HEADER TRANSFERASE 07-JUN-05 2BTW TITLE CRYSTAL STRUCTURE OF ALR0975 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALR0975 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PRIMITIVE PHYTOCHELATIN SYNTHASE; COMPND 5 EC: 2.3.2.15; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ALR0975 PROTEIN; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PRIMITIVE PHYTOCHELATIN SYNTHASE; COMPND 11 EC: 2.3.2.15; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANABAENA SP.; SOURCE 3 ORGANISM_COMMON: NOSTOC SP. PCC 7120; SOURCE 4 ORGANISM_TAXID: 103690; SOURCE 5 STRAIN: PCC 7120; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PJC40; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ANABAENA SP.; SOURCE 11 ORGANISM_COMMON: NOSTOC SP. PCC 7120; SOURCE 12 ORGANISM_TAXID: 103690; SOURCE 13 STRAIN: PCC 7120; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PJC40 KEYWDS PHYTOCHELATIN SYNTHASE, PCS, ALR0975, NOSTOC, GLUTATHIONE KEYWDS 2 METABOLISM, CYSTEINE PROTEASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.VIVARES,P.ARNOUX,D.PIGNOL REVDAT 4 13-JUL-11 2BTW 1 VERSN REVDAT 3 24-FEB-09 2BTW 1 VERSN REVDAT 2 04-JAN-06 2BTW 1 JRNL REVDAT 1 14-DEC-05 2BTW 0 JRNL AUTH D.VIVARES,P.ARNOUX,D.PIGNOL JRNL TITL A PAPAIN-LIKE ENZYME AT WORK: NATIVE AND ACYL- ENZYME JRNL TITL 2 INTERMEDIATE STRUCTURES IN PHYTOCHELATIN SYNTHESIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 18848 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 16339904 JRNL DOI 10.1073/PNAS.0505833102 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.TSUJI,S.NISHIKORI,O.IWABE,K.SHIRAKI,H.MIYASAKA,M.TAKAGI, REMARK 1 AUTH 2 K.HIRATA,K.MIYAMOTO REMARK 1 TITL CHARACTERIZATION OF PHYTOCHELATIN SYNTHASE-LIKE PROTEIN REMARK 1 TITL 2 ENCODED BY ALR0975 FROM A PROKARYOTE, NOSTOC SP. PCC 7120 REMARK 1 REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 315 751 2004 REMARK 1 REFN ISSN 0006-291X REMARK 1 PMID 14975765 REMARK 1 DOI 10.1016/J.BBRC.2004.01.122 REMARK 1 REFERENCE 2 REMARK 1 AUTH E.HARADA,E.VON ROEPENACK-LAHAYE,S.CLEMENS REMARK 1 TITL A CYANOBACTERIAL PROTEIN WITH SIMILARITY TO PHYTOCHELATIN REMARK 1 TITL 2 SYNTHASES CATALYZES THE CONVERSION OF GLUTATHIONE TO REMARK 1 TITL 3 GAMMA-GLUTAMYLCYSTEINE AND LACKS PHYTOCHELATIN SYNTHASE REMARK 1 TITL 4 ACTIVITY REMARK 1 REF PHYTOCHEMISTRY V. 65 3179 2004 REMARK 1 REFN ISSN 0031-9422 REMARK 1 PMID 15561184 REMARK 1 DOI 10.1016/J.PHYTOCHEM.2004.09.017 REMARK 2 REMARK 2 RESOLUTION. 2.0 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1503 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1975 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3258 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 82 REMARK 3 SOLVENT ATOMS : 258 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.208 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.084 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3404 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4609 ; 1.719 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2173 ; 1.207 