HEADER TRANSFERASE 13-JUN-05 2BUJ TITLE CRYSTAL STRUCTURE OF THE HUMAN SERINE-THREONINE KINASE 16 IN COMPLEX TITLE 2 WITH STAUROSPORINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE 16; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HUMAN SERINE THREONINE KINASE 16, PROTEIN KINASE PKL12, COMPND 5 MYRISTOYLATED AND PALMITOYLATED SERINE/THREONINE KINASE, MPSK, TGF- COMPND 6 BETA STIMULATED FACTOR 1, TSF-1, HPSK; COMPND 7 EC: 2.7.1.37; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA II; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P11-TORONTO KEYWDS TRANSFERASE, ATP-BINDING, KINASE, LIPOPROTEIN, MYRISTATE, PALMITATE, KEYWDS 2 PHOSPHORYLATION, SERINE/THREONINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.DEBRECZENI,J.ESWARAN,A.BULLOCK,P.FILIPPAKOPOULOS,K.KAVANAGH, AUTHOR 2 A.AMOS,O.FEDOROV,F.SOBOTT,L.J.BALL,F.VON DELFT,C.ARROWSMITH, AUTHOR 3 M.SUNDSTROM,A.EDWARDS,S.KNAPP REVDAT 8 08-MAY-24 2BUJ 1 REMARK REVDAT 7 08-MAY-19 2BUJ 1 REMARK REVDAT 6 10-APR-19 2BUJ 1 SOURCE REVDAT 5 24-JAN-18 2BUJ 1 AUTHOR JRNL REVDAT 4 13-JUL-11 2BUJ 1 VERSN REVDAT 3 24-FEB-09 2BUJ 1 VERSN REVDAT 2 14-JUL-05 2BUJ 1 REMARK REVDAT 1 05-JUL-05 2BUJ 0 JRNL AUTH J.E.DEBRECZENI,J.ESWARAN,A.BULLOCK,P.FILIPPAKOPOULOS, JRNL AUTH 2 K.KAVANAGH,A.AMOS,O.FEDOROV,F.SOBOTT,L.J.BALL,F.VON DELFT, JRNL AUTH 3 C.ARROWSMITH,M.SUNDSTROM,A.EDWARDS,S.KNAPP JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN SERINE-THREONINE KINASE 16 IN JRNL TITL 2 COMPLEX WITH STAUROSPORINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33626 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1792 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2392 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4548 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 142 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.63000 REMARK 3 B22 (A**2) : -0.90000 REMARK 3 B33 (A**2) : 0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.280 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.228 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.172 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.620 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4828 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4321 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6597 ; 1.536 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9961 ; 0.887 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 571 ; 6.142 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;31.931 ;23.710 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 756 ;16.751 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;21.879 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 708 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5320 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1001 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 952 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4106 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2311 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2818 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 88 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.173 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 49 ; 0.250 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.160 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2985 ; 2.244 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1170 ; 0.444 