HEADER LYASE/TRANSFERASE 28-FEB-06 2CG8 TITLE THE BIFUNCTIONAL DIHYDRONEOPTERIN ALDOLASE 6-HYDROXYMETHYL-7,8- TITLE 2 DIHYDROPTERIN SYNTHASE FROM STREPTOCOCCUS PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDRONEOPTERIN ALDOLASE 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN COMPND 3 SYNTHASE; COMPND 4 CHAIN: A, B, C, D; COMPND 5 SYNONYM: DIHYDRONEOPTERIN ALDOLASE, DHNA, 2-AMINO-4-HYDROXY-6- COMPND 6 HYDROXYMETHYLDIHYDROPTERIDINE PYROPHOSPHOKINASE, 7,8-DIHYDRO-6- COMPND 7 HYDROXYMETHYLPTERIN PYROPHOSPHOKINASE, 6-HYDROXYMETHYL-7,8- COMPND 8 DIHYDROPTERIN PYROPHOSPHOKINASE, HPPK, PPPK; COMPND 9 EC: 4.1.2.25, 2.7.6.3; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYASE/TRANSFERASE, ALDOLASE, FOLATE BIOSYNTHESIS, PYROPHOSPHOKINASE, KEYWDS 2 LYASE, MULTIFUNCTIONAL ENZYME, TRANSFERASE, LYASE-TRANSFERASE KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.GARCON,C.LEVY,J.P.DERRICK REVDAT 4 13-DEC-23 2CG8 1 REMARK REVDAT 3 24-FEB-09 2CG8 1 VERSN REVDAT 2 12-JUL-06 2CG8 1 JRNL REVDAT 1 21-JUN-06 2CG8 0 JRNL AUTH A.GARCON,C.LEVY,J.P.DERRICK JRNL TITL CRYSTAL STRUCTURE OF THE BIFUNCTIONAL DIHYDRONEOPTERIN JRNL TITL 2 ALDOLASE/6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE JRNL TITL 3 FROM STREPTOCOCCUS PNEUMONIAE. JRNL REF J.MOL.BIOL. V. 360 644 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16781731 JRNL DOI 10.1016/J.JMB.2006.05.038 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 127.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 57383 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3059 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4209 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE SET COUNT : 207 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7968 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.34000 REMARK 3 B22 (A**2) : 1.34000 REMARK 3 B33 (A**2) : -2.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.355 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.265 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.764 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8130 ; 0.040 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11018 ; 3.164 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 966 ; 7.290 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 379 ;41.766 ;24.828 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1482 ;20.571 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;17.811 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1271 ; 0.179 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6010 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3503 ; 0.291 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5679 ; 0.363 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 425 ; 0.164 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 79 ; 0.266 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.153 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5038 ; 1.738 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7949 ; 2.576 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3523 ; 2.258 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3069 ; 3.287 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 5 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 43 4 REMARK 3 1 B 1 B 43 4 REMARK 3 1 C 1 C 43 4 REMARK 3 1 D 1 D 43 4 REMARK 3 2 A 51 A 129 4 REMARK 3 2 B 51 B 129 4 REMARK 3 2 C 51 C 129 4 REMARK 3 2 D 51 D 129 4 REMARK 3 3 A 140 A 156 4 REMARK 3 3 B 140 B 156 4 REMARK 3 3 C 140 C 156 4 REMARK 3 3 D 140 D 156 4 REMARK 3 4 A 172 A 199 4 REMARK 3 4 B 172 B 199 4 REMARK 3 4 C 172 C 199 4 REMARK 3 4 D 172 D 199 4 REMARK 3 5 A 213 A 265 4 REMARK 3 5 