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3392 ; 1.685 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1428 ; 3.131 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1217 ; 4.421 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 29 A 238 REMARK 3 RESIDUE RANGE : B 29 B 238 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3166 26.1328 21.0150 REMARK 3 T TENSOR REMARK 3 T11: 0.0044 T22: 0.0246 REMARK 3 T33: 0.0358 T12: 0.0116 REMARK 3 T13: 0.0037 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.0028 L22: 0.0109 REMARK 3 L33: 0.2489 L12: 0.0055 REMARK 3 L13: 0.0266 L23: 0.0517 REMARK 3 S TENSOR REMARK 3 S11: 0.0112 S12: 0.0154 S13: -0.0104 REMARK 3 S21: -0.0548 S22: -0.0105 S23: -0.0118 REMARK 3 S31: -0.0041 S32: 0.0122 S33: -0.0007 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. ELECTRON DENSITY IS MISSING FOR THE TAG AND REMARK 3 THE FOUR N-TERMINAL RESIDUES AS WELL AS THE THREE C-TERMINAL REMARK 3 RESIDUES REMARK 4 REMARK 4 2BTW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-05. REMARK 100 THE PDBE ID CODE IS EBI-24380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935,0.974 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27903 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 18.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.23350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A -10 REMARK 465 CYS A -9 REMARK 465 LEU A -8 REMARK 465 THR A -7 REMARK 465 LEU A -6 REMARK 465 ARG A -5 REMARK 465 ARG A -4 REMARK 465 ARG A -3 REMARK 465 TYR A -2 REMARK 465 THR A -1 REMARK 465 MSE A 0 REMARK 465 GLY A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 GLY A 14 REMARK 465 HIS A 15 REMARK 465 ILE A 16 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 ARG A 19 REMARK 465 HIS A 20 REMARK 465 MSE A 21 REMARK 465 LYS A 22 REMARK 465 LEU A 23 REMARK 465 GLU A 24 REMARK 465 GLN A 25 REMARK 465 THR A 26 REMARK 465 LEU A 27 REMARK 465 THR A 28 REMARK 465 LYS A 239 REMARK 465 THR A 240 REMARK 465 GLN A 241 REMARK 465 ASP A 242 REMARK 465 ASP A 243 REMARK 465 PHE B -10 REMARK 465 CYS B -9 REMARK 465 LEU B -8 REMARK 465 THR B -7 REMARK 465 LEU B -6 REMARK 465 ARG B -5 REMARK 465 ARG B -4 REMARK 465 ARG B -3 REMARK 465 TYR B -2 REMARK 465 THR B -1 REMARK 465 MSE B 0 REMARK 465 GLY B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 SER B 12 REMARK 465 SER B 13 REMARK 465 GLY B 14 REMARK 465 HIS B 15 REMARK 465 ILE B 16 REMARK 465 GLU B 17 REMARK 465 GLY B 18 REMARK 465 ARG B 19 REMARK 465 HIS B 20 REMARK 465 MSE B 21 REMARK 465 LYS B 22 REMARK 465 LEU B 23 REMARK 465 GLU B 24 REMARK 465 GLN B 25 REMARK 465 THR B 26 REMARK 465 LEU B 27 REMARK 465 THR B 28 REMARK 465 LYS B 239 REMARK 465 THR B 240 REMARK 465 GLN B 241 REMARK 465 ASP B 242 REMARK 465 ASP B 243 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 58 O HOH A 2016 2.10 REMARK 500 OE2 GLU B 52 O LYS B 161 2.17 REMARK 500 NZ LYS B 120 O HOH B 2069 1.75 REMARK 500 O HOH A 2065 O HOH A 2113 2.18 REMARK 500 O HOH B 2020 O HOH B 2021 1.