HEADER IMMUNE SYSTEM 19-SEP-05 2C1O TITLE ENAIIHIS FAB FRAGMENT IN THE FREE FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGK-C PROTEIN; COMPND 3 CHAIN: A, L; COMPND 4 SYNONYM: ENA11HIS ANTIBODY; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: IGH-4 PROTEIN; COMPND 8 CHAIN: B, H; COMPND 9 FRAGMENT: FAB-FRAGMENT; COMPND 10 SYNONYM: ENA11HIS ANTIBODY; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: RV308; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_TAXID: 10090; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: RV308 KEYWDS FAB FRAGMENT, ENANTIOSELECTIVE, FINROZOLE, IMMUNE SYSTEM, ANTIBODY, KEYWDS 2 ENA11HIS ANTIBODY, IMMUNOGLOBULIN DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR T.PARKKINEN,T.K.NEVANEN,A.KOIVULA,J.ROUVINEN REVDAT 6 13-NOV-24 2C1O 1 REMARK REVDAT 5 13-DEC-23 2C1O 1 REMARK REVDAT 4 24-JUL-19 2C1O 1 REMARK REVDAT 3 24-FEB-09 2C1O 1 VERSN REVDAT 2 08-MAR-06 2C1O 1 JRNL REVDAT 1 25-JAN-06 2C1O 0 JRNL AUTH T.PARKKINEN,T.K.NEVANEN,A.KOIVULA,J.ROUVINEN JRNL TITL CRYSTAL STRUCTURES OF AN ENANTIOSELECTIVE FAB-FRAGMENT IN JRNL TITL 2 FREE AND COMPLEX FORMS. JRNL REF J.MOL.BIOL. V. 357 471 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16427081 JRNL DOI 10.1016/J.JMB.2005.12.045 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 23179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2287 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6656 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 192 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.77400 REMARK 3 B22 (A**2) : -10.90200 REMARK 3 B33 (A**2) : 13.67600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.456 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.29 REMARK 3 BSOL : 24.10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : LISA.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2C1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1290025689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.81220 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23952 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1F8T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG3350, 0.1 M HEPES, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.90250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.72050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.34000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.72050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.90250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.34000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A -36 REMARK 465 GLN A -35 REMARK 465 LEU A -34 REMARK 465 GLN A -33 REMARK 465 GLN A -32 REMARK 465 SER A -31 REMARK 465 GLY A -30 REMARK 465 ALA A -29 REMARK 465 GLU A -28 REMARK 465 LEU A -27 REMARK 465 VAL A -26 REMARK 465 ARG A -25 REMARK 465 PRO A -24 REMARK 465 GLY A -23 REMARK 465 THR A -22 REMARK 465 SER A -21 REMARK 465 VAL A -20 REMARK 465 LYS A -19 REMARK 465 LEU A -18 REMARK 465 SER A -17 REMARK 465 CYS A -16 REMARK 465 LYS A -15 REMARK 465 ALA A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 TYR A -11 REMARK 465 SER A -10 REMARK 465 PHE A -9 REMARK 465 THR A -8 REMARK 465 ASN A -7 REMARK 465 TYR A -6 REMARK 465 TRP A -5 REMARK 465 MET A -4 REMARK 465 ASN A -3 REMARK 465 TRP A -2 REMARK 465 LEU A -1 REMARK 465 ARG A 0 REMARK 465 VAL L -36 REMARK 465 GLN L -35 REMARK 465 LEU L -34 REMARK 465 GLN L -33 REMARK 465 GLN L -32 REMARK 465 SER L -31 REMARK 465 GLY L -30 REMARK 465 ALA L -29 REMARK 465 GLU L -28 REMARK 465 LEU L -27 REMARK 465 VAL L -26 REMARK 465 ARG L -25 REMARK 465 PRO L -24 REMARK 465 GLY L -23 REMARK 465 THR L -22 REMARK 465 SER L -21 REMARK 465 VAL L -20 REMARK 465 LYS L -19 REMARK 465 LEU L -18 REMARK 465 SER L -17 REMARK 465 CYS L -16 REMARK 465 LYS L -15 REMARK 465 ALA L -14 REMARK 465 SER L -13 REMARK 465 GLY L -12 REMARK 465 TYR L -11 REMARK 465 SER L -10 REMARK 465 PHE L -9 REMARK 465 THR L -8 REMARK 465 ASN L -7 REMARK 465 TYR L -6 REMARK 465 TRP L -5 REMARK 465 MET L -4 REMARK 465 ASN L -3 REMARK 465 TRP L -2 REMARK 465 LEU L -1 REMARK 465 ARG L 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS B 215 CA C O CB SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 22 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 15 124.46 -38.24 REMARK 500 ASN A 28 -113.28 -80.80 REMARK 500 VAL A 51 -47.19 60.78 REMARK 500 ASP A 60 10.57 -64.57 REMARK 500 ARG A 108 -165.03 -164.35 REMARK 500 ALA A 130 113.71 -165.14 REMARK 500 ASN A 138 54.59 39.63 REMARK 500 ASP A 151 -88.75 51.20 REMARK 500 GLN A 156 24.37 -148.65 REMARK 500 THR B 16 -127.52 -117.10 REMARK 500 SER B 55 15.03 57.77 REMARK 500 SER B 76 49.46 37.56 REMARK 500 ALA B 88 -178.73 179.53 REMARK 500 ASP B 98 17.38 -64.41 REMARK 500 SER B 128 24.53 -178.73 REMARK 500 ALA B 130 108.12 -24.35 REMARK 500 GLN B 131 -51.27 62.95 REMARK 500 THR B 132 -31.79 70.04 REMARK 500 ASN B 133 -86.44 177.83 REMARK 500 SER B 134 -43.21 -146.84 REMARK 500 PHE B 146 133.80 179.86 REMARK 500 PRO B 149 -163.72 -104.70 REMARK 500 ASN B 155 61.19 39.07 REMARK 500 SER B 156 28.09 41.93 REMARK 500 ASP B 173 -19.78 68.31 REMARK 500 LYS B 205 113.13 -161.76 REMARK 500 ASP B 214 93.55 -51.19 REMARK 500 PHE H 29 176.65 -58.58 REMARK 500 THR H 30 0.85 55.69 REMARK 500 PRO H 41 -92.32 -25.23 REMARK 500 SER H 53 -79.09 -64.56 REMARK 500 ASP H 65 47.80 -86.69 REMARK 500 LYS H 66 -43.29 -150.68 REMARK 500 SER H 82B 67.58 29.15 REMARK 500 ASP H 86 -23.97 -37.91 REMARK 500 ALA H 88 -158.63 -172.54 REMARK 500 TYR H 97 -35.51 -29.68 REMARK 500 TRP H 103 -164.70 -102.34 REMARK 500 SER H 112 136.61 -175.66 REMARK 500 SER H 128 -91.43 -148.20 REMARK 500 ALA H 129 -136.05 -67.83 REMARK 500 ALA H 130 -25.86 67.80 REMARK 500 SER H 134 -17.38 78.48 REMARK 500 PHE H 146 136.14 -172.79 REMARK 500 ALA H 201 -24.26 -36.75 REMARK 500 PRO H 212 -163.28 -73.67 REMARK 500 ARG H 213 -103.08 167.91 REMARK 500 ASP H 214 137.14 63.05 REMARK 500 SER L 12 58.60 -92.69 REMARK 500 VAL L 13 -171.32 -56.93 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.30 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AFV RELATED DB: PDB REMARK 900 HIV-1 CAPSID PROTEIN (P24) COMPLEX WITH FAB25.3 DBREF 2C1O A -36 212 PDB 2C1O 2C1O -36 212 DBREF 2C1O B 1 215 PDB 2C1O 2C1O 1 215 DBREF 2C1O L -36 212 PDB 2C1O 2C1O -36 212 DBREF 2C1O H 1 215 PDB 2C1O 2C1O 1 215 SEQRES 1 A 254 VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL ARG PRO SEQRES 2 A 254 GLY THR SER VAL LYS LEU SER CYS LYS ALA SER GLY TYR SEQRES 3 A 254 SER PHE THR ASN TYR TRP MET ASN TRP LEU ARG GLU LEU SEQRES 4 A 254 VAL MET THR GLN SER PRO LEU THR LEU SER VAL THR ILE SEQRES 5 A 254 GLY GLN PRO ALA SER ILE SER CYS LYS SER SER GLN SER SEQRES 6 A 254 LEU LEU TYR SER ASN GLY LYS THR TYR LEU ASN TRP LEU SEQRES 7 A 254 LEU GLN ARG PRO GLY GLN SER PRO LYS ARG LEU ILE TYR SEQRES 8 A 254 LEU VAL SER LYS LEU ASP SER GLY ASP PRO ASP ARG PHE SEQRES 9 A 254 THR GLY SER GLY SER GLY THR ASP PHE THR LEU LYS ILE SEQRES 10 A 254 SER ARG VAL GLU ALA GLU ASP LEU GLY ILE TYR TYR CYS SEQRES 11 A 254 VAL GLN GLY SER HIS PHE PRO PRO THR PHE GLY ALA GLY SEQRES 12 A 254 THR LYS LEU GLU LEU LYS ARG ALA ASP ALA ALA PRO THR SEQRES 13 A 254 VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU THR SER SEQRES 14 A 254 GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN PHE TYR SEQRES 15 A 254 PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP GLY SER SEQRES 16 A 254 GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR ASP GLN SEQRES 17 A 254 ASP SER LYS ASP SER THR TYR SER MET SER SER THR LEU SEQRES 18 A 254 THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SER TYR SEQRES 19 A 254 THR CYS GLU ALA THR HIS LYS THR SER THR SER PRO ILE SEQRES 20 A 254 VAL LYS SER PHE ASN ARG ASN SEQRES 1 B 218 GLU VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL ARG SEQRES 2 B 218 PRO GLY THR SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 B 218 TYR SER PHE THR ASN TYR TRP MET ASN TRP LEU ARG GLN SEQRES 4 B 218 ARG PRO GLY GLN GLY LEU ASP TRP ILE GLY MET ILE HIS SEQRES 5 B 218 PRO SER ASP SER GLU THR ARG LEU ASN GLN LYS PHE LYS SEQRES 6 B 218 ASP LYS ALA THR LEU THR VAL ASP ARG SER SER SER THR SEQRES 7 B 218 ALA TYR ILE GLN LEU SER SER PRO THR SER GLU ASP SER SEQRES 8 B 218 ALA VAL TYR TYR CYS ALA ARG ASP ASP TYR ASP GLY ALA SEQRES 9 B 218 PHE TRP GLY GLN GLY THR LEU VAL THR VAL SER ALA ALA SEQRES 10 B 218 LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA PRO GLY SEQRES 11 B 218 SER ALA ALA GLN THR ASN SER MET VAL THR LEU GLY CYS SEQRES 12 B 218 LEU VAL LYS GLY TYR PHE PRO ALA PRO VAL THR VAL THR SEQRES 13 B 218 TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR PHE SEQRES 14 B 218 PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SER SER SEQRES 15 B 218 SER VAL THR VAL PRO SER SER THR TRP PRO SER GLU THR SEQRES 16 B 218 VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 17 B 218 VAL ASP LYS LYS ILE VAL PRO ARG ASP CYS SEQRES 1 H 218 GLU VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL ARG SEQRES 2 H 218 PRO GLY THR SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 218 TYR SER PHE THR ASN TYR TRP MET ASN TRP LEU ARG GLN SEQRES 4 H 218 ARG PRO GLY GLN GLY LEU ASP TRP ILE GLY MET ILE HIS SEQRES 5 H 218 PRO SER ASP SER GLU THR ARG LEU ASN GLN LYS PHE LYS SEQRES 6 H 218 ASP LYS ALA THR LEU THR VAL ASP ARG SER SER SER THR SEQRES 7 H 218 ALA TYR ILE GLN LEU SER SER PRO THR SER GLU ASP SER SEQRES 8 H 218 ALA VAL TYR TYR CYS ALA ARG ASP ASP TYR ASP GLY ALA SEQRES 9 H 218 PHE TRP GLY GLN GLY THR LEU VAL THR VAL SER ALA ALA SEQRES 10 H 218 LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA PRO GLY SEQRES 11 H 218 SER ALA ALA GLN THR ASN SER MET VAL THR LEU GLY CYS SEQRES 12 H 218 LEU VAL LYS GLY TYR PHE PRO ALA PRO VAL THR VAL THR SEQRES 13 H 218 TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR PHE SEQRES 14 H 218 PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SER SER SEQRES 15 H 218 SER VAL THR VAL PRO SER SER THR TRP PRO SER GLU THR SEQRES 16 H 218 VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 17 H 218 VAL ASP LYS LYS ILE VAL PRO ARG ASP CYS SEQRES 1 L 254 VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL ARG PRO SEQRES 2 L 254 GLY THR SER VAL LYS LEU SER CYS LYS ALA SER GLY TYR SEQRES 3 L 254 SER PHE THR ASN TYR TRP MET ASN TRP LEU ARG GLU LEU SEQRES 4 L 254 VAL MET THR GLN SER PRO LEU THR LEU SER VAL THR ILE SEQRES 5 L 254 GLY GLN PRO ALA SER ILE SER CYS LYS SER SER GLN SER SEQRES 6 L 254 LEU LEU TYR SER ASN GLY LYS THR TYR LEU ASN TRP LEU SEQRES 7 L 254 LEU GLN ARG PRO GLY GLN SER PRO LYS ARG LEU ILE TYR SEQRES 8 L 254 LEU VAL SER LYS LEU ASP SER GLY ASP PRO ASP ARG PHE SEQRES 9 L 254 THR GLY SER GLY SER GLY THR ASP PHE THR LEU LYS ILE SEQRES 10 L 254 SER ARG VAL GLU ALA GLU ASP LEU GLY ILE TYR TYR CYS SEQRES 11 L 254 VAL GLN GLY SER HIS PHE PRO PRO THR PHE GLY ALA GLY SEQRES 12 L 254 THR LYS LEU GLU LEU LYS ARG ALA ASP ALA ALA PRO THR SEQRES 13 L 254 VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU THR SER SEQRES 14 L 254 GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN PHE TYR SEQRES 15 L 254 PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP GLY SER SEQRES 16 L 254 GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR ASP GLN SEQRES 17 L 254 ASP SER LYS ASP SER THR TYR SER MET SER SER THR LEU SEQRES 18 L 254 THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SER TYR SEQRES 19 L 254 THR CYS GLU ALA THR HIS LYS THR SER THR SER PRO ILE SEQRES 20 L 254 VAL LYS SER PHE ASN ARG ASN FORMUL 5 HOH *192(H2 O) HELIX 1 1 GLU A 79 LEU A 83 5 5 HELIX 2 2 SER A 121 SER A 127 1 7 HELIX 3 3 LYS A 183 ARG A 188 1 6 HELIX 4 4 SER B 28 TYR B 32 5 5 HELIX 5 5 GLN B 61 LYS B 64 5 4 HELIX 6 6 ARG B 73 SER B 75 5 3 HELIX 7 7 THR B 83 SER B 87 5 5 HELIX 8 8 SER B 156 SER B 158 5 3 HELIX 9 9 PRO B 200 SER B 203 5 4 HELIX 10 10 GLN H 61 LYS H 64 5 4 HELIX 11 11 ALA H 130 ASN H 133 5 4 HELIX 12 12 SER H 156 SER H 158 5 3 HELIX 13 13 PRO H 200 SER H 203 5 4 HELIX 14 14 GLU L 79 LEU L 83 5 5 HELIX 15 15 SER L 121 SER L 127 1 7 HELIX 16 16 LYS L 183 ARG L 188 1 6 SHEET 1 AA 4 MET A 4 SER A 7 0 SHEET 2 AA 4 ALA A 19 SER A 25 -1 O SER A 22 N SER A 7 SHEET 3 AA 4 ASP A 70 ILE A 75 -1 O PHE A 71 N CYS A 23 SHEET 4 AA 4 PHE A 62 SER A 67 -1 O THR A 63 N LYS A 74 SHEET 1 AB 6 THR A 10 VAL A 13 0 SHEET 2 AB 6 THR A 102 LEU A 106 1 O LYS A 103 N LEU A 11 SHEET 3 AB 6 ILE A 85 GLN A 90 -1 O TYR A 86 N THR A 102 SHEET 4 AB 6 LEU A 33 GLN A 38 -1 O ASN A 34 N VAL A 89 SHEET 5 AB 6 LYS A 45 TYR A 49 -1 O LYS A 45 N LEU A 37 SHEET 6 AB 6 LYS A 53 LEU A 54 -1 O LYS A 53 N TYR A 49 SHEET 1 AC 4 THR A 10 VAL A 13 0 SHEET 2 AC 4 THR A 102 LEU A 106 1 O LYS A 103 N LEU A 11 SHEET 3 AC 4 ILE A 85 GLN A 90 -1 O TYR A 86 N THR A 102 SHEET 4 AC 4 THR A 97 PHE A 98 -1 O THR A 97 N GLN A 90 SHEET 1 AD 4 THR A 114 PHE A 118 0 SHEET 2 AD 4 GLY A 129 PHE A 139 -1 O VAL A 133 N PHE A 118 SHEET 3 AD 4 TYR A 173 THR A 182 -1 O TYR A 173 N PHE A 139 SHEET 4 AD 4 VAL A 159 TRP A 163 -1 O LEU A 160 N THR A 178 SHEET 1 AE 4 GLU A 154 ARG A 155 0 SHEET 2 AE 4 ASN A 145 ILE A 150 -1 O TRP A 148 N ARG A 155 SHEET 3 AE 4 SER A 191 THR A 197 -1 O THR A 193 N LYS A 149 SHEET 4 AE 4 ILE A 205 ASN A 210 -1 O ILE A 205 N ALA A 196 SHEET 1 BA 4 GLN B 3 GLN B 6 0 SHEET 2 BA 4 SER B 17 SER B 25 -1 O LYS B 23 N GLN B 5 SHEET 3 BA 4 THR B 77 SER B 82A-1 O ALA B 78 N CYS B 22 SHEET 4 BA 4 ALA B 67 ASP B 72 -1 O THR B 68 N GLN B 81 SHEET 1 BB 6 GLU B 10 VAL B 12 0 SHEET 2 BB 6 THR B 107 VAL B 111 1 O LEU B 108 N GLU B 10 SHEET 3 BB 6 ALA B 88 ASP B 96 -1 O ALA B 88 N VAL B 109 SHEET 4 BB 6 MET B 34 GLN B 39 -1 O ASN B 35 N ALA B 93 SHEET 5 BB 6 ASP B 46 ILE B 51 -1 O ASP B 46 N ARG B 38 SHEET 6 BB 6 THR B 57 LEU B 59 -1 O ARG B 58 N MET B 50 SHEET 1 BC 4 GLU B 10 VAL B 12 0 SHEET 2 BC 4 THR B 107 VAL B 111 1 O LEU B 108 N GLU B 10 SHEET 3 BC 4 ALA B 88 ASP B 96 -1 O ALA B 88 N VAL B 109 SHEET 4 BC 4 GLY B 99 TRP B 103 -1 O GLY B 99 N ASP B 96 SHEET 1 BD 4 SER B 120 LEU B 124 0 SHEET 2 BD 4 MET B 135 TYR B 145 -1 O GLY B 139 N LEU B 124 SHEET 3 BD 4 LEU B 174 PRO B 184 -1 O TYR B 175 N TYR B 145 SHEET 4 BD 4 VAL B 163 THR B 165 -1 O HIS B 164 N SER B 180 SHEET 1 BE 4 SER B 120 LEU B 124 0 SHEET 2 BE 4 MET B 135 TYR B 145 -1 O GLY B 139 N LEU B 124 SHEET 3 BE 4 LEU B 174 PRO B 184 -1 O TYR B 175 N TYR B 145 SHEET 4 BE 4 VAL B 169 GLN B 171 -1 O VAL B 169 N THR B 176 SHEET 1 BF 3 THR B 151 TRP B 154 0 SHEET 2 BF 3 THR B 194 HIS B 199 -1 O ASN B 196 N THR B 153 SHEET 3 BF 3 THR B 204 LYS B 209 -1 O THR B 204 N HIS B 199 SHEET 1 HA 4 GLN H 3 GLN H 6 0 SHEET 2 HA 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 HA 4 THR H 77 LEU H 82 -1 O ALA H 78 N CYS H 22 SHEET 4 HA 4 LEU H 69 ASP H 72 -1 O THR H 70 N TYR H 79 SHEET 1 HB 9 GLU H 10 VAL H 12 0 SHEET 2 HB 9 THR H 107 VAL H 111 1 O LEU H 108 N GLU H 10 SHEET 3 HB 9 ALA H 88 ASP H 96 -1 O ALA H 88 N VAL H 109 SHEET 4 HB 9 THR H 57 LEU H 59 0 SHEET 5 HB 9 ASP H 46 ILE H 51 -1 O MET H 50 N ARG H 58 SHEET 6 HB 9 MET H 34 GLN H 39 -1 O MET H 34 N ILE H 51 SHEET 7 HB 9 ALA H 88 ASP H 96 -1 O VAL H 89 N GLN H 39 SHEET 8 HB 9 GLY H 99 PHE H 102 -1 O GLY H 99 N ASP H 96 SHEET 9 HB 9 ALA H 88 ASP H 96 -1 O ARG H 94 N PHE H 102 SHEET 1 HC 7 SER H 120 LEU H 124 0 SHEET 2 HC 7 MET H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 HC 7 LEU H 174 PRO H 184 -1 O TYR H 175 N TYR H 145 SHEET 4 HC 7 VAL H 163 THR H 165 -1 O HIS H 164 N SER H 180 SHEET 5 HC 7 LEU H 174 PRO H 184 -1 O SER H 180 N HIS H 164 SHEET 6 HC 7 VAL H 169 GLN H 171 -1 O VAL H 169 N THR H 176 SHEET 7 HC 7 LEU H 174 PRO H 184 -1 O LEU H 174 N GLN H 171 SHEET 1 HD 3 THR H 151 TRP H 154 0 SHEET 2 HD 3 THR H 194 HIS H 199 -1 O ASN H 196 N THR H 153 SHEET 3 HD 3 THR H 204 LYS H 209 -1 O THR H 204 N HIS H 199 SHEET 1 LA 4 MET L 4 SER L 7 0 SHEET 2 LA 4 ALA L 19 SER L 25 -1 O SER L 22 N SER L 7 SHEET 3 LA 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 LA 4 PHE L 62 SER L 67 -1 O THR L 63 N LYS L 74 SHEET 1 LB 9 THR L 10 LEU L 11 0 SHEET 2 LB 9 THR L 102 LEU L 104 1 O LYS L 103 N LEU L 11 SHEET 3 LB 9 GLY L 84 GLN L 90 -1 O GLY L 84 N LEU L 104 SHEET 4 LB 9 LYS L 53 LEU L 54 0 SHEET 5 LB 9 LYS L 45 TYR L 49 -1 O TYR L 49 N LYS L 53 SHEET 6 LB 9 LEU L 33 GLN L 38 -1 O TRP L 35 N LEU L 47 SHEET 7 LB 9 GLY L 84 GLN L 90 -1 O ILE L 85 N GLN L 38 SHEET 8 LB 9 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 9 LB 9 GLY L 84 GLN L 90 -1 O GLN L 90 N THR L 97 SHEET 1 LC 4 THR L 114 PHE L 118 0 SHEET 2 LC 4 GLY L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 LC 4 TYR L 173 THR L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 LC 4 VAL L 159 TRP L 163 -1 O LEU L 160 N THR L 178 SHEET 1 LD 3 ASN L 145 ILE L 150 0 SHEET 2 LD 3 SER L 191 THR L 197 -1 O THR L 193 N LYS L 149 SHEET 3 LD 3 ILE L 205 ASN L 210 -1 O ILE L 205 N ALA L 196 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.02 SSBOND 2 CYS A 134 CYS A 194 1555 1555 2.03 SSBOND 3 CYS B 22 CYS B 92 1555 1555 2.03 SSBOND 4 CYS B 140 CYS B 195 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 6 CYS H 140 CYS H 195 1555 1555 2.04 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.02 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.03 CISPEP 1 SER A 7 PRO A 8 0 -0.13 CISPEP 2 PHE A 94 PRO A 95 0 -0.26 CISPEP 3 TYR A 140 PRO A 141 0 0.22 CISPEP 4 PHE B 146 PRO B 147 0 0.12 CISPEP 5 ALA B 148 PRO B 149 0 0.01 CISPEP 6 TRP B 188 PRO B 189 0 -0.02 CISPEP 7 PHE H 146 PRO H 147 0 -0.32 CISPEP 8 ALA H 148 PRO H 149 0 0.22 CISPEP 9 TRP H 188 PRO H 189 0 -0.02 CISPEP 10 SER L 7 PRO L 8 0 -0.02 CISPEP 11 PHE L 94 PRO L 95 0 -0.48 CISPEP 12 TYR L 140 PRO L 141 0 -0.09 CRYST1 71.805 88.680 141.441 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013927 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007070 0.00000