data_2C6B # _entry.id 2C6B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2C6B PDBE EBI-26298 WWPDB D_1290026298 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1RV1 unspecified 'CRYSTAL STRUCTURE OF HUMAN MDM2 WITH AN IMIDAZOLINEINHIBITOR' PDB 1T4E unspecified 'STRUCTURE OF HUMAN MDM2 IN COMPLEX WITH A BENZODIAZEPINEINHIBITOR' PDB 1T4F unspecified 'STRUCTURE OF HUMAN MDM2 IN COMPLEX WITH AN OPTIMIZED P53PEPTIDE' PDB 1YCR unspecified 'MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF P53' PDB 1Z1M unspecified 'NMR STRUCTURE OF UNLIGANDED MDM2' PDB 2C6A unspecified 'SOLUTION STRUCTURE OF THE C4 ZINC-FINGER DOMAIN OF HDM2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2C6B _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-11-08 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yu, G.W.' 1 'Allen, M.D.' 2 'Andreeva, A.' 3 'Fersht, A.R.' 4 'Bycroft, M.' 5 # _citation.id primary _citation.title 'Solution Structure of the C4 Zinc Finger Domain of Hdm2.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 15 _citation.page_first 384 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16385008 _citation.pdbx_database_id_DOI 10.1110/PS.051927306 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yu, G.W.' 1 primary 'Allen, M.D.' 2 primary 'Andreeva, A.' 3 primary 'Fersht, A.R.' 4 primary 'Bycroft, M.' 5 # _cell.entry_id 2C6B _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C6B _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UBIQUITIN-PROTEIN LIGASE E3 MDM2' 5417.995 1 6.3.2.- ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HUMAN MDM2, P53-BINDING PROTEIN MDM2, ONCOPROTEIN MDM2, DOUBLE MINUTE 2 PROTEIN, HDM2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKG _entity_poly.pdbx_seq_one_letter_code_can SFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PHE n 1 3 GLU n 1 4 GLU n 1 5 ASP n 1 6 PRO n 1 7 GLU n 1 8 ILE n 1 9 SER n 1 10 LEU n 1 11 ALA n 1 12 ASP n 1 13 TYR n 1 14 TRP n 1 15 LYS n 1 16 CYS n 1 17 THR n 1 18 SER n 1 19 CYS n 1 20 ASN n 1 21 GLU n 1 22 MET n 1 23 ASN n 1 24 PRO n 1 25 PRO n 1 26 LEU n 1 27 PRO n 1 28 SER n 1 29 HIS n 1 30 CYS n 1 31 ASN n 1 32 ARG n 1 33 CYS n 1 34 TRP n 1 35 ALA n 1 36 LEU n 1 37 ARG n 1 38 GLU n 1 39 ASN n 1 40 TRP n 1 41 LEU n 1 42 PRO n 1 43 GLU n 1 44 ASP n 1 45 LYS n 1 46 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant C41 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'MODIFIED PRSETA' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MDM2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q00987 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2C6B _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 46 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q00987 _struct_ref_seq.db_align_beg 290 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 335 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 290 _struct_ref_seq.pdbx_auth_seq_align_end 335 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293.0 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '90% WATER/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DMX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 2C6B _pdbx_nmr_refine.method ? _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2C6B _pdbx_nmr_details.text NONE # _pdbx_nmr_ensemble.entry_id 2C6B _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'NO VIOLATIONS > 0.25A' # _pdbx_nmr_representative.entry_id 2C6B _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CNS ? 'BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE,SIMONSON,WARREN' 1 'structure solution' ANSIG ? ? 2 'structure solution' AZARA ? ? 3 'structure solution' CNS ? ? 4 # _exptl.entry_id 2C6B _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2C6B _struct.title 'Solution structure of the C4 zinc-finger domain of HDM2' _struct.pdbx_descriptor 'UBIQUITIN-PROTEIN LIGASE E3 MDM2 (E.C.6.3.2.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2C6B _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;ZINC FINGER, HUMAN MDM2, LIGASE, PHOSPHORYLATION, ALTERNATIVE SPLICING, METAL-BINDING, NUCLEAR PROTEIN, PROTO- ONCOGENE, UBL CONJUGATION PATHWAY, ZINC ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 16 SG ? ? A ZN 336 A CYS 305 1_555 ? ? ? ? ? ? ? 2.347 ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 33 SG ? ? A ZN 336 A CYS 322 1_555 ? ? ? ? ? ? ? 2.348 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 19 SG ? ? A ZN 336 A CYS 308 1_555 ? ? ? ? ? ? ? 2.291 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 30 SG ? ? A ZN 336 A CYS 319 1_555 ? ? ? ? ? ? ? 2.294 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 1 0.07 2 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 2 0.12 3 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 3 0.13 4 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 4 0.03 5 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 5 -0.03 6 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 6 -0.06 7 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 7 0.10 8 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 8 0.15 9 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 9 0.23 10 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 10 0.08 11 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 11 0.14 12 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 12 0.07 13 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 13 0.16 14 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 14 0.01 15 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 15 0.08 16 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 16 -0.07 17 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 17 -0.12 18 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 18 0.08 19 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 19 0.15 20 LEU 26 A . ? LEU 315 A PRO 27 A ? PRO 316 A 20 0.05 # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TRP A 14 ? LYS A 15 ? TRP A 303 LYS A 304 AA 2 MET A 22 ? ASN A 23 ? MET A 311 ASN A 312 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TRP _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 14 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TRP _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 303 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ASN _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 23 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ASN _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 312 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 336' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 16 ? CYS A 305 . ? 1_555 ? 2 AC1 4 CYS A 19 ? CYS A 308 . ? 1_555 ? 3 AC1 4 CYS A 30 ? CYS A 319 . ? 1_555 ? 4 AC1 4 CYS A 33 ? CYS A 322 . ? 1_555 ? # _database_PDB_matrix.entry_id 2C6B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2C6B _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 290 290 SER SER A . n A 1 2 PHE 2 291 291 PHE PHE A . n A 1 3 GLU 3 292 292 GLU GLU A . n A 1 4 GLU 4 293 293 GLU GLU A . n A 1 5 ASP 5 294 294 ASP ASP A . n A 1 6 PRO 6 295 295 PRO PRO A . n A 1 7 GLU 7 296 296 GLU GLU A . n A 1 8 ILE 8 297 297 ILE ILE A . n A 1 9 SER 9 298 298 SER SER A . n A 1 10 LEU 10 299 299 LEU LEU A . n A 1 11 ALA 11 300 300 ALA ALA A . n A 1 12 ASP 12 301 301 ASP ASP A . n A 1 13 TYR 13 302 302 TYR TYR A . n A 1 14 TRP 14 303 303 TRP TRP A . n A 1 15 LYS 15 304 304 LYS LYS A . n A 1 16 CYS 16 305 305 CYS CYS A . n A 1 17 THR 17 306 306 THR THR A . n A 1 18 SER 18 307 307 SER SER A . n A 1 19 CYS 19 308 308 CYS CYS A . n A 1 20 ASN 20 309 309 ASN ASN A . n A 1 21 GLU 21 310 310 GLU GLU A . n A 1 22 MET 22 311 311 MET MET A . n A 1 23 ASN 23 312 312 ASN ASN A . n A 1 24 PRO 24 313 313 PRO PRO A . n A 1 25 PRO 25 314 314 PRO PRO A . n A 1 26 LEU 26 315 315 LEU LEU A . n A 1 27 PRO 27 316 316 PRO PRO A . n A 1 28 SER 28 317 317 SER SER A . n A 1 29 HIS 29 318 318 HIS HIS A . n A 1 30 CYS 30 319 319 CYS CYS A . n A 1 31 ASN 31 320 320 ASN ASN A . n A 1 32 ARG 32 321 321 ARG ARG A . n A 1 33 CYS 33 322 322 CYS CYS A . n A 1 34 TRP 34 323 323 TRP TRP A . n A 1 35 ALA 35 324 324 ALA ALA A . n A 1 36 LEU 36 325 325 LEU LEU A . n A 1 37 ARG 37 326 326 ARG ARG A . n A 1 38 GLU 38 327 327 GLU GLU A . n A 1 39 ASN 39 328 328 ASN ASN A . n A 1 40 TRP 40 329 329 TRP TRP A . n A 1 41 LEU 41 330 330 LEU LEU A . n A 1 42 PRO 42 331 331 PRO PRO A . n A 1 43 GLU 43 332 332 GLU GLU A . n A 1 44 ASP 44 333 333 ASP ASP A . n A 1 45 LYS 45 334 334 LYS LYS A . n A 1 46 GLY 46 335 335 GLY GLY A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 336 _pdbx_nonpoly_scheme.auth_seq_num 336 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 16 ? A CYS 305 ? 1_555 ZN ? B ZN . ? A ZN 336 ? 1_555 SG ? A CYS 33 ? A CYS 322 ? 1_555 98.3 ? 2 SG ? A CYS 16 ? A CYS 305 ? 1_555 ZN ? B ZN . ? A ZN 336 ? 1_555 SG ? A CYS 19 ? A CYS 308 ? 1_555 106.8 ? 3 SG ? A CYS 33 ? A CYS 322 ? 1_555 ZN ? B ZN . ? A ZN 336 ? 1_555 SG ? A CYS 19 ? A CYS 308 ? 1_555 118.0 ? 4 SG ? A CYS 16 ? A CYS 305 ? 