data_2BRD # _entry.id 2BRD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2BRD pdb_00002brd 10.2210/pdb2brd/pdb WWPDB D_1000177875 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-06-10 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-05-30 5 'Structure model' 2 0 2024-06-05 6 'Structure model' 2 1 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Experimental preparation' 5 5 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Polymer sequence' 11 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' diffrn_radiation 5 5 'Structure model' em_image_scans 6 5 'Structure model' em_single_particle_entity 7 5 'Structure model' entity_poly 8 5 'Structure model' pdbx_database_status 9 5 'Structure model' struct_conn 10 5 'Structure model' struct_site 11 6 'Structure model' pdbx_entry_details 12 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_diffrn_radiation.pdbx_scattering_type' 4 5 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 5 5 'Structure model' '_pdbx_database_status.process_site' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 20 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 21 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2BRD _pdbx_database_status.recvd_initial_deposition_date 1995-12-27 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Henderson, R.' 1 'Grigorieff, N.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Electron-crystallographic refinement of the structure of bacteriorhodopsin.' J.Mol.Biol. 259 393 421 1996 JMOBAK UK 0022-2836 0070 ? 8676377 10.1006/jmbi.1996.0328 1 'Analysis of High-Resolution Electron Diffraction Patterns from Purple Membrane Labelled with Heavy-Atoms' J.Mol.Biol. 213 539 ? 1990 JMOBAK UK 0022-2836 0070 ? ? ? 2 'Model for the Structure of Bacteriorhodopsin Based on High-Resolution Electron Cryo-Microscopy' J.Mol.Biol. 213 899 ? 1990 JMOBAK UK 0022-2836 0070 ? ? ? 3 'Three-Dimensional Model of Purple Membrane Obtained by Electron Microscopy' Nature 257 28 ? 1975 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Grigorieff, N.' 1 ? primary 'Ceska, T.A.' 2 ? primary 'Downing, K.H.' 3 ? primary 'Baldwin, J.M.' 4 ? primary 'Henderson, R.' 5 ? 1 'Ceska, T.A.' 6 ? 1 'Henderson, R.' 7 ? 2 'Henderson, R.' 8 ? 2 'Baldwin, J.M.' 9 ? 2 'Ceska, T.A.' 10 ? 2 'Zemlin, F.' 11 ? 2 'Beckmann, E.' 12 ? 2 'Downing, K.H.' 13 ? 3 'Henderson, R.' 14 ? 3 'Unwin, P.N.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man BACTERIORHODOPSIN 26797.381 1 ? ? ? ? 2 non-polymer syn 'PHOSPHORIC ACID 2,3-BIS-(3,7,11,15-TETRAMETHYL-HEXADECYLOXY)-PROPYL ESTER 2-HYDROXO-3-PHOSPHONOOXY-PROPYL ESTER' 887.195 10 ? ? ? ? 3 non-polymer syn RETINAL 284.436 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(PCA)AQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQN PIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGF TSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAP EPSAGDGAAATS ; _entity_poly.pdbx_seq_one_letter_code_can ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHORIC ACID 2,3-BIS-(3,7,11,15-TETRAMETHYL-HEXADECYLOXY)-PROPYL ESTER 2-HYDROXO-3-PHOSPHONOOXY-PROPYL ESTER' DPG 3 RETINAL RET # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 ALA n 1 3 GLN n 1 4 ILE n 1 5 THR n 1 6 GLY n 1 7 ARG n 1 8 PRO n 1 9 GLU n 1 10 TRP n 1 11 ILE n 1 12 TRP n 1 13 LEU n 1 14 ALA n 1 15 LEU n 1 16 GLY n 1 17 THR n 1 18 ALA n 1 19 LEU n 1 20 MET n 1 21 GLY n 1 22 LEU n 1 23 GLY n 1 24 THR n 1 25 LEU n 1 26 TYR n 1 27 PHE n 1 28 LEU n 1 29 VAL n 1 30 LYS n 1 31 GLY n 1 32 MET n 1 33 GLY n 1 34 VAL n 1 35 SER n 1 36 ASP n 1 37 PRO n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 LYS n 1 42 PHE n 1 43 TYR n 1 44 ALA n 1 45 ILE n 1 46 THR n 1 47 THR n 1 48 LEU n 1 49 VAL n 1 50 PRO n 1 51 ALA n 1 52 ILE n 1 53 ALA n 1 54 PHE n 1 55 THR n 1 56 MET n 1 57 TYR n 1 58 LEU n 1 59 SER n 1 60 MET n 1 61 LEU n 1 62 LEU n 1 63 GLY n 1 64 TYR n 1 65 GLY n 1 66 LEU n 1 67 THR n 1 68 MET n 1 69 VAL n 1 70 PRO n 1 71 PHE n 1 72 GLY n 1 73 GLY n 1 74 GLU n 1 75 GLN n 1 76 ASN n 1 77 PRO n 1 78 ILE n 1 79 TYR n 1 80 TRP n 1 81 ALA n 1 82 ARG n 1 83 TYR n 1 84 ALA n 1 85 ASP n 1 86 TRP n 1 87 LEU n 1 88 PHE n 1 89 THR n 1 90 THR n 1 91 PRO n 1 92 LEU n 1 93 LEU n 1 94 LEU n 1 95 LEU n 1 96 ASP n 1 97 LEU n 1 98 ALA n 1 99 LEU n 1 100 LEU n 1 101 VAL n 1 102 ASP n 1 103 ALA n 1 104 ASP n 1 105 GLN n 1 106 GLY n 1 107 THR n 1 108 ILE n 1 109 LEU n 1 110 ALA n 1 111 LEU n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 ASP n 1 116 GLY n 1 117 ILE n 1 118 MET n 1 119 ILE n 1 120 GLY n 1 121 THR n 1 122 GLY n 1 123 LEU n 1 124 VAL n 1 125 GLY n 1 126 ALA n 1 127 LEU n 1 128 THR n 1 129 LYS n 1 130 VAL n 1 131 TYR n 1 132 SER n 1 133 TYR n 1 134 ARG n 1 135 PHE n 1 136 VAL n 1 137 TRP n 1 138 TRP n 1 139 ALA n 1 140 ILE n 1 141 SER n 1 142 THR n 1 143 ALA n 1 144 ALA n 1 145 MET n 1 146 LEU n 1 147 TYR n 1 148 ILE n 1 149 LEU n 1 150 TYR n 1 151 VAL n 1 152 LEU n 1 153 PHE n 1 154 PHE n 1 155 GLY n 1 156 PHE n 1 157 THR n 1 158 SER n 1 159 LYS n 1 160 ALA n 1 161 GLU n 1 162 SER n 1 163 MET n 1 164 ARG n 1 165 PRO n 1 166 GLU n 1 167 VAL n 1 168 ALA n 1 169 SER n 1 170 THR n 1 171 PHE n 1 172 LYS n 1 173 VAL n 1 174 LEU n 1 175 ARG n 1 176 ASN n 1 177 VAL n 1 178 THR n 1 179 VAL n 1 180 VAL n 1 181 LEU n 1 182 TRP n 1 183 SER n 1 184 ALA n 1 185 TYR n 1 186 PRO n 1 187 VAL n 1 188 VAL n 1 189 TRP n 1 190 LEU n 1 191 ILE n 1 192 GLY n 1 193 SER n 1 194 GLU n 1 195 GLY n 1 196 ALA n 1 197 GLY n 1 198 ILE n 1 199 VAL n 1 200 PRO n 1 201 LEU n 1 202 ASN n 1 203 ILE n 1 204 GLU n 1 205 THR n 1 206 LEU n 1 207 LEU n 1 208 PHE n 1 209 MET n 1 210 VAL n 1 211 LEU n 1 212 ASP n 1 213 VAL n 1 214 SER n 1 215 ALA n 1 216 LYS n 1 217 VAL n 1 218 GLY n 1 219 PHE n 1 220 GLY n 1 221 LEU n 1 222 ILE n 1 223 LEU n 1 224 LEU n 1 225 ARG n 1 226 SER n 1 227 ARG n 1 228 ALA n 1 229 ILE n 1 230 PHE n 1 231 GLY n 1 232 GLU n 1 233 ALA n 1 234 GLU n 1 235 ALA n 1 236 PRO n 1 237 GLU n 1 238 PRO n 1 239 SER n 1 240 ALA n 1 241 GLY n 1 242 ASP n 1 243 GLY n 1 244 ALA n 1 245 ALA n 1 246 ALA n 1 247 THR n 1 248 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Halobacterium _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain R1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Halobacterium salinarum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2242 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DPG non-polymer . 'PHOSPHORIC ACID 2,3-BIS-(3,7,11,15-TETRAMETHYL-HEXADECYLOXY)-PROPYL ESTER 2-HYDROXO-3-PHOSPHONOOXY-PROPYL ESTER' DPHPG 'C46 H96 O11 P2' 887.195 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLN 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 TRP 12 12 12 TRP TRP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 TRP 137 137 137 TRP TRP A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 MET 163 163 163 MET MET A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 TYR 185 185 185 TYR TYR A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 MET 209 209 209 MET MET A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 ILE 229 229 ? ? ? A . n A 1 230 PHE 230 230 ? ? ? A . n A 1 231 GLY 231 231 ? ? ? A . n A 1 232 GLU 232 232 ? ? ? A . n A 1 233 ALA 233 233 ? ? ? A . n A 1 234 GLU 234 234 ? ? ? A . n A 1 235 ALA 235 235 ? ? ? A . n A 1 236 PRO 236 236 ? ? ? A . n A 1 237 GLU 237 237 ? ? ? A . n A 1 238 PRO 238 238 ? ? ? A . n A 1 239 SER 239 239 ? ? ? A . n A 1 240 ALA 240 240 ? ? ? A . n A 1 241 GLY 241 241 ? ? ? A . n A 1 242 ASP 242 242 ? ? ? A . n A 1 243 GLY 243 243 ? ? ? A . n A 1 244 ALA 244 244 ? ? ? A . n A 1 245 ALA 245 245 ? ? ? A . n A 1 246 ALA 246 246 ? ? ? A . n A 1 247 THR 247 247 ? ? ? A . n A 1 248 SER 248 248 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DPG 1 261 261 DPG DPG A . C 2 DPG 1 262 262 DPG DPG A . D 2 DPG 1 263 263 DPG DPG A . E 2 DPG 1 264 264 DPG DPG A . F 2 DPG 1 265 265 DPG DPG A . G 2 DPG 1 266 266 DPG DPG A . H 2 DPG 1 267 267 DPG DPG A . I 2 DPG 1 268 268 DPG DPG A . J 2 DPG 1 269 269 DPG DPG A . K 2 DPG 1 270 270 DPG DPG A . L 3 RET 1 271 216 RET RET A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ALA 228 ? CA ? A ALA 228 CA 2 1 Y 1 A ALA 228 ? C ? A ALA 228 C 3 1 Y 1 A ALA 228 ? O ? A ALA 228 O 4 1 Y 1 A ALA 228 ? CB ? A ALA 228 CB # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PROLSQ refinement . ? 1 PICKYCOR 'data reduction' . ? 2 AN 'data reduction' 'MRC ELECTRON DIFFRACTION PROGRAM' ? 3 # _cell.entry_id 2BRD _cell.length_a 62.450 _cell.length_b 62.450 _cell.length_c 100.900 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BRD _symmetry.space_group_name_H-M 'P 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 # _exptl.entry_id 2BRD _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.24 _exptl_crystal.density_percent_sol 70.97 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector FILM _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1986-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type electron # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.033 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 0.033 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2BRD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 54.0 _reflns.d_resolution_high 2.8 _reflns.number_obs 6750 _reflns.number_all ? _reflns.percent_possible_obs 62.3 _reflns.pdbx_Rmerge_I_obs 0.1500000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 18. _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 2BRD _refine.ls_number_reflns_obs 4743 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30. _refine.ls_d_res_high 3.5 _refine.ls_percent_reflns_obs 85.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2800000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 114. _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1718 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 610 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2328 _refine_hist.d_res_high 3.5 _refine_hist.d_res_low 30. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.005 0.020 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_angle_d 0.020 0.040 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_angle_deg ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_planar_d 0.022 0.050 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_hb_or_metal_coord ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_mcbond_it ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_mcangle_it ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_scbond_it ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_scangle_it ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_plane_restr 0.005 0.020 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_chiral_restr 0.086 0.150 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_singtor_nbd 0.185 0.300 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_multtor_nbd 0.242 0.300 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_xhyhbond_nbd ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_xyhbond_nbd 0.127 0.300 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_planar_tor 0.865 ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_staggered_tor 20.4 15.0 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_orthonormal_tor ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_transverse_tor 36.1 20.0 ? ? 'ELECTRON CRYSTALLOGRAPHY' ? p_special_tor ? ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? # _database_PDB_matrix.entry_id 2BRD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2BRD _struct.title 'CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN PURPLE MEMBRANE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2BRD _struct_keywords.pdbx_keywords PHOTORECEPTOR _struct_keywords.text 'PROTON PUMP, MEMBRANE PROTEIN, RETINAL PROTEIN, TWO-DIMENSIONAL CRYSTAL, PHOTORECEPTOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACR_HALN1 _struct_ref.pdbx_db_accession P02945 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 14 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2BRD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 248 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02945 _struct_ref_seq.db_align_beg 14 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 253 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 248 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 34840 ? 1 MORE -277 ? 1 'SSA (A^2)' 35800 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A GLU A 9 ? GLY A 31 ? GLU A 9 GLY A 31 1 ? 23 HELX_P HELX_P2 B ASP A 38 ? LEU A 62 ? ASP A 38 LEU A 62 1 ? 25 HELX_P HELX_P3 C PRO A 77 ? LEU A 100 ? PRO A 77 LEU A 100 1 ? 24 HELX_P HELX_P4 D GLN A 105 ? LEU A 127 ? GLN A 105 LEU A 127 1 ? 23 HELX_P HELX_P5 E ARG A 134 ? THR A 157 ? ARG A 134 THR A 157 1 ? 24 HELX_P HELX_P6 F GLU A 166 ? ILE A 191 ? GLU A 166 ILE A 191 1 ? 26 HELX_P HELX_P7 G ILE A 203 ? SER A 226 ? ILE A 203 SER A 226 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id L _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 216 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 271 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.312 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id RET _pdbx_modification_feature.label_asym_id L _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id LYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 216 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id RET _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 271 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id LYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 216 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C15 _pdbx_modification_feature.modified_residue_id_linking_atom NZ _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id RET _pdbx_modification_feature.type Retinoylation _pdbx_modification_feature.category Lipid/lipid-like # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DPG 261 ? 13 'BINDING SITE FOR RESIDUE DPG A 261' AC2 Software A DPG 262 ? 12 'BINDING SITE FOR RESIDUE DPG A 262' AC3 Software A DPG 263 ? 11 'BINDING SITE FOR RESIDUE DPG A 263' AC4 Software A DPG 264 ? 8 'BINDING SITE FOR RESIDUE DPG A 264' AC5 Software A DPG 265 ? 5 'BINDING SITE FOR RESIDUE DPG A 265' AC6 Software A DPG 266 ? 15 'BINDING SITE FOR RESIDUE DPG A 266' AC7 Software A DPG 267 ? 10 'BINDING SITE FOR RESIDUE DPG A 267' AC8 Software A DPG 268 ? 18 'BINDING SITE FOR RESIDUE DPG A 268' AC9 Software A DPG 269 ? 10 'BINDING SITE FOR RESIDUE DPG A 269' BC1 Software A DPG 270 ? 10 'BINDING SITE FOR RESIDUE DPG A 270' BC2 Software A RET 271 ? 11 'BINDING SITE FOR RESIDUE RET A 271' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 TYR A 64 ? TYR A 64 . ? 2_555 ? 2 AC1 13 LEU A 66 ? LEU A 66 . ? 2_555 ? 3 AC1 13 LEU A 66 ? LEU A 66 . ? 1_555 ? 4 AC1 13 MET A 68 ? MET A 68 . ? 1_555 ? 5 AC1 13 PRO A 70 ? PRO A 70 . ? 1_555 ? 6 AC1 13 TRP A 80 ? TRP A 80 . ? 1_555 ? 7 AC1 13 LEU A 87 ? LEU A 87 . ? 1_555 ? 8 AC1 13 PHE A 88 ? PHE A 88 . ? 2_555 ? 9 AC1 13 PHE A 88 ? PHE A 88 . ? 1_555 ? 10 AC1 13 VAL A 124 ? VAL A 124 . ? 1_555 ? 11 AC1 13 LYS A 129 ? LYS A 129 . ? 1_555 ? 12 AC1 13 DPG G . ? DPG A 266 . ? 2_555 ? 13 AC1 13 DPG G . ? DPG A 266 . ? 1_555 ? 14 AC2 12 SER A 183 ? SER A 183 . ? 2_655 ? 15 AC2 12 VAL A 187 ? VAL A 187 . ? 1_555 ? 16 AC2 12 ILE A 191 ? ILE A 191 . ? 1_555 ? 17 AC2 12 ILE A 191 ? ILE A 191 . ? 2_655 ? 18 AC2 12 ALA A 196 ? ALA A 196 . ? 2_655 ? 19 AC2 12 ILE A 198 ? ILE A 198 . ? 1_555 ? 20 AC2 12 ILE A 198 ? ILE A 198 . ? 2_655 ? 21 AC2 12 LEU A 207 ? LEU A 207 . ? 1_555 ? 22 AC2 12 DPG D . ? DPG A 263 . ? 1_555 ? 23 AC2 12 DPG H . ? DPG A 267 . ? 3_665 ? 24 AC2 12 DPG H . ? DPG A 267 . ? 1_555 ? 25 AC2 12 DPG I . ? DPG A 268 . ? 1_555 ? 26 AC3 11 TRP A 12 ? TRP A 12 . ? 1_555 ? 27 AC3 11 PHE A 135 ? PHE A 135 . ? 2_655 ? 28 AC3 11 TRP A 138 ? TRP A 138 . ? 2_655 ? 29 AC3 11 ALA A 196 ? ALA A 196 . ? 2_655 ? 30 AC3 11 ILE A 203 ? ILE A 203 . ? 1_555 ? 31 AC3 11 LEU A 206 ? LEU A 206 . ? 1_555 ? 32 AC3 11 VAL A 210 ? VAL A 210 . ? 1_555 ? 33 AC3 11 DPG C . ? DPG A 262 . ? 1_555 ? 34 AC3 11 DPG E . ? DPG A 264 . ? 1_555 ? 35 AC3 11 DPG F . ? DPG A 265 . ? 1_555 ? 36 AC3 11 DPG I . ? DPG A 268 . ? 1_555 ? 37 AC4 8 ALA A 18 ? ALA A 18 . ? 3_655 ? 38 AC4 8 PHE A 54 ? PHE A 54 . ? 3_655 ? 39 AC4 8 LEU A 58 ? LEU A 58 . ? 3_655 ? 40 AC4 8 LEU A 61 ? LEU A 61 . ? 3_655 ? 41 AC4 8 VAL A 136 ? VAL A 136 . ? 2_655 ? 42 AC4 8 DPG D . ? DPG A 263 . ? 1_555 ? 43 AC4 8 DPG F . ? DPG A 265 . ? 1_555 ? 44 AC4 8 DPG K . ? DPG A 270 . ? 3_655 ? 45 AC5 5 ILE A 11 ? ILE A 11 . ? 1_555 ? 46 AC5 5 LEU A 15 ? LEU A 15 . ? 1_555 ? 47 AC5 5 ALA A 18 ? ALA A 18 . ? 1_555 ? 48 AC5 5 DPG D . ? DPG A 263 . ? 1_555 ? 49 AC5 5 DPG E . ? DPG A 264 . ? 1_555 ? 50 AC6 15 ILE A 52 ? ILE A 52 . ? 2_555 ? 51 AC6 15 PHE A 88 ? PHE A 88 . ? 1_555 ? 52 AC6 15 PHE A 88 ? PHE A 88 . ? 2_555 ? 53 AC6 15 LEU A 92 ? LEU A 92 . ? 2_555 ? 54 AC6 15 LEU A 95 ? LEU A 95 . ? 1_555 ? 55 AC6 15 LEU A 99 ? LEU A 99 . ? 2_555 ? 56 AC6 15 ALA A 103 ? ALA A 103 . ? 2_555 ? 57 AC6 15 GLN A 105 ? GLN A 105 . ? 1_555 ? 58 AC6 15 GLN A 105 ? GLN A 105 . ? 3_555 ? 59 AC6 15 ILE A 108 ? ILE A 108 . ? 1_555 ? 60 AC6 15 LEU A 109 ? LEU A 109 . ? 3_555 ? 61 AC6 15 GLY A 116 ? GLY A 116 . ? 1_555 ? 62 AC6 15 ILE A 117 ? ILE A 117 . ? 1_555 ? 63 AC6 15 DPG B . ? DPG A 261 . ? 3_555 ? 64 AC6 15 DPG B . ? DPG A 261 . ? 1_555 ? 65 AC7 10 PHE A 156 ? PHE A 156 . ? 1_555 ? 66 AC7 10 LYS A 172 ? LYS A 172 . ? 1_555 ? 67 AC7 10 ARG A 175 ? ARG A 175 . ? 1_555 ? 68 AC7 10 ASN A 176 ? ASN A 176 . ? 1_555 ? 69 AC7 10 VAL A 180 ? VAL A 180 . ? 1_555 ? 70 AC7 10 ALA A 184 ? ALA A 184 . ? 1_555 ? 71 AC7 10 VAL A 187 ? VAL A 187 . ? 1_555 ? 72 AC7 10 DPG C . ? DPG A 262 . ? 1_555 ? 73 AC7 10 DPG C . ? DPG A 262 . ? 2_655 ? 74 AC7 10 DPG I . ? DPG A 268 . ? 1_555 ? 75 AC8 18 TRP A 138 ? TRP A 138 . ? 2_655 ? 76 AC8 18 THR A 142 ? THR A 142 . ? 2_655 ? 77 AC8 18 MET A 145 ? MET A 145 . ? 2_655 ? 78 AC8 18 LEU A 149 ? LEU A 149 . ? 2_655 ? 79 AC8 18 TYR A 150 ? TYR A 150 . ? 2_655 ? 80 AC8 18 PHE A 153 ? PHE A 153 . ? 2_655 ? 81 AC8 18 THR A 157 ? THR A 157 . ? 2_655 ? 82 AC8 18 SER A 169 ? SER A 169 . ? 1_555 ? 83 AC8 18 LYS A 172 ? LYS A 172 . ? 1_555 ? 84 AC8 18 VAL A 173 ? VAL A 173 . ? 1_555 ? 85 AC8 18 VAL A 179 ? VAL A 179 . ? 2_655 ? 86 AC8 18 PRO A 186 ? PRO A 186 . ? 2_655 ? 87 AC8 18 VAL A 210 ? VAL A 210 . ? 1_555 ? 88 AC8 18 SER A 214 ? SER A 214 . ? 1_555 ? 89 AC8 18 ARG A 225 ? ARG A 225 . ? 1_555 ? 90 AC8 18 DPG C . ? DPG A 262 . ? 1_555 ? 91 AC8 18 DPG D . ? DPG A 263 . ? 1_555 ? 92 AC8 18 DPG H . ? DPG A 267 . ? 1_555 ? 93 AC9 10 LEU A 28 ? LEU A 28 . ? 1_555 ? 94 AC9 10 MET A 32 ? MET A 32 . ? 1_555 ? 95 AC9 10 GLY A 33 ? GLY A 33 . ? 1_555 ? 96 AC9 10 LYS A 40 ? LYS A 40 . ? 1_555 ? 97 AC9 10 THR A 47 ? THR A 47 . ? 1_555 ? 98 AC9 10 ALA A 51 ? ALA A 51 . ? 1_555 ? 99 AC9 10 TYR A 147 ? TYR A 147 . ? 3_555 ? 100 AC9 10 PHE A 154 ? PHE A 154 . ? 3_555 ? 101 AC9 10 LEU A 221 ? LEU A 221 . ? 2_545 ? 102 AC9 10 DPG K . ? DPG A 270 . ? 3_655 ? 103 BC1 10 LEU A 22 ? LEU A 22 . ? 1_555 ? 104 BC1 10 TYR A 26 ? TYR A 26 . ? 2_545 ? 105 BC1 10 VAL A 29 ? VAL A 29 . ? 1_555 ? 106 BC1 10 VAL A 29 ? VAL A 29 . ? 2_545 ? 107 BC1 10 LYS A 30 ? LYS A 30 . ? 2_545 ? 108 BC1 10 GLY A 33 ? GLY A 33 . ? 2_545 ? 109 BC1 10 LEU A 224 ? LEU A 224 . ? 2_545 ? 110 BC1 10 ARG A 227 ? ARG A 227 . ? 2_545 ? 111 BC1 10 DPG E . ? DPG A 264 . ? 2_545 ? 112 BC1 10 DPG J . ? DPG A 269 . ? 2_545 ? 113 BC2 11 TRP A 86 ? TRP A 86 . ? 1_555 ? 114 BC2 11 THR A 89 ? THR A 89 . ? 1_555 ? 115 BC2 11 THR A 90 ? THR A 90 . ? 1_555 ? 116 BC2 11 MET A 118 ? MET A 118 . ? 1_555 ? 117 BC2 11 TRP A 138 ? TRP A 138 . ? 1_555 ? 118 BC2 11 SER A 141 ? SER A 141 . ? 1_555 ? 119 BC2 11 TRP A 182 ? TRP A 182 . ? 1_555 ? 120 BC2 11 TYR A 185 ? TYR A 185 . ? 1_555 ? 121 BC2 11 TRP A 189 ? TRP A 189 . ? 1_555 ? 122 BC2 11 ASP A 212 ? ASP A 212 . ? 1_555 ? 123 BC2 11 LYS A 216 ? LYS A 216 . ? 1_555 ? # _pdbx_entry_details.entry_id 2BRD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A TRP 80 ? ? CB A TRP 80 ? ? CG A TRP 80 ? ? 127.94 113.70 14.24 1.90 N 2 1 CA A TYR 133 ? ? CB A TYR 133 ? ? CG A TYR 133 ? ? 128.00 113.40 14.60 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 9 ? ? -26.45 -41.19 2 1 MET A 32 ? ? -10.24 -89.28 3 1 ASP A 36 ? ? -132.17 -62.59 4 1 PRO A 37 ? ? -90.23 -118.09 5 1 THR A 67 ? ? -116.15 73.11 6 1 PHE A 71 ? ? -171.60 92.89 7 1 GLN A 75 ? ? -53.88 176.05 8 1 THR A 89 ? ? -42.50 -72.87 9 1 VAL A 101 ? ? -104.11 -89.22 10 1 TYR A 133 ? ? -173.72 -0.23 11 1 ALA A 160 ? ? 42.32 -141.06 12 1 GLU A 161 ? ? -45.90 107.85 13 1 MET A 163 ? ? -99.74 -117.98 14 1 TYR A 185 ? ? -42.16 -71.49 15 1 SER A 193 ? ? 12.74 -101.25 16 1 PRO A 200 ? ? -48.56 -91.57 17 1 LEU A 201 ? ? -154.37 -56.54 18 1 ASP A 212 ? ? -44.01 -73.64 19 1 ARG A 227 ? ? -64.77 99.21 # _em_3d_reconstruction.entry_id 2BRD _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type '2D CRYSTAL' _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_particles . _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.resolution ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_entity_assembly.id 1 _em_entity_assembly.name 'BACTERIORHODOPSIN CRYSTAL' _em_entity_assembly.type COMPLEX _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.entity_id_list ? _em_entity_assembly.source ? _em_entity_assembly.oligomeric_details ? # loop_ _em_imaging.entry_id _em_imaging.id _em_imaging.specimen_id _em_imaging.accelerating_voltage _em_imaging.electron_source _em_imaging.illumination_mode _em_imaging.mode _em_imaging.microscope_model _em_imaging.calibrated_defocus_max _em_imaging.alignment_procedure _em_imaging.c2_aperture_diameter _em_imaging.calibrated_defocus_min _em_imaging.calibrated_magnification _em_imaging.cryogen _em_imaging.details _em_imaging.nominal_cs _em_imaging.nominal_defocus_max _em_imaging.nominal_defocus_min _em_imaging.nominal_magnification _em_imaging.residual_tilt _em_imaging.specimen_holder_model _em_imaging.recording_temperature_maximum _em_imaging.recording_temperature_minimum _em_imaging.citation_id _em_imaging.date _em_imaging.temperature _em_imaging.tilt_angle_min _em_imaging.tilt_angle_max _em_imaging.astigmatism _em_imaging.detector_distance _em_imaging.electron_beam_tilt_params _em_imaging.specimen_holder_type 2BRD 1 1 120 ? 'FLOOD BEAM' DIFFRACTION 'FEI/PHILIPS EM420' ? ? ? ? ? ? '60 degree tilted specimens' ? ? ? ? ? ? 153 ? ? ? ? ? ? ? ? ? ? 2BRD 2 1 100 ? 'FLOOD BEAM' 'BRIGHT FIELD' 'SIEMENS SULEIKA' ? ? ? ? ? HELIUM '0, 20, 45 degree + random degree tilts' ? ? ? 66000 ? ? 5 ? ? ? ? ? ? ? ? ? ? 2BRD 3 1 100 'FIELD EMISSION GUN' 'SPOT SCAN' 'BRIGHT FIELD' 'JEOL 100B' ? ? ? ? ? NITROGEN ', 20, 45 degree + random degree tilts' ? ? ? 55000 ? ? 158 ? ? ? ? ? ? ? ? ? ? # _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entry_id 2BRD _em_experiment.id 1 _em_experiment.aggregation_state '2D ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PCA 1 ? A PCA 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLN 3 ? A GLN 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A ILE 229 ? A ILE 229 8 1 Y 1 A PHE 230 ? A PHE 230 9 1 Y 1 A GLY 231 ? A GLY 231 10 1 Y 1 A GLU 232 ? A GLU 232 11 1 Y 1 A ALA 233 ? A ALA 233 12 1 Y 1 A GLU 234 ? A GLU 234 13 1 Y 1 A ALA 235 ? A ALA 235 14 1 Y 1 A PRO 236 ? A PRO 236 15 1 Y 1 A GLU 237 ? A GLU 237 16 1 Y 1 A PRO 238 ? A PRO 238 17 1 Y 1 A SER 239 ? A SER 239 18 1 Y 1 A ALA 240 ? A ALA 240 19 1 Y 1 A GLY 241 ? A GLY 241 20 1 Y 1 A ASP 242 ? A ASP 242 21 1 Y 1 A GLY 243 ? A GLY 243 22 1 Y 1 A ALA 244 ? A ALA 244 23 1 Y 1 A ALA 245 ? A ALA 245 24 1 Y 1 A ALA 246 ? A ALA 246 25 1 Y 1 A THR 247 ? A THR 247 26 1 Y 1 A SER 248 ? A SER 248 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DPG C1 C N N 74 DPG C2 C N R 75 DPG C3 C N N 76 DPG C4 C N N 77 DPG C5 C N S 78 DPG C6 C N N 79 DPG C11 C N N 80 DPG C12 C N N 81 DPG C13 C N S 82 DPG C14 C N N 83 DPG C15 C N N 84 DPG C16 C N N 85 DPG C17 C N N 86 DPG C18 C N R 87 DPG C19 C N N 88 DPG C20 C N N 89 DPG C21 C N N 90 DPG C22 C N N 91 DPG C23 C N S 92 DPG C24 C N N 93 DPG C25 C N N 94 DPG C26 C N N 95 DPG C27 C N N 96 DPG C28 C N N 97 DPG C29 C N N 98 DPG C30 C N N 99 DPG C41 C N N 100 DPG C42 C N N 101 DPG C43 C N S 102 DPG C44 C N N 103 DPG C45 C N N 104 DPG C46 C N N 105 DPG C47 C N N 106 DPG C48 C N R 107 DPG C49 C N N 108 DPG C50 C N N 109 DPG C51 C N N 110 DPG C52 C N N 111 DPG C53 C N S 112 DPG C54 C N N 113 DPG C55 C N N 114 DPG C56 C N N 115 DPG C57 C N N 116 DPG C58 C N N 117 DPG C59 C N N 118 DPG C60 C N N 119 DPG O1 O N N 120 DPG O2 O N N 121 DPG O3 O N N 122 DPG O4 O N N 123 DPG O5 O N N 124 DPG O6 O N N 125 DPG O7 O N N 126 DPG O8 O N N 127 DPG O9 O N N 128 DPG O10 O N N 129 DPG O11 O N N 130 DPG P1 P N R 131 DPG P2 P N N 132 DPG H11 H N N 133 DPG H12 H N N 134 DPG H2 H N N 135 DPG H31 H N N 136 DPG H32 H N N 137 DPG H41 H N N 138 DPG H42 H N N 139 DPG H5 H N N 140 DPG H61 H N N 141 DPG H62 H N N 142 DPG H111 H N N 143 DPG H112 H N N 144 DPG H121 H N N 145 DPG H122 H N N 146 DPG H13 H N N 147 DPG H141 H N N 148 DPG H142 H N N 149 DPG H143 H N N 150 DPG H151 H N N 151 DPG H152 H N N 152 DPG H161 H N N 153 DPG H162 H N N 154 DPG H171 H N N 155 DPG H172 H N N 156 DPG H18 H N N 157 DPG H191 H N N 158 DPG H192 H N N 159 DPG H193 H N N 160 DPG H201 H N N 161 DPG H202 H N N 162 DPG H211 H N N 163 DPG H212 H N N 164 DPG H221 H N N 165 DPG H222 H N N 166 DPG H23 H N N 167 DPG H241 H N N 168 DPG H242 H N N 169 DPG H243 H N N 170 DPG H251 H N N 171 DPG H252 H N N 172 DPG H261 H N N 173 DPG H262 H N N 174 DPG H271 H N N 175 DPG H272 H N N 176 DPG H28 H N N 177 DPG H291 H N N 178 DPG H292 H N N 179 DPG H293 H N N 180 DPG H301 H N N 181 DPG H302 H N N 182 DPG H303 H N N 183 DPG H411 H N N 184 DPG H412 H N N 185 DPG H421 H N N 186 DPG H422 H N N 187 DPG H43 H N N 188 DPG H441 H N N 189 DPG H442 H N N 190 DPG H443 H N N 191 DPG H451 H N N 192 DPG H452 H N N 193 DPG H461 H N N 194 DPG H462 H N N 195 DPG H471 H N N 196 DPG H472 H N N 197 DPG H48 H N N 198 DPG H491 H N N 199 DPG H492 H N N 200 DPG H493 H N N 201 DPG H501 H N N 202 DPG H502 H N N 203 DPG H511 H N N 204 DPG H512 H N N 205 DPG H521 H N N 206 DPG H522 H N N 207 DPG H53 H N N 208 DPG H541 H N N 209 DPG H542 H N N 210 DPG H543 H N N 211 DPG H551 H N N 212 DPG H552 H N N 213 DPG H561 H N N 214 DPG H562 H N N 215 DPG H571 H N N 216 DPG H572 H N N 217 DPG H58 H N N 218 DPG H591 H N N 219 DPG H592 H N N 220 DPG H593 H N N 221 DPG H601 H N N 222 DPG H602 H N N 223 DPG H603 H N N 224 DPG HO5 H N N 225 DPG HO7 H N N 226 DPG HO0 H N N 227 DPG HO1 H N N 228 GLN N N N N 229 GLN CA C N S 230 GLN C C N N 231 GLN O O N N 232 GLN CB C N N 233 GLN CG C N N 234 GLN CD C N N 235 GLN OE1 O N N 236 GLN NE2 N N N 237 GLN OXT O N N 238 GLN H H N N 239 GLN H2 H N N 240 GLN HA H N N 241 GLN HB2 H N N 242 GLN HB3 H N N 243 GLN HG2 H N N 244 GLN HG3 H N N 245 GLN HE21 H N N 246 GLN HE22 H N N 247 GLN HXT H N N 248 GLU N N N N 249 GLU CA C N S 250 GLU C C N N 251 GLU O O N N 252 GLU CB C N N 253 GLU CG C N N 254 GLU CD C N N 255 GLU OE1 O N N 256 GLU OE2 O N N 257 GLU OXT O N N 258 GLU H H N N 259 GLU H2 H N N 260 GLU HA H N N 261 GLU HB2 H N N 262 GLU HB3 H N N 263 GLU HG2 H N N 264 GLU HG3 H N N 265 GLU HE2 H N N 266 GLU HXT H N N 267 GLY N N N N 268 GLY CA C N N 269 GLY C C N N 270 GLY O O N N 271 GLY OXT O N N 272 GLY H H N N 273 GLY H2 H N N 274 GLY HA2 H N N 275 GLY HA3 H N N 276 GLY HXT H N N 277 ILE N N N N 278 ILE CA C N S 279 ILE C C N N 280 ILE O O N N 281 ILE CB C N S 282 ILE CG1 C N N 283 ILE CG2 C N N 284 ILE CD1 C N N 285 ILE OXT O N N 286 ILE H H N N 287 ILE H2 H N N 288 ILE HA H N N 289 ILE HB H N N 290 ILE HG12 H N N 291 ILE HG13 H N N 292 ILE HG21 H N N 293 ILE HG22 H N N 294 ILE HG23 H N N 295 ILE HD11 H N N 296 ILE HD12 H N N 297 ILE HD13 H N N 298 ILE HXT H N N 299 LEU N N N N 300 LEU CA C N S 301 LEU C C N N 302 LEU O O N N 303 LEU CB C N N 304 LEU CG C N N 305 LEU CD1 C N N 306 LEU CD2 C N N 307 LEU OXT O N N 308 LEU H H N N 309 LEU H2 H N N 310 LEU HA H N N 311 LEU HB2 H N N 312 LEU HB3 H N N 313 LEU HG H N N 314 LEU HD11 H N N 315 LEU HD12 H N N 316 LEU HD13 H N N 317 LEU HD21 H N N 318 LEU HD22 H N N 319 LEU HD23 H N N 320 LEU HXT H N N 321 LYS N N N N 322 LYS CA C N S 323 LYS C C N N 324 LYS O O N N 325 LYS CB C N N 326 LYS CG C N N 327 LYS CD C N N 328 LYS CE C N N 329 LYS NZ N N N 330 LYS OXT O N N 331 LYS H H N N 332 LYS H2 H N N 333 LYS HA H N N 334 LYS HB2 H N N 335 LYS HB3 H N N 336 LYS HG2 H N N 337 LYS HG3 H N N 338 LYS HD2 H N N 339 LYS HD3 H N N 340 LYS HE2 H N N 341 LYS HE3 H N N 342 LYS HZ1 H N N 343 LYS HZ2 H N N 344 LYS HZ3 H N N 345 LYS HXT H N N 346 MET N N N N 347 MET CA C N S 348 MET C C N N 349 MET O O N N 350 MET CB C N N 351 MET CG C N N 352 MET SD S N N 353 MET CE C N N 354 MET OXT O N N 355 MET H H N N 356 MET H2 H N N 357 MET HA H N N 358 MET HB2 H N N 359 MET HB3 H N N 360 MET HG2 H N N 361 MET HG3 H N N 362 MET HE1 H N N 363 MET HE2 H N N 364 MET HE3 H N N 365 MET HXT H N N 366 PCA N N N N 367 PCA CA C N S 368 PCA CB C N N 369 PCA CG C N N 370 PCA CD C N N 371 PCA OE O N N 372 PCA C C N N 373 PCA O O N N 374 PCA OXT O N N 375 PCA H H N N 376 PCA HA H N N 377 PCA HB2 H N N 378 PCA HB3 H N N 379 PCA HG2 H N N 380 PCA HG3 H N N 381 PCA HXT H N N 382 PHE N N N N 383 PHE CA C N S 384 PHE C C N N 385 PHE O O N N 386 PHE CB C N N 387 PHE CG C Y N 388 PHE CD1 C Y N 389 PHE CD2 C Y N 390 PHE CE1 C Y N 391 PHE CE2 C Y N 392 PHE CZ C Y N 393 PHE OXT O N N 394 PHE H H N N 395 PHE H2 H N N 396 PHE HA H N N 397 PHE HB2 H N N 398 PHE HB3 H N N 399 PHE HD1 H N N 400 PHE HD2 H N N 401 PHE HE1 H N N 402 PHE HE2 H N N 403 PHE HZ H N N 404 PHE HXT H N N 405 PRO N N N N 406 PRO CA C N S 407 PRO C C N N 408 PRO O O N N 409 PRO CB C N N 410 PRO CG C N N 411 PRO CD C N N 412 PRO OXT O N N 413 PRO H H N N 414 PRO HA H N N 415 PRO HB2 H N N 416 PRO HB3 H N N 417 PRO HG2 H N N 418 PRO HG3 H N N 419 PRO HD2 H N N 420 PRO HD3 H N N 421 PRO HXT H N N 422 RET C1 C N N 423 RET C2 C N N 424 RET C3 C N N 425 RET C4 C N N 426 RET C5 C N N 427 RET C6 C N N 428 RET C7 C N N 429 RET C8 C N N 430 RET C9 C N N 431 RET C10 C N N 432 RET C11 C N N 433 RET C12 C N N 434 RET C13 C N N 435 RET C14 C N N 436 RET C15 C N N 437 RET O1 O N N 438 RET C16 C N N 439 RET C17 C N N 440 RET C18 C N N 441 RET C19 C N N 442 RET C20 C N N 443 RET H21 H N N 444 RET H22 H N N 445 RET H31 H N N 446 RET H32 H N N 447 RET H41 H N N 448 RET H42 H N N 449 RET H7 H N N 450 RET H8 H N N 451 RET H10 H N N 452 RET H11 H N N 453 RET H12 H N N 454 RET H14 H N N 455 RET H15 H N N 456 RET H161 H N N 457 RET H162 H N N 458 RET H163 H N N 459 RET H171 H N N 460 RET H172 H N N 461 RET H173 H N N 462 RET H181 H N N 463 RET H182 H N N 464 RET H183 H N N 465 RET H191 H N N 466 RET H192 H N N 467 RET H193 H N N 468 RET H201 H N N 469 RET H202 H N N 470 RET H203 H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 THR N N N N 486 THR CA C N S 487 THR C C N N 488 THR O O N N 489 THR CB C N R 490 THR OG1 O N N 491 THR CG2 C N N 492 THR OXT O N N 493 THR H H N N 494 THR H2 H N N 495 THR HA H N N 496 THR HB H N N 497 THR HG1 H N N 498 THR HG21 H N N 499 THR HG22 H N N 500 THR HG23 H N N 501 THR HXT H N N 502 TRP N N N N 503 TRP CA C N S 504 TRP C C N N 505 TRP O O N N 506 TRP CB C N N 507 TRP CG C Y N 508 TRP CD1 C Y N 509 TRP CD2 C Y N 510 TRP NE1 N Y N 511 TRP CE2 C Y N 512 TRP CE3 C Y N 513 TRP CZ2 C Y N 514 TRP CZ3 C Y N 515 TRP CH2 C Y N 516 TRP OXT O N N 517 TRP H H N N 518 TRP H2 H N N 519 TRP HA H N N 520 TRP HB2 H N N 521 TRP HB3 H N N 522 TRP HD1 H N N 523 TRP HE1 H N N 524 TRP HE3 H N N 525 TRP HZ2 H N N 526 TRP HZ3 H N N 527 TRP HH2 H N N 528 TRP HXT H N N 529 TYR N N N N 530 TYR CA C N S 531 TYR C C N N 532 TYR O O N N 533 TYR CB C N N 534 TYR CG C Y N 535 TYR CD1 C Y N 536 TYR CD2 C Y N 537 TYR CE1 C Y N 538 TYR CE2 C Y N 539 TYR CZ C Y N 540 TYR OH O N N 541 TYR OXT O N N 542 TYR H H N N 543 TYR H2 H N N 544 TYR HA H N N 545 TYR HB2 H N N 546 TYR HB3 H N N 547 TYR HD1 H N N 548 TYR HD2 H N N 549 TYR HE1 H N N 550 TYR HE2 H N N 551 TYR HH H N N 552 TYR HXT H N N 553 VAL N N N N 554 VAL CA C N S 555 VAL C C N N 556 VAL O O N N 557 VAL CB C N N 558 VAL CG1 C N N 559 VAL CG2 C N N 560 VAL OXT O N N 561 VAL H H N N 562 VAL H2 H N N 563 VAL HA H N N 564 VAL HB H N N 565 VAL HG11 H N N 566 VAL HG12 H N N 567 VAL HG13 H N N 568 VAL HG21 H N N 569 VAL HG22 H N N 570 VAL HG23 H N N 571 VAL HXT H N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DPG C1 C2 sing N N 70 DPG C1 O1 sing N N 71 DPG C1 H11 sing N N 72 DPG C1 H12 sing N N 73 DPG C2 C3 sing N N 74 DPG C2 O2 sing N N 75 DPG C2 H2 sing N N 76 DPG C3 O3 sing N N 77 DPG C3 H31 sing N N 78 DPG C3 H32 sing N N 79 DPG C4 C5 sing N N 80 DPG C4 O6 sing N N 81 DPG C4 H41 sing N N 82 DPG C4 H42 sing N N 83 DPG C5 C6 sing N N 84 DPG C5 O7 sing N N 85 DPG C5 H5 sing N N 86 DPG C6 O8 sing N N 87 DPG C6 H61 sing N N 88 DPG C6 H62 sing N N 89 DPG C11 C12 sing N N 90 DPG C11 O1 sing N N 91 DPG C11 H111 sing N N 92 DPG C11 H112 sing N N 93 DPG C12 C13 