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4575 ; 3.505 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2863 ; 4.872 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2022 ; 7.821 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5101 -23.4996 -16.8711 REMARK 3 T TENSOR REMARK 3 T11: 0.0677 T22: 0.1803 REMARK 3 T33: 0.0568 T12: -0.0633 REMARK 3 T13: -0.0104 T23: 0.0864 REMARK 3 L TENSOR REMARK 3 L11: 0.5874 L22: 3.2040 REMARK 3 L33: 3.2398 L12: -0.6847 REMARK 3 L13: 0.3414 L23: -2.4128 REMARK 3 S TENSOR REMARK 3 S11: -0.0696 S12: 0.1394 S13: 0.1538 REMARK 3 S21: 0.0665 S22: -0.0042 S23: -0.0292 REMARK 3 S31: -0.0881 S32: 0.2061 S33: 0.0738 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 299 REMARK 3 ORIGIN FOR THE GROUP (A): -15.1204 -35.5731 7.8541 REMARK 3 T TENSOR REMARK 3 T11: 0.1333 T22: 0.0183 REMARK 3 T33: 0.0302 T12: -0.0289 REMARK 3 T13: 0.0648 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 3.9760 L22: 1.5525 REMARK 3 L33: 2.0418 L12: 0.8864 REMARK 3 L13: 0.5136 L23: -0.0188 REMARK 3 S TENSOR REMARK 3 S11: 0.0446 S12: -0.2332 S13: 0.2267 REMARK 3 S21: 0.2157 S22: -0.0808 S23: 0.0497 REMARK 3 S31: -0.2118 S32: -0.0567 S33: 0.0362 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 113 REMARK 3 ORIGIN FOR THE GROUP (A): -27.4782 -13.6960 -41.7454 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: 0.0017 REMARK 3 T33: 0.0902 T12: 0.0258 REMARK 3 T13: 0.0249 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 3.4364 L22: 1.6939 REMARK 3 L33: 4.6846 L12: 2.1670 REMARK 3 L13: 1.9672 L23: 1.5176 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: -0.2222 S13: 0.3975 REMARK 3 S21: 0.2423 S22: -0.0052 S23: 0.3708 REMARK 3 S31: -0.0523 S32: -0.3963 S33: 0.0541 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 114 B 297 REMARK 3 ORIGIN FOR THE GROUP (A): -27.5432 -17.8957 -69.8049 REMARK 3 T TENSOR REMARK 3 T11: 0.0493 T22: 0.0262 REMARK 3 T33: 0.0292 T12: -0.0341 REMARK 3 T13: -0.0334 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 2.1044 L22: 3.5404 REMARK 3 L33: 2.4285 L12: -0.2901 REMARK 3 L13: -0.1422 L23: -0.5090 REMARK 3 S TENSOR REMARK 3 S11: 0.0421 S12: 0.1662 S13: 0.1657 REMARK 3 S21: -0.2352 S22: 0.0485 S23: 0.1477 REMARK 3 S31: -0.0807 S32: -0.1193 S33: -0.0906 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2BUJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1290024486. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.984 REMARK 200 MONOCHROMATOR : SILICON MONOCHROMATORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35446 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 64.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.830 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.12 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 NL SITTING DROP, 1.1 AMMONIUM REMARK 280 SULFATE, 1% PEG3350, 0.1 M BIS-TRIS PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.86450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.86450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.27700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 84.45050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.27700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 84.45050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.86450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.27700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 84.45050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.86450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.27700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 84.45050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ARG 18 TO HIS REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ARG 18 TO HIS REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ARG 265 TO TRP REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ARG 265 TO TRP REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 SER A 0 REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 ARG A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 LEU A 253 REMARK 465 SER A 254 REMARK 465 GLN A 300 REMARK 465 HIS A 301 REMARK 465 THR A 302 REMARK 465 THR A 303 REMARK 465 GLN A 304 REMARK 465 ILE A 305 REMARK 465 LEU A 306 REMARK 465 MET B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 SER B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 88 REMARK 465 GLY B 89 REMARK 465 ALA B 90 REMARK 465 LYS B 91 REMARK 465 SER B 254 REMARK 465 ILE B 255 REMARK 465 PRO B 256 REMARK 465 GLN B 257 REMARK 465 PRO B 298 REMARK 465 GLY B 299 REMARK 465 GLN B 300 REMARK 465 HIS B 301 REMARK 465 THR B 302 REMARK 465 THR B 303 REMARK 465 GLN B 304 REMARK 465 ILE B 305 REMARK 465 LEU B 306 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 5 CG OD1 ND2 REMARK 470 GLN A 9 CD OE1 NE2 REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 GLU A 61 CD OE1 OE2 REMARK 470 LYS A 91 CD CE NZ REMARK 470 LYS A 102 CE NZ REMARK 470 ARG A 112 CZ NH1 NH2 REMARK 470 LYS A 114 CD CE NZ REMARK 470 LYS A 116 CD CE NZ REMARK 470 ASP A 158 CG OD1 OD2 REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 GLN A 172 CG CD OE1 NE2 REMARK 470 MET A 237 CG SD CE REMARK 470 GLN A 240 CG CD OE1 NE2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 ASP A 243 CG OD1 OD2 REMARK 470 GLN A 250 CG CD OE1 NE2 REMARK 470 ASN A 251 CG OD1 ND2 REMARK 470 GLN A 252 CG CD OE1 NE2 REMARK 470 ILE A 255 CG1 CG2 CD1 REMARK 470 GLN B 9 CD OE1 NE2 REMARK 470 LYS B 18 NZ REMARK 470 LYS B 25 CG CD CE NZ REMARK 470 HIS B 54 ND1 CD2 CE1 NE2 REMARK 470 GLU B 55 CG CD OE1 OE2 REMARK 470 GLN B 57 CG CD OE1 NE2 REMARK 470 ARG B 59 NE CZ NH1 NH2 REMARK 470 GLU B 60 CD OE1 OE2 REMARK 470 ARG B 64 NE CZ NH1 NH2 REMARK 470 LYS B 116 CE NZ REMARK 470 GLU B 159 CD OE1 OE2 REMARK 470 GLU B 178 CG CD OE1 OE2 REMARK 470 ARG B 181 NE CZ NH1 NH2 REMARK 470 MET B 237 CG SD CE REMARK 470 LYS B 241 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 174 CB CYS B 174 SG -0.110 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 147 -8.20 80.14 REMARK 500 ASP A 148 45.06 -141.12 REMARK 500 ASP A 166 77.23 61.93 REMARK 500 ASP A 213 -165.09 -115.68 REMARK 500 PRO A 259 27.18 -63.17 REMARK 500 MET A 273 47.49 -91.05 REMARK 500 ARG B 147 -4.76 75.79 REMARK 500 ASP B 166 67.15 64.04 REMARK 500 HIS B 176 107.76 -48.38 REMARK 500 PRO B 259 -0.03 -46.49 REMARK 500 MET B 273 51.53 -90.