1_555 ZN ? B ZN . ? A ZN 336 ? 1_555 SG ? A CYS 30 ? A CYS 319 ? 1_555 116.7 ? 5 SG ? A CYS 33 ? A CYS 322 ? 1_555 ZN ? B ZN . ? A ZN 336 ? 1_555 SG ? A CYS 30 ? A CYS 319 ? 1_555 116.8 ? 6 SG ? A CYS 19 ? A CYS 308 ? 1_555 ZN ? B ZN . ? A ZN 336 ? 1_555 SG ? A CYS 30 ? A CYS 319 ? 1_555 100.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-04 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Source and taxonomy' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category entity_src_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 2 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 3 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 4 4 'Structure model' '_entity_src_gen.pdbx_host_org_variant' # _pdbx_entry_details.entry_id 2C6B _pdbx_entry_details.compound_details ;UBIQUITIN-PROTEIN LIGASE E3 MDM2 FUNCTIONS BY INHIBITING P53- AND P73-MEDIATED CELL CYCLE ARREST AND APOPTOSIS BY BINDING ITS TRANSCRIPTIONAL ACTIVATION DOMAIN. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 293 ? ? 58.75 103.91 2 1 GLU A 296 ? ? -61.72 -72.16 3 1 TYR A 302 ? ? -50.92 174.05 4 1 ASN A 309 ? ? 62.67 63.99 5 1 SER A 317 ? ? -81.50 48.99 6 1 ARG A 321 ? ? -98.28 -66.47 7 1 TRP A 323 ? ? 67.00 70.09 8 1 ARG A 326 ? ? -56.78 173.33 9 2 PHE A 291 ? ? -104.02 -78.54 10 2 GLU A 293 ? ? -157.38 77.38 11 2 ASN A 309 ? ? 60.62 62.28 12 2 SER A 317 ? ? -91.11 45.19 13 2 ARG A 321 ? ? -88.12 -78.55 14 2 TRP A 323 ? ? 62.22 62.47 15 2 LEU A 325 ? ? 63.79 140.11 16 2 TRP A 329 ? ? -139.97 -93.79 17 2 ASP A 333 ? ? -115.81 62.08 18 3 GLU A 296 ? ? 60.68 -82.45 19 3 SER A 317 ? ? -90.30 48.47 20 3 ARG A 321 ? ? -99.01 -62.40 21 3 TRP A 323 ? ? 61.67 61.19 22 3 LEU A 325 ? ? 63.65 137.89 23 3 TRP A 329 ? ? -145.69 -46.42 24 4 GLU A 293 ? ? -59.26 -169.87 25 4 ASP A 294 ? ? -174.41 -54.03 26 4 ILE A 297 ? ? 60.25 154.31 27 4 SER A 317 ? ? -93.54 38.75 28 4 LEU A 325 ? ? 66.39 144.90 29 5 ASP A 294 ? ? -142.23 57.57 30 5 ILE A 297 ? ? 61.55 152.06 31 5 TYR A 302 ? ? -49.84 160.98 32 5 SER A 317 ? ? -86.31 49.43 33 5 ARG A 321 ? ? -93.81 -64.57 34 5 LEU A 325 ? ? 67.44 139.94 35 5 PRO A 331 ? ? -55.41 -176.92 36 5 ASP A 333 ? ? -59.18 91.93 37 5 LYS A 334 ? ? -147.88 36.04 38 6 GLU A 292 ? ? 58.37 169.95 39 6 ILE A 297 ? ? 60.37 153.84 40 6 SER A 317 ? ? -80.65 46.77 41 6 TRP A 323 ? ? 74.48 64.85 42 6 ARG A 326 ? ? -46.58 168.76 43 7 ILE A 297 ? ? 60.85 152.96 44 7 TYR A 302 ? ? -48.47 168.51 45 7 SER A 317 ? ? -80.38 48.76 46 7 ARG A 321 ? ? -92.15 -74.21 47 7 TRP A 323 ? ? 66.99 73.51 48 8 GLU A 292 ? ? -97.11 42.13 49 8 ILE A 297 ? ? 60.70 152.76 50 8 TYR A 302 ? ? -51.69 171.04 51 8 ASN A 309 ? ? 61.07 63.67 52 8 ARG A 321 ? ? -83.57 -79.09 53 8 TRP A 323 ? ? 74.19 72.80 54 9 GLU A 296 ? ? -157.31 32.19 55 9 ASN A 309 ? ? 62.82 63.79 56 9 SER A 317 ? ? -87.99 48.54 57 9 ARG A 321 ? ? -99.79 -66.64 58 9 TRP A 323 ? ? 67.06 69.56 59 9 ASP A 333 ? ? -69.38 -176.60 60 10 PHE A 291 ? ? -172.62 -62.52 61 10 GLU A 296 ? ? 