B 213 B 265 4 REMARK 3 5 C 213 C 265 4 REMARK 3 5 D 213 D 265 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1798 ; 0.18 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1798 ; 0.23 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1798 ; 0.21 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1798 ; 0.29 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1798 ; 1.35 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1798 ; 1.52 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1798 ; 1.33 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1798 ; 1.48 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 43 REMARK 3 RESIDUE RANGE : A 51 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): -29.4719 -48.5383 -12.8108 REMARK 3 T TENSOR REMARK 3 T11: -0.1613 T22: -0.1048 REMARK 3 T33: -0.1928 T12: 0.0355 REMARK 3 T13: 0.0483 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 1.7106 L22: 3.6593 REMARK 3 L33: 2.2302 L12: 1.3979 REMARK 3 L13: -0.6547 L23: -0.9512 REMARK 3 S TENSOR REMARK 3 S11: -0.0526 S12: 0.0548 S13: -0.1454 REMARK 3 S21: -0.1863 S22: 0.0059 S23: -0.2365 REMARK 3 S31: 0.2624 S32: 0.0685 S33: 0.0466 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 159 REMARK 3 RESIDUE RANGE : A 170 A 200 REMARK 3 RESIDUE RANGE : A 211 A 267 REMARK 3 ORIGIN FOR THE GROUP (A): -49.9057 -73.0863 -16.7458 REMARK 3 T TENSOR REMARK 3 T11: 0.0095 T22: -0.0878 REMARK 3 T33: -0.1243 T12: 0.0164 REMARK 3 T13: -0.0533 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 3.0192 L22: 4.0684 REMARK 3 L33: 3.9613 L12: 0.1684 REMARK 3 L13: -0.6182 L23: -0.6328 REMARK 3 S TENSOR REMARK 3 S11: -0.1573 S12: 0.2740 S13: -0.4263 REMARK 3 S21: -0.5899 S22: 0.0773 S23: -0.2134 REMARK 3 S31: 0.4355 S32: 0.0996 S33: 0.0799 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 44 REMARK 3 RESIDUE RANGE : B 49 B 120 REMARK 3 ORIGIN FOR THE GROUP (A): -30.3596 -47.8732 13.6580 REMARK 3 T TENSOR REMARK 3 T11: -0.0980 T22: -0.1341 REMARK 3 T33: -0.1923 T12: 0.0357 REMARK 3 T13: -0.0366 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.6435 L22: 1.8812 REMARK 3 L33: 1.6167 L12: 0.8848 REMARK 3 L13: -0.6877 L23: -0.0686 REMARK 3 S TENSOR REMARK 3 S11: 0.0716 S12: -0.2792 S13: -0.1611 REMARK 3 S21: 0.2027 S22: -0.0188 S23: -0.0315 REMARK 3 S31: 0.1013 S32: 0.0691 S33: -0.0528 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 121 B 160 REMARK 3 RESIDUE RANGE : B 169 B 200 REMARK 3 RESIDUE RANGE : B 209 B 267 REMARK 3 ORIGIN FOR THE GROUP (A): -49.4530 -73.5962 16.4347 REMARK 3 T TENSOR REMARK 3 T11: -0.0753 T22: -0.1581 REMARK 3 T33: -0.2054 T12: 0.0263 REMARK 3 T13: -0.0092 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 2.8109 L22: 2.7433 REMARK 3 L33: 2.7193 L12: -0.0377 REMARK 3 L13: 0.1429 L23: -1.1241 REMARK 3 S TENSOR REMARK 3 S11: 0.0506 S12: -0.1162 S13: -0.0887 REMARK 3 S21: -0.0428 S22: -0.0660 S23: -0.1280 REMARK 3 S31: 0.0694 S32: -0.0003 S33: 0.0154 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 120 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6300 -29.5164 -7.5141 REMARK 3 T TENSOR REMARK 3 T11: -0.1544 T22: -0.1260 REMARK 3 T33: -0.1022 T12: 0.0552 REMARK 3 T13: 0.0249 T23: -0.0688 REMARK 3 L TENSOR REMARK 3 L11: 1.0940 L22: 2.5330 REMARK 3 L33: 2.6635 L12: 0.4815 REMARK 3 L13: -0.4312 L23: -1.5668 REMARK 3 S TENSOR REMARK 3 S11: -0.0036 S12: -0.0008 S13: -0.1075 REMARK 3 S21: -0.1182 S22: 0.0022 S23: -0.2563 REMARK 3 S31: 0.1124 S32: 0.2197 S33: 0.0015 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 121 C 159 REMARK 3 RESIDUE RANGE : C 170 C 200 REMARK 3 RESIDUE RANGE : C 210 C 267 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4856 -11.3331 -6.9858 REMARK 3 T TENSOR REMARK 3 T11: -0.1187 T22: 0.1727 REMARK 3 T33: 0.0638 T12: -0.0559 REMARK 3 T13: 0.0232 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 2.9783 L22: 4.7794 REMARK 3 L33: 2.7008 L12: 0.9236 REMARK 3 L13: -0.7019 L23: -0.6643 REMARK 3 S TENSOR REMARK 3 S11: -0.0830 S12: 0.0226 S13: -0.1414 REMARK 3 S21: -0.1860 S22: 0.0119 S23: -0.6119 REMARK 3 S31: 0.0192 S32: 0.5885 S33: 0.0711 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 44 REMARK 3 RESIDUE RANGE : D 49 D 120 REMARK 3 ORIGIN FOR THE GROUP (A): -22.5922 -12.8372 -17.1371 REMARK 3 T TENSOR REMARK 3 T11: -0.1418 T22: -0.0785 REMARK 3 T33: -0.1926 T12: -0.0076 REMARK 3 T13: 0.0256 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 1.0438 L22: 4.6092 REMARK 3 L33: 2.0145 L12: 0.8770 REMARK 3 L13: 0.1571 L23: 0.8233 REMARK 3 S TENSOR REMARK 3 S11: -0.0464 S12: 0.0730 S13: 0.1141 REMARK 3 S21: -0.0935 S22: 0.0432 S23: 0.1950 REMARK 3 S31: -0.2999 S32: -0.0554 S33: 0.0032 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 121 D 158 REMARK 3 RESIDUE RANGE : D 170 D 200 REMARK 3 RESIDUE RANGE : D 207 D 267 REMARK 3 ORIGIN FOR THE GROUP (A): -0.1799 9.4605 -22.7838 REMARK 3 T TENSOR REMARK 3 T11: 0.0691 T22: 0.0033 REMARK 3 T33: 0.0189 T12: -0.0779 REMARK 3 T13: 0.0808 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 2.5744 L22: 2.5106 REMARK 3 L33: 2.3794 L12: 0.3619 REMARK 3 L13: 0.4468 L23: 0.3705 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: 0.2512 S13: 0.3271 REMARK 3 S21: -0.2949 S22: -0.0787 S23: -0.0870 REMARK 3 S31: -0.3386 S32: 0.2006 S33: 0.0254 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2CG8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1290027873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62341 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.870 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.76 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, CNS REMARK 200 STARTING MODEL: PDB ENTRY 1NBU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 119.37000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 74.72000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 74.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.68500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 74.72000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 74.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 179.05500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 74.72000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.72000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 59.68500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 74.72000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.72000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 179.05500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 119.37000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE QUATERNARY STRUCTURE WAS STUDIED BY REMARK 300 LOPEZ ET AL 1993J BACTERIOL 175, 2214-2220, WHO REMARK 300 CONCLUDED THAT IT IS ATETRAMER, BUT SUBSEQUENT REMARK 300 STRUCTURES OF RELATED ALDOLASESFROM S. AUREUS AND REMARK 300 M. TUBERCULOSIS HAVE ESTABLISHED THATAN OCTAMER IS REMARK 300 MORE LIKELY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 44 REMARK 465 LEU A 45 REMARK 465 ASP A 46 REMARK 465 LEU A 47 REMARK 465 THR A 48 REMARK 465 ALA A 49 REMARK 465 SER A 50 REMARK 465 THR A 160 REMARK 465 GLU A 161 REMARK 465 PRO A 162 REMARK 465 TRP A 163 REMARK 465 GLY A 164 REMARK 465 GLY A 165 REMARK 465 VAL A 166 REMARK 465 GLU A 167 REMARK 465 GLN A 168 REMARK 465 ASP A 169 REMARK 465 VAL A 201 REMARK 465 ARG A 202 REMARK 465 GLU A 203 REMARK 465 VAL A 204 REMