data_2BKW # _entry.id 2BKW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2BKW PDBE EBI-23053 WWPDB D_1290023053 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BKW _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-02-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Meyer, P.' 1 'Liger, D.' 2 'Leulliot, N.' 3 'Quevillon-Cheruel, S.' 4 'Zhou, C.Z.' 5 'Borel, F.' 6 'Ferrer, J.L.' 7 'Poupon, A.' 8 'Janin, J.' 9 'van Tilbeurgh, H.' 10 # _citation.id primary _citation.title 'Crystal Structure and Confirmation of the Alanine:Glyoxylate Aminotransferase Activity of the Yfl030W Yeast Protein' _citation.journal_abbrev Biochimie _citation.journal_volume 87 _citation.page_first 1041 _citation.page_last ? _citation.year 2005 _citation.journal_id_ASTM BICMBE _citation.country FR _citation.journal_id_ISSN 0300-9084 _citation.journal_id_CSD 0466 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16226833 _citation.pdbx_database_id_DOI 10.1016/J.BIOCHI.2005.09.001 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Meyer, P.' 1 primary 'Liger, D.' 2 primary 'Leulliot, N.' 3 primary 'Quevillon-Cheruel, S.' 4 primary 'Zhou, C.Z.' 5 primary 'Borel, F.' 6 primary 'Ferrer, J.L.' 7 primary 'Poupon, A.' 8 primary 'Janin, J.' 9 primary 'Van Tilbeurgh, H.' 10 # _cell.entry_id 2BKW _cell.length_a 57.400 _cell.length_b 57.400 _cell.length_c 184.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BKW _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ALANINE-GLYOXYLATE AMINOTRANSFERASE 1' 42283.309 1 2.6.1.44 ? ? ;PYRIDOXAL 5'-PHOSPHATE LINK TO A 201, GLYOXYLATE ; 2 non-polymer syn "PYRIDOXAL-5'-PHOSPHATE" 247.142 1 ? ? ? ? 3 non-polymer syn 'GLYOXYLIC ACID' 74.035 1 ? ? ? ? 4 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)TKSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFA SNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDL KAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRF(MSE)DYALNDSKNGHVH GYFSSLRRWTPI(MSE)ENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHRE(MSE)SDWFKDSLVNGLQLT SVSRYPSN(MSE)SAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGH(MSE)GVTACNKNLPY(MSE)KN CFDLIKLALQRKK ; _entity_poly.pdbx_seq_one_letter_code_can ;MTKSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFI LSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAIS QAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRR WTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTA VYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 THR n 1 3 LYS n 1 4 SER n 1 5 VAL n 1 6 ASP n 1 7 THR n 1 8 LEU n 1 9 LEU n 1 10 ILE n 1 11 PRO n 1 12 GLY n 1 13 PRO n 1 14 ILE n 1 15 ILE n 1 16 LEU n 1 17 SER n 1 18 GLY n 1 19 ALA n 1 20 VAL n 1 21 GLN n 1 22 LYS n 1 23 ALA n 1 24 LEU n 1 25 ASP n 1 26 VAL n 1 27 PRO n 1 28 SER n 1 29 LEU n 1 30 GLY n 1 31 HIS n 1 32 THR n 1 33 SER n 1 34 PRO n 1 35 GLU n 1 36 PHE n 1 37 VAL n 1 38 SER n 1 39 ILE n 1 40 PHE n 1 41 GLN n 1 42 ARG n 1 43 VAL n 1 44 LEU n 1 45 LYS n 1 46 ASN n 1 47 THR n 1 48 ARG n 1 49 ALA n 1 50 VAL n 1 51 PHE n 1 52 LYS n 1 53 SER n 1 54 ALA n 1 55 ALA n 1 56 ALA n 1 57 SER n 1 58 LYS n 1 59 SER n 1 60 GLN n 1 61 PRO n 1 62 PHE n 1 63 VAL n 1 64 LEU n 1 65 ALA n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 LEU n 1 71 GLY n 1 72 TRP n 1 73 ASP n 1 74 ILE n 1 75 PHE n 1 76 ALA n 1 77 SER n 1 78 ASN n 1 79 PHE n 1 80 ILE n 1 81 LEU n 1 82 SER n 1 83 LYS n 1 84 ALA n 1 85 PRO n 1 86 ASN n 1 87 LYS n 1 88 ASN n 1 89 VAL n 1 90 LEU n 1 91 VAL n 1 92 VAL n 1 93 SER n 1 94 THR n 1 95 GLY n 1 96 THR n 1 97 PHE n 1 98 SER n 1 99 ASP n 1 100 ARG n 1 101 PHE n 1 102 ALA n 1 103 ASP n 1 104 CYS n 1 105 LEU n 1 106 ARG n 1 107 SER n 1 108 TYR n 1 109 GLY n 1 110 ALA n 1 111 GLN n 1 112 VAL n 1 113 ASP n 1 114 VAL n 1 115 VAL n 1 116 ARG n 1 117 PRO n 1 118 LEU n 1 119 LYS n 1 120 ILE n 1 121 GLY n 1 122 GLU n 1 123 SER n 1 124 VAL n 1 125 PRO n 1 126 LEU n 1 127 GLU n 1 128 LEU n 1 129 ILE n 1 130 THR n 1 131 GLU n 1 132 LYS n 1 133 LEU n 1 134 SER n 1 135 GLN n 1 136 ASN n 1 137 SER n 1 138 TYR n 1 139 GLY n 1 140 ALA n 1 141 VAL n 1 142 THR n 1 143 VAL n 1 144 THR n 1 145 HIS n 1 146 VAL n 1 147 ASP n 1 148 THR n 1 149 SER n 1 150 THR n 1 151 ALA n 1 152 VAL n 1 153 LEU n 1 154 SER n 1 155 ASP n 1 156 LEU n 1 157 LYS n 1 158 ALA n 1 159 ILE n 1 160 SER n 1 161 GLN n 1 162 ALA n 1 163 ILE n 1 164 LYS n 1 165 GLN n 1 166 THR n 1 167 SER n 1 168 PRO n 1 169 GLU n 1 170 THR n 1 171 PHE n 1 172 PHE n 1 173 VAL n 1 174 VAL n 1 175 ASP n 1 176 ALA n 1 177 VAL n 1 178 CYS n 1 179 SER n 1 180 ILE n 1 181 GLY n 1 182 CYS n 1 183 GLU n 1 184 GLU n 1 185 PHE n 1 186 GLU n 1 187 PHE n 1 188 ASP n 1 189 GLU n 1 190 TRP n 1 191 GLY n 1 192 VAL n 1 193 ASP n 1 194 PHE n 1 195 ALA n 1 196 LEU n 1 197 THR n 1 198 ALA n 1 199 SER n 1 200 GLN n 1 201 LYS n 1 202 ALA n 1 203 ILE n 1 204 GLY n 1 205 ALA n 1 206 PRO n 1 207 ALA n 1 208 GLY n 1 209 LEU n 1 210 SER n 1 211 ILE n 1 212 SER n 1 213 LEU n 1 214 CYS n 1 215 SER n 1 216 SER n 1 217 ARG n 1 218 PHE n 1 219 MSE n 1 220 ASP n 1 221 TYR n 1 222 ALA n 1 223 LEU n 1 224 ASN n 1 225 ASP n 1 226 SER n 1 227 LYS n 1 228 ASN n 1 229 GLY n 1 230 HIS n 1 231 VAL n 1 232 HIS n 1 233 GLY n 1 234 TYR n 1 235 PHE n 1 236 SER n 1 237 SER n 1 238 LEU n 1 239 ARG n 1 240 ARG n 1 241 TRP n 1 242 THR n 1 243 PRO n 1 244 ILE n 1 245 MSE n 1 246 GLU n 1 247 ASN n 1 248 TYR n 1 249 GLU n 1 250 ALA n 1 251 GLY n 1 252 LYS n 1 253 GLY n 1 254 ALA n 1 255 TYR n 1 256 PHE n 1 257 ALA n 1 258 THR n 1 259 PRO n 1 260 PRO n 1 261 VAL n 1 262 GLN n 1 263 LEU n 1 264 ILE n 1 265 ASN n 1 266 SER n 1 267 LEU n 1 268 ASP n 1 269 VAL n 1 270 ALA n 1 271 LEU n 1 272 LYS n 1 273 GLU n 1 274 ILE n 1 275 LEU n 1 276 GLU n 1 277 GLU n 1 278 GLY n 1 279 LEU n 1 280 HIS n 1 281 LYS n 1 282 ARG n 1 283 TRP n 1 284 ASP n 1 285 LEU n 1 286 HIS n 1 287 ARG n 1 288 GLU n 1 289 MSE n 1 290 SER n 1 291 ASP n 1 292 TRP n 1 293 PHE n 1 294 LYS n 1 295 ASP n 1 296 SER n 1 297 LEU n 1 298 VAL n 1 299 ASN n 1 300 GLY n 1 301 LEU n 1 302 GLN n 1 303 LEU n 1 304 THR n 1 305 SER n 1 306 VAL n 1 307 SER n 1 308 ARG n 1 309 TYR n 1 310 PRO n 1 311 SER n 1 312 ASN n 1 313 MSE n 1 314 SER n 1 315 ALA n 1 316 HIS n 1 317 GLY n 1 318 LEU n 1 319 THR n 1 320 ALA n 1 321 VAL n 1 322 TYR n 1 323 VAL n 1 324 ALA n 1 325 ASP n 1 326 PRO n 1 327 PRO n 1 328 ASP n 1 329 VAL n 1 330 ILE n 1 331 ALA n 1 332 PHE n 1 333 LEU n 1 334 LYS n 1 335 SER n 1 336 HIS n 1 337 GLY n 1 338 VAL n 1 339 VAL n 1 340 ILE n 1 341 ALA n 1 342 GLY n 1 343 GLY n 1 344 ILE n 1 345 HIS n 1 346 LYS n 1 347 ASP n 1 348 ILE n 1 349 GLY n 1 350 PRO n 1 351 LYS n 1 352 TYR n 1 353 ILE n 1 354 ARG n 1 355 ILE n 1 356 GLY n 1 357 HIS n 1 358 MSE n 1 359 GLY n 1 360 VAL n 1 361 THR n 1 362 ALA n 1 363 CYS n 1 364 ASN n 1 365 LYS n 1 366 ASN n 1 367 LEU n 1 368 PRO n 1 369 TYR n 1 370 MSE n 1 371 LYS n 1 372 ASN n 1 373 CYS n 1 374 PHE n 1 375 ASP n 1 376 LEU n 1 377 ILE n 1 378 LYS n 1 379 LEU n 1 380 ALA n 1 381 LEU n 1 382 GLN n 1 383 ARG n 1 384 LYS n 1 385 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;BAKER'S YEAST ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SACCHAROMYCES CEREVISIAE S288C' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET9 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AGX1_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P43567 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2BKW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 385 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P43567 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 385 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 385 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLV non-polymer . 'GLYOXYLIC ACID' 'GLYOXALATE, GLYOXYLATE' 'C2 H2 O3' 74.035 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLP non-polymer . "PYRIDOXAL-5'-PHOSPHATE" 'VITAMIN B6 Phosphate' 'C8 H10 N O6 P' 247.142 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2BKW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_percent_sol 38 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M AMONIUM SULPHATE, 30% PEG MME 2000, 0.1 M SODIUM ACETATE, PH4.5' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9784 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength 0.9784 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2BKW _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.000 _reflns.d_resolution_high 2.570 _reflns.number_obs 11595 _reflns.number_all ? _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs 0.04000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.5000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.700 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.57 _reflns_shell.d_res_low 2.65 _reflns_shell.percent_possible_all 92.2 _reflns_shell.Rmerge_I_obs 0.16000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.900 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2BKW _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11593 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28 _refine.ls_d_res_high 2.57 _refine.ls_percent_reflns_obs 97.5 _refine.ls_R_factor_obs 0.1985 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1985 _refine.ls_R_factor_R_free 0.2583 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 599 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 2.348 _refine.aniso_B[2][2] 2.348 _refine.aniso_B[3][3] -4.697 _refine.aniso_B[1][2] -2.742 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.31765 _refine.solvent_model_param_bsol 16.8386 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'FIRST AND LAST TWO RESIDUES ARE ABSENT FROM THE MODEL' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2919 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 3028 _refine_hist.d_res_high 2.57 _refine_hist.d_res_low 28 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007020 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.33127 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.34 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.171 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.241 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.262 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 11 _refine_ls_shell.d_res_high 2.57 _refine_ls_shell.d_res_low 2.65 _refine_ls_shell.number_reflns_R_work 767 _refine_ls_shell.R_factor_R_work 0.174 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.225 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5 _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP_LLP.PARAM PROTEIN_LLP.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 GLV.PARAM GLV.TOP # _struct.entry_id 2BKW _struct.title 'Yeast alanine:glyoxylate aminotransferase YFL030w' _struct.pdbx_descriptor 'ALANINE-GLYOXYLATE AMINOTRANSFERASE 1 (E.C.2.6.1.44)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BKW _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'ANALINE-GLYOXYLATE AMINOTRANSFERASE, PYRIDOXAL-5-PHOSPHATE, SAD, GLYCOLATE PATHWAY, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 17 ? ALA A 23 ? SER A 17 ALA A 23 1 ? 7 HELX_P HELX_P2 2 SER A 33 ? PHE A 51 ? SER A 33 PHE A 51 1 ? 19 HELX_P HELX_P3 3 ALA A 54 ? LYS A 58 ? ALA A 54 LYS A 58 5 ? 5 HELX_P HELX_P4 4 THR A 69 ? ILE A 80 ? THR A 69 ILE A 80 1 ? 12 HELX_P HELX_P5 5 GLY A 95 ? TYR A 108 ? GLY A 95 TYR A 108 1 ? 14 HELX_P HELX_P6 6 PRO A 125 ? ASN A 136 ? PRO A 125 ASN A 136 1 ? 12 HELX_P HELX_P7 7 ASP A 155 ? SER A 167 ? ASP A 155 SER A 167 1 ? 13 HELX_P HELX_P8 8 SER A 215 ? LEU A 223 ? SER A 215 LEU A 223 1 ? 9 HELX_P HELX_P9 9 ASN A 224 ? GLY A 229 ? ASN A 224 GLY A 229 1 ? 6 HELX_P HELX_P10 10 SER A 237 ? ALA A 250 ? SER A 237 ALA A 250 1 ? 14 HELX_P HELX_P11 11 PRO A 260 ? GLY A 278 ? PRO A 260 GLY A 278 1 ? 19 HELX_P HELX_P12 12 GLY A 278 ? ASN A 299 ? GLY A 278 ASN A 299 1 ? 22 HELX_P HELX_P13 13 ASP A 325 ? HIS A 336 ? ASP A 325 HIS A 336 1 ? 12 HELX_P HELX_P14 14 ILE A 348 ? PRO A 350 ? ILE A 348 PRO A 350 5 ? 3 HELX_P HELX_P15 15 MSE A 358 ? ALA A 362 ? MSE A 358 ALA A 362 5 ? 5 HELX_P HELX_P16 16 PRO A 368 ? LEU A 381 ? PRO A 368 LEU A 381 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LYS 201 NZ ? ? ? 1_555 B PLP . C4A ? ? A LYS 201 A PLP 1201 1_555 ? ? ? ? ? ? ? 1.398 ? covale2 covale ? ? A PHE 218 C ? ? ? 1_555 A MSE 219 N ? ? A PHE 218 A MSE 219 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A MSE 219 C ? ? ? 1_555 A ASP 220 N ? ? A MSE 219 A ASP 220 1_555 ? ? ? ? ? ? ? 1.334 ? covale4 covale ? ? A ILE 244 C ? ? ? 1_555 A MSE 245 N ? ? A ILE 244 A MSE 245 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? A MSE 245 C ? ? ? 1_555 A GLU 246 N ? ? A MSE 245 A GLU 246 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? A GLU 288 C ? ? ? 1_555 A MSE 289 N ? ? A GLU 288 A MSE 289 1_555 ? ? ? ? ? ? ? 1.324 ? covale7 covale ? ? A MSE 289 C ? ? ? 1_555 A SER 290 N ? ? A MSE 289 A SER 290 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A ASN 312 C ? ? ? 1_555 A MSE 313 N ? ? A ASN 312 A MSE 313 1_555 ? ? ? ? ? ? ? 1.326 ? covale9 covale ? ? A MSE 313 C ? ? ? 1_555 A SER 314 N ? ? A MSE 313 A SER 314 1_555 ? ? ? ? ? ? ? 1.330 ? covale10 covale ? ? A HIS 357 C ? ? ? 1_555 A MSE 358 N ? ? A HIS 357 A MSE 358 1_555 ? ? ? ? ? ? ? 1.334 ? covale11 covale ? ? A MSE 358 C ? ? ? 1_555 A GLY 359 N ? ? A MSE 358 A GLY 359 1_555 ? ? ? ? ? ? ? 1.328 ? covale12 covale ? ? A TYR 369 C ? ? ? 1_555 A MSE 370 N ? ? A TYR 369 A MSE 370 1_555 ? ? ? ? ? ? ? 1.322 ? covale13 covale ? ? A MSE 370 C ? ? ? 1_555 A LYS 371 N ? ? A MSE 370 A LYS 371 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 12 A . ? GLY 12 A PRO 13 A ? PRO 13 A 1 0.17 2 TYR 309 A . ? TYR 309 A PRO 310 A ? PRO 310 A 1 -0.28 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 7 ? AC ? 2 ? AD ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? parallel AB 4 5 ? parallel AB 5 6 ? parallel AB 6 7 ? parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 7 ? LEU A 8 ? THR A 7 LEU A 8 AA 2 VAL A 338 ? VAL A 339 ? VAL A 338 VAL A 339 AB 1 GLN A 60 ? ALA A 65 ? GLN A 60 ALA A 65 AB 2 LEU A 209 ? CYS A 214 ? LEU A 209 CYS A 214 AB 3 PHE A 194 ? ALA A 198 ? PHE A 194 ALA A 198 AB 4 PHE A 171 ? ASP A 175 ? PHE A 171 ASP A 175 AB 5 ALA A 140 ? THR A 144 ? ALA A 140 THR A 144 AB 6 ASN A 88 ? VAL A 92 ? ASN A 88 VAL A 92 AB 7 GLN A 111 ? VAL A 115 ? GLN A 111 VAL A 115 AC 1 VAL A 146 ? ASP A 147 ? VAL A 146 ASP A 147 AC 2 VAL A 152 ? LEU A 153 ? VAL A 152 LEU A 153 AD 1 THR A 304 ? SER A 305 ? THR A 304 SER A 305 AD 2 THR A 319 ? TYR A 322 ? THR A 319 TYR A 322 AD 3 TYR A 352 ? ILE A 355 ? TYR A 352 ILE A 355 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O THR A 7 ? O THR A 7 N VAL A 339 ? N VAL A 339 AB 1 2 N LEU A 64 ? N LEU A 64 O SER A 210 ? O SER A 210 AB 2 3 N LEU A 213 ? N LEU A 213 O ALA A 195 ? O ALA A 195 AB 3 4 N LEU A 196 ? N LEU A 196 O VAL A 174 ? O VAL A 174 AB 4 5 N VAL A 173 ? N VAL A 173 O VAL A 141 ? O VAL A 141 AB 5 6 N THR A 142 ? N THR A 142 O LEU A 90 ? O LEU A 90 AB 6 7 N VAL A 89 ? N VAL A 89 O GLN A 111 ? O GLN A 111 AC 1 2 N ASP A 147 ? N ASP A 147 O VAL A 152 ? O VAL A 152 AD 1 2 N THR A 304 ? N THR A 304 O TYR A 322 ? O TYR A 322 AD 2 3 N VAL A 321 ? N VAL A 321 O ILE A 353 ? O ILE A 353 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE PLP A 1201' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GLV A 1384' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 SER A 67 ? SER A 67 . ? 1_555 ? 2 AC1 16 GLY A 68 ? GLY A 68 . ? 1_555 ? 3 AC1 16 THR A 69 ? THR A 69 . ? 1_555 ? 4 AC1 16 TRP A 72 ? TRP A 72 . ? 1_555 ? 5 AC1 16 PHE A 97 ? PHE A 97 . ? 1_555 ? 6 AC1 16 THR A 144 ? THR A 144 . ? 1_555 ? 7 AC1 16 VAL A 146 ? VAL A 146 . ? 1_555 ? 8 AC1 16 THR A 148 ? THR A 148 . ? 1_555 ? 9 AC1 16 ASP A 175 ? ASP A 175 . ? 1_555 ? 10 AC1 16 VAL A 177 ? VAL A 177 . ? 1_555 ? 11 AC1 16 CYS A 178 ? CYS A 178 . ? 1_555 ? 12 AC1 16 GLN A 200 ? GLN A 200 . ? 1_555 ? 13 AC1 16 LYS A 201 ? LYS A 201 . ? 1_555 ? 14 AC1 16 TYR A 255 ? TYR A 255 . ? 4_465 ? 15 AC1 16 THR A 258 ? THR A 258 . ? 4_465 ? 16 AC1 16 GLV C . ? GLV A 1384 . ? 1_555 ? 17 AC2 5 HIS A 31 ? HIS A 31 . ? 4_465 ? 18 AC2 5 THR A 148 ? THR A 148 . ? 1_555 ? 19 AC2 5 TYR A 255 ? TYR A 255 . ? 4_465 ? 20 AC2 5 ARG A 354 ? ARG A 354 . ? 1_555 ? 21 AC2 5 PLP B . ? PLP A 1201 . ? 1_555 ? # _database_PDB_matrix.entry_id 2BKW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2BKW _atom_sites.fract_transf_matrix[1][1] 0.017422 _atom_sites.fract_transf_matrix[1][2] 0.010058 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020117 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005420 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 TRP 72 72 72 TRP TRP A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 HIS 145 145 145 HIS HIS A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 CYS 182 182 182 CYS CYS A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 ASP 188 188 188 ASP ASP A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 TRP 190 190 190 TRP TRP A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 THR 197 197 197 THR THR A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 GLN 200 200 200 GLN GLN A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 CYS 214 214 214 CYS CYS A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 PHE 218 218 218 PHE PHE A . n A 1 219 MSE 219 219 219 MSE MSE A . n A 1 220 ASP 220 220 220 ASP ASP A . n A 1 221 TYR 221 221 221 TYR TYR A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 ASP 225 225 225 ASP ASP A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 ASN 228 228 228 ASN ASN A . n A 1 229 GLY 229 229 229 GLY GLY A . n A 1 230 HIS 230 230 230 HIS HIS A . n A 1 231 VAL 231 231 231 VAL VAL A . n A 1 232 HIS 232 232 232 HIS HIS A . n A 1 233 GLY 233 233 233 GLY GLY A . n A 1 234 TYR 234 234 234 TYR TYR A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 SER 236 236 236 SER SER A . n A 1 237 SER 237 237 237 SER SER A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 ARG 239 239 239 ARG ARG A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 TRP 241 241 241 TRP TRP A . n A 1 242 THR 242 242 242 THR THR A . n A 1 243 PRO 243 243 243 PRO PRO A . n A 1 244 ILE 244 244 244 ILE ILE A . n A 1 245 MSE 245 245 245 MSE MSE A . n A 1 246 GLU 246 246 246 GLU GLU A . n A 1 247 ASN 247 247 247 ASN ASN A . n A 1 248 TYR 248 248 248 TYR TYR A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 GLY 251 251 251 GLY GLY A . n A 1 252 LYS 252 252 252 LYS LYS A . n A 1 253 GLY 253 253 253 GLY GLY A . n A 1 254 ALA 254 254 254 ALA ALA A . n A 1 255 TYR 255 255 255 TYR TYR A . n A 1 256 PHE 256 256 256 PHE PHE A . n A 1 257 ALA 257 257 257 ALA ALA A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 PRO 259 259 259 PRO PRO A . n A 1 260 PRO 260 260 260 PRO PRO A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 ILE 264 264 264 ILE ILE A . n A 1 265 ASN 265 265 265 ASN ASN A . n A 1 266 SER 266 266 266 SER SER A . n A 1 267 LEU 267 267 267 LEU LEU A . n A 1 268 ASP 268 268 268 ASP ASP A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 GLU 273 273 273 GLU GLU A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 GLY 278 278 278 GLY GLY A . n A 1 279 LEU 279 279 279 LEU LEU A . n A 1 280 HIS 280 280 280 HIS HIS A . n A 1 281 LYS 281 281 281 LYS LYS A . n A 1 282 ARG 282 282 282 ARG ARG A . n A 1 283 TRP 283 283 283 TRP TRP A . n A 1 284 ASP 284 284 284 ASP ASP A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 HIS 286 286 286 HIS HIS A . n A 1 287 ARG 287 287 287 ARG ARG A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 MSE 289 289 289 MSE MSE A . n A 1 290 SER 290 290 290 SER SER A . n A 1 291 ASP 291 291 291 ASP ASP A . n A 1 292 TRP 292 292 292 TRP TRP A . n A 1 293 PHE 293 293 293 PHE PHE A . n A 1 294 LYS 294 294 294 LYS LYS A . n A 1 295 ASP 295 295 295 ASP ASP A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 VAL 298 298 298 VAL VAL A . n A 1 299 ASN 299 299 299 ASN ASN A . n A 1 300 GLY 300 300 300 GLY GLY A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLN 302 302 302 GLN GLN A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 SER 305 305 305 SER SER A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 ARG 308 308 308 ARG ARG A . n A 1 309 TYR 309 309 309 TYR TYR A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 ASN 312 312 312 ASN ASN A . n A 1 313 MSE 313 313 313 MSE MSE A . n A 1 314 SER 314 314 314 SER SER A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 HIS 316 316 316 HIS HIS A . n A 1 317 GLY 317 317 317 GLY GLY A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 THR 319 319 319 THR THR A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 VAL 321 321 321 VAL VAL A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 VAL 323 323 323 VAL VAL A . n A 1 324 ALA 324 324 324 ALA ALA A . n A 1 325 ASP 325 325 325 ASP ASP A . n A 1 326 PRO 326 326 326 PRO PRO A . n A 1 327 PRO 327 327 327 PRO PRO A . n A 1 328 ASP 328 328 328 ASP ASP A . n A 1 329 VAL 329 329 329 VAL VAL A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 ALA 331 331 331 ALA ALA A . n A 1 332 PHE 332 332 332 PHE PHE A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 LYS 334 334 334 LYS LYS A . n A 1 335 SER 335 335 335 SER SER A . n A 1 336 HIS 336 336 336 HIS HIS A . n A 1 337 GLY 337 337 337 GLY GLY A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 VAL 339 339 339 VAL VAL A . n A 1 340 ILE 340 340 340 ILE ILE A . n A 1 341 ALA 341 341 341 ALA ALA A . n A 1 342 GLY 342 342 342 GLY GLY A . n A 1 343 GLY 343 343 343 GLY GLY A . n A 1 344 ILE 344 344 344 ILE ILE A . n A 1 345 HIS 345 345 345 HIS HIS A . n A 1 346 LYS 346 346 346 LYS LYS A . n A 1 347 ASP 347 347 347 ASP ASP A . n A 1 348 ILE 348 348 348 ILE ILE A . n A 1 349 GLY 349 349 349 GLY GLY A . n A 1 350 PRO 350 350 350 PRO PRO A . n A 1 351 LYS 351 351 351 LYS LYS A . n A 1 352 TYR 352 352 352 TYR TYR A . n A 1 353 ILE 353 353 353 ILE ILE A . n A 1 354 ARG 354 354 354 ARG ARG A . n A 1 355 ILE 355 355 355 ILE ILE A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 HIS 357 357 357 HIS HIS A . n A 1 358 MSE 358 358 358 MSE MSE A . n A 1 359 GLY 359 359 359 GLY GLY A . n A 1 360 VAL 360 360 360 VAL VAL A . n A 1 361 THR 361 361 361 THR THR A . n A 1 362 ALA 362 362 362 ALA ALA A . n A 1 363 CYS 363 363 363 CYS CYS A . n A 1 364 ASN 364 364 364 ASN ASN A . n A 1 365 LYS 365 365 365 LYS LYS A . n A 1 366 ASN 366 366 366 ASN ASN A . n A 1 367 LEU 367 367 367 LEU LEU A . n A 1 368 PRO 368 368 368 PRO PRO A . n A 1 369 TYR 369 369 369 TYR TYR A . n A 1 370 MSE 370 370 370 MSE MSE A . n A 1 371 LYS 371 371 371 LYS LYS A . n A 1 372 ASN 372 372 372 ASN ASN A . n A 1 373 CYS 373 373 373 CYS CYS A . n A 1 374 PHE 374 374 374 PHE PHE A . n A 1 375 ASP 375 375 375 ASP ASP A . n A 1 376 LEU 376 376 376 LEU LEU A . n A 1 377 ILE 377 377 377 ILE ILE A . n A 1 378 LYS 378 378 378 LYS LYS A . n A 1 379 LEU 379 379 379 LEU LEU A . n A 1 380 ALA 380 380 380 ALA ALA A . n A 1 381 LEU 381 381 381 LEU LEU A . n A 1 382 GLN 382 382 382 GLN GLN A . n A 1 383 ARG 383 383 383 ARG ARG A . n A 1 384 LYS 384 384 384 LYS LYS A . n A 1 385 LYS 385 385 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLP 1 1201 1201 PLP PLP A . C 3 GLV 1 1384 1384 GLV GLV A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 219 A MSE 219 ? MET SELENOMETHIONINE 2 A MSE 245 A MSE 245 ? MET SELENOMETHIONINE 3 A MSE 289 A MSE 289 ? MET SELENOMETHIONINE 4 A MSE 313 A MSE 313 ? MET SELENOMETHIONINE 5 A MSE 358 A MSE 358 ? MET SELENOMETHIONINE 6 A MSE 370 A MSE 370 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5970 ? 1 MORE -21.4 ? 1 'SSA (A^2)' 25370 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_465 y-1,x+1,-z -0.5000000000 0.8660254038 0.0000000000 -86.1000000000 0.8660254038 0.5000000000 0.0000000000 49.7098581772 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2016 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-02 2 'Structure model' 1 1 2015-11-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' Other 6 2 'Structure model' 'Refinement description' 7 2 'Structure model' 'Source and taxonomy' 8 2 'Structure model' 'Structure summary' 9 2 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data reduction' . ? 1 CCP4 'data scaling' . ? 2 CNS phasing . ? 3 RESOLVE phasing . ? 4 CNS refinement 1.1 ? 5 # _pdbx_entry_details.entry_id 2BKW _pdbx_entry_details.compound_details 'FUNCTION: ALLOWS THE BIOSYNTHESIS OF GLYCINE' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 343 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 352 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 52 ? ? 72.64 47.58 2 1 GLN A 135 ? ? -59.54 -8.74 3 1 SER A 167 ? ? -158.22 68.31 4 1 LYS A 201 ? ? -92.79 -138.87 5 1 TYR A 234 ? ? -152.87 -67.67 6 1 PHE A 256 ? ? -123.20 -58.53 7 1 SER A 311 ? ? 178.39 163.08 8 1 ILE A 344 ? ? 38.73 73.42 9 1 ASN A 364 ? ? 58.86 80.99 10 1 LYS A 365 ? ? -74.24 31.43 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 384 ? CA ? A LYS 384 CA 2 1 Y 1 A LYS 384 ? C ? A LYS 384 C 3 1 Y 1 A LYS 384 ? O ? A LYS 384 O 4 1 Y 1 A LYS 384 ? CB ? A LYS 384 CB 5 1 Y 1 A LYS 384 ? CG ? A LYS 384 CG 6 1 Y 1 A LYS 384 ? CD ? A LYS 384 CD 7 1 Y 1 A LYS 384 ? CE ? A LYS 384 CE 8 1 Y 1 A LYS 384 ? NZ ? A LYS 384 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A LYS 385 ? A LYS 385 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "PYRIDOXAL-5'-PHOSPHATE" PLP 3 'GLYOXYLIC ACID' GLV 4 water HOH #