HEADER IMMUNE SYSTEM 18-AUG-05 2BZM TITLE SOLUTION STRUCTURE OF THE PRIMARY HOST RECOGNITION REGION OF TITLE 2 COMPLEMENT FACTOR H COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT FACTOR H; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CCPS 19-20, RESIDUES 1107-1231; COMPND 5 SYNONYM: H FACTOR 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PPICZALPHAA KEYWDS IMMUNE SYSTEM, FACTOR H, COMPLEMENT, HUS, HEPARIN, POLYANIONS, IMMUNE KEYWDS 2 RESPONSE, INNATE IMMUNITY, COMPLEMENT ALTERNATE PATHWAY EXPDTA SOLUTION NMR NUMMDL 26 AUTHOR A.P.HERBERT,D.UHRIN,M.LYON,M.K.PANGBURN,P.N.BARLOW REVDAT 4 20-NOV-24 2BZM 1 REMARK REVDAT 3 24-FEB-09 2BZM 1 VERSN REVDAT 2 14-JUN-06 2BZM 1 JRNL REVDAT 1 22-MAR-06 2BZM 0 JRNL AUTH A.P.HERBERT,D.UHRIN,M.LYON,M.K.PANGBURN,P.N.BARLOW JRNL TITL DISEASE-ASSOCIATED SEQUENCE VARIATIONS CONGREGATE IN A JRNL TITL 2 POLYANION RECOGNITION PATCH ON HUMAN FACTOR H REVEALED IN JRNL TITL 3 THREE-DIMENSIONAL STRUCTURE. JRNL REF J.BIOL.CHEM. V. 281 16512 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16533809 JRNL DOI 10.1074/JBC.M513611200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2BZM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1290025361. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310.0 REMARK 210 PH : 4.0 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : 1.0 ATM REMARK 210 SAMPLE CONTENTS : 10% WATER/90% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D-15N-HSQC-NOESY; 3D-13C- HSQC REMARK 210 -NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AM REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ANSIG REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 26 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST OVERALL ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED FACTOR H CCP MODULES 19-20 REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD2 TYR A 1205 H LYS A 1230 1.31 REMARK 500 H ASN A 1147 HB3 PRO A 1161 1.31 REMARK 500 HB3 LYS A 1230 H ARG A 1231 1.32 REMARK 500 HB2 PRO A 1112 HH TYR A 1136 1.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A1116 88.91 -65.73 REMARK 500 1 ASP A1119 166.74 160.51 REMARK 500 1 THR A1121 5.20 -69.71 REMARK 500 1 SER A1122 -94.42 -125.96 REMARK 500 1 PRO A1124 133.15 -32.41 REMARK 500 1 ASN A1140 -158.46 48.66 REMARK 500 1 LEU A1144 -163.18 -69.25 REMARK 500 1 GLU A1145 129.51 -171.70 REMARK 500 1 TRP A1157 -170.61 -57.08 REMARK 500 1 SER A1158 -156.41 -116.29 REMARK 500 1 PRO A1160 171.53 -51.44 REMARK 500 1 PRO A1161 -126.08 -63.98 REMARK 500 1 PRO A1166 -179.84 -56.67 REMARK 500 1 GLU A1175 5.86 -69.16 REMARK 500 1 ASN A1176 -77.49 -87.62 REMARK 500 1 ASN A1178 45.13 177.79 REMARK 500 1 ALA A1180 -146.90 -146.14 REMARK 500 1 THR A1184 78.77 45.27 REMARK 500 1 ALA A1185 34.85 -142.76 REMARK 500 1 LYS A1186 106.07 68.24 REMARK 500 1 GLN A1187 -96.45 70.11 REMARK 500 1 THR A1193 113.29 -34.80 REMARK 500 1 LYS A1202 101.69 56.71 REMARK 500 1 ARG A1203 100.48 -23.11 REMARK 500 1 LEU A1207 131.23 -32.19 REMARK 500 1 SER A1209 -54.32 75.36 REMARK 500 1 HIS A1212 -96.98 -96.12 REMARK 500 1 THR A1216 -159.90 -157.59 REMARK 500 1 TRP A1219 140.13 -171.60 REMARK 500 1 ASP A1220 19.78 47.31 REMARK 500 1 GLU A1224 71.67 53.57 REMARK 500 1 PRO A1226 -142.06 -68.46 REMARK 500 1 THR A1227 -58.87 -153.72 REMARK 500 1 CYS A1228 151.61 62.85 REMARK 500 1 LYS A1230 -112.51 166.45 REMARK 500 2 ALA A1104 -82.75 62.68 REMARK 500 2 PRO A1114 -152.68 -100.08 REMARK 500 2 ASP A1116 30.61 -79.15 REMARK 500 2 ASN A1117 8.04 -161.64 REMARK 500 2 ASP A1119 176.91 163.02 REMARK 500 2 SER A1122 -84.86 -149.61 REMARK 500 2 LEU A1125 -165.19 -114.53 REMARK 500 2 SER A1126 -40.61 -147.46 REMARK 500 2 ASN A1140 -155.07 46.71 REMARK 500 2 ASN A1147 95.60 -68.57 REMARK 500 2 PRO A1161 -72.79 -49.77 REMARK 500 2 LEU A1164 102.91 -58.65 REMARK 500 2 CYS A1167 73.71 -66.99 REMARK 500 2 VAL A1168 89.11 -63.40 REMARK 500 2 TYR A1177 35.23 -80.34 REMARK 500 REMARK 500 THIS ENTRY HAS 931 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FHC RELATED DB: PDB REMARK 900 C3D AND HEPARIN BINDING COMPLEMENT FACTOR H DOMAINS SCR19-20 REMARK 900 RELATED ID: 1HAQ RELATED DB: PDB REMARK 900 FOUR MODELS OF HUMAN FACTOR H DETERMINED BY SOLUTION SCATTERING REMARK 900 CURVE-FITTING AND HOMOLOGY MODELLING REMARK 900 RELATED ID: 1HCC RELATED DB: PDB REMARK 900 RELATED ID: 1HFH RELATED DB: PDB REMARK 900 FACTOR H, 15TH AND 16TH C-MODULE PAIR (NMR, MINIMIZED AVERAGED REMARK 900 STRUCTURE) REMARK 900 RELATED ID: 1HFI RELATED DB: PDB REMARK 900 FACTOR H, 15TH C-MODULE PAIR (NMR, MINIMIZED AVERAGED STRUCTURE) REMARK 900 RELATED ID: 1KOV RELATED DB: PDB REMARK 900 HOMOLOGY MODEL OF HUMAN FACTOR H SCRS 6 AND 7 DBREF 2BZM A 1103 1106 PDB 2BZM 2BZM 1103 1106 DBREF 2BZM A 1107 1231 UNP P08603 CFAH_HUMAN 1107 1231 SEQRES 1 A 129 GLU ALA GLU PHE GLY LYS CYS GLY PRO PRO PRO PRO ILE SEQRES 2 A 129 ASP ASN GLY ASP ILE THR SER PHE PRO LEU SER VAL TYR SEQRES 3 A 129 ALA PRO ALA SER SER VAL GLU TYR GLN CYS GLN ASN LEU SEQRES 4 A 129 TYR GLN LEU GLU GLY ASN LYS ARG ILE THR CYS ARG ASN SEQRES 5 A 129 GLY GLN TRP SER GLU PRO PRO LYS CYS LEU HIS PRO CYS SEQRES 6 A 129 VAL ILE SER ARG GLU ILE MET GLU ASN TYR ASN ILE ALA SEQRES 7 A 129 LEU ARG TRP THR ALA LYS GLN LYS LEU TYR SER ARG THR SEQRES 8 A 129 GLY GLU SER VAL GLU PHE VAL CYS LYS ARG GLY TYR ARG SEQRES 9 A 129 LEU SER SER ARG SER HIS THR LEU ARG THR THR CYS TRP SEQRES 10 A 129 ASP GLY LYS LEU GLU TYR PRO THR CYS ALA LYS ARG HELIX 1 1 ILE A 1173 ASN A 1178 1 6 SHEET 1 AA 2 GLY A1118 ILE A1120 0 SHEET 2 AA 2 TYR A1136 CYS A1138 -1 O GLN A1137 N ASP A1119 SHEET 1 AB 2 SER A1133 VAL A1134 0 SHEET 2 AB 2 ILE A1150 THR A1151 -1 O ILE A1150 N VAL A1134 SHEET 1 AC 2 GLN A1143 GLU A1145 0 SHEET 2 AC 2 LYS A1162 LEU A1164 -1 O LYS A1162 N GLU A1145 SHEET 1 AD 2 CYS A1167 VAL A1168 0 SHEET 2 AD 2 TYR A1190 SER A1191 -1 O SER A1191 N CYS A1167 SHEET 1 AE 3 ALA A1180 LEU A1181 0 SHEET 2 AE 3 SER A1196 VAL A1200 -1 O VAL A1200 N ALA A1180 SHEET 3 AE 3 ARG A1215 THR A1217 -1 O THR A1216 N VAL A1197 SHEET 1 AF 2 TYR A1205 ARG A1206 0 SHEET 2 AF 2 ALA A1229 LYS A1230 -1 O ALA A1229 N ARG A1206 SSBOND 1 CYS A 1109 CYS A 1152 1555 1555 2.03 SSBOND 2 CYS A 1138 CYS A 1163 1555 1555 2.03 SSBOND 3 CYS A 1167 CYS A 1218 1555 1555 2.03 SSBOND 4 CYS A 1201 CYS A 1228 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MODEL 16 ENDMDL MODEL 17 ENDMDL MODEL 18 ENDMDL MODEL 19 ENDMDL MODEL 20 ENDMDL MODEL 21 ENDMDL MODEL 22 ENDMDL MODEL 23 ENDMDL MODEL 24 ENDMDL MODEL 25 ENDMDL MODEL 26 ENDMDL CONECT 97 736 CONECT 504 908 CONECT 736 97 CONECT 908 504 CONECT 969 1821 CONECT 1534 1979 CONECT 1821 969 CONECT 1979 1534 MASTER 164 0 0 1 13 0 0 6 1034 1 8 10 END