HEADER OXIDOREDUCTASE 16-FEB-06 2CF5 TITLE CRYSTAL STRUCTURES OF THE ARABIDOPSIS CINNAMYL ALCOHOL DEHYDROGENASES, TITLE 2 ATCAD5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CINNAMYL ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATCCAD5, CAD; COMPND 5 EC: 1.1.1.195; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET VECTOR; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET151D-TOPO TA VECTOR KEYWDS LIGNIN BIOSYNTHESIS, METAL-BINDING, NADP, OXIDOREDUCTASE, ZINC EXPDTA X-RAY DIFFRACTION AUTHOR B.YOUN,R.CAMACHO,S.MOINUDDIN,C.LEE,L.B.DAVIN,N.G.LEWIS,C.KANG REVDAT 4 13-DEC-23 2CF5 1 REMARK LINK REVDAT 3 11-MAR-20 2CF5 1 REMARK REVDAT 2 24-FEB-09 2CF5 1 VERSN REVDAT 1 20-FEB-07 2CF5 0 JRNL AUTH B.YOUN,R.CAMACHO,S.MOINUDDIN,C.LEE,L.B.DAVIN,N.G.LEWIS, JRNL AUTH 2 C.KANG JRNL TITL CRYSTAL STRUCTURES AND CATALYTIC MECHANISMS OF THE JRNL TITL 2 ARABIDOPSIS CINNAMYL ALCOHOL DEHYDROGENASES ATCAD5 AND JRNL TITL 3 ATCAD4 JRNL REF ORG.BIOMOL.CHEM. V. 4 1687 2006 JRNL REFN ISSN 1477-0520 JRNL PMID 16633561 JRNL DOI 10.1039/B601672C REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 25958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2665 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 3.019 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1290027781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 277.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07812 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32473 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1UUF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 156.49500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 27.11000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.24750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 27.11000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 234.74250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.11000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 78.24750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 27.11000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.11000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 234.74250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 156.49500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 108.44000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 108.44000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 156.49500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ILE A 3 REMARK 465 MET A 4 REMARK 465 GLU A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 6 CB REMARK 470 GLU A 7 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 52 NE2 HIS A 52 CD2 -0.068 REMARK 500 HIS A 69 NE2 HIS A 69 CD2 -0.076 REMARK 500 HIS A 255 NE2 HIS A 255 CD2 -0.072 REMARK 500 HIS A 256 NE2 HIS A 256 CD2 -0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 13 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 13 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 THR A 54 CA - CB - CG2 ANGL. DEV. = 8.9 DEGREES REMARK 500 LEU A 58 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 VAL A 75 CG1 - CB - CG2 ANGL. DEV. = -9.8 DEGREES REMARK 500 TRP A 119 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP A 119 CE2 - CD2 - CG ANGL. DEV. = -5.9 DEGREES REMARK 500 LYS A 266 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 MET A 274 CG - SD - CE ANGL. DEV. = -12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 8 167.37 70.99 REMARK 500 PRO A 18 -4.07 -54.76 REMARK 500 ASN A 56 -69.17 73.16 REMARK 500 ASP A 57 -69.33 50.90 REMARK 500 LEU A 58 9.53 -69.01 REMARK 500 PRO A 67 -163.40 -73.39 REMARK 500 GLU A 70 60.66 -118.84 REMARK 500 SER A 83 -6.50 -143.21 REMARK 500 LYS A 116 52.97 -111.40 REMARK 500 ASN A 122 4.80 51.79 REMARK 500 ASP A 123 -157.01 -110.35 REMARK 500 PHE A 135 37.91 -83.78 REMARK 500 CYS A 163 -70.30 -116.53 REMARK 500 LEU A 189 57.98 -114.46 REMARK 500 SER A 211 -140.96 -141.53 REMARK 500 SER A 212 -3.11 -151.13 REMARK 500 ASP A 228 152.63 50.80 REMARK 500 ALA A 242 -16.18 -33.44 REMARK 500 ASP A 243 42.91 -161.14 REMARK 500 ASN A 278 1.61 -67.97 REMARK 500 ILE A 300 -147.69 23.75 REMARK 500 TYR A 344 -81.16 68.47 REMARK 500 ASP A 356 88.10 -151.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2005 DISTANCE = 7.97 ANGSTROMS REMARK 525 HOH A2007 DISTANCE = 8.03 ANGSTROMS REMARK 525 HOH A2008 DISTANCE = 8.09 ANGSTROMS REMARK 525 HOH A2009 DISTANCE = 9.20 ANGSTROMS REMARK 525 HOH A2010 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH A2012 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A2013 DISTANCE = 9.21 ANGSTROMS REMARK 525 HOH A2018 DISTANCE = 8.22 ANGSTROMS REMARK 525 HOH A2019 DISTANCE = 10.39 ANGSTROMS REMARK 525 HOH A2022 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH A2026 DISTANCE = 8.95 ANGSTROMS REMARK 525 HOH A2041 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH A2042 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH A2044 DISTANCE = 7.92 ANGSTROMS REMARK 525 HOH A2055 DISTANCE = 8.02 ANGSTROMS REMARK 525 HOH A2058 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A2060 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A2062 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A2078 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A2079 DISTANCE = 8.46 ANGSTROMS REMARK 525 HOH A2084 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A2105 DISTANCE = 6.27 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 47 SG REMARK 620 2 HIS A 69 NE2 88.1 REMARK 620 3 GLU A 70 OE1 96.8 116.4 REMARK 620 4 CYS A 163 SG 127.6 95.2 126.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 100 SG REMARK 620 2 CYS A 103 SG 97.2 REMARK 620 3 CYS A 106 SG 117.1 111.8 REMARK 620 4 CYS A 114 SG 109.4 113.5 107.7 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CF6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF THE ARABIDOPSIS CINNAMYL ALCOHOL REMARK 900 DEHYDROGENASES, ATCAD5 DBREF 2CF5 A 1 357 UNP O49482 CADH2_ARATH 1 357 SEQRES 1 A 357 MET GLY ILE MET GLU ALA GLU ARG LYS THR THR GLY TRP SEQRES 2 A 357 ALA ALA ARG ASP PRO SER GLY ILE LEU SER PRO TYR THR SEQRES 3 A 357 TYR THR LEU ARG GLU THR GLY PRO GLU ASP VAL ASN ILE SEQRES 4 A 357 ARG ILE ILE CYS CYS GLY ILE CYS HIS THR ASP LEU HIS SEQRES 5 A 357 GLN THR LYS ASN ASP LEU GLY MET SER ASN TYR PRO MET SEQRES 6 A 357 VAL PRO GLY HIS GLU VAL VAL GLY GLU VAL VAL GLU VAL SEQRES 7 A 357 GLY SER ASP VAL SER LYS PHE THR VAL GLY ASP ILE VAL SEQRES 8 A 357 GLY VAL GLY CYS LEU VAL GLY CYS CYS GLY GLY CYS SER SEQRES 9 A 357 PRO CYS GLU ARG ASP LEU GLU GLN TYR CYS PRO LYS LYS SEQRES 10 A 357 ILE TRP SER TYR ASN ASP VAL TYR ILE ASN GLY GLN PRO SEQRES 11 A 357 THR GLN GLY GLY PHE ALA LYS ALA THR VAL