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU A1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU A1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU B1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU B1300 REMARK 999 REMARK 999 SEQUENCE REMARK 999 MUTATION R18H AND R265W DBREF 2BUJ A -10 12 PDB 2BUJ 2BUJ -10 12 DBREF 2BUJ A 13 305 UNP O75716 STK16_HUMAN 12 304 DBREF 2BUJ A 306 306 PDB 2BUJ 2BUJ 306 306 DBREF 2BUJ B -10 12 PDB 2BUJ 2BUJ -10 12 DBREF 2BUJ B 13 305 UNP O75716 STK16_HUMAN 12 304 DBREF 2BUJ B 306 306 PDB 2BUJ 2BUJ 306 306 SEQADV 2BUJ HIS A 19 UNP O75716 ARG 18 ENGINEERED MUTATION SEQADV 2BUJ TRP A 266 UNP O75716 ARG 265 ENGINEERED MUTATION SEQADV 2BUJ HIS B 19 UNP O75716 ARG 18 ENGINEERED MUTATION SEQADV 2BUJ TRP B 266 UNP O75716 ARG 265 ENGINEERED MUTATION SEQRES 1 A 317 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 317 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET VAL ILE ILE SEQRES 3 A 317 ASP ASN LYS HIS TYR LEU PHE ILE GLN LYS LEU GLY GLU SEQRES 4 A 317 GLY GLY PHE SER TYR VAL ASP LEU VAL GLU GLY LEU HIS SEQRES 5 A 317 ASP GLY HIS PHE TYR ALA LEU LYS ARG ILE LEU CYS HIS SEQRES 6 A 317 GLU GLN GLN ASP ARG GLU GLU ALA GLN ARG GLU ALA ASP SEQRES 7 A 317 MET HIS ARG LEU PHE ASN HIS PRO ASN ILE LEU ARG LEU SEQRES 8 A 317 VAL ALA TYR CYS LEU ARG GLU ARG GLY ALA LYS HIS GLU SEQRES 9 A 317 ALA TRP LEU LEU LEU PRO PHE PHE LYS ARG GLY THR LEU SEQRES 10 A 317 TRP ASN GLU ILE GLU ARG LEU LYS ASP LYS GLY ASN PHE SEQRES 11 A 317 LEU THR GLU ASP GLN ILE LEU TRP LEU LEU LEU GLY ILE SEQRES 12 A 317 CYS ARG GLY LEU GLU ALA ILE HIS ALA LYS GLY TYR ALA SEQRES 13 A 317 HIS ARG ASP LEU LYS PRO THR ASN ILE LEU LEU GLY ASP SEQRES 14 A 317 GLU GLY GLN PRO VAL LEU MET ASP LEU GLY SER MET ASN SEQRES 15 A 317 GLN ALA CYS ILE HIS VAL GLU GLY SER ARG GLN ALA LEU SEQRES 16 A 317 THR LEU GLN ASP TRP ALA ALA GLN ARG CYS THR ILE SER SEQRES 17 A 317 TYR ARG ALA PRO GLU LEU PHE SER VAL GLN SER HIS CYS SEQRES 18 A 317 VAL ILE ASP GLU ARG THR ASP VAL TRP SER LEU GLY CYS SEQRES 19 A 317 VAL LEU TYR ALA MET MET PHE GLY GLU GLY PRO TYR ASP SEQRES 20 A 317 MET VAL PHE GLN LYS GLY ASP SER VAL ALA LEU ALA VAL SEQRES 21 A 317 GLN ASN GLN LEU SER ILE PRO GLN SER PRO ARG HIS SER SEQRES 22 A 317 SER ALA LEU TRP GLN LEU LEU ASN SER MET MET THR VAL SEQRES 23 A 317 ASP PRO HIS GLN ARG PRO HIS ILE PRO LEU LEU LEU SER SEQRES 24 A 317 GLN LEU GLU ALA LEU GLN PRO PRO ALA PRO GLY GLN HIS SEQRES 25 A 317 THR THR GLN ILE LEU SEQRES 1 B 317 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 317 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET VAL ILE ILE SEQRES 3 B 317 ASP ASN LYS HIS TYR LEU PHE ILE GLN LYS LEU GLY GLU SEQRES 4 B 317 GLY GLY PHE SER TYR VAL ASP LEU VAL GLU GLY LEU HIS SEQRES 5 B 317 ASP GLY HIS PHE TYR ALA LEU LYS ARG ILE LEU CYS HIS SEQRES 6 B 317 GLU GLN GLN ASP ARG GLU GLU ALA GLN ARG GLU ALA ASP SEQRES 7 B 317 MET HIS ARG LEU PHE ASN HIS PRO ASN ILE LEU ARG LEU SEQRES 8 B 317 VAL ALA TYR CYS LEU ARG GLU ARG GLY ALA LYS HIS GLU SEQRES 9 B 317 ALA TRP LEU LEU LEU PRO PHE PHE LYS ARG GLY THR LEU SEQRES 10 B 317 TRP ASN GLU ILE GLU ARG LEU LYS ASP LYS GLY ASN PHE SEQRES 11 B 317 LEU THR GLU ASP GLN ILE LEU TRP LEU LEU LEU GLY ILE SEQRES 12 B 317 CYS ARG GLY LEU GLU ALA ILE HIS ALA LYS GLY TYR ALA SEQRES 13 B 317 HIS ARG ASP LEU LYS PRO THR ASN ILE LEU LEU GLY ASP SEQRES 14 B 317 GLU GLY GLN PRO VAL LEU MET ASP LEU GLY SER MET ASN SEQRES 15 B 317 GLN ALA CYS ILE HIS VAL GLU GLY SER ARG GLN ALA LEU SEQRES 16 B 317 THR LEU GLN ASP TRP ALA ALA GLN ARG CYS THR ILE SER SEQRES 17 B 317 TYR ARG ALA PRO GLU LEU PHE SER VAL GLN SER HIS CYS SEQRES 18 B 317 VAL ILE ASP GLU ARG THR ASP VAL TRP SER LEU GLY CYS SEQRES 19 B 317 VAL LEU TYR ALA MET MET PHE GLY GLU GLY PRO TYR ASP SEQRES 20 B 317 MET VAL PHE GLN LYS GLY ASP SER VAL ALA LEU ALA VAL SEQRES 21 B 317 GLN ASN GLN LEU SER ILE PRO GLN SER PRO ARG HIS SER SEQRES 22 B 317 SER ALA LEU TRP GLN LEU LEU ASN SER MET MET THR VAL SEQRES 23 B 317 ASP PRO HIS GLN ARG PRO HIS ILE PRO LEU LEU LEU SER SEQRES 24 B 317 GLN LEU GLU ALA LEU GLN PRO PRO ALA PRO GLY GLN HIS SEQRES 25 B 317 THR THR GLN ILE LEU HET CL A1300 1 HET STU A1301 35 HET STU A1302 35 HET CL B1298 1 HET STU B1299 35 HET STU B1300 35 HETNAM CL CHLORIDE ION HETNAM STU STAUROSPORINE FORMUL 3 CL 2(CL 1-) FORMUL 4 STU 4(C28 H26 N4 O3) FORMUL 9 HOH *76(H2 O) HELIX 1 1 GLU A 55 LEU A 71 1 17 HELIX 2 2 THR A 105 ASP A 115 1 11 HELIX 3 3 THR A 121 LYS A 142 1 22 HELIX 4 4 LYS A 150 THR A 152 5 3 HELIX 5 5 GLY A 179 CYS A 194 1 16 HELIX 6 6 THR A 195 ARG A 199 5 5 HELIX 7 7 ALA A 200 PHE A 204 5 5 HELIX 8 8 GLU A 214 GLY A 231 1 18 HELIX 9 9 TYR A 235 LYS A 241 1 7 HELIX 10 10 SER A 244 ASN A 251 1 8 HELIX 11 11 SER A 262 MET A 273 1 12 HELIX 12 12 ASP A 276 ARG A 280 5 5 HELIX 13 13 HIS A 282 LEU A 293 1 12 HELIX 14 14 GLU B 55 LEU B 71 1 17 HELIX 15 15 THR B 105 ASP B 115 1 11 HELIX 16 16 THR B 121 LYS B 142 1 22 HELIX 17 17 LYS B 150 THR B 152 5 3 HELIX 18 18 GLY B 179 CYS B 194 1 16 HELIX 19 19 THR B 195 ARG B 199 5 5 HELIX 20 20 ALA B 200 PHE B 204 5 5 HELIX 21 21 GLU B 214 GLY B 231 1 18 HELIX 22 22 TYR B 235 LYS B 241 1 7 HELIX 23 23 SER B 244 ASN B 251 1 8 HELIX 24 24 SER B 262 MET B 273 1 12 HELIX 25 25 ASP B 276 ARG B 280 5 5 HELIX 26 26 HIS B 282 GLN B 294 1 13 SHEET 1 AA12 ALA A 82 ARG A 88 0 SHEET 2 AA12 LYS A 91 PRO A 99 -1 O LYS A 91 N ARG A 88 SHEET 3 AA12 PHE A 45 CYS A 53 -1 O ALA A 47 N LEU A 98 SHEET 4 AA12 SER A 32 GLY A 39 -1 O TYR A 33 N ARG A 50 SHEET 5 AA12 LYS A 18 GLY A 27 -1 O LEU A 21 N GLU A 38 SHEET 6 AA12 PHE A 8 ILE A 15 -1 O HIS A 11 N PHE A 22 SHEET 7 AA12 PHE B 8 ILE B 15 -1 O PHE B 8 N MET A 12 SHEET 8 AA12 LYS B 18 GLU B 28 -1 O LYS B 18 N ILE B 15 SHEET 9 AA12 SER B 32 GLY B 39 -1 O VAL B 34 N LEU B 26 SHEET 10 AA12 PHE B 45 LEU B 52 -1 O TYR B 46 N VAL B 37 SHEET 11 AA12 GLU B 93 PRO B 99 -1 O ALA B 94 N ILE B 51 SHEET 12 AA12 ALA B 82 ARG B 86 -1 O ALA B 82 N LEU B 97 SHEET 1 AB 2 TYR A 144 ALA A 145 0 SHEET 2 AB 2 ASN A 171 GLN A 172 -1 O ASN A 171 N ALA A 145 SHEET 1 AC 2 ILE A 154 LEU A 156 0 SHEET 2 AC 2 PRO A 162 LEU A 164 -1 O VAL A 163 N LEU A 155 SHEET 1 AD 2 ILE A 175 GLU A 178 0 SHEET 2 AD 2 HIS A 209 ILE A 212 -1 O CYS A 210 N VAL A 177 SHEET 1 BA 2 TYR B 144 ALA B 145 0 SHEET 2 BA 2 ASN B 171 GLN B 172 -1 O ASN B 171 N ALA B 145 SHEET 1 BB 2 ILE B 154 LEU B 156 0 SHEET 2 BB 2 PRO B 162 LEU B 164 -1 O VAL B 163 N LEU B 155 SHEET 1 BC 2 ILE B 175 GLU B 178 0 SHEET 2 BC 2 HIS B 209 ILE B 212 -1 O CYS B 210 N VAL B 177 CISPEP 1 GLN B 294 PRO B 295 0 -16.33 SITE 1 AC1 2 ARG A 59 STU A1302 SITE 1 AC2 2 GLY B 30 SER B 32 SITE 1 AC3 8 LEU A 26 GLU A 28 VAL A 34 ALA A 47 SITE 2 AC3 8 PRO A 99 PHE A 100 PHE A 101 MET A 165 SITE 1 AC4 5 GLU A 87 HIS A 92 CL A1300 GLN B 24 SITE 2 AC4 5 STU B1300 SITE 1 AC5 9 LEU B 26 GLY B 27 GLU B 28 ALA B 47 SITE 2 AC5 9 PRO B 99 PHE B 100 PHE B 101 MET B 165 SITE 3 AC5 9 STU B1300 SITE 1 AC6 11 HIS A 54 GLU A 55 STU A1302 GLN B 24 SITE 2 AC6 11 LEU B 26 PHE B 45 PHE B 100 LYS B 102 SITE 3 AC6 11 ARG B 103 GLY B 104 STU B1299 CRYST1 104.554 168.901 129.729 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007708 0.00000 MTRIX1 1 -0.775470 0.631330 0.008320 -24.64208 1 MTRIX2 1 0.598730 0.731100 0.327140 16.92329 1 MTRIX3 1 0.200450 0.258670 -0.944940 -47.67651 1