HEADER HYDROLASE 21-NOV-05 2C7B TITLE THE CRYSTAL STRUCTURE OF ESTE1, A NEW THERMOPHILIC AND THERMOSTABLE TITLE 2 CARBOXYLESTERASE CLONED FROM A METAGENOMIC LIBRARY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYLESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ALPHA-BETA HYDROLASE FOLD, RESIDUES 1-311; COMPND 5 SYNONYM: ESTE1; COMPND 6 EC: 3.1.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED ARCHAEON; SOURCE 3 ORGANISM_TAXID: 115547; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 8 OTHER_DETAILS: METAGENOMES FROM THERMAL ENVIRONMENTAL SAMPLES KEYWDS CARBOXYESTERASE, THERMOPHILIC ENZYME, HYDROLASE, HSL, ALPHA/BETA KEYWDS 2 HYDROLASE FOLD EXPDTA X-RAY DIFFRACTION AUTHOR J.-S.BYUN,J.-K.RHEE,D.-U.KIM,J.-W.OH,H.-S.CHO REVDAT 3 20-NOV-24 2C7B 1 LINK REVDAT 2 24-FEB-09 2C7B 1 VERSN REVDAT 1 01-DEC-05 2C7B 0 JRNL AUTH J.-S.BYUN,J.-K.RHEE,N.D.KIM,J.YOON,D.-U.KIM,E.KOH,J.-W.OH, JRNL AUTH 2 H.-S.CHO JRNL TITL CRYSTAL STRUCTURE OF HYPERTHERMOPHILIC ESTERASE ESTE1 AND JRNL TITL 2 THE RELATIONSHIP BETWEEN ITS DIMERIZATION AND JRNL TITL 3 THERMOSTABILITY PROPERTIES. JRNL REF BMC STRUCT.BIOL. V. 7 47 2007 JRNL REFN ESSN 1472-6807 JRNL PMID 17625021 JRNL DOI 10.1186/1472-6807-7-47 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 76.1 REMARK 3 NUMBER OF REFLECTIONS : 54674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2721 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4469 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.77700 REMARK 3 B22 (A**2) : -2.77700 REMARK 3 B33 (A**2) : 5.55400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 40.38 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2C7B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1290026498. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 6B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER AXS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29848 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH6.5, 0.2M AMMONIUM REMARK 280 SULFATE, 35%(W/V) PEG 3350, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 117.11500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.85500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.85500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.55750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.85500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.85500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 175.67250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.85500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.85500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.55750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.85500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.85500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 175.67250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 117.11500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 234.23000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 LEU A 3 REMARK 465 ASP A 4 REMARK 465 PRO A 5 REMARK 465 GLN A 6 REMARK 465 ILE A 7 REMARK 465 LYS A 8 REMARK 465 PRO A 9 REMARK 465 ILE A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 ARG A 13 REMARK 465 ILE A 14 REMARK 465 ARG A 15 REMARK 465 ALA A 16 REMARK 465 MSE B 1 REMARK 465 PRO B 2 REMARK 465 LEU B 3 REMARK 465 ASP B 4 REMARK 465 PRO B 5 REMARK 465 GLN B 6 REMARK 465 ILE B 7 REMARK 465 LYS B 8 REMARK 465 PRO B 9 REMARK 465 ILE B 10 REMARK 465 LEU B 11 REMARK 465 GLU B 12 REMARK 465 ARG B 13 REMARK 465 ILE B 14 REMARK 465 ARG B 15 REMARK 465 ALA B 16 REMARK 465 LEU B 17 REMARK 465 SER B 18 REMARK 465 ILE B 19 REMARK 465 ALA B 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 311 CA C O CB OG REMARK 470 SER B 311 CA C O CB OG REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 209 CG CD REMARK 480 ARG A 221 CD NE CZ NH1 NH2 REMARK 480 GLU A 223 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 216 O HOH A 2062 1.33 REMARK 500 CG GLN B 29 NE2 GLN B 33 1.59 REMARK 500 C PHE A 120 CD PRO A 121 1.64 REMARK 500 O THR B 203 N THR B 204 1.74 REMARK 500 O PHE A 120 CD PRO A 121 1.78 REMARK 500 ND1 HIS A 52 O HOH A 2018 2.11 REMARK 500 OE2 GLU B 43 OH TYR B 287 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N ASP B 139 NH2 ARG B 221 6455 1.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B 98 C LEU B 99 N -0.223 REMARK 500 LEU B 114 C ALA B 115 N 0.229 REMARK 500 PHE B 120 C PRO B 121 N 0.138 REMARK 500 THR B 203 C THR B 204 N -0.273 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 121 C - N - CA ANGL. DEV. = 58.0 DEGREES REMARK 500 PRO A 121 C - N - CD ANGL. DEV. = -59.5 DEGREES REMARK 500 PRO A 222 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 VAL B 41 CB - CA - C ANGL. DEV. = -11.6 DEGREES REMARK 500 VAL B 41 N - CA - C ANGL. DEV. = -19.8 DEGREES REMARK 500 ALA B 46 C - N - CA ANGL. DEV. = 17.9 DEGREES REMARK 500 ALA B 46 CA - C - N ANGL. DEV. = 16.9 DEGREES REMARK 500 ALA B 46 O - C - N ANGL. DEV. = -15.1 DEGREES REMARK 500 HIS B 94 O - C - N ANGL. DEV. = 9.9 DEGREES REMARK 500 ILE B 95 O - C - N ANGL. DEV. = -10.1 DEGREES REMARK 500 ALA B 115 C - N - CA ANGL. DEV. = -18.5 DEGREES REMARK 500 PRO B 116 CA - N - CD ANGL. DEV. = -47.4 DEGREES REMARK 500 PRO B 116 N - CA - CB ANGL. DEV. = 9.7 DEGREES REMARK 500 PRO B 116 CB - CG - CD ANGL. DEV. = -16.9 DEGREES REMARK 500 PRO B 121 C - N - CD ANGL. DEV. = -20.0 DEGREES REMARK 500 PRO B 121 CA - N - CD ANGL. DEV. = -45.6 DEGREES REMARK 500 PRO B 121 CA - CB - CG ANGL. DEV. = -13.9 DEGREES REMARK 500 PRO B 145 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 THR B 203 CA - C - N ANGL. DEV. = 18.6 DEGREES REMARK 500 THR B 203 O - C - N ANGL. DEV. = -23.1 DEGREES REMARK 500 THR B 204 CA - C - N ANGL. DEV. = -18.3 DEGREES REMARK 500 THR B 204 O - C - N ANGL. DEV. = 16.7 DEGREES REMARK 500 SER B 205 C - N - CA ANGL. DEV. = 18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 18 98.85 97.61 REMARK 500 PHE A 84 -1.92 75.45 REMARK 500 PRO A 121 -7.07 100.83 REMARK 500 SER A 154 -120.95 59.54 REMARK 500 TYR A 182 55.12 32.37 REMARK 500 VAL A 190 95.91 -69.39 REMARK 500 THR A 203 47.23 -92.27 REMARK 500 PRO A 222 -18.81 -20.18 REMARK 500 ALA B 39 45.89 -91.50 REMARK 500 ALA B 40 117.28 157.87 REMARK 500 VAL B 41 140.31 162.94 REMARK 500 ALA B 46 -83.96 -30.93 REMARK 500 PHE B 120 146.30 -36.05 REMARK 500 PRO B 121 -64.40 97.59 REMARK 500 THR B 122 -71.74 -42.63 REMARK 500 SER B 154 -124.00 45.40 REMARK 500 TYR B 182 60.68 33.44 REMARK 500 THR B 188 -159.95 -69.17 REMARK 500 THR B 203 19.47 -146.62 REMARK 500 LEU B 206 63.90 -150.59 REMARK 500 LYS B 220 -77.85 -65.36 REMARK 500 TYR B 250 42.54 -109.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR B 203 18.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BZQ RELATED DB: PDB REMARK 900 ANALYSIS OF THE THERMOSTABILITY DETERMINANTS OF HYPERTHERMOPHILIC REMARK 900 ESTERASE, ESTE1, BASED ON THE PREDICTED THREE-DIMENSIONAL STRUCTURE DBREF 2C7B A 1 311 UNP Q5G935 Q5G935_9ARCH 1 311 DBREF 2C7B B 1 311 UNP Q5G935 Q5G935_9ARCH 1 311 SEQRES 1 A 311 MSE PRO LEU ASP PRO GLN ILE LYS PRO ILE LEU GLU ARG SEQRES 2 A 311 ILE ARG ALA LEU SER ILE ALA ALA SER PRO GLN GLU LEU SEQRES 3 A 311 ARG ARG GLN VAL GLU GLU GLN SER ARG LEU LEU THR ALA SEQRES 4 A 311 ALA VAL GLN GLU PRO ILE ALA GLU THR ARG ASP VAL HIS SEQRES 5 A 311 ILE PRO VAL SER GLY GLY SER ILE ARG ALA ARG VAL TYR SEQRES 6 A 311 PHE PRO LYS LYS ALA ALA GLY LEU PRO ALA VAL LEU TYR SEQRES 7 A 311 TYR HIS GLY GLY GLY PHE VAL PHE GLY SER ILE GLU THR SEQRES 8 A 311 HIS ASP HIS ILE CYS ARG ARG LEU SER ARG LEU SER ASP SEQRES 9 A 311 SER VAL VAL VAL SER VAL ASP TYR ARG LEU ALA PRO GLU SEQRES 10 A 311 TYR LYS PHE PRO THR ALA VAL GLU ASP ALA TYR ALA ALA SEQRES 11 A 311 LEU LYS TRP VAL ALA ASP ARG ALA ASP GLU LEU GLY VAL SEQRES 12 A 311 ASP PRO ASP ARG ILE ALA VAL ALA GLY ASP SER ALA GLY SEQRES 13 A 311 GLY ASN LEU ALA ALA VAL VAL SER ILE LEU ASP ARG ASN SEQRES 14 A 311 SER GLY GLU LYS LEU VAL LYS LYS GLN VAL LEU ILE TYR SEQRES 15 A 311 PRO VAL VAL ASN MSE THR GLY VAL PRO THR ALA SER LEU SEQRES 16 A 311 VAL GLU PHE GLY VAL ALA GLU THR THR SER LEU PRO ILE SEQRES 17 A 311 GLU LEU MSE VAL TRP PHE GLY ARG GLN TYR LEU LYS ARG SEQRES 18 A 311 PRO GLU GLU ALA TYR ASP PHE LYS ALA SER PRO LEU LEU SEQRES 19 A 311 ALA ASP LEU GLY GLY LEU PRO PRO ALA LEU VAL VAL THR SEQRES 20 A 311 ALA GLU TYR ASP PRO LEU ARG ASP GLU GLY GLU LEU TYR SEQRES 21 A 311 ALA TYR LYS MSE LYS ALA SER GLY SER ARG ALA VAL ALA SEQRES 22 A 311 VAL ARG PHE ALA GLY MSE VAL HIS GLY PHE VAL SER PHE SEQRES 23 A 311 TYR PRO PHE VAL ASP ALA GLY ARG GLU ALA LEU ASP LEU SEQRES 24 A 311 ALA ALA ALA SER ILE ARG SER GLY LEU GLN PRO SER SEQRES 1 B 311 MSE PRO LEU ASP PRO GLN ILE LYS PRO ILE LEU GLU ARG SEQRES 2 B 311 ILE ARG ALA LEU SER ILE ALA ALA SER PRO GLN GLU LEU SEQRES 3 B 311 ARG ARG GLN VAL GLU GLU GLN SER ARG LEU LEU THR ALA SEQRES 4 B 311 ALA VAL GLN GLU PRO ILE ALA GLU THR ARG ASP VAL HIS SEQRES 5 B 311 ILE PRO VAL SER GLY GLY SER ILE ARG ALA ARG VAL TYR SEQRES 6 B 311 PHE PRO LYS LYS ALA ALA GLY LEU PRO ALA VAL LEU TYR SEQRES 7 B 311 TYR HIS GLY GLY GLY PHE VAL PHE GLY SER ILE GLU THR SEQRES 8 B 311 HIS ASP HIS ILE CYS ARG ARG LEU SER ARG LEU SER ASP SEQRES 9 B 311 SER VAL VAL VAL SER VAL ASP TYR ARG LEU ALA PRO GLU SEQRES 10 B 311 TYR LYS PHE PRO THR ALA VAL GLU ASP ALA TYR ALA ALA SEQRES 11 B 311 LEU LYS TRP VAL ALA ASP ARG ALA ASP GLU LEU GLY VAL SEQRES 12 B 311 ASP PRO ASP ARG ILE ALA VAL ALA GLY ASP SER ALA GLY SEQRES 13 B 311 GLY ASN LEU ALA ALA VAL VAL SER ILE LEU ASP ARG ASN SEQRES 14 B 311 SER GLY GLU LYS LEU VAL LYS LYS GLN VAL LEU ILE TYR SEQRES 15 B 311 PRO VAL VAL ASN MSE THR GLY VAL PRO THR ALA SER LEU SEQRES 16 B 311 VAL GLU PHE GLY VAL ALA GLU THR THR SER LEU PRO ILE SEQRES 17 B 311 GLU LEU MSE VAL TRP PHE GLY ARG GLN TYR LEU LYS ARG SEQRES 18 B 311 PRO GLU GLU ALA TYR ASP PHE LYS ALA SER PRO LEU LEU SEQRES 19 B 311 ALA ASP LEU GLY GLY LEU PRO PRO ALA LEU VAL VAL THR SEQRES 20 B 311 ALA GLU TYR ASP PRO LEU ARG ASP GLU GLY GLU LEU TYR SEQRES 21 B 311 ALA TYR LYS MSE LYS ALA SER GLY SER ARG ALA VAL ALA SEQRES 22 B 311 VAL ARG PHE ALA GLY MSE VAL HIS GLY PHE VAL SER PHE SEQRES 23 B 311 TYR PRO PHE VAL ASP ALA GLY ARG GLU ALA LEU ASP LEU SEQRES 24 B 311 ALA ALA ALA SER ILE ARG SER GLY LEU GLN PRO SER MODRES 2C7B MSE A 187 MET SELENOMETHIONINE MODRES 2C7B MSE A 211 MET SELENOMETHIONINE MODRES 2C7B MSE A 264 MET SELENOMETHIONINE MODRES 2C7B MSE A 279 MET SELENOMETHIONINE MODRES 2C7B MSE B 187 MET SELENOMETHIONINE MODRES 2C7B MSE B 211 MET SELENOMETHIONINE MODRES 2C7B MSE B 264 MET SELENOMETHIONINE MODRES 2C7B MSE B 279 MET SELENOMETHIONINE HET MSE A 187 8 HET MSE A 211 8 HET MSE A 264 8 HET MSE A 279 8 HET MSE B 187 8 HET MSE B 211 8 HET MSE B 264 8 HET MSE B 279 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *138(H2 O) HELIX 1 1 SER A 22 ALA A 40 1 19 HELIX 2 2 ILE A 89 THR A 91 5 3 HELIX 3 3 HIS A 92 ASP A 104 1 13 HELIX 4 4 PRO A 121 ARG A 137 1 17 HELIX 5 5 ARG A 137 GLY A 142 1 6 HELIX 6 6 SER A 154 SER A 170 1 17 HELIX 7 7 THR A 192 ALA A 201 1 10 HELIX 8 8 PRO A 207 LEU A 219 1 13 HELIX 9 9 GLU A 223 ASP A 227 5 5 HELIX 10 10 SER A 231 ALA A 235 5 5 HELIX 11 11 LEU A 253 SER A 267 1 15 HELIX 12 12 GLY A 282 TYR A 287 5 6 HELIX 13 13 VAL A 290 LEU A 308 1 19 HELIX 14 14 SER B 22 THR B 38 1 17 HELIX 15 15 ILE B 89 THR B 91 5 3 HELIX 16 16 HIS B 92 ASP B 104 1 13 HELIX 17 17 PRO B 121 ARG B 137 1 17 HELIX 18 18 ARG B 137 GLY B 142 1 6 HELIX 19 19 SER B 154 GLY B 171 1 18 HELIX 20 20 THR B 192 ALA B 201 1 10 HELIX 21 21 PRO B 207 LEU B 219 1 13 HELIX 22 22 PRO B 222 ASP B 227 5 6 HELIX 23 23 SER B 231 ALA B 235 5 5 HELIX 24 24 LEU B 253 SER B 267 1 15 HELIX 25 25 GLY B 282 PHE B 289 5 8 HELIX 26 26 VAL B 290 LEU B 308 1 19 SHEET 1 AA 8 GLU A 47 VAL A 55 0 SHEET 2 AA 8 GLY A 58 PHE A 66 -1 O GLY A 58 N VAL A 55 SHEET 3 AA 8 VAL A 106 VAL A 110 -1 O VAL A 107 N TYR A 65 SHEET 4 AA 8 LEU A 73 TYR A 79 1 O PRO A 74 N VAL A 106 SHEET 5 AA 8 VAL A 143 ASP A 153 1 N ASP A 144 O LEU A 73 SHEET 6 AA 8 LYS A 177 ILE A 181 1 O LYS A 177 N VAL A 150 SHEET 7 AA 8 ALA A 243 ALA A 248 1 O LEU A 244 N LEU A 180 SHEET 8 AA 8 ALA A 271 PHE A 276 1 O VAL A 272 N VAL A 245 SHEET 1 BA 8 GLU B 47 VAL B 55 0 SHEET 2 BA 8 GLY B 58 PHE B 66 -1 O GLY B 58 N VAL B 55 SHEET 3 BA 8 VAL B 106 ASP B 111 -1 O VAL B 107 N TYR B 65 SHEET 4 BA 8 LEU B 73 TYR B 79 1 O PRO B 74 N VAL B 106 SHEET 5 BA 8 VAL B 143 ASP B 153 1 N ASP B 144 O LEU B 73 SHEET 6 BA 8 LYS B 177 ILE B 181 1 O LYS B 177 N VAL B 150 SHEET 7 BA 8 ALA B 243 TYR B 250 1 O LEU B 244 N LEU B 180 SHEET 8 BA 8 ALA B 271 VAL B 280 1 O VAL B 272 N VAL B 245 LINK C ASN A 186 N MSE A 187 1555 1555 1.32 LINK C MSE A 187 N THR A 188 1555 1555 1.33 LINK C LEU A 210 N MSE A 211 1555 1555 1.33 LINK C MSE A 211 N VAL A 212 1555 1555 1.33 LINK C LYS A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N LYS A 265 1555 1555 1.34 LINK C GLY A 278 N MSE A 279 1555 1555 1.34 LINK C MSE A 279 N VAL A 280 1555 1555 1.33 LINK C ASN B 186 N MSE B 187 1555 1555 1.33 LINK C MSE B 187 N THR B 188 1555 1555 1.36 LINK C LEU B 210 N MSE B 211 1555 1555 1.33 LINK C MSE B 211 N VAL B 212 1555 1555 1.32 LINK C LYS B 263 N MSE B 264 1555 1555 1.33 LINK C MSE B 264 N LYS B 265 1555 1555 1.33 LINK C GLY B 278 N MSE B 279 1555 1555 1.33 LINK C MSE B 279 N VAL B 280 1555 1555 1.33 CISPEP 1 ALA A 115 PRO A 116 0 -0.30 CRYST1 73.710 73.710 234.230 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013567 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013567 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004269 0.00000 CONECT 1297 1303 CONECT 1303 1297 1304 CONECT 1304 1303 1305 1307 CONECT 1305 1304 1306 1311 CONECT 1306 1305 CONECT 1307 1304 1308 CONECT 1308 1307 1309 CONECT 1309 1308 1310 CONECT 1310 1309 CONECT 1311 1305 CONECT 1468 1474 CONECT 1474 1468 1475 CONECT 1475 1474 1476 1478 CONECT 1476 1475 1477 1482 CONECT 1477 1476 CONECT 1478 1475 1479 CONECT 1479 1478 1480 CONECT 1480 1479 1481 CONECT 1481 1480 CONECT 1482 1476 CONECT 1896 1903 CONECT 1903 1896 1904 CONECT 1904 1903 1905 1907 CONECT 1905 1904 1906 1911 CONECT 1906 1905 CONECT 1907 1904 1908 CONECT 1908 1907 1909 CONECT 1909 1908 1910 CONECT 1910 1909 CONECT 1911 1905 CONECT 2005 2007 CONECT 2007 2005 2008 CONECT 2008 2007 2009 2011 CONECT 2009 2008 2010 2015 CONECT 2010 2009 CONECT 2011 2008 2012 CONECT 2012 2011 2013 CONECT 2013 2012 2014 CONECT 2014 2013 CONECT 2015 2009 CONECT 3519 3525 CONECT 3525 3519 3526 CONECT 3526 3525 3527 3529 CONECT 3527 3526 3528 3533 CONECT 3528 3527 CONECT 3529 3526 3530 CONECT 3530 3529 3531 CONECT 3531 3530 3532 CONECT 3532 3531 CONECT 3533 3527 CONECT 3690 3696 CONECT 3696 3690 3697 CONECT 3697 3696 3698 3700 CONECT 3698 3697 3699 3704 CONECT 3699 3698 CONECT 3700 3697 3701 CONECT 3701 3700 3702 CONECT 3702 3701 3703 CONECT 3703 3702 CONECT 3704 3698 CONECT 4118 4125 CONECT 4125 4118 4126 CONECT 4126 4125 4127 4129 CONECT 4127 4126 4128 4133 CONECT 4128 4127 CONECT 4129 4126 4130 CONECT 4130 4129 4131 CONECT 4131 4130 4132 CONECT 4132 4131 CONECT 4133 4127 CONECT 4227 4229 CONECT 4229 4227 4230 CONECT 4230 4229 4231 4233 CONECT 4231 4230 4232 4237 CONECT 4232 4231 CONECT 4233 4230 4234 CONECT 4234 4233 4235 CONECT 4235 4234 4236 CONECT 4236 4235 CONECT 4237 4231 MASTER 450 0 8 26 16 0 0 6 4607 2 80 48 END