VAL HIS GLN SEQRES 12 A 357 LYS PHE VAL VAL LYS ILE PRO GLU GLY MET ALA VAL GLU SEQRES 13 A 357 GLN ALA ALA PRO LEU LEU CYS ALA GLY VAL THR VAL TYR SEQRES 14 A 357 SER PRO LEU SER HIS PHE GLY LEU LYS GLN PRO GLY LEU SEQRES 15 A 357 ARG GLY GLY ILE LEU GLY LEU GLY GLY VAL GLY HIS MET SEQRES 16 A 357 GLY VAL LYS ILE ALA LYS ALA MET GLY HIS HIS VAL THR SEQRES 17 A 357 VAL ILE SER SER SER ASN LYS LYS ARG GLU GLU ALA LEU SEQRES 18 A 357 GLN ASP LEU GLY ALA ASP ASP TYR VAL ILE GLY SER ASP SEQRES 19 A 357 GLN ALA LYS MET SER GLU LEU ALA ASP SER LEU ASP TYR SEQRES 20 A 357 VAL ILE ASP THR VAL PRO VAL HIS HIS ALA LEU GLU PRO SEQRES 21 A 357 TYR LEU SER LEU LEU LYS LEU ASP GLY LYS LEU ILE LEU SEQRES 22 A 357 MET GLY VAL ILE ASN ASN PRO LEU GLN PHE LEU THR PRO SEQRES 23 A 357 LEU LEU MET LEU GLY ARG LYS VAL ILE THR GLY SER PHE SEQRES 24 A 357 ILE GLY SER MET LYS GLU THR GLU GLU MET LEU GLU PHE SEQRES 25 A 357 CYS LYS GLU LYS GLY LEU SER SER ILE ILE GLU VAL VAL SEQRES 26 A 357 LYS MET ASP TYR VAL ASN THR ALA PHE GLU ARG LEU GLU SEQRES 27 A 357 LYS ASN ASP VAL ARG TYR ARG PHE VAL VAL ASP VAL GLU SEQRES 28 A 357 GLY SER ASN LEU ASP ALA HET ZN A 401 1 HET ZN A 402 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) FORMUL 4 HOH *199(H2 O) HELIX 1 1 CYS A 47 LYS A 55 1 9 HELIX 2 2 CYS A 103 ARG A 108 1 6 HELIX 3 3 LEU A 110 CYS A 114 5 5 HELIX 4 4 ALA A 154 ALA A 159 1 6 HELIX 5 5 PRO A 160 LEU A 162 5 3 HELIX 6 6 CYS A 163 PHE A 175 1 13 HELIX 7 7 GLY A 190 MET A 203 1 14 HELIX 8 8 LYS A 215 GLN A 222 1 8 HELIX 9 9 ASP A 234 LEU A 241 1 8 HELIX 10 10 LEU A 258 SER A 263 1 6 HELIX 11 11 LEU A 284 ARG A 292 1 9 HELIX 12 12 SER A 302 LYS A 316 1 15 HELIX 13 13 TYR A 329 LYS A 339 1 11 SHEET 1 AA 2 LYS A 9 ALA A 15 0 SHEET 2 AA 2 LEU A 22 THR A 28 -1 O SER A 23 N ALA A 14 SHEET 1 AB 5 THR A 139 HIS A 142 0 SHEET 2 AB 5 ASP A 36 ILE A 46 -1 O VAL A 37 N VAL A 141 SHEET 3 AB 5 GLU A 70 VAL A 78 -1 O GLU A 70 N GLY A 45 SHEET 4 AB 5 ILE A 90 VAL A 93 -1 O VAL A 91 N GLY A 73 SHEET 5 AB 5 VAL A 146 LYS A 148 -1 O VAL A 147 N GLY A 92 SHEET 1 AC 4 THR A 139 HIS A 142 0 SHEET 2 AC 4 ASP A 36 ILE A 46 -1 O VAL A 37 N VAL A 141 SHEET 3 AC 4 ARG A 345 ASP A 349 -1 O PHE A 346 N ILE A 46 SHEET 4 AC 4 ILE A 322 LYS A 326 1 O GLU A 323 N VAL A 347 SHEET 1 AD 2 LEU A 96 GLY A 98 0 SHEET 2 AD 2 ILE A 118 TRP A 119 -1 O ILE A 118 N VAL A 97 SHEET 1 AE 6 TYR A 229 ILE A 231 0 SHEET 2 AE 6 HIS A 206 SER A 211 1 O VAL A 209 N VAL A 230 SHEET 3 AE 6 ARG A 183 LEU A 187 1 O GLY A 184 N THR A 208 SHEET 4 AE 6 LEU A 245 ASP A 250 1 N ASP A 246 O ARG A 183 SHEET 5 AE 6 LEU A 265 LEU A 273 1 N LYS A 266 O LEU A 245 SHEET 6 AE 6 VAL A 294 GLY A 297 1 O VAL A 294 N LEU A 271 LINK SG CYS A 47 ZN ZN A 402 1555 1555 2.44 LINK NE2 HIS A 69 ZN ZN A 402 1555 1555 2.46 LINK OE1 GLU A 70 ZN ZN A 402 1555 1555 2.63 LINK SG CYS A 100 ZN ZN A 401 1555 1555 2.46 LINK SG CYS A 103 ZN ZN A 401 1555 1555 2.69 LINK SG CYS A 106 ZN ZN A 401 1555 1555 2.48 LINK SG CYS A 114 ZN ZN A 401 1555 1555 2.54 LINK SG CYS A 163 ZN ZN A 402 1555 1555 2.47 CISPEP 1 TYR A 63 PRO A 64 0 -0.79 SITE 1 AC1 4 CYS A 100 CYS A 103 CYS A 106 CYS A 114 SITE 1 AC2 4 CYS A 47 HIS A 69 GLU A 70 CYS A 163 CRYST1 54.220 54.220 312.990 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018443 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003195 0.00000