59.93 78.57 62 10 TYR A 302 ? ? -51.42 170.81 63 10 ASN A 309 ? ? 62.84 64.64 64 10 SER A 317 ? ? -92.24 37.63 65 10 ARG A 321 ? ? -99.24 -70.36 66 10 TRP A 323 ? ? 65.96 74.93 67 10 TRP A 329 ? ? -144.05 -44.77 68 11 GLU A 293 ? ? -60.72 -178.32 69 11 GLU A 296 ? ? -59.37 99.32 70 11 ASN A 309 ? ? 66.85 63.83 71 11 SER A 317 ? ? -91.52 36.46 72 11 ARG A 321 ? ? -99.59 -63.11 73 11 TRP A 323 ? ? 64.82 74.88 74 11 LEU A 330 ? ? -57.92 109.88 75 12 GLU A 293 ? ? -60.89 -177.60 76 12 GLU A 296 ? ? -51.86 93.67 77 12 ASN A 309 ? ? 63.29 62.90 78 12 ARG A 321 ? ? -99.35 -67.21 79 12 TRP A 323 ? ? 66.72 72.68 80 12 TRP A 329 ? ? -58.86 -161.53 81 12 GLU A 332 ? ? -59.40 107.78 82 12 ASP A 333 ? ? -172.74 128.53 83 13 GLU A 296 ? ? 60.19 174.13 84 13 TYR A 302 ? ? -55.85 177.49 85 13 ASN A 309 ? ? 64.05 62.94 86 13 SER A 317 ? ? -89.77 44.97 87 13 ARG A 321 ? ? -95.91 -63.11 88 13 TRP A 323 ? ? 63.01 72.52 89 13 LYS A 334 ? ? 60.78 110.88 90 14 GLU A 292 ? ? -168.69 89.07 91 14 ASP A 294 ? ? 60.69 79.11 92 14 GLU A 296 ? ? -58.19 -78.17 93 14 SER A 317 ? ? -82.58 49.59 94 14 ARG A 321 ? ? -85.97 -75.33 95 14 LEU A 325 ? ? 68.90 132.25 96 14 TRP A 329 ? ? -140.19 -49.80 97 14 PRO A 331 ? ? -85.37 42.43 98 14 ASP A 333 ? ? 60.29 101.97 99 15 GLU A 296 ? ? -53.54 -175.47 100 15 ILE A 297 ? ? -47.98 157.52 101 15 SER A 298 ? ? -52.27 173.14 102 15 TYR A 302 ? ? -55.90 170.30 103 15 SER A 307 ? ? -122.12 -55.91 104 15 SER A 317 ? ? -93.45 39.87 105 15 ARG A 321 ? ? -85.49 -79.39 106 15 TRP A 323 ? ? 73.50 67.93 107 16 GLU A 293 ? ? 59.61 108.95 108 16 ILE A 297 ? ? 60.70 153.39 109 16 TYR A 302 ? ? -51.93 171.07 110 16 SER A 317 ? ? -84.34 38.06 111 16 ARG A 321 ? ? -98.63 -64.70 112 16 TRP A 323 ? ? 35.96 33.57 113 16 LEU A 325 ? ? -43.77 151.32 114 16 PRO A 331 ? ? -50.93 93.13 115 16 GLU A 332 ? ? -66.50 -174.49 116 16 ASP A 333 ? ? -149.44 -78.38 117 16 LYS A 334 ? ? 60.01 173.93 118 17 PHE A 291 ? ? -114.52 72.27 119 17 ASP A 294 ? ? -179.86 -52.82 120 17 SER A 298 ? ? -55.07 -177.62 121 17 TYR A 302 ? ? -53.51 171.99 122 17 ASN A 309 ? ? 62.52 65.72 123 17 SER A 317 ? ? -82.23 41.29 124 17 ARG A 321 ? ? -97.43 -62.98 125 17 TRP A 323 ? ? 70.03 74.59 126 17 TRP A 329 ? ? -155.41 -51.71 127 17 ASP A 333 ? ? -65.24 90.08 128 18 GLU A 293 ? ? -60.45 94.41 129 18 ILE A 297 ? ? 60.28 154.15 130 18 ASN A 309 ? ? 61.22 60.55 131 18 SER A 317 ? ? -89.08 49.33 132 18 ARG A 321 ? ? -97.67 -61.95 133 18 TRP A 323 ? ? 62.94 62.50 134 18 LEU A 325 ? ? 65.90 137.26 135 19 ASP A 294 ? ? 179.95 -55.23 136 19 GLU A 296 ? ? -63.14 81.80 137 19 TYR A 302 ? ? -52.85 170.55 138 19 ASN A 309 ? ? 68.13 62.57 139 19 SER A 317 ? ? -90.75 46.49 140 19 ARG A 321 ? ? -97.48 -68.20 141 19 TRP A 323 ? ? 69.87 75.51 142 19 ARG A 326 ? ? -54.93 177.68 143 19 ASP A 333 ? ? -117.28 -78.21 144 20 GLU A 296 ? ? -146.54 -74.31 145 20 SER A 317 ? ? -91.94 39.13 146 20 ARG A 321 ? ? -93.90 -69.52 147 20 TRP A 323 ? ? 70.53 75.45 148 20 TRP A 329 ? ? -154.41 -51.86 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #