data_2C7W # _entry.id 2C7W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2C7W pdb_00002c7w 10.2210/pdb2c7w/pdb PDBE EBI-26588 ? ? WWPDB D_1290026588 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2C7W _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-11-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Iyer, S.' 1 'Scotney, P.D.' 2 'Nash, A.D.' 3 'Acharya, K.R.' 4 # _citation.id primary _citation.title 'Crystal Structure of Human Vascular Endothelial Growth Factor-B: Identification of Amino Acids Important for Receptor Binding' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 359 _citation.page_first 76 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16616187 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2006.03.002 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Iyer, S.' 1 ? primary 'Scotney, P.D.' 2 ? primary 'Nash, A.D.' 3 ? primary 'Acharya, K.R.' 4 ? # _cell.entry_id 2C7W _cell.length_a 120.806 _cell.length_b 120.806 _cell.length_c 39.826 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C7W _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'VASCULAR ENDOTHELIAL GROWTH FACTOR B PRECURSOR' 11157.050 2 ? ? ? ? 2 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 3 water nat water 18.015 74 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'VASCULAR ENDOTHELIAL GROWTH FACTOR-B, VEGF-B, VEGF RELATED FACTOR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRYPSSQ LGEMSLEEHSQCECRPKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRYPSSQ LGEMSLEEHSQCECRPKKK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 GLN n 1 3 ARG n 1 4 LYS n 1 5 VAL n 1 6 VAL n 1 7 SER n 1 8 TRP n 1 9 ILE n 1 10 ASP n 1 11 VAL n 1 12 TYR n 1 13 THR n 1 14 ARG n 1 15 ALA n 1 16 THR n 1 17 CYS n 1 18 GLN n 1 19 PRO n 1 20 ARG n 1 21 GLU n 1 22 VAL n 1 23 VAL n 1 24 VAL n 1 25 PRO n 1 26 LEU n 1 27 THR n 1 28 VAL n 1 29 GLU n 1 30 LEU n 1 31 MET n 1 32 GLY n 1 33 THR n 1 34 VAL n 1 35 ALA n 1 36 LYS n 1 37 GLN n 1 38 LEU n 1 39 VAL n 1 40 PRO n 1 41 SER n 1 42 CYS n 1 43 VAL n 1 44 THR n 1 45 VAL n 1 46 GLN n 1 47 ARG n 1 48 CYS n 1 49 GLY n 1 50 GLY n 1 51 CYS n 1 52 CYS n 1 53 PRO n 1 54 ASP n 1 55 ASP n 1 56 GLY n 1 57 LEU n 1 58 GLU n 1 59 CYS n 1 60 VAL n 1 61 PRO n 1 62 THR n 1 63 GLY n 1 64 GLN n 1 65 HIS n 1 66 GLN n 1 67 VAL n 1 68 ARG n 1 69 MET n 1 70 GLN n 1 71 ILE n 1 72 LEU n 1 73 MET n 1 74 ILE n 1 75 ARG n 1 76 TYR n 1 77 PRO n 1 78 SER n 1 79 SER n 1 80 GLN n 1 81 LEU n 1 82 GLY n 1 83 GLU n 1 84 MET n 1 85 SER n 1 86 LEU n 1 87 GLU n 1 88 GLU n 1 89 HIS n 1 90 SER n 1 91 GLN n 1 92 CYS n 1 93 GLU n 1 94 CYS n 1 95 ARG n 1 96 PRO n 1 97 LYS n 1 98 LYS n 1 99 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET15B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VEGFB_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P49765 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2C7W A 1 ? 99 ? P49765 31 ? 129 ? 10 108 2 1 2C7W B 1 ? 99 ? P49765 31 ? 129 ? 10 108 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2C7W _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.4 _exptl_crystal.density_percent_sol 63.1 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.80 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M HEPES (PH 6.8), 0.5M AMMONIUM SULPHATE 50%, MPD' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2003-09-18 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.2 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2C7W _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 2.480 _reflns.number_obs 12054 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.09600 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.9000 _reflns.B_iso_Wilson_estimate 43.1 _reflns.pdbx_redundancy 9.100 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.48 _reflns_shell.d_res_low 2.57 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs 0.63000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.400 _reflns_shell.pdbx_redundancy 10.10 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2C7W _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10937 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 441769.31 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 2.48 _refine.ls_percent_reflns_obs 90.7 _refine.ls_R_factor_obs 0.286 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.286 _refine.ls_R_factor_R_free 0.310 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.9 _refine.ls_number_reflns_R_free 712 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 40.2 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.379841 _refine.solvent_model_param_bsol 72.1563 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2VPF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2C7W _refine_analyze.Luzzati_coordinate_error_obs 0.41 _refine_analyze.Luzzati_sigma_a_obs 0.44 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.43 _refine_analyze.Luzzati_sigma_a_free 0.56 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1392 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 1474 _refine_hist.d_res_high 2.48 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.11 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.48 _refine_ls_shell.d_res_low 2.57 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.312 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 MPD.PARAM MPD.TOP # _struct.entry_id 2C7W _struct.title 'Crystal Structure of human vascular endothelial growth factor-B: Identification of amino acids important for angiogeninc activity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2C7W _struct_keywords.pdbx_keywords 'GROWTH FACTOR' _struct_keywords.text ;VASCULAR ENDOTHELIAL GROWTH FACTOR-B, ANGIOGENESIS, CYSTEINE-KNOT MOTIF, TYROSINE KINASE, ISCHEMIA, MITOGEN, GLYCOPROTEIN, GROWTH FACTOR, HEPARIN-BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? THR A 16 ? SER A 16 THR A 25 1 ? 10 HELX_P HELX_P2 1 LEU A 26 ? VAL A 39 ? LEU A 35 VAL A 48 1 ? 14 HELX_P HELX_P3 2 SER B 7 ? THR B 16 ? SER B 16 THR B 25 1 ? 10 HELX_P HELX_P4 2 LEU B 26 ? VAL B 39 ? LEU B 35 VAL B 48 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 59 SG ? ? A CYS 26 A CYS 68 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? A CYS 42 SG ? ? ? 1_555 B CYS 51 SG ? ? A CYS 51 B CYS 60 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf3 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 92 SG ? ? A CYS 57 A CYS 101 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf4 disulf ? ? A CYS 51 SG ? ? ? 1_555 B CYS 42 SG ? ? A CYS 60 B CYS 51 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf5 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 61 A CYS 103 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf6 disulf ? ? B CYS 17 SG ? ? ? 1_555 B CYS 59 SG ? ? B CYS 26 B CYS 68 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf7 disulf ? ? B CYS 48 SG ? ? ? 1_555 B CYS 92 SG ? ? B CYS 57 B CYS 101 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf8 disulf ? ? B CYS 52 SG ? ? ? 1_555 B CYS 94 SG ? ? B CYS 61 B CYS 103 1_555 ? ? ? ? ? ? ? 2.032 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 39 A . ? VAL 48 A PRO 40 A ? PRO 49 A 1 -0.06 2 VAL 39 B . ? VAL 48 B PRO 40 B ? PRO 49 B 1 -0.09 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 3 ? AD ? 2 ? AE ? 2 ? BA ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLN A 18 ? PRO A 25 ? GLN A 27 PRO A 34 AA 2 CYS A 42 ? GLY A 49 ? CYS A 51 GLY A 58 AB 1 LEU A 57 ? VAL A 60 ? LEU A 66 VAL A 69 AB 2 GLU A 93 ? PRO A 96 ? GLU A 102 PRO A 105 AC 1 GLN A 37 ? VAL A 39 ? GLN A 46 VAL A 48 AC 2 GLN A 64 ? ARG A 75 ? GLN A 73 ARG A 84 AC 3 GLN A 80 ? SER A 90 ? GLN A 89 SER A 99 AD 1 GLN B 18 ? PRO B 25 ? GLN B 27 PRO B 34 AD 2 CYS B 42 ? GLY B 49 ? CYS B 51 GLY B 58 AE 1 LEU B 57 ? VAL B 60 ? LEU B 66 VAL B 69 AE 2 GLU B 93 ? PRO B 96 ? GLU B 102 PRO B 105 BA 1 GLN B 37 ? VAL B 39 ? GLN B 46 VAL B 48 BA 2 GLN B 64 ? ARG B 75 ? GLN B 73 ARG B 84 BA 3 GLN B 80 ? SER B 90 ? GLN B 89 SER B 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 24 ? N VAL A 33 O VAL A 43 ? O VAL A 52 AC 1 2 N VAL A 39 ? N VAL A 48 O LEU A 72 ? O LEU A 81 AD 1 2 N VAL B 24 ? N VAL B 33 O VAL B 43 ? O VAL B 52 BA 1 2 N VAL B 39 ? N VAL B 48 O LEU B 72 ? O LEU B 81 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE MPD B1108' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLN A 70 ? GLN A 79 . ? 1_555 ? 2 AC1 7 LEU A 81 ? LEU A 90 . ? 1_555 ? 3 AC1 7 GLY A 82 ? GLY A 91 . ? 1_555 ? 4 AC1 7 GLU A 83 ? GLU A 92 . ? 1_555 ? 5 AC1 7 GLN B 70 ? GLN B 79 . ? 1_555 ? 6 AC1 7 LEU B 81 ? LEU B 90 . ? 1_555 ? 7 AC1 7 GLU B 83 ? GLU B 92 . ? 1_555 ? # _database_PDB_matrix.entry_id 2C7W _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2C7W _atom_sites.fract_transf_matrix[1][1] 0.008278 _atom_sites.fract_transf_matrix[1][2] 0.004779 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009558 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025109 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 10 ? ? ? A . n A 1 2 GLN 2 11 ? ? ? A . n A 1 3 ARG 3 12 ? ? ? A . n A 1 4 LYS 4 13 13 LYS LYS A . n A 1 5 VAL 5 14 14 VAL VAL A . n A 1 6 VAL 6 15 15 VAL VAL A . n A 1 7 SER 7 16 16 SER SER A . n A 1 8 TRP 8 17 17 TRP TRP A . n A 1 9 ILE 9 18 18 ILE ILE A . n A 1 10 ASP 10 19 19 ASP ASP A . n A 1 11 VAL 11 20 20 VAL VAL A . n A 1 12 TYR 12 21 21 TYR TYR A . n A 1 13 THR 13 22 22 THR THR A . n A 1 14 ARG 14 23 23 ARG ARG A . n A 1 15 ALA 15 24 24 ALA ALA A . n A 1 16 THR 16 25 25 THR THR A . n A 1 17 CYS 17 26 26 CYS CYS A . n A 1 18 GLN 18 27 27 GLN GLN A . n A 1 19 PRO 19 28 28 PRO PRO A . n A 1 20 ARG 20 29 29 ARG ARG A . n A 1 21 GLU 21 30 30 GLU GLU A . n A 1 22 VAL 22 31 31 VAL VAL A . n A 1 23 VAL 23 32 32 VAL VAL A . n A 1 24 VAL 24 33 33 VAL VAL A . n A 1 25 PRO 25 34 34 PRO PRO A . n A 1 26 LEU 26 35 35 LEU LEU A . n A 1 27 THR 27 36 36 THR THR A . n A 1 28 VAL 28 37 37 VAL VAL A . n A 1 29 GLU 29 38 38 GLU GLU A . n A 1 30 LEU 30 39 39 LEU LEU A . n A 1 31 MET 31 40 40 MET MET A . n A 1 32 GLY 32 41 41 GLY GLY A . n A 1 33 THR 33 42 42 THR THR A . n A 1 34 VAL 34 43 43 VAL VAL A . n A 1 35 ALA 35 44 44 ALA ALA A . n A 1 36 LYS 36 45 45 LYS LYS A . n A 1 37 GLN 37 46 46 GLN GLN A . n A 1 38 LEU 38 47 47 LEU LEU A . n A 1 39 VAL 39 48 48 VAL VAL A . n A 1 40 PRO 40 49 49 PRO PRO A . n A 1 41 SER 41 50 50 SER SER A . n A 1 42 CYS 42 51 51 CYS CYS A . n A 1 43 VAL 43 52 52 VAL VAL A . n A 1 44 THR 44 53 53 THR THR A . n A 1 45 VAL 45 54 54 VAL VAL A . n A 1 46 GLN 46 55 55 GLN GLN A . n A 1 47 ARG 47 56 56 ARG ARG A . n A 1 48 CYS 48 57 57 CYS CYS A . n A 1 49 GLY 49 58 58 GLY GLY A . n A 1 50 GLY 50 59 59 GLY GLY A . n A 1 51 CYS 51 60 60 CYS CYS A . n A 1 52 CYS 52 61 61 CYS CYS A . n A 1 53 PRO 53 62 62 PRO PRO A . n A 1 54 ASP 54 63 63 ASP ASP A . n A 1 55 ASP 55 64 64 ASP ASP A . n A 1 56 GLY 56 65 65 GLY GLY A . n A 1 57 LEU 57 66 66 LEU LEU A . n A 1 58 GLU 58 67 67 GLU GLU A . n A 1 59 CYS 59 68 68 CYS CYS A . n A 1 60 VAL 60 69 69 VAL VAL A . n A 1 61 PRO 61 70 70 PRO PRO A . n A 1 62 THR 62 71 71 THR THR A . n A 1 63 GLY 63 72 72 GLY GLY A . n A 1 64 GLN 64 73 73 GLN GLN A . n A 1 65 HIS 65 74 74 HIS HIS A . n A 1 66 GLN 66 75 75 GLN GLN A . n A 1 67 VAL 67 76 76 VAL VAL A . n A 1 68 ARG 68 77 77 ARG ARG A . n A 1 69 MET 69 78 78 MET MET A . n A 1 70 GLN 70 79 79 GLN GLN A . n A 1 71 ILE 71 80 80 ILE ILE A . n A 1 72 LEU 72 81 81 LEU LEU A . n A 1 73 MET 73 82 82 MET MET A . n A 1 74 ILE 74 83 83 ILE ILE A . n A 1 75 ARG 75 84 84 ARG ARG A . n A 1 76 TYR 76 85 85 TYR TYR A . n A 1 77 PRO 77 86 86 PRO PRO A . n A 1 78 SER 78 87 87 SER SER A . n A 1 79 SER 79 88 88 SER SER A . n A 1 80 GLN 80 89 89 GLN GLN A . n A 1 81 LEU 81 90 90 LEU LEU A . n A 1 82 GLY 82 91 91 GLY GLY A . n A 1 83 GLU 83 92 92 GLU GLU A . n A 1 84 MET 84 93 93 MET MET A . n A 1 85 SER 85 94 94 SER SER A . n A 1 86 LEU 86 95 95 LEU LEU A . n A 1 87 GLU 87 96 96 GLU GLU A . n A 1 88 GLU 88 97 97 GLU GLU A . n A 1 89 HIS 89 98 98 HIS HIS A . n A 1 90 SER 90 99 99 SER SER A . n A 1 91 GLN 91 100 100 GLN GLN A . n A 1 92 CYS 92 101 101 CYS CYS A . n A 1 93 GLU 93 102 102 GLU GLU A . n A 1 94 CYS 94 103 103 CYS CYS A . n A 1 95 ARG 95 104 104 ARG ARG A . n A 1 96 PRO 96 105 105 PRO PRO A . n A 1 97 LYS 97 106 106 LYS LYS A . n A 1 98 LYS 98 107 107 LYS LYS A . n A 1 99 LYS 99 108 108 LYS LYS A . n B 1 1 HIS 1 10 ? ? ? B . n B 1 2 GLN 2 11 ? ? ? B . n B 1 3 ARG 3 12 ? ? ? B . n B 1 4 LYS 4 13 13 LYS LYS B . n B 1 5 VAL 5 14 14 VAL VAL B . n B 1 6 VAL 6 15 15 VAL VAL B . n B 1 7 SER 7 16 16 SER SER B . n B 1 8 TRP 8 17 17 TRP TRP B . n B 1 9 ILE 9 18 18 ILE ILE B . n B 1 10 ASP 10 19 19 ASP ASP B . n B 1 11 VAL 11 20 20 VAL VAL B . n B 1 12 TYR 12 21 21 TYR TYR B . n B 1 13 THR 13 22 22 THR THR B . n B 1 14 ARG 14 23 23 ARG ARG B . n B 1 15 ALA 15 24 24 ALA ALA B . n B 1 16 THR 16 25 25 THR THR B . n B 1 17 CYS 17 26 26 CYS CYS B . n B 1 18 GLN 18 27 27 GLN GLN B . n B 1 19 PRO 19 28 28 PRO PRO B . n B 1 20 ARG 20 29 29 ARG ARG B . n B 1 21 GLU 21 30 30 GLU GLU B . n B 1 22 VAL 22 31 31 VAL VAL B . n B 1 23 VAL 23 32 32 VAL VAL B . n B 1 24 VAL 24 33 33 VAL VAL B . n B 1 25 PRO 25 34 34 PRO PRO B . n B 1 26 LEU 26 35 35 LEU LEU B . n B 1 27 THR 27 36 36 THR THR B . n B 1 28 VAL 28 37 37 VAL VAL B . n B 1 29 GLU 29 38 38 GLU GLU B . n B 1 30 LEU 30 39 39 LEU LEU B . n B 1 31 MET 31 40 40 MET MET B . n B 1 32 GLY 32 41 41 GLY GLY B . n B 1 33 THR 33 42 42 THR THR B . n B 1 34 VAL 34 43 43 VAL VAL B . n B 1 35 ALA 35 44 44 ALA ALA B . n B 1 36 LYS 36 45 45 LYS LYS B . n B 1 37 GLN 37 46 46 GLN GLN B . n B 1 38 LEU 38 47 47 LEU LEU B . n B 1 39 VAL 39 48 48 VAL VAL B . n B 1 40 PRO 40 49 49 PRO PRO B . n B 1 41 SER 41 50 50 SER SER B . n B 1 42 CYS 42 51 51 CYS CYS B . n B 1 43 VAL 43 52 52 VAL VAL B . n B 1 44 THR 44 53 53 THR THR B . n B 1 45 VAL 45 54 54 VAL VAL B . n B 1 46 GLN 46 55 55 GLN GLN B . n B 1 47 ARG 47 56 56 ARG ARG B . n B 1 48 CYS 48 57 57 CYS CYS B . n B 1 49 GLY 49 58 58 GLY GLY B . n B 1 50 GLY 50 59 59 GLY GLY B . n B 1 51 CYS 51 60 60 CYS CYS B . n B 1 52 CYS 52 61 61 CYS CYS B . n B 1 53 PRO 53 62 62 PRO PRO B . n B 1 54 ASP 54 63 63 ASP ASP B . n B 1 55 ASP 55 64 64 ASP ASP B . n B 1 56 GLY 56 65 65 GLY GLY B . n B 1 57 LEU 57 66 66 LEU LEU B . n B 1 58 GLU 58 67 67 GLU GLU B . n B 1 59 CYS 59 68 68 CYS CYS B . n B 1 60 VAL 60 69 69 VAL VAL B . n B 1 61 PRO 61 70 70 PRO PRO B . n B 1 62 THR 62 71 71 THR THR B . n B 1 63 GLY 63 72 72 GLY GLY B . n B 1 64 GLN 64 73 73 GLN GLN B . n B 1 65 HIS 65 74 74 HIS HIS B . n B 1 66 GLN 66 75 75 GLN GLN B . n B 1 67 VAL 67 76 76 VAL VAL B . n B 1 68 ARG 68 77 77 ARG ARG B . n B 1 69 MET 69 78 78 MET MET B . n B 1 70 GLN 70 79 79 GLN GLN B . n B 1 71 ILE 71 80 80 ILE ILE B . n B 1 72 LEU 72 81 81 LEU LEU B . n B 1 73 MET 73 82 82 MET MET B . n B 1 74 ILE 74 83 83 ILE ILE B . n B 1 75 ARG 75 84 84 ARG ARG B . n B 1 76 TYR 76 85 85 TYR TYR B . n B 1 77 PRO 77 86 86 PRO PRO B . n B 1 78 SER 78 87 87 SER SER B . n B 1 79 SER 79 88 88 SER SER B . n B 1 80 GLN 80 89 89 GLN GLN B . n B 1 81 LEU 81 90 90 LEU LEU B . n B 1 82 GLY 82 91 91 GLY GLY B . n B 1 83 GLU 83 92 92 GLU GLU B . n B 1 84 MET 84 93 93 MET MET B . n B 1 85 SER 85 94 94 SER SER B . n B 1 86 LEU 86 95 95 LEU LEU B . n B 1 87 GLU 87 96 96 GLU GLU B . n B 1 88 GLU 88 97 97 GLU GLU B . n B 1 89 HIS 89 98 98 HIS HIS B . n B 1 90 SER 90 99 99 SER SER B . n B 1 91 GLN 91 100 100 GLN GLN B . n B 1 92 CYS 92 101 101 CYS CYS B . n B 1 93 GLU 93 102 102 GLU GLU B . n B 1 94 CYS 94 103 103 CYS CYS B . n B 1 95 ARG 95 104 104 ARG ARG B . n B 1 96 PRO 96 105 105 PRO PRO B . n B 1 97 LYS 97 106 106 LYS LYS B . n B 1 98 LYS 98 107 107 LYS LYS B . n B 1 99 LYS 99 108 108 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPD 1 1108 1108 MPD MPD B . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 1 2001 2001 HOH HOH B . E 3 HOH 2 2002 2002 HOH HOH B . E 3 HOH 3 2003 2003 HOH HOH B . E 3 HOH 4 2004 2004 HOH HOH B . E 3 HOH 5 2005 2005 HOH HOH B . E 3 HOH 6 2006 2006 HOH HOH B . E 3 HOH 7 2007 2007 HOH HOH B . E 3 HOH 8 2008 2008 HOH HOH B . E 3 HOH 9 2009 2009 HOH HOH B . E 3 HOH 10 2010 2010 HOH HOH B . E 3 HOH 11 2011 2011 HOH HOH B . E 3 HOH 12 2012 2012 HOH HOH B . E 3 HOH 13 2013 2013 HOH HOH B . E 3 HOH 14 2014 2014 HOH HOH B . E 3 HOH 15 2015 2015 HOH HOH B . E 3 HOH 16 2016 2016 HOH HOH B . E 3 HOH 17 2017 2017 HOH HOH B . E 3 HOH 18 2018 2018 HOH HOH B . E 3 HOH 19 2019 2019 HOH HOH B . E 3 HOH 20 2020 2020 HOH HOH B . E 3 HOH 21 2021 2021 HOH HOH B . E 3 HOH 22 2022 2022 HOH HOH B . E 3 HOH 23 2023 2023 HOH HOH B . E 3 HOH 24 2024 2024 HOH HOH B . E 3 HOH 25 2025 2025 HOH HOH B . E 3 HOH 26 2026 2026 HOH HOH B . E 3 HOH 27 2027 2027 HOH HOH B . E 3 HOH 28 2028 2028 HOH HOH B . E 3 HOH 29 2029 2029 HOH HOH B . E 3 HOH 30 2030 2030 HOH HOH B . E 3 HOH 31 2031 2031 HOH HOH B . E 3 HOH 32 2032 2032 HOH HOH B . E 3 HOH 33 2033 2033 HOH HOH B . E 3 HOH 34 2034 2034 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-30 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; 700 ; SHEET DETERMINATION METHOD: AUTHOR PROVIDED. ; # _pdbx_entry_details.entry_id 2C7W _pdbx_entry_details.compound_details 'WORK AS A GROWTH FACTOR FOR ENDOTHELIAL CELLS.' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 18 ? ? -73.26 42.29 2 1 ASP A 19 ? ? -154.12 -50.51 3 1 CYS A 26 ? ? -35.81 127.30 4 1 THR A 36 ? ? -59.81 178.40 5 1 GLU A 38 ? ? -47.14 -19.79 6 1 ALA A 44 ? ? -33.42 99.63 7 1 PRO A 62 ? ? -56.06 24.97 8 1 ASP A 63 ? ? 174.95 148.96 9 1 TYR A 85 ? ? -12.55 -70.87 10 1 PRO A 86 ? ? -18.92 -56.71 11 1 SER A 87 ? ? -172.75 -173.49 12 1 PRO A 105 ? ? -49.26 163.60 13 1 LYS A 107 ? ? -67.32 -165.73 14 1 CYS B 26 ? ? -32.59 121.72 15 1 VAL B 37 ? ? -140.64 -59.67 16 1 GLU B 38 ? ? -54.83 -71.65 17 1 MET B 40 ? ? -35.60 -28.36 18 1 THR B 42 ? ? 44.81 86.11 19 1 GLN B 46 ? ? 119.25 8.90 20 1 PRO B 62 ? ? -48.67 -3.22 21 1 THR B 71 ? ? -140.57 20.54 22 1 HIS B 74 ? ? 175.56 148.52 23 1 TYR B 85 ? ? 20.01 -83.33 24 1 LYS B 106 ? ? -79.83 46.59 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2013 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.97 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 38 ? CB ? A GLU 29 CB 2 1 Y 1 A GLU 38 ? CG ? A GLU 29 CG 3 1 Y 1 A GLU 38 ? CD ? A GLU 29 CD 4 1 Y 1 A GLU 38 ? OE1 ? A GLU 29 OE1 5 1 Y 1 A GLU 38 ? OE2 ? A GLU 29 OE2 6 1 Y 1 A LEU 39 ? CB ? A LEU 30 CB 7 1 Y 1 A LEU 39 ? CG ? A LEU 30 CG 8 1 Y 1 A LEU 39 ? CD1 ? A LEU 30 CD1 9 1 Y 1 A LEU 39 ? CD2 ? A LEU 30 CD2 10 1 Y 1 A THR 42 ? CB ? A THR 33 CB 11 1 Y 1 A THR 42 ? OG1 ? A THR 33 OG1 12 1 Y 1 A THR 42 ? CG2 ? A THR 33 CG2 13 1 Y 1 A LYS 45 ? CG ? A LYS 36 CG 14 1 Y 1 A LYS 45 ? CD ? A LYS 36 CD 15 1 Y 1 A LYS 45 ? CE ? A LYS 36 CE 16 1 Y 1 A LYS 45 ? NZ ? A LYS 36 NZ 17 1 Y 1 A SER 88 ? CB ? A SER 79 CB 18 1 Y 1 A SER 88 ? OG ? A SER 79 OG 19 1 Y 1 A LYS 106 ? CB ? A LYS 97 CB 20 1 Y 1 A LYS 106 ? CG ? A LYS 97 CG 21 1 Y 1 A LYS 106 ? CD ? A LYS 97 CD 22 1 Y 1 A LYS 106 ? CE ? A LYS 97 CE 23 1 Y 1 A LYS 106 ? NZ ? A LYS 97 NZ 24 1 Y 1 A LYS 107 ? CG ? A LYS 98 CG 25 1 Y 1 A LYS 107 ? CD ? A LYS 98 CD 26 1 Y 1 A LYS 107 ? CE ? A LYS 98 CE 27 1 Y 1 A LYS 107 ? NZ ? A LYS 98 NZ 28 1 Y 1 A LYS 108 ? CA ? A LYS 99 CA 29 1 Y 1 A LYS 108 ? C ? A LYS 99 C 30 1 Y 1 A LYS 108 ? O ? A LYS 99 O 31 1 Y 1 A LYS 108 ? CB ? A LYS 99 CB 32 1 Y 1 A LYS 108 ? CG ? A LYS 99 CG 33 1 Y 1 A LYS 108 ? CD ? A LYS 99 CD 34 1 Y 1 A LYS 108 ? CE ? A LYS 99 CE 35 1 Y 1 A LYS 108 ? NZ ? A LYS 99 NZ 36 1 Y 1 B GLU 30 ? CG ? B GLU 21 CG 37 1 Y 1 B GLU 30 ? CD ? B GLU 21 CD 38 1 Y 1 B GLU 30 ? OE1 ? B GLU 21 OE1 39 1 Y 1 B GLU 30 ? OE2 ? B GLU 21 OE2 40 1 Y 1 B VAL 37 ? CB ? B VAL 28 CB 41 1 Y 1 B VAL 37 ? CG1 ? B VAL 28 CG1 42 1 Y 1 B VAL 37 ? CG2 ? B VAL 28 CG2 43 1 Y 1 B GLU 38 ? CB ? B GLU 29 CB 44 1 Y 1 B GLU 38 ? CG ? B GLU 29 CG 45 1 Y 1 B GLU 38 ? CD ? B GLU 29 CD 46 1 Y 1 B GLU 38 ? OE1 ? B GLU 29 OE1 47 1 Y 1 B GLU 38 ? OE2 ? B GLU 29 OE2 48 1 Y 1 B LEU 39 ? CB ? B LEU 30 CB 49 1 Y 1 B LEU 39 ? CG ? B LEU 30 CG 50 1 Y 1 B LEU 39 ? CD1 ? B LEU 30 CD1 51 1 Y 1 B LEU 39 ? CD2 ? B LEU 30 CD2 52 1 Y 1 B MET 40 ? CB ? B MET 31 CB 53 1 Y 1 B MET 40 ? CG ? B MET 31 CG 54 1 Y 1 B MET 40 ? SD ? B MET 31 SD 55 1 Y 1 B MET 40 ? CE ? B MET 31 CE 56 1 Y 1 B LYS 45 ? CB ? B LYS 36 CB 57 1 Y 1 B LYS 45 ? CG ? B LYS 36 CG 58 1 Y 1 B LYS 45 ? CD ? B LYS 36 CD 59 1 Y 1 B LYS 45 ? CE ? B LYS 36 CE 60 1 Y 1 B LYS 45 ? NZ ? B LYS 36 NZ 61 1 Y 1 B GLN 46 ? CB ? B GLN 37 CB 62 1 Y 1 B GLN 46 ? CG ? B GLN 37 CG 63 1 Y 1 B GLN 46 ? CD ? B GLN 37 CD 64 1 Y 1 B GLN 46 ? OE1 ? B GLN 37 OE1 65 1 Y 1 B GLN 46 ? NE2 ? B GLN 37 NE2 66 1 Y 1 B ARG 84 ? CG ? B ARG 75 CG 67 1 Y 1 B ARG 84 ? CD ? B ARG 75 CD 68 1 Y 1 B ARG 84 ? NE ? B ARG 75 NE 69 1 Y 1 B ARG 84 ? CZ ? B ARG 75 CZ 70 1 Y 1 B ARG 84 ? NH1 ? B ARG 75 NH1 71 1 Y 1 B ARG 84 ? NH2 ? B ARG 75 NH2 72 1 Y 1 B LYS 106 ? CB ? B LYS 97 CB 73 1 Y 1 B LYS 106 ? CG ? B LYS 97 CG 74 1 Y 1 B LYS 106 ? CD ? B LYS 97 CD 75 1 Y 1 B LYS 106 ? CE ? B LYS 97 CE 76 1 Y 1 B LYS 106 ? NZ ? B LYS 97 NZ 77 1 Y 1 B LYS 107 ? CG ? B LYS 98 CG 78 1 Y 1 B LYS 107 ? CD ? B LYS 98 CD 79 1 Y 1 B LYS 107 ? CE ? B LYS 98 CE 80 1 Y 1 B LYS 107 ? NZ ? B LYS 98 NZ 81 1 Y 1 B LYS 108 ? CA ? B LYS 99 CA 82 1 Y 1 B LYS 108 ? C ? B LYS 99 C 83 1 Y 1 B LYS 108 ? O ? B LYS 99 O 84 1 Y 1 B LYS 108 ? CB ? B LYS 99 CB 85 1 Y 1 B LYS 108 ? CG ? B LYS 99 CG 86 1 Y 1 B LYS 108 ? CD ? B LYS 99 CD 87 1 Y 1 B LYS 108 ? CE ? B LYS 99 CE 88 1 Y 1 B LYS 108 ? NZ ? B LYS 99 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 10 ? A HIS 1 2 1 Y 1 A GLN 11 ? A GLN 2 3 1 Y 1 A ARG 12 ? A ARG 3 4 1 Y 1 B HIS 10 ? B HIS 1 5 1 Y 1 B GLN 11 ? B GLN 2 6 1 Y 1 B ARG 12 ? B ARG 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 GLN N N N N 71 GLN CA C N S 72 GLN C C N N 73 GLN O O N N 74 GLN CB C N N 75 GLN CG C N N 76 GLN CD C N N 77 GLN OE1 O N N 78 GLN NE2 N N N 79 GLN OXT O N N 80 GLN H H N N 81 GLN H2 H N N 82 GLN HA H N N 83 GLN HB2 H N N 84 GLN HB3 H N N 85 GLN HG2 H N N 86 GLN HG3 H N N 87 GLN HE21 H N N 88 GLN HE22 H N N 89 GLN HXT H N N 90 GLU N N N N 91 GLU CA C N S 92 GLU C C N N 93 GLU O O N N 94 GLU CB C N N 95 GLU CG C N N 96 GLU CD C N N 97 GLU OE1 O N N 98 GLU OE2 O N N 99 GLU OXT O N N 100 GLU H H N N 101 GLU H2 H N N 102 GLU HA H N N 103 GLU HB2 H N N 104 GLU HB3 H N N 105 GLU HG2 H N N 106 GLU HG3 H N N 107 GLU HE2 H N N 108 GLU HXT H N N 109 GLY N N N N 110 GLY CA C N N 111 GLY C C N N 112 GLY O O N N 113 GLY OXT O N N 114 GLY H H N N 115 GLY H2 H N N 116 GLY HA2 H N N 117 GLY HA3 H N N 118 GLY HXT H N N 119 HIS N N N N 120 HIS CA C N S 121 HIS C C N N 122 HIS O O N N 123 HIS CB C N N 124 HIS CG C Y N 125 HIS ND1 N Y N 126 HIS CD2 C Y N 127 HIS CE1 C Y N 128 HIS NE2 N Y N 129 HIS OXT O N N 130 HIS H H N N 131 HIS H2 H N N 132 HIS HA H N N 133 HIS HB2 H N N 134 HIS HB3 H N N 135 HIS HD1 H N N 136 HIS HD2 H N N 137 HIS HE1 H N N 138 HIS HE2 H N N 139 HIS HXT H N N 140 HOH O O N N 141 HOH H1 H N N 142 HOH H2 H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 MPD C1 C N N 233 MPD C2 C N N 234 MPD O2 O N N 235 MPD CM C N N 236 MPD C3 C N N 237 MPD C4 C N S 238 MPD O4 O N N 239 MPD C5 C N N 240 MPD H11 H N N 241 MPD H12 H N N 242 MPD H13 H N N 243 MPD HO2 H N N 244 MPD HM1 H N N 245 MPD HM2 H N N 246 MPD HM3 H N N 247 MPD H31 H N N 248 MPD H32 H N N 249 MPD H4 H N N 250 MPD HO4 H N N 251 MPD H51 H N N 252 MPD H52 H N N 253 MPD H53 H N N 254 PRO N N N N 255 PRO CA C N S 256 PRO C C N N 257 PRO O O N N 258 PRO CB C N N 259 PRO CG C N N 260 PRO CD C N N 261 PRO OXT O N N 262 PRO H H N N 263 PRO HA H N N 264 PRO HB2 H N N 265 PRO HB3 H N N 266 PRO HG2 H N N 267 PRO HG3 H N N 268 PRO HD2 H N N 269 PRO HD3 H N N 270 PRO HXT H N N 271 SER N N N N 272 SER CA C N S 273 SER C C N N 274 SER O O N N 275 SER CB C N N 276 SER OG O N N 277 SER OXT O N N 278 SER H H N N 279 SER H2 H N N 280 SER HA H N N 281 SER HB2 H N N 282 SER HB3 H N N 283 SER HG H N N 284 SER HXT H N N 285 THR N N N N 286 THR CA C N S 287 THR C C N N 288 THR O O N N 289 THR CB C N R 290 THR OG1 O N N 291 THR CG2 C N N 292 THR OXT O N N 293 THR H H N N 294 THR H2 H N N 295 THR HA H N N 296 THR HB H N N 297 THR HG1 H N N 298 THR HG21 H N N 299 THR HG22 H N N 300 THR HG23 H N N 301 THR HXT H N N 302 TRP N N N N 303 TRP CA C N S 304 TRP C C N N 305 TRP O O N N 306 TRP CB C N N 307 TRP CG C Y N 308 TRP CD1 C Y N 309 TRP CD2 C Y N 310 TRP NE1 N Y N 311 TRP CE2 C Y N 312 TRP CE3 C Y N 313 TRP CZ2 C Y N 314 TRP CZ3 C Y N 315 TRP CH2 C Y N 316 TRP OXT O N N 317 TRP H H N N 318 TRP H2 H N N 319 TRP HA H N N 320 TRP HB2 H N N 321 TRP HB3 H N N 322 TRP HD1 H N N 323 TRP HE1 H N N 324 TRP HE3 H N N 325 TRP HZ2 H N N 326 TRP HZ3 H N N 327 TRP HH2 H N N 328 TRP HXT H N N 329 TYR N N N N 330 TYR CA C N S 331 TYR C C N N 332 TYR O O N N 333 TYR CB C N N 334 TYR CG C Y N 335 TYR CD1 C Y N 336 TYR CD2 C Y N 337 TYR CE1 C Y N 338 TYR CE2 C Y N 339 TYR CZ C Y N 340 TYR OH O N N 341 TYR OXT O N N 342 TYR H H N N 343 TYR H2 H N N 344 TYR HA H N N 345 TYR HB2 H N N 346 TYR HB3 H N N 347 TYR HD1 H N N 348 TYR HD2 H N N 349 TYR HE1 H N N 350 TYR HE2 H N N 351 TYR HH H N N 352 TYR HXT H N N 353 VAL N N N N 354 VAL CA C N S 355 VAL C C N N 356 VAL O O N N 357 VAL CB C N N 358 VAL CG1 C N N 359 VAL CG2 C N N 360 VAL OXT O N N 361 VAL H H N N 362 VAL H2 H N N 363 VAL HA H N N 364 VAL HB H N N 365 VAL HG11 H N N 366 VAL HG12 H N N 367 VAL HG13 H N N 368 VAL HG21 H N N 369 VAL HG22 H N N 370 VAL HG23 H N N 371 VAL HXT H N N 372 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 GLN N CA sing N N 67 GLN N H sing N N 68 GLN N H2 sing N N 69 GLN CA C sing N N 70 GLN CA CB sing N N 71 GLN CA HA sing N N 72 GLN C O doub N N 73 GLN C OXT sing N N 74 GLN CB CG sing N N 75 GLN CB HB2 sing N N 76 GLN CB HB3 sing N N 77 GLN CG CD sing N N 78 GLN CG HG2 sing N N 79 GLN CG HG3 sing N N 80 GLN CD OE1 doub N N 81 GLN CD NE2 sing N N 82 GLN NE2 HE21 sing N N 83 GLN NE2 HE22 sing N N 84 GLN OXT HXT sing N N 85 GLU N CA sing N N 86 GLU N H sing N N 87 GLU N H2 sing N N 88 GLU CA C sing N N 89 GLU CA CB sing N N 90 GLU CA HA sing N N 91 GLU C O doub N N 92 GLU C OXT sing N N 93 GLU CB CG sing N N 94 GLU CB HB2 sing N N 95 GLU CB HB3 sing N N 96 GLU CG CD sing N N 97 GLU CG HG2 sing N N 98 GLU CG HG3 sing N N 99 GLU CD OE1 doub N N 100 GLU CD OE2 sing N N 101 GLU OE2 HE2 sing N N 102 GLU OXT HXT sing N N 103 GLY N CA sing N N 104 GLY N H sing N N 105 GLY N H2 sing N N 106 GLY CA C sing N N 107 GLY CA HA2 sing N N 108 GLY CA HA3 sing N N 109 GLY C O doub N N 110 GLY C OXT sing N N 111 GLY OXT HXT sing N N 112 HIS N CA sing N N 113 HIS N H sing N N 114 HIS N H2 sing N N 115 HIS CA C sing N N 116 HIS CA CB sing N N 117 HIS CA HA sing N N 118 HIS C O doub N N 119 HIS C OXT sing N N 120 HIS CB CG sing N N 121 HIS CB HB2 sing N N 122 HIS CB HB3 sing N N 123 HIS CG ND1 sing Y N 124 HIS CG CD2 doub Y N 125 HIS ND1 CE1 doub Y N 126 HIS ND1 HD1 sing N N 127 HIS CD2 NE2 sing Y N 128 HIS CD2 HD2 sing N N 129 HIS CE1 NE2 sing Y N 130 HIS CE1 HE1 sing N N 131 HIS NE2 HE2 sing N N 132 HIS OXT HXT sing N N 133 HOH O H1 sing N N 134 HOH O H2 sing N N 135 ILE N CA sing N N 136 ILE N H sing N N 137 ILE N H2 sing N N 138 ILE CA C sing N N 139 ILE CA CB sing N N 140 ILE CA HA sing N N 141 ILE C O doub N N 142 ILE C OXT sing N N 143 ILE CB CG1 sing N N 144 ILE CB CG2 sing N N 145 ILE CB HB sing N N 146 ILE CG1 CD1 sing N N 147 ILE CG1 HG12 sing N N 148 ILE CG1 HG13 sing N N 149 ILE CG2 HG21 sing N N 150 ILE CG2 HG22 sing N N 151 ILE CG2 HG23 sing N N 152 ILE CD1 HD11 sing N N 153 ILE CD1 HD12 sing N N 154 ILE CD1 HD13 sing N N 155 ILE OXT HXT sing N N 156 LEU N CA sing N N 157 LEU N H sing N N 158 LEU N H2 sing N N 159 LEU CA C sing N N 160 LEU CA CB sing N N 161 LEU CA HA sing N N 162 LEU C O doub N N 163 LEU C OXT sing N N 164 LEU CB CG sing N N 165 LEU CB HB2 sing N N 166 LEU CB HB3 sing N N 167 LEU CG CD1 sing N N 168 LEU CG CD2 sing N N 169 LEU CG HG sing N N 170 LEU CD1 HD11 sing N N 171 LEU CD1 HD12 sing N N 172 LEU CD1 HD13 sing N N 173 LEU CD2 HD21 sing N N 174 LEU CD2 HD22 sing N N 175 LEU CD2 HD23 sing N N 176 LEU OXT HXT sing N N 177 LYS N CA sing N N 178 LYS N H sing N N 179 LYS N H2 sing N N 180 LYS CA C sing N N 181 LYS CA CB sing N N 182 LYS CA HA sing N N 183 LYS C O doub N N 184 LYS C OXT sing N N 185 LYS CB CG sing N N 186 LYS CB HB2 sing N N 187 LYS CB HB3 sing N N 188 LYS CG CD sing N N 189 LYS CG HG2 sing N N 190 LYS CG HG3 sing N N 191 LYS CD CE sing N N 192 LYS CD HD2 sing N N 193 LYS CD HD3 sing N N 194 LYS CE NZ sing N N 195 LYS CE HE2 sing N N 196 LYS CE HE3 sing N N 197 LYS NZ HZ1 sing N N 198 LYS NZ HZ2 sing N N 199 LYS NZ HZ3 sing N N 200 LYS OXT HXT sing N N 201 MET N CA sing N N 202 MET N H sing N N 203 MET N H2 sing N N 204 MET CA C sing N N 205 MET CA CB sing N N 206 MET CA HA sing N N 207 MET C O doub N N 208 MET C OXT sing N N 209 MET CB CG sing N N 210 MET CB HB2 sing N N 211 MET CB HB3 sing N N 212 MET CG SD sing N N 213 MET CG HG2 sing N N 214 MET CG HG3 sing N N 215 MET SD CE sing N N 216 MET CE HE1 sing N N 217 MET CE HE2 sing N N 218 MET CE HE3 sing N N 219 MET OXT HXT sing N N 220 MPD C1 C2 sing N N 221 MPD C1 H11 sing N N 222 MPD C1 H12 sing N N 223 MPD C1 H13 sing N N 224 MPD C2 O2 sing N N 225 MPD C2 CM sing N N 226 MPD C2 C3 sing N N 227 MPD O2 HO2 sing N N 228 MPD CM HM1 sing N N 229 MPD CM HM2 sing N N 230 MPD CM HM3 sing N N 231 MPD C3 C4 sing N N 232 MPD C3 H31 sing N N 233 MPD C3 H32 sing N N 234 MPD C4 O4 sing N N 235 MPD C4 C5 sing N N 236 MPD C4 H4 sing N N 237 MPD O4 HO4 sing N N 238 MPD C5 H51 sing N N 239 MPD C5 H52 sing N N 240 MPD C5 H53 sing N N 241 PRO N CA sing N N 242 PRO N CD sing N N 243 PRO N H sing N N 244 PRO CA C sing N N 245 PRO CA CB sing N N 246 PRO CA HA sing N N 247 PRO C O doub N N 248 PRO C OXT sing N N 249 PRO CB CG sing N N 250 PRO CB HB2 sing N N 251 PRO CB HB3 sing N N 252 PRO CG CD sing N N 253 PRO CG HG2 sing N N 254 PRO CG HG3 sing N N 255 PRO CD HD2 sing N N 256 PRO CD HD3 sing N N 257 PRO OXT HXT sing N N 258 SER N CA sing N N 259 SER N H sing N N 260 SER N H2 sing N N 261 SER CA C sing N N 262 SER CA CB sing N N 263 SER CA HA sing N N 264 SER C O doub N N 265 SER C OXT sing N N 266 SER CB OG sing N N 267 SER CB HB2 sing N N 268 SER CB HB3 sing N N 269 SER OG HG sing N N 270 SER OXT HXT sing N N 271 THR N CA sing N N 272 THR N H sing N N 273 THR N H2 sing N N 274 THR CA C sing N N 275 THR CA CB sing N N 276 THR CA HA sing N N 277 THR C O doub N N 278 THR C OXT sing N N 279 THR CB OG1 sing N N 280 THR CB CG2 sing N N 281 THR CB HB sing N N 282 THR OG1 HG1 sing N N 283 THR CG2 HG21 sing N N 284 THR CG2 HG22 sing N N 285 THR CG2 HG23 sing N N 286 THR OXT HXT sing N N 287 TRP N CA sing N N 288 TRP N H sing N N 289 TRP N H2 sing N N 290 TRP CA C sing N N 291 TRP CA CB sing N N 292 TRP CA HA sing N N 293 TRP C O doub N N 294 TRP C OXT sing N N 295 TRP CB CG sing N N 296 TRP CB HB2 sing N N 297 TRP CB HB3 sing N N 298 TRP CG CD1 doub Y N 299 TRP CG CD2 sing Y N 300 TRP CD1 NE1 sing Y N 301 TRP CD1 HD1 sing N N 302 TRP CD2 CE2 doub Y N 303 TRP CD2 CE3 sing Y N 304 TRP NE1 CE2 sing Y N 305 TRP NE1 HE1 sing N N 306 TRP CE2 CZ2 sing Y N 307 TRP CE3 CZ3 doub Y N 308 TRP CE3 HE3 sing N N 309 TRP CZ2 CH2 doub Y N 310 TRP CZ2 HZ2 sing N N 311 TRP CZ3 CH2 sing Y N 312 TRP CZ3 HZ3 sing N N 313 TRP CH2 HH2 sing N N 314 TRP OXT HXT sing N N 315 TYR N CA sing N N 316 TYR N H sing N N 317 TYR N H2 sing N N 318 TYR CA C sing N N 319 TYR CA CB sing N N 320 TYR CA HA sing N N 321 TYR C O doub N N 322 TYR C OXT sing N N 323 TYR CB CG sing N N 324 TYR CB HB2 sing N N 325 TYR CB HB3 sing N N 326 TYR CG CD1 doub Y N 327 TYR CG CD2 sing Y N 328 TYR CD1 CE1 sing Y N 329 TYR CD1 HD1 sing N N 330 TYR CD2 CE2 doub Y N 331 TYR CD2 HD2 sing N N 332 TYR CE1 CZ doub Y N 333 TYR CE1 HE1 sing N N 334 TYR CE2 CZ sing Y N 335 TYR CE2 HE2 sing N N 336 TYR CZ OH sing N N 337 TYR OH HH sing N N 338 TYR OXT HXT sing N N 339 VAL N CA sing N N 340 VAL N H sing N N 341 VAL N H2 sing N N 342 VAL CA C sing N N 343 VAL CA CB sing N N 344 VAL CA HA sing N N 345 VAL C O doub N N 346 VAL C OXT sing N N 347 VAL CB CG1 sing N N 348 VAL CB CG2 sing N N 349 VAL CB HB sing N N 350 VAL CG1 HG11 sing N N 351 VAL CG1 HG12 sing N N 352 VAL CG1 HG13 sing N N 353 VAL CG2 HG21 sing N N 354 VAL CG2 HG22 sing N N 355 VAL CG2 HG23 sing N N 356 VAL OXT HXT sing N N 357 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VPF _pdbx_initial_refinement_model.details 'PDB ENTRY 2VPF' #