HEADER TRANSFERASE 02-OCT-05 2C30 TITLE CRYSTAL STRUCTURE OF THE HUMAN P21-ACTIVATED KINASE 6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 383-681; COMPND 5 SYNONYM: P21-ACTIVATED KINASE 6, PAK-6, PAK-5; COMPND 6 EC: 2.7.1.37; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRIB DOMAIN, ATP-BINDING, TRANSFERASE, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,G.BERRIDGE,J.BRAY,N.BURGESS,S.COLEBROOK,S.DAS, AUTHOR 2 J.ESWARAN,O.GILEADI,E.PAPAGRIGORIOU,P.SAVITSKY,C.SMEE,A.TURNBULL, AUTHOR 3 M.SUNDSTROM,C.ARROWSMITH,J.WEIGELT,A.EDWARDS,F.VON DELFT,S.KNAPP REVDAT 8 23-OCT-24 2C30 1 REMARK REVDAT 7 13-DEC-23 2C30 1 REMARK REVDAT 6 08-MAY-19 2C30 1 REMARK LINK REVDAT 5 24-JAN-18 2C30 1 AUTHOR REVDAT 4 13-JUL-11 2C30 1 VERSN REVDAT 3 24-FEB-09 2C30 1 VERSN REVDAT 2 20-FEB-07 2C30 1 JRNL REVDAT 1 08-FEB-06 2C30 0 JRNL AUTH J.ESWARAN,W.H.LEE,J.E.DEBRECZENI,P.FILIPPAKOPOULOS, JRNL AUTH 2 A.TURNBULL,O.FEDOROV,S.W.DEACON,J.R.PETERSON,S.KNAPP JRNL TITL CRYSTAL STRUCTURES OF THE P21-ACTIVATED KINASES PAK4, PAK5, JRNL TITL 2 AND PAK6 REVEAL CATALYTIC DOMAIN PLASTICITY OF ACTIVE GROUP JRNL TITL 3 II PAKS. JRNL REF STRUCTURE V. 15 201 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17292838 JRNL DOI 10.1016/J.STR.2007.01.001 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 49551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1675 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3264 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 112 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2288 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.48000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.084 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.633 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2384 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3234 ; 1.610 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2 ; 0.046 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 6.096 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;36.029 ;23.810 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 446 ;13.074 ;15.034 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;20.083 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 376 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1750 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1220 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1 ; 0.007 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1670 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2 ; 0.272 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 272 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.131 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1499 ; 1.221 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2382 ; 1.601 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 986 ; 2.531 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 851 ; 3.905 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 385 A 485 REMARK 3 ORIGIN FOR THE GROUP (A): 50.3030 54.0933 -2.3532 REMARK 3 T TENSOR REMARK 3 T11: -0.0628 T22: -0.0232 REMARK 3 T33: -0.0485 T12: -0.0082 REMARK 3 T13: 0.0190 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.6901 L22: 1.0368 REMARK 3 L33: 0.9601 L12: -0.4590 REMARK 3 L13: -0.3176 L23: 0.3400 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.0531 S13: -0.0185 REMARK 3 S21: -0.0556 S22: -0.0032 S23: 0.0643 REMARK 3 S31: -0.0732 S32: -0.0264 S33: -0.0464 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 486 A 674 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3668 55.1569 21.6948 REMARK 3 T TENSOR REMARK 3 T11: -0.0890 T22: -0.0902 REMARK 3 T33: -0.1057 T12: -0.0140 REMARK 3 T13: 0.0087 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.1612 L22: 1.1720 REMARK 3 L33: 0.9937 L12: -0.1002 REMARK 3 L13: -0.2140 L23: 0.1053 REMARK 3 S TENSOR REMARK 3 S11: -0.0092 S12: -0.0766 S13: -0.0506 REMARK 3 S21: 0.0736 S22: 0.0034 S23: -0.0057 REMARK 3 S31: 0.0484 S32: 0.0519 S33: 0.0058 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. UNEXPLAINED SIGMAA DENSITY REMAINS UNMODELLED AFTER REMARK 3 THE LAST MODELLED RESIDUE, AND AROUND SIDECHAIN A615. REMARK 4 REMARK 4 2C30 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1290025851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9764 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI (111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 177870 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 55.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2BVA, 1YHW, 1YHV, 1F3M REMARK 200 REMARK 200 REMARK: ENSEMBLE OF MODELS WAS USED IN PHASER AS SEARCH MODEL. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.60M MGSO4 0.1M MES PH 6.5 SITTING REMARK 280 DROPS, 150NL AND 50NL PROTEIN AND RESERVOIR MIX., PH 6.50, VAPOR REMARK 280 DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.89050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.49950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.33700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.49950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.89050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.33700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 361 REMARK 465 HIS A 362 REMARK 465 HIS A 363 REMARK 465 HIS A 364 REMARK 465 HIS A 365 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 SER A 368 REMARK 465 SER A 369 REMARK 465 GLY A 370 REMARK 465 VAL A 371 REMARK 465 ASP A 372 REMARK 465 LEU A 373 REMARK 465 GLY A 374 REMARK 465 THR A 375 REMARK 465 GLU A 376 REMARK 465 ASN A 377 REMARK 465 LEU A 378 REMARK 465 TYR A 379 REMARK 465 PHE A 380 REMARK 465 GLN A 381 REMARK 465 SER A 382 REMARK 465 GLY A 383 REMARK 465 VAL A 384 REMARK 465 ARG A 675 REMARK 465 LYS A 676 REMARK 465 GLN A 677 REMARK 465 THR A 678 REMARK 465 SER A 679 REMARK 465 THR A 680 REMARK 465 CYS A 681 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 400 CG CD OE1 NE2 REMARK 470 ARG A 457 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 462 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 553 CG CD CE NZ REMARK 470 ASP A 615 CG OD1 OD2 REMARK 470 ARG A 632 CD NE CZ NH1 NH2 REMARK 470 GLU A 645 CD OE1 OE2 REMARK 470 GLU A 665 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 543 O HOH A 2176 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2290 O HOH A 2306 3655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 559 16.13 -142.98 REMARK 500 ALA A 579 -142.86 -136.79 REMARK 500 ASN A 623 50.29 -92.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2217 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH A2218 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A2247 DISTANCE = 6.03 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1675 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1676 DBREF 2C30 A 383 681 UNP Q9NQU5 PAK6_HUMAN 383 681 SEQADV 2C30 MET A 361 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 HIS A 362 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 HIS A 363 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 HIS A 364 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 HIS A 365 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 HIS A 366 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 HIS A 367 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 SER A 368 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 SER A 369 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 GLY A 370 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 VAL A 371 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 ASP A 372 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 LEU A 373 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 GLY A 374 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 THR A 375 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 GLU A 376 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 ASN A 377 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 LEU A 378 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 TYR A 379 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 PHE A 380 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 GLN A 381 UNP Q9NQU5 EXPRESSION TAG SEQADV 2C30 SER A 382 UNP Q9NQU5 EXPRESSION TAG SEQRES 1 A 321 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 321 GLY THR GLU ASN LEU TYR PHE GLN SER GLY VAL VAL THR SEQRES 3 A 321 HIS GLU GLN PHE LYS ALA ALA LEU ARG MET VAL VAL ASP SEQRES 4 A 321 GLN GLY ASP PRO ARG LEU LEU LEU ASP SER TYR VAL LYS SEQRES 5 A 321 ILE GLY GLU GLY SER THR GLY ILE VAL CYS LEU ALA ARG SEQRES 6 A 321 GLU LYS HIS SER GLY ARG GLN VAL ALA VAL LYS MET MET SEQRES 7 A 321 ASP LEU ARG LYS GLN GLN ARG ARG GLU LEU LEU PHE ASN SEQRES 8 A 321 GLU VAL VAL ILE MET ARG ASP TYR GLN HIS PHE ASN VAL SEQRES 9 A 321 VAL GLU MET TYR LYS SER TYR LEU VAL GLY GLU GLU LEU SEQRES 10 A 321 TRP VAL LEU MET GLU PHE LEU GLN GLY GLY ALA LEU THR SEQRES 11 A 321 ASP ILE VAL SER GLN VAL ARG LEU ASN GLU GLU GLN ILE SEQRES 12 A 321 ALA THR VAL CYS GLU ALA VAL LEU GLN ALA LEU ALA TYR SEQRES 13 A 321 LEU HIS ALA GLN GLY VAL ILE HIS ARG ASP ILE LYS SER SEQRES 14 A 321 ASP SER ILE LEU LEU THR LEU ASP GLY ARG VAL LYS LEU SEQRES 15 A 321 SER ASP PHE GLY PHE CYS ALA GLN ILE SER LYS ASP VAL SEQRES 16 A 321 PRO LYS ARG LYS SEP LEU VAL GLY THR PRO TYR TRP MET SEQRES 17 A 321 ALA PRO GLU VAL ILE SER ARG SER LEU TYR ALA THR GLU SEQRES 18 A 321 VAL ASP ILE TRP SER LEU GLY ILE MET VAL ILE GLU MET SEQRES 19 A 321 VAL ASP GLY GLU PRO PRO TYR PHE SER ASP SER PRO VAL SEQRES 20 A 321 GLN ALA MET LYS ARG LEU ARG ASP SER PRO PRO PRO LYS SEQRES 21 A 321 LEU LYS ASN SER HIS LYS VAL SER PRO VAL LEU ARG ASP SEQRES 22 A 321 PHE LEU GLU ARG MET LEU VAL ARG ASP PRO GLN GLU ARG SEQRES 23 A 321 ALA THR ALA GLN GLU LEU LEU ASP HIS PRO PHE LEU LEU SEQRES 24 A 321 GLN THR GLY LEU PRO GLU CYS LEU VAL PRO LEU ILE GLN SEQRES 25 A 321 LEU TYR ARG LYS GLN THR SER THR CYS MODRES 2C30 SEP A 560 SER PHOSPHOSERINE HET SEP A 560 10 HET PO4 A1675 5 HET CL A1676 1 HETNAM SEP PHOSPHOSERINE HETNAM PO4 PHOSPHATE ION HETNAM CL CHLORIDE ION HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 PO4 O4 P 3- FORMUL 3 CL CL 1- FORMUL 4 HOH *350(H2 O) HELIX 1 1 THR A 386 MET A 396 1 11 HELIX 2 2 ASP A 402 LEU A 406 1 5 HELIX 3 3 ARG A 445 ARG A 457 1 13 HELIX 4 4 ALA A 488 SER A 494 1 7 HELIX 5 5 ASN A 499 GLN A 520 1 22 HELIX 6 6 LYS A 528 ASP A 530 5 3 HELIX 7 7 THR A 564 MET A 568 5 5 HELIX 8 8 ALA A 569 SER A 574 1 6 HELIX 9 9 THR A 580 GLY A 597 1 18 HELIX 10 10 SER A 605 SER A 616 1 12 HELIX 11 11 ASN A 623 VAL A 627 5 5 HELIX 12 12 SER A 628 LEU A 639 1 12 HELIX 13 13 THR A 648 ASP A 654 1 7 HELIX 14 14 HIS A 655 THR A 661 5 7 HELIX 15 15 LEU A 663 CYS A 666 5 4 HELIX 16 16 LEU A 667 TYR A 674 1 8 SHEET 1 AA 5 LEU A 407 GLY A 416 0 SHEET 2 AA 5 GLY A 419 GLU A 426 -1 O GLY A 419 N GLY A 416 SHEET 3 AA 5 GLN A 432 ASP A 439 -1 O VAL A 433 N ALA A 424 SHEET 4 AA 5 GLU A 476 MET A 481 -1 O LEU A 477 N MET A 438 SHEET 5 AA 5 MET A 467 VAL A 473 -1 N TYR A 468 O LEU A 480 SHEET 1 AB 2 VAL A 522 ILE A 523 0 SHEET 2 AB 2 ALA A 549 GLN A 550 -1 O ALA A 549 N ILE A 523 SHEET 1 AC 2 ILE A 532 LEU A 534 0 SHEET 2 AC 2 VAL A 540 LEU A 542 -1 O LYS A 541 N LEU A 533 LINK C LYS A 559 N SEP A 560 1555 1555 1.34 LINK C SEP A 560 N LEU A 561 1555 1555 1.35 SITE 1 AC1 5 GLN A 444 ARG A 445 ARG A 446 HOH A2349 SITE 2 AC1 5 HOH A2350 SITE 1 AC2 3 GLN A 485 THR A 535 LEU A 536 CRYST1 59.781 66.674 96.999 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016728 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014998 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010309 0.00000