97.8 116.2 108.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1369 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 179 SG REMARK 620 2 HIS B 86 NE2 111.4 REMARK 620 3 CYS B 176 SG 106.9 101.2 REMARK 620 4 CYS B 174 SG 112.8 114.9 108.7 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1369 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1370 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1371 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B1369 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BJQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE NEMATODE SPERM CELL REMARK 900 MOTILITY PROTEIN MFP2 DBREF 2BJR A 1 368 UNP Q7YXJ9 Q7YXJ9_ASCSU 1 368 DBREF 2BJR B 1 368 UNP Q7YXJ9 Q7YXJ9_ASCSU 1 368 SEQRES 1 A 368 MSE PRO ASN PRO PRO ALA LYS GLU ASP THR TRP ALA PHE SEQRES 2 A 368 GLY PRO ILE GLY SER PRO PHE PRO ASP ASN PRO VAL LYS SEQRES 3 A 368 ALA LEU GLY GLN GLN ASN MSE TYR VAL ALA LEU TRP TYR SEQRES 4 A 368 LYS ASN GLY ARG PRO MSE HIS GLY ARG ALA TRP ASN ASN SEQRES 5 A 368 GLY GLY VAL ILE GLU CYS SER PHE PRO TYR ASN LYS SER SEQRES 6 A 368 GLU LEU THR GLY VAL LYS ASP LEU GLY GLY GLN ILE GLN SEQRES 7 A 368 VAL LEU GLN TYR LYS GLY ASN HIS LEU SER LEU GLY TYR SEQRES 8 A 368 TRP TYR ASN TRP ILE LYS TYR SER ASP ARG PHE ASP LYS SEQRES 9 A 368 MSE ASP LYS GLY ALA GLU MSE LEU ARG CYS GLY ASP SER SEQRES 10 A 368 PHE PRO ILE LEU TRP SER GLU ARG PRO GLY GLY ALA LEU SEQRES 11 A 368 LEU GLY TYR ALA ASP ASN LYS THR GLU ILE ALA ARG PHE SEQRES 12 A 368 SER HIS ASP GLY LYS VAL ASP GLU VAL SER GLY SER ALA SEQRES 13 A 368 LEU ALA ASN MSE LEU ILE ILE ALA ARG GLU LEU LYS GLY SEQRES 14 A 368 GLY PRO PRO TYR CYS GLU CYS GLU GLU CYS LYS SER GLU SEQRES 15 A 368 PRO PRO LYS PRO ILE VAL ARG VAL THR LEU ASN GLU TRP SEQRES 16 A 368 ALA ASP PHE ARG CYS GLY ASP PRO TRP PRO THR VAL GLY SEQRES 17 A 368 THR PRO VAL ARG ALA LEU GLY ARG SER LEU ASP THR LEU SEQRES 18 A 368 PRO GLY GLU ASN PRO ASP GLN TYR VAL ALA LEU TRP TYR SEQRES 19 A 368 GLN SER GLY GLU PRO VAL MSE GLY ARG ILE TRP ASN ASP SEQRES 20 A 368 GLY GLY LYS ILE ALA ALA CYS PHE GLY TRP GLY GLY HIS SEQRES 21 A 368 GLU TYR ARG GLN LYS ILE GLY SER ILE GLN ILE LEU TYR SEQRES 22 A 368 GLU LEU PRO GLU ALA ILE ARG GLY PHE ASP TYR ASP TRP SEQRES 23 A 368 LYS PRO PHE PRO GLU ALA ALA GLN PHE GLY ALA LYS GLU SEQRES 24 A 368 TRP ILE PRO VAL HIS VAL ASP HIS HIS LYS GLY ASN ILE SEQRES 25 A 368 SER PRO ALA VAL LEU ILE VAL ASP GLY LYS GLU ILE LEU SEQRES 26 A 368 GLY LYS ALA ASP ILE ARG ASN GLU ARG ALA THR ILE GLY SEQRES 27 A 368 TYR GLY GLY THR GLU LYS VAL LEU VAL GLY PRO ALA VAL SEQRES 28 A 368 HIS SER CYS MSE VAL LEU CYS ARG LYS ALA LYS PRO GLY SEQRES 29 A 368 CYS THR ILE ASP SEQRES 1 B 368 MSE PRO ASN PRO PRO ALA LYS GLU ASP THR TRP ALA PHE SEQRES 2 B 368 GLY PRO ILE GLY SER PRO PHE PRO ASP ASN PRO VAL LYS SEQRES 3 B 368 ALA LEU GLY GLN GLN ASN MSE TYR VAL ALA LEU TRP TYR SEQRES 4 B 368 LYS ASN GLY ARG PRO MSE HIS GLY ARG ALA TRP ASN ASN SEQRES 5 B 368 GLY GLY VAL ILE GLU CYS SER PHE PRO TYR ASN LYS SER SEQRES 6 B 368 GLU LEU THR GLY VAL LYS ASP LEU GLY GLY GLN ILE GLN SEQRES 7 B 368 VAL LEU GLN TYR LYS GLY ASN HIS LEU SER LEU GLY TYR SEQRES 8 B 368 TRP TYR ASN TRP ILE LYS TYR SER ASP ARG PHE ASP LYS SEQRES 9 B 368 MSE ASP LYS GLY ALA GLU MSE LEU ARG CYS GLY ASP SER SEQRES 10 B 368 PHE PRO ILE LEU TRP SER GLU ARG PRO GLY GLY ALA LEU SEQRES 11 B 368 LEU GLY TYR ALA ASP ASN LYS THR GLU ILE ALA ARG PHE SEQRES 12 B 368 SER HIS ASP GLY LYS VAL ASP GLU VAL SER GLY SER ALA SEQRES 13 B 368 LEU ALA ASN MSE LEU ILE ILE ALA ARG GLU LEU LYS GLY SEQRES 14 B 368 GLY PRO PRO TYR CYS GLU CYS GLU GLU CYS LYS SER GLU SEQRES 15 B 368 PRO PRO LYS PRO ILE VAL ARG VAL THR LEU ASN GLU TRP SEQRES 16 B 368 ALA ASP PHE ARG CYS GLY ASP PRO TRP PRO THR VAL GLY SEQRES 17 B 368 THR PRO VAL ARG ALA LEU GLY ARG SER LEU ASP THR LEU SEQRES 18 B 368 PRO GLY GLU ASN PRO ASP GLN TYR VAL ALA LEU TRP TYR SEQRES 19 B 368 GLN SER GLY GLU PRO VAL MSE GLY ARG ILE TRP ASN ASP SEQRES 20 B 368 GLY GLY LYS ILE ALA ALA CYS PHE GLY TRP GLY GLY HIS SEQRES 21 B 368 GLU TYR ARG GLN LYS ILE GLY SER ILE GLN ILE LEU TYR SEQRES 22 B 368 GLU LEU PRO GLU ALA ILE ARG GLY PHE ASP TYR ASP TRP SEQRES 23 B 368 LYS PRO PHE PRO GLU ALA ALA GLN PHE GLY ALA LYS GLU SEQRES 24 B 368 TRP ILE PRO VAL HIS VAL ASP HIS HIS LYS GLY ASN ILE SEQRES 25 B 368 SER PRO ALA VAL LEU ILE VAL ASP GLY LYS GLU ILE LEU SEQRES 26 B 368 GLY LYS ALA ASP ILE ARG ASN GLU ARG ALA THR ILE GLY SEQRES 27 B 368 TYR GLY GLY THR GLU LYS VAL LEU VAL GLY PRO ALA VAL SEQRES 28 B 368 HIS SER CYS MSE VAL LEU CYS ARG LYS ALA LYS PRO GLY SEQRES 29 B 368 CYS THR ILE ASP MODRES 2BJR MSE A 33 MET SELENOMETHIONINE MODRES 2BJR MSE A 45 MET SELENOMETHIONINE MODRES 2BJR MSE A 105 MET SELENOMETHIONINE MODRES 2BJR MSE A 111 MET SELENOMETHIONINE MODRES 2BJR MSE A 160 MET SELENOMETHIONINE MODRES 2BJR MSE A 241 MET SELENOMETHIONINE MODRES 2BJR MSE A 355 MET SELENOMETHIONINE MODRES 2BJR MSE B 33 MET SELENOMETHIONINE MODRES 2BJR MSE B 45 MET SELENOMETHIONINE MODRES 2BJR MSE B 105 MET SELENOMETHIONINE MODRES 2BJR MSE B 111 MET SELENOMETHIONINE MODRES 2BJR MSE B 160 MET SELENOMETHIONINE MODRES 2BJR MSE B 241 MET SELENOMETHIONINE MODRES 2BJR MSE B 355 MET SELENOMETHIONINE HET MSE A 33 8 HET MSE A 45 8 HET MSE A 105 8 HET MSE A 111 8 HET MSE A 160 8 HET MSE A 241 8 HET MSE A 355 8 HET MSE B 33 8 HET MSE B 45 8 HET MSE B 105 8 HET MSE B 111 8 HET MSE B 160 8 HET MSE B 241 8 HET MSE B 355 8 HET ZN A1369 1 HET SO4 A1370 5 HET SO4 A1371 5 HET ZN B1369 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 ZN 2(ZN 2+) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *925(H2 O1) HELIX 1 1 GLY A 69 GLY A 74 1 6 HELIX 2 2 ASN A 85 GLY A 90 1 6 HELIX 3 3 ASP A 100 LYS A 107 1 8 HELIX 4 4 SER A 155 ALA A 158 5 4 HELIX 5 5 CYS A 176 SER A 181 1 6 HELIX 6 6 ALA A 213 ARG A 216 5 4 HELIX 7 7 PHE A 289 ALA A 293 1 5 HELIX 8 8 GLN A 294 LYS A 298 5 5 HELIX 9 9 PRO A 349 HIS A 352 5 4 HELIX 10 10 GLY B 69 GLY B 74 1 6 HELIX 11 11 ASN B 85 GLY B 90 1 6 HELIX 12 12 ASP B 100 LYS B 107 1 8 HELIX 13 13 SER B 153 ALA B 158 5 6 HELIX 14 14 CYS B 176 SER B 181 1 6 HELIX 15 15 ALA B 213 ARG B 216 5 4 HELIX 16 16 PHE B 289 ALA B 293 1 5 HELIX 17 17 PRO B 349 SER B 353 5 5 SHEET 1 AA 6 THR A 10 PRO A 15 0 SHEET 2 AA 6 GLN A 76 GLN A 81 -1 O ILE A 77 N GLY A 14 SHEET 3 AA 6 TYR A 34 LYS A 40 -1 O VAL A 35 N LEU A 80 SHEET 4 AA 6 ARG A 43 ASN A 52 -1 O ARG A 43 N LYS A 40 SHEET 5 AA 6 VAL A 55 TYR A 62 -1 O VAL A 55 N ASN A 52 SHEET 6 AA 6 SER A 65 LEU A 67 -1 O SER A 65 N TYR A 62 SHEET 1 AB 3 TRP A 92 LYS A 97 0 SHEET 2 AB 3 LEU A 161 GLU A 166 -1 O ILE A 162 N ILE A 96 SHEET 3 AB 3 GLU A 110 MSE A 111 -1 O GLU A 110 N ARG A 165 SHEET 1 AC 4 SER A 117 TRP A 122 0 SHEET 2 AC 4 LEU A 130 ASP A 135 -1 O LEU A 130 N TRP A 122 SHEET 3 AC 4 ILE A 140 HIS A 145 -1 O ILE A 140 N ASP A 135 SHEET 4 AC 4 LYS A 148 SER A 153 -1 O LYS A 148 N HIS A 145 SHEET 1 AD 3 GLU A 194 ARG A 199 0 SHEET 2 AD 3 SER A 268 GLU A 274 -1 O ILE A 269 N PHE A 198 SHEET 3 AD 3 THR A 209 PRO A 210 -1 O THR A 209 N GLU A 274 SHEET 1 AE 6 GLU A 194 ARG A 199 0 SHEET 2 AE 6 SER A 268 GLU A 274 -1 O ILE A 269 N PHE A 198 SHEET 3 AE 6 TYR A 229 GLN A 235 -1 O VAL A 230 N LEU A 272 SHEET 4 AE 6 GLU A 238 ASP A 247 -1 O GLU A 238 N GLN A 235 SHEET 5 AE 6 LYS A 250 TRP A 257 -1 O LYS A 250 N ASP A 247 SHEET 6 AE 6 HIS A 260 TYR A 262 -1 O HIS A 260 N TRP A 257 SHEET 1 AF 3 PHE A 282 PRO A 288 0 SHEET 2 AF 3 MSE A 355 ALA A 361 -1 O VAL A 356 N LYS A 287 SHEET 3 AF 3 TRP A 300 PRO A 302 -1 O ILE A 301 N ARG A 359 SHEET 1 AG 6 PHE A 282 PRO A 288 0 SHEET 2 AG 6 MSE A 355 ALA A 361 -1 O VAL A 356 N LYS A 287 SHEET 3 AG 6 SER A 313 VAL A 319 -1 O PRO A 314 N LEU A 357 SHEET 4 AG 6 LYS A 322 ASP A 329 -1 O LYS A 322 N VAL A 319 SHEET 5 AG 6 ARG A 334 TYR A 339 -1 O ARG A 334 N ASP A 329 SHEET 6 AG 6 THR A 342 VAL A 347 -1 O THR A 342 N TYR A 339 SHEET 1 BA 6 THR B 10 PRO B 15 0 SHEET 2 BA 6 GLN B 76 GLN B 81 -1 O ILE B 77 N GLY B 14 SHEET 3 BA 6 TYR B 34 LYS B 40 -1 O VAL B 35 N LEU B 80 SHEET 4 BA 6 ARG B 43 ASN B 52 -1 O ARG B 43 N LYS B 40 SHEET 5 BA 6 VAL B 55 TYR B 62 -1 O VAL B 55 N ASN B 52 SHEET 6 BA 6 SER B 65 LEU B 67 -1 O SER B 65 N TYR B 62 SHEET 1 BB 3 TRP B 92 LYS B 97 0 SHEET 2 BB 3 LEU B 161 GLU B 166 -1 O ILE B 162 N ILE B 96 SHEET 3 BB 3 GLU B 110 MSE B 111 -1 O GLU B 110 N ARG B 165 SHEET 1 BC 4 SER B 117 TRP B 122 0 SHEET 2 BC 4 LEU B 130 ASP B 135 -1 O LEU B 130 N TRP B 122 SHEET 3 BC 4 ILE B 140 HIS B 145 -1 O ILE B 140 N ASP B 135 SHEET 4 BC 4 LYS B 148 VAL B 152 -1 O LYS B 148 N HIS B 145 SHEET 1 BD 6 GLU B 194 ARG B 199 0 SHEET 2 BD 6 SER B 268 TYR B 273 -1 O ILE B 269 N PHE B 198 SHEET 3 BD 6 TYR B 229 GLN B 235 -1 O VAL B 230 N LEU B 272 SHEET 4 BD 6 GLU B 238 ASP B 247 -1 O GLU B 238 N GLN B 235 SHEET 5 BD 6 LYS B 250 TRP B 257 -1 O LYS B 250 N ASP B 247 SHEET 6 BD 6 HIS B 260 TYR B 262 -1 O HIS B 260 N TRP B 257 SHEET 1 BE 3 PHE B 282 PRO B 288 0 SHEET 2 BE 3 MSE B 355 ALA B 361 -1 O VAL B 356 N LYS B 287 SHEET 3 BE 3 ILE B 301 PRO B 302 -1 O ILE B 301 N ARG B 359 SHEET 1 BF 6 PHE B 282 PRO B 288 0 SHEET 2 BF 6 MSE B 355 ALA B 361 -1 O VAL B 356 N LYS B 287 SHEET 3 BF 6 SER B 313 VAL B 319 -1 O PRO B 314 N LEU B 357 SHEET 4 BF 6 LYS B 322 ASP B 329 -1 O LYS B 322 N VAL B 319 SHEET 5 BF 6 ARG B 334 TYR B 339 -1 O ARG B 334 N ASP B 329 SHEET 6 BF 6 THR B 342 VAL B 347 -1 O THR B 342 N TYR B 339 LINK C ASN A 32 N MSE A 33 1555 1555 1.31 LINK C MSE A 33 N TYR A 34 1555 1555 1.35 LINK C PRO A 44 N MSE A 45 1555 1555 1.32 LINK C MSE A 45 N HIS A 46 1555 1555 1.33 LINK C LYS A 104 N MSE A 105 1555 1555 1.31 LINK C MSE A 105 N ASP A 106 1555 1555 1.32 LINK C GLU A 110 N MSE A 111 1555 1555 1.32 LINK C MSE A 111 N LEU A 112 1555 1555 1.32 LINK C ASN A 159 N MSE A 160 1555 1555 1.32 LINK C MSE A 160 N LEU A 161 1555 1555 1.32 LINK C VAL A 240 N MSE A 241 1555 1555 1.33 LINK C MSE A 241 N GLY A 242 1555 1555 1.31 LINK C CYS A 354 N MSE A 355 1555 1555 1.33 LINK C MSE A 355 N VAL A 356 1555 1555 1.33 LINK ZN ZN A1369 SG CYS A 176 1555 1555 2.30 LINK ZN ZN A1369 SG CYS A 174 1555 1555 2.27 LINK ZN ZN A1369 NE2 HIS A 86 1555 1555 2.04 LINK ZN ZN A1369 SG CYS A 179 1555 1555 2.12 LINK C ASN B 32 N MSE B 33 1555 1555 1.32 LINK C MSE B 33 N TYR B 34 1555 1555 1.32 LINK C PRO B 44 N MSE B 45 1555 1555 1.33 LINK C MSE B 45 N HIS B 46 1555 1555 1.33 LINK C LYS B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N ASP B 106 1555 1555 1.34 LINK C GLU B 110 N MSE B 111 1555 1555 1.32 LINK C MSE B 111 N LEU B 112 1555 1555 1.33 LINK C ASN B 159 N MSE B 160 1555 1555 1.33 LINK C MSE B 160 N LEU B 161 1555 1555 1.32 LINK C VAL B 240 N MSE B 241 1555 1555 1.32 LINK C MSE B 241 N GLY B 242 1555 1555 1.33 LINK C CYS B 354 N MSE B 355 1555 1555 1.33 LINK C MSE B 355 N VAL B 356 1555 1555 1.33 LINK ZN ZN B1369 NE2 HIS B 86 1555 1555 2.02 LINK ZN ZN B1369 SG CYS B 176 1555 1555 2.57 LINK ZN ZN B1369 SG CYS B 174 1555 1555 2.25 LINK ZN ZN B1369 SG CYS B 179 1555 1555 2.14 SITE 1 AC1 4 HIS A 86 CYS A 174 CYS A 176 CYS A 179 SITE 1 AC2 7 ALA A 12 PHE A 13 GLN A 81 HOH A2570 SITE 2 AC2 7 HOH A2571 ASN B 41 TYR B 62 SITE 1 AC3 4 TRP A 122 PRO A 126 HOH A2572 HOH A2573 SITE 1 AC4 4 HIS B 86 CYS B 174 CYS B 176 CYS B 179 CRYST1 87.513 52.954 95.542 90.00 99.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011427 0.000000 0.001845 0.00000 SCALE2 0.000000 0.018884 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010602 0.00000