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 51 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 204 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 204 NE - CZ - NH2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG B 204 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG B 204 NE - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 37 41.70 -78.54 REMARK 500 ARG A 51 11.46 -146.92 REMARK 500 ILE A 84 -143.74 -60.38 REMARK 500 THR A 147 -158.62 -131.81 REMARK 500 ARG A 180 -108.48 109.93 REMARK 500 ASN B 37 43.02 -77.66 REMARK 500 ARG B 51 16.27 -147.25 REMARK 500 ILE B 84 -150.14 -44.10 REMARK 500 ARG B 180 -105.81 115.47 REMARK 500 ARG B 232 -167.13 -73.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 179 ARG A 180 134.97 REMARK 500 GLU B 179 ARG B 180 128.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ARG A 180 23.2 L L OUTSIDE RANGE REMARK 500 THR B 99 45.7 L L OUTSIDE RANGE REMARK 500 ARG B 180 23.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 400 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 53 OD1 REMARK 620 2 ASP A 53 OD2 50.5 REMARK 620 3 ASN A 159 O 122.4 109.5 REMARK 620 4 GLN A 162 O 87.9 138.4 92.4 REMARK 620 5 ASN A 165 O 96.5 74.3 133.4 115.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 400 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 53 OD1 REMARK 620 2 ASP B 53 OD2 51.0 REMARK 620 3 ASN B 159 O 124.4 110.3 REMARK 620 4 GLN B 162 O 87.6 138.6 90.1 REMARK 620 5 ASN B 165 O 88.5 80.2 145.3 103.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 400 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BU3 RELATED DB: PDB REMARK 900 ACYL-ENZYME INTERMEDIATE BETWEEN ALR0975 AND REMARK 900 GLUTATHIONE AT PH 3.4 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PUTATIVE N-TERMINAL SECRETION SIGNAL WAS NOT INCLUDED REMARK 999 IN THE CONSTRUCTION DBREF 2BTW A -10 24 PDB 2BTW 2BTW -10 24 DBREF 2BTW A 25 242 UNP Q8YY76 Q8YY76_ANASP 25 242 DBREF 2BTW A 243 243 PDB 2BTW 2BTW 243 243 DBREF 2BTW B -10 24 PDB 2BTW 2BTW -10 24 DBREF 2BTW B 25 242 UNP Q8YY76 Q8YY76_ANASP 25 242 DBREF 2BTW B 243 243 PDB 2BTW 2BTW 243 243 SEQADV 2BTW LYS B 120 PDB Q8YY76 ARG 120 CONFLICT SEQRES 1 A 254 PHE CYS LEU THR LEU ARG ARG ARG TYR THR MSE GLY HIS SEQRES 2 A 254 HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SER GLY HIS SEQRES 3 A 254 ILE GLU GLY ARG HIS MSE LYS LEU GLU GLN THR LEU THR SEQRES 4 A 254 LEU SER PRO ASN LEU ILE GLY PHE ASN SER ASN GLU GLY SEQRES 5 A 254 GLU LYS LEU LEU LEU THR SER ARG SER ARG GLU ASP PHE SEQRES 6 A 254 PHE PRO LEU SER MSE GLN PHE VAL THR GLN VAL ASN GLN SEQRES 7 A 254 ALA TYR CYS GLY VAL ALA SER ILE ILE MSE VAL LEU ASN SEQRES 8 A 254 SER LEU GLY ILE ASN ALA PRO GLU THR ALA GLN TYR SER SEQRES 9 A 254 PRO TYR ARG VAL PHE THR GLN ASP ASN PHE PHE SER ASN SEQRES 10 A 254 GLU LYS THR LYS ALA VAL ILE ALA PRO GLU VAL VAL ALA SEQRES 11 A 254 ARG GLN GLY MSE THR LEU ASP GLU LEU GLY ARG LEU ILE SEQRES 12 A 254 ALA SER TYR GLY VAL LYS VAL LYS VAL ASN HIS ALA SER SEQRES 13 A 254 ASP THR ASN ILE GLU ASP PHE ARG LYS GLN VAL ALA GLU SEQRES 14 A 254 ASN LEU LYS GLN ASP GLY ASN PHE VAL ILE VAL ASN TYR SEQRES 15 A 254 LEU ARG LYS GLU ILE GLY GLN GLU ARG GLY GLY HIS ILE SEQRES 16 A 254 SER PRO LEU ALA ALA TYR ASN GLU GLN THR ASP ARG PHE SEQRES 17 A 254 LEU ILE MSE ASP VAL SER ARG TYR LYS TYR PRO PRO VAL SEQRES 18 A 254 TRP VAL LYS THR THR ASP LEU TRP LYS ALA MSE ASN THR SEQRES 19 A 254 VAL ASP SER VAL SER GLN LYS THR ARG GLY PHE VAL PHE SEQRES 20 A 254 VAL SER LYS THR GLN ASP ASP SEQRES 1 B 254 PHE CYS LEU THR LEU ARG ARG ARG TYR THR MSE GLY HIS SEQRES 2 B 254 HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SER GLY HIS SEQRES 3 B 254 ILE GLU GLY ARG HIS MSE LYS LEU GLU GLN THR LEU THR SEQRES 4 B 254 LEU SER PRO ASN LEU ILE GLY PHE ASN SER ASN GLU GLY SEQRES 5 B 254 GLU LYS LEU LEU LEU THR SER ARG SER ARG GLU ASP PHE SEQRES 6 B 254 PHE PRO LEU SER MSE GLN PHE VAL THR GLN VAL ASN GLN SEQRES 7 B 254 ALA TYR CYS GLY VAL ALA SER ILE ILE MSE VAL LEU ASN SEQRES 8 B 254 SER LEU GLY ILE ASN ALA PRO GLU THR ALA GLN TYR SER SEQRES 9 B 254 PRO TYR ARG VAL PHE THR GLN ASP ASN PHE PHE SER ASN SEQRES 10 B 254 GLU LYS THR LYS ALA VAL ILE ALA PRO GLU VAL VAL ALA SEQRES 11 B 254 LYS GLN GLY MSE THR LEU ASP GLU LEU GLY ARG LEU ILE SEQRES 12 B 254 ALA SER TYR GLY VAL LYS VAL LYS VAL ASN HIS ALA SER SEQRES 13 B 254 ASP THR ASN ILE GLU ASP PHE ARG LYS GLN VAL ALA GLU SEQRES 14 B 254 ASN LEU LYS GLN ASP GLY ASN PHE VAL ILE VAL ASN TYR SEQRES 15 B 254 LEU ARG LYS GLU ILE GLY GLN GLU ARG GLY GLY HIS ILE SEQRES 16 B 254 SER PRO LEU ALA ALA TYR ASN GLU GLN THR ASP ARG PHE SEQRES 17 B 254 LEU ILE MSE ASP VAL SER ARG TYR LYS TYR PRO PRO VAL SEQRES 18 B 254 TRP VAL LYS THR THR ASP LEU TRP LYS ALA MSE ASN THR SEQRES 19 B 254 VAL ASP SER VAL SER GLN LYS THR ARG GLY PHE VAL PHE SEQRES 20 B 254 VAL SER LYS THR GLN ASP ASP MODRES 2BTW MSE A 59 MET SELENOMETHIONINE MODRES 2BTW MSE A 77 MET SELENOMETHIONINE MODRES 2BTW MSE A 123 MET SELENOMETHIONINE MODRES 2BTW MSE A 200 MET SELENOMETHIONINE MODRES 2BTW MSE A 221 MET SELENOMETHIONINE MODRES 2BTW MSE B 59 MET SELENOMETHIONINE MODRES 2BTW MSE B 77 MET SELENOMETHIONINE MODRES 2BTW MSE B 123 MET SELENOMETHIONINE MODRES 2BTW MSE B 200 MET SELENOMETHIONINE MODRES 2BTW MSE B 221 MET SELENOMETHIONINE HET MSE A 59 8 HET MSE A 77 8 HET MSE A 123 8 HET MSE A 200 8 HET MSE A 221 8 HET MSE B 59 8 HET MSE B 77 8 HET MSE B 123 8 HET MSE B 200 8 HET MSE B 221 8 HET CA A 400 1 HET CA B 400 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *258(H2 O) HELIX 1 1 SER A 38 THR A 47 1 10 HELIX 2 2 ASP A 53 PHE A 61 1 9 HELIX 3 3 ASN A 66 ALA A 68 5 3 HELIX 4 4 TYR A 69 GLY A 83 1 15 HELIX 5 5 ASN A 102 SER A 105 5 4 HELIX 6 6 ASN A 106 ILE A 113 1 8 HELIX 7 7 ALA A 114 GLY A 122 1 9 HELIX 8 8 THR A 124 SER A 134 1 11 HELIX 9 9 SER A 145 THR A 147 5 3 HELIX 10 10 ASN A 148 LEU A 160 1 13 HELIX 11 11 LYS A 174 GLY A 177 5 4 HELIX 12 12 THR A 214 ASN A 222 1 9 HELIX 13 13 SER B 38 THR B 47 1 10 HELIX 14 14 ASP B 53 PHE B 61 1 9 HELIX 15 15 ASN B 66 ALA B 68 5 3 HELIX 16 16 TYR B 69 GLY B 83 1 15 HELIX 17 17 ASN B 102 SER B 105 5 4 HELIX 18 18 ASN B 106 ILE B 113 1 8 HELIX 19 19 ALA B 114 GLY B 122 1 9 HELIX 20 20 THR B 124 SER B 134 1 11 HELIX 21 21 SER B 145 THR B 147 5 3 HELIX 22 22 ASN B 148 GLN B 162 1 15 HELIX 23 23 LYS B 174 GLY B 177 5 4 HELIX 24 24 THR B 214 ASN B 222 1 9 SHEET 1 AA 7 LEU A 33 GLY A 35 0 SHEET 2 AA 7 VAL A 210 LYS A 213 -1 O TRP A 211 N ILE A 34 SHEET 3 AA 7 ARG A 196 ILE A 199 -1 O PHE A 197 N VAL A 212 SHEET 4 AA 7 GLY A 182 ASN A 191 -1 N ALA A 188 O LEU A 198 SHEET 5 AA 7 PHE A 166 LEU A 172 -1 O VAL A 167 N LEU A 187 SHEET 6 AA 7 GLY A 233 SER A 238 -1 O GLY A 233 N ASN A 170 SHEET 7 AA 7 LYS A 138 HIS A 143 -1 O LYS A 138 N SER A 238 SHEET 1 AB 2 VAL A 224 ASP A 225 0 SHEET 2 AB 2 LYS A 230 THR A 231 -1 O LYS A 230 N ASP A 225 SHEET 1 BA 7 LEU B 33 GLY B 35 0 SHEET 2 BA 7 VAL B 210 LYS B 213 -1 O TRP B 211 N ILE B 34 SHEET 3 BA 7 ARG B 196 ILE B 199 -1 O PHE B 197 N VAL B 212 SHEET 4 BA 7 GLY B 182 ASN B 191 -1 N ALA B 188 O LEU B 198 SHEET 5 BA 7 PHE B 166 LEU B 172 -1 O VAL B 167 N LEU B 187 SHEET 6 BA 7 GLY B 233 SER B 238 -1 O GLY B 233 N ASN B 170 SHEET 7 BA 7 LYS B 138 HIS B 143 -1 O LYS B 138 N SER B 238 SHEET 1 BB 2 VAL B 224 ASP B 225 0 SHEET 2 BB 2 LYS B 230 THR B 231 -1 O LYS B 230 N ASP B 225 LINK C SER A 58 N MSE A 59 1555 1555 1.33 LINK C MSE A 59 N GLN A 60 1555 1555 1.33 LINK C ILE A 76 N MSE A 77 1555 1555 1.33 LINK C MSE A 77 N VAL A 78 1555 1555 1.34 LINK C GLY A 122 N MSE A 123 1555 1555 1.31 LINK C MSE A 123 N THR A 124 1555 1555 1.31 LINK C ILE A 199 N MSE A 200 1555 1555 1.32 LINK C MSE A 200 N ASP A 201 1555 1555 1.34 LINK C ALA A 220 N MSE A 221 1555 1555 1.34 LINK C MSE A 221 N ASN A 222 1555 1555 1.34 LINK CA CA A 400 OD1 ASP A 53 1555 1555 2.38 LINK CA CA A 400 O ASN A 165 1555 1555 2.10 LINK CA CA A 400 O GLN A 162 1555 1555 2.36 LINK CA CA A 400 O ASN A 159 1555 1555 2.21 LINK CA CA A 400 OD2 ASP A 53 1555 1555 2.72 LINK C SER B 58 N MSE B 59 1555 1555 1.34 LINK C MSE B 59 N GLN B 60 1555 1555 1.33 LINK C ILE B 76 N MSE B 77 1555 1555 1.32 LINK C MSE B 77 N VAL B 78 1555 1555 1.34 LINK C GLY B 122 N MSE B 123 1555 1555 1.32 LINK C MSE B 123 N THR B 124 1555 1555 1.31 LINK C ILE B 199 N MSE B 200 1555 1555 1.33 LINK C MSE B 200 N ASP B 201 1555 1555 1.32 LINK C ALA B 220 N MSE B 221 1555 1555 1.33 LINK C MSE B 221 N ASN B 222 1555 1555 1.33 LINK CA CA B 400 OD2 ASP B 53 1555 1555 2.59 LINK CA CA B 400 O ASN B 159 1555 1555 2.16 LINK CA CA B 400 O GLN B 162 1555 1555 2.46 LINK CA CA B 400 O ASN B 165 1555 1555 2.28 LINK CA CA B 400 OD1 ASP B 53 1555 1555 2.44 CISPEP 1 SER A 93 PRO A 94 0 8.96 CISPEP 2 SER B 93 PRO B 94 0 3.35 SITE 1 AC1 4 ASP A 53 ASN A 159 GLN A 162 ASN A 165 SITE 1 AC2 4 ASP B 53 ASN B 159 GLN B 162 ASN B 165 CRYST1 47.860 62.467 76.552 90.00 101.38 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020894 0.000000 0.004205 0.00000 SCALE2 0.000000 0.016008 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013325 0.00000 MTRIX1 1 -1.000000 -0.000150 0.000540 56.65526 1 MTRIX2 1 0.000140 -0.999980 -0.006830 52.43811 1 MTRIX3 1 0.000540 -0.006830 0.999980 0.17243 1