sing N N 94 DPG C12 H121 sing N N 95 DPG C12 H122 sing N N 96 DPG C13 C14 sing N N 97 DPG C13 C15 sing N N 98 DPG C13 H13 sing N N 99 DPG C14 H141 sing N N 100 DPG C14 H142 sing N N 101 DPG C14 H143 sing N N 102 DPG C15 C16 sing N N 103 DPG C15 H151 sing N N 104 DPG C15 H152 sing N N 105 DPG C16 C17 sing N N 106 DPG C16 H161 sing N N 107 DPG C16 H162 sing N N 108 DPG C17 C18 sing N N 109 DPG C17 H171 sing N N 110 DPG C17 H172 sing N N 111 DPG C18 C19 sing N N 112 DPG C18 C20 sing N N 113 DPG C18 H18 sing N N 114 DPG C19 H191 sing N N 115 DPG C19 H192 sing N N 116 DPG C19 H193 sing N N 117 DPG C20 C21 sing N N 118 DPG C20 H201 sing N N 119 DPG C20 H202 sing N N 120 DPG C21 C22 sing N N 121 DPG C21 H211 sing N N 122 DPG C21 H212 sing N N 123 DPG C22 C23 sing N N 124 DPG C22 H221 sing N N 125 DPG C22 H222 sing N N 126 DPG C23 C24 sing N N 127 DPG C23 C25 sing N N 128 DPG C23 H23 sing N N 129 DPG C24 H241 sing N N 130 DPG C24 H242 sing N N 131 DPG C24 H243 sing N N 132 DPG C25 C26 sing N N 133 DPG C25 H251 sing N N 134 DPG C25 H252 sing N N 135 DPG C26 C27 sing N N 136 DPG C26 H261 sing N N 137 DPG C26 H262 sing N N 138 DPG C27 C28 sing N N 139 DPG C27 H271 sing N N 140 DPG C27 H272 sing N N 141 DPG C28 C29 sing N N 142 DPG C28 C30 sing N N 143 DPG C28 H28 sing N N 144 DPG C29 H291 sing N N 145 DPG C29 H292 sing N N 146 DPG C29 H293 sing N N 147 DPG C30 H301 sing N N 148 DPG C30 H302 sing N N 149 DPG C30 H303 sing N N 150 DPG C41 C42 sing N N 151 DPG C41 O2 sing N N 152 DPG C41 H411 sing N N 153 DPG C41 H412 sing N N 154 DPG C42 C43 sing N N 155 DPG C42 H421 sing N N 156 DPG C42 H422 sing N N 157 DPG C43 C44 sing N N 158 DPG C43 C45 sing N N 159 DPG C43 H43 sing N N 160 DPG C44 H441 sing N N 161 DPG C44 H442 sing N N 162 DPG C44 H443 sing N N 163 DPG C45 C46 sing N N 164 DPG C45 H451 sing N N 165 DPG C45 H452 sing N N 166 DPG C46 C47 sing N N 167 DPG C46 H461 sing N N 168 DPG C46 H462 sing N N 169 DPG C47 C48 sing N N 170 DPG C47 H471 sing N N 171 DPG C47 H472 sing N N 172 DPG C48 C49 sing N N 173 DPG C48 C50 sing N N 174 DPG C48 H48 sing N N 175 DPG C49 H491 sing N N 176 DPG C49 H492 sing N N 177 DPG C49 H493 sing N N 178 DPG C50 C51 sing N N 179 DPG C50 H501 sing N N 180 DPG C50 H502 sing N N 181 DPG C51 C52 sing N N 182 DPG C51 H511 sing N N 183 DPG C51 H512 sing N N 184 DPG C52 C53 sing N N 185 DPG C52 H521 sing N N 186 DPG C52 H522 sing N N 187 DPG C53 C54 sing N N 188 DPG C53 C55 sing N N 189 DPG C53 H53 sing N N 190 DPG C54 H541 sing N N 191 DPG C54 H542 sing N N 192 DPG C54 H543 sing N N 193 DPG C55 C56 sing N N 194 DPG C55 H551 sing N N 195 DPG C55 H552 sing N N 196 DPG C56 C57 sing N N 197 DPG C56 H561 sing N N 198 DPG C56 H562 sing N N 199 DPG C57 C58 sing N N 200 DPG C57 H571 sing N N 201 DPG C57 H572 sing N N 202 DPG C58 C59 sing N N 203 DPG C58 C60 sing N N 204 DPG C58 H58 sing N N 205 DPG C59 H591 sing N N 206 DPG C59 H592 sing N N 207 DPG C59 H593 sing N N 208 DPG C60 H601 sing N N 209 DPG C60 H602 sing N N 210 DPG C60 H603 sing N N 211 DPG O3 P1 sing N N 212 DPG O4 P1 doub N N 213 DPG O5 P1 sing N N 214 DPG O5 HO5 sing N N 215 DPG O6 P1 sing N N 216 DPG O7 HO7 sing N N 217 DPG O8 P2 sing N N 218 DPG O9 P2 doub N N 219 DPG O10 P2 sing N N 220 DPG O10 HO0 sing N N 221 DPG O11 P2 sing N N 222 DPG O11 HO1 sing N N 223 GLN N CA sing N N 224 GLN N H sing N N 225 GLN N H2 sing N N 226 GLN CA C sing N N 227 GLN CA CB sing N N 228 GLN CA HA sing N N 229 GLN C O doub N N 230 GLN C OXT sing N N 231 GLN CB CG sing N N 232 GLN CB HB2 sing N N 233 GLN CB HB3 sing N N 234 GLN CG CD sing N N 235 GLN CG HG2 sing N N 236 GLN CG HG3 sing N N 237 GLN CD OE1 doub N N 238 GLN CD NE2 sing N N 239 GLN NE2 HE21 sing N N 240 GLN NE2 HE22 sing N N 241 GLN OXT HXT sing N N 242 GLU N CA sing N N 243 GLU N H sing N N 244 GLU N H2 sing N N 245 GLU CA C sing N N 246 GLU CA CB sing N N 247 GLU CA HA sing N N 248 GLU C O doub N N 249 GLU C OXT sing N N 250 GLU CB CG sing N N 251 GLU CB HB2 sing N N 252 GLU CB HB3 sing N N 253 GLU CG CD sing N N 254 GLU CG HG2 sing N N 255 GLU CG HG3 sing N N 256 GLU CD OE1 doub N N 257 GLU CD OE2 sing N N 258 GLU OE2 HE2 sing N N 259 GLU OXT HXT sing N N 260 GLY N CA sing N N 261 GLY N H sing N N 262 GLY N H2 sing N N 263 GLY CA C sing N N 264 GLY CA HA2 sing N N 265 GLY CA HA3 sing N N 266 GLY C O doub N N 267 GLY C OXT sing N N 268 GLY OXT HXT sing N N 269 ILE N CA sing N N 270 ILE N H sing N N 271 ILE N H2 sing N N 272 ILE CA C sing N N 273 ILE CA CB sing N N 274 ILE CA HA sing N N 275 ILE C O doub N N 276 ILE C OXT sing N N 277 ILE CB CG1 sing N N 278 ILE CB CG2 sing N N 279 ILE CB HB sing N N 280 ILE CG1 CD1 sing N N 281 ILE CG1 HG12 sing N N 282 ILE CG1 HG13 sing N N 283 ILE CG2 HG21 sing N N 284 ILE CG2 HG22 sing N N 285 ILE CG2 HG23 sing N N 286 ILE CD1 HD11 sing N N 287 ILE CD1 HD12 sing N N 288 ILE CD1 HD13 sing N N 289 ILE OXT HXT sing N N 290 LEU N CA sing N N 291 LEU N H sing N N 292 LEU N H2 sing N N 293 LEU CA C sing N N 294 LEU CA CB sing N N 295 LEU CA HA sing N N 296 LEU C O doub N N 297 LEU C OXT sing N N 298 LEU CB CG sing N N 299 LEU CB HB2 sing N N 300 LEU CB HB3 sing N N 301 LEU CG CD1 sing N N 302 LEU CG CD2 sing N N 303 LEU CG HG sing N N 304 LEU CD1 HD11 sing N N 305 LEU CD1 HD12 sing N N 306 LEU CD1 HD13 sing N N 307 LEU CD2 HD21 sing N N 308 LEU CD2 HD22 sing N N 309 LEU CD2 HD23 sing N N 310 LEU OXT HXT sing N N 311 LYS N CA sing N N 312 LYS N H sing N N 313 LYS N H2 sing N N 314 LYS CA C sing N N 315 LYS CA CB sing N N 316 LYS CA HA sing N N 317 LYS C O doub N N 318 LYS C OXT sing N N 319 LYS CB CG sing N N 320 LYS CB HB2 sing N N 321 LYS CB HB3 sing N N 322 LYS CG CD sing N N 323 LYS CG HG2 sing N N 324 LYS CG HG3 sing N N 325 LYS CD CE sing N N 326 LYS CD HD2 sing N N 327 LYS CD HD3 sing N N 328 LYS CE NZ sing N N 329 LYS CE HE2 sing N N 330 LYS CE HE3 sing N N 331 LYS NZ HZ1 sing N N 332 LYS NZ HZ2 sing N N 333 LYS NZ HZ3 sing N N 334 LYS OXT HXT sing N N 335 MET N CA sing N N 336 MET N H sing N N 337 MET N H2 sing N N 338 MET CA C sing N N 339 MET CA CB sing N N 340 MET CA HA sing N N 341 MET C O doub N N 342 MET C OXT sing N N 343 MET CB CG sing N N 344 MET CB HB2 sing N N 345 MET CB HB3 sing N N 346 MET CG SD sing N N 347 MET CG HG2 sing N N 348 MET CG HG3 sing N N 349 MET SD CE sing N N 350 MET CE HE1 sing N N 351 MET CE HE2 sing N N 352 MET CE HE3 sing N N 353 MET OXT HXT sing N N 354 PCA N CA sing N N 355 PCA N CD sing N N 356 PCA N H sing N N 357 PCA CA CB sing N N 358 PCA CA C sing N N 359 PCA CA HA sing N N 360 PCA CB CG sing N N 361 PCA CB HB2 sing N N 362 PCA CB HB3 sing N N 363 PCA CG CD sing N N 364 PCA CG HG2 sing N N 365 PCA CG HG3 sing N N 366 PCA CD OE doub N N 367 PCA C O doub N N 368 PCA C OXT sing N N 369 PCA OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 RET C1 C2 sing N N 411 RET C1 C6 sing N N 412 RET C1 C16 sing N N 413 RET C1 C17 sing N N 414 RET C2 C3 sing N N 415 RET C2 H21 sing N N 416 RET C2 H22 sing N N 417 RET C3 C4 sing N N 418 RET C3 H31 sing N N 419 RET C3 H32 sing N N 420 RET C4 C5 sing N N 421 RET C4 H41 sing N N 422 RET C4 H42 sing N N 423 RET C5 C6 doub N N 424 RET C5 C18 sing N N 425 RET C6 C7 sing N N 426 RET C7 C8 doub N E 427 RET C7 H7 sing N N 428 RET C8 C9 sing N N 429 RET C8 H8 sing N N 430 RET C9 C10 doub N E 431 RET C9 C19 sing N N 432 RET C10 C11 sing N N 433 RET C10 H10 sing N N 434 RET C11 C12 doub N E 435 RET C11 H11 sing N N 436 RET C12 C13 sing N N 437 RET C12 H12 sing N N 438 RET C13 C14 doub N E 439 RET C13 C20 sing N N 440 RET C14 C15 sing N N 441 RET C14 H14 sing N N 442 RET C15 O1 doub N N 443 RET C15 H15 sing N N 444 RET C16 H161 sing N N 445 RET C16 H162 sing N N 446 RET C16 H163 sing N N 447 RET C17 H171 sing N N 448 RET C17 H172 sing N N 449 RET C17 H173 sing N N 450 RET C18 H181 sing N N 451 RET C18 H182 sing N N 452 RET C18 H183 sing N N 453 RET C19 H191 sing N N 454 RET C19 H192 sing N N 455 RET C19 H193 sing N N 456 RET C20 H201 sing N N 457 RET C20 H202 sing N N 458 RET C20 H203 sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 THR N CA sing N N 473 THR N H sing N N 474 THR N H2 sing N N 475 THR CA C sing N N 476 THR CA CB sing N N 477 THR CA HA sing N N 478 THR C O doub N N 479 THR C OXT sing N N 480 THR CB OG1 sing N N 481 THR CB CG2 sing N N 482 THR CB HB sing N N 483 THR OG1 HG1 sing N N 484 THR CG2 HG21 sing N N 485 THR CG2 HG22 sing N N 486 THR CG2 HG23 sing N N 487 THR OXT HXT sing N N 488 TRP N CA sing N N 489 TRP N H sing N N 490 TRP N H2 sing N N 491 TRP CA C sing N N 492 TRP CA CB sing N N 493 TRP CA HA sing N N 494 TRP C O doub N N 495 TRP C OXT sing N N 496 TRP CB CG sing N N 497 TRP CB HB2 sing N N 498 TRP CB HB3 sing N N 499 TRP CG CD1 doub Y N 500 TRP CG CD2 sing Y N 501 TRP CD1 NE1 sing Y N 502 TRP CD1 HD1 sing N N 503 TRP CD2 CE2 doub Y N 504 TRP CD2 CE3 sing Y N 505 TRP NE1 CE2 sing Y N 506 TRP NE1 HE1 sing N N 507 TRP CE2 CZ2 sing Y N 508 TRP CE3 CZ3 doub Y N 509 TRP CE3 HE3 sing N N 510 TRP CZ2 CH2 doub Y N 511 TRP CZ2 HZ2 sing N N 512 TRP CZ3 CH2 sing Y N 513 TRP CZ3 HZ3 sing N N 514 TRP CH2 HH2 sing N N 515 TRP OXT HXT sing N N 516 TYR N CA sing N N 517 TYR N H sing N N 518 TYR N H2 sing N N 519 TYR CA C sing N N 520 TYR CA CB sing N N 521 TYR CA HA sing N N 522 TYR C O doub N N 523 TYR C OXT sing N N 524 TYR CB CG sing N N 525 TYR CB HB2 sing N N 526 TYR CB HB3 sing N N 527 TYR CG CD1 doub Y N 528 TYR CG CD2 sing Y N 529 TYR CD1 CE1 sing Y N 530 TYR CD1 HD1 sing N N 531 TYR CD2 CE2 doub Y N 532 TYR CD2 HD2 sing N N 533 TYR CE1 CZ doub Y N 534 TYR CE1 HE1 sing N N 535 TYR CE2 CZ sing Y N 536 TYR CE2 HE2 sing N N 537 TYR CZ OH sing N N 538 TYR OH HH sing N N 539 TYR OXT HXT sing N N 540 VAL N CA sing N N 541 VAL N H sing N N 542 VAL N H2 sing N N 543 VAL CA C sing N N 544 VAL CA CB sing N N 545 VAL CA HA sing N N 546 VAL C O doub N N 547 VAL C OXT sing N N 548 VAL CB CG1 sing N N 549 VAL CB CG2 sing N N 550 VAL CB HB sing N N 551 VAL CG1 HG11 sing N N 552 VAL CG1 HG12 sing N N 553 VAL CG1 HG13 sing N N 554 VAL CG2 HG21 sing N N 555 VAL CG2 HG22 sing N N 556 VAL CG2 HG23 sing N N 557 VAL OXT HXT sing N N 558 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # loop_ _em_image_recording.id _em_image_recording.imaging_id _em_image_recording.film_or_detector_model _em_image_recording.avg_electron_dose_per_image _em_image_recording.average_exposure_time _em_image_recording.details _em_image_recording.num_grids_imaged _em_image_recording.num_diffraction_images _em_image_recording.num_real_images _em_image_recording.detector_mode 2 2 'GENERIC FILM' 20 12 ? ? ? 52 ? 3 3 'GENERIC FILM' 15 ? ? ? ? 20 ? 1 1 'GENERIC FILM' ? ? ? ? 150 ? ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied YES _em_specimen.shadowing_applied NO _em_specimen.details ? # _atom_sites.entry_id 2BRD _atom_sites.fract_transf_matrix[1][1] 0.016013 _atom_sites.fract_transf_matrix[1][2] 0.009245 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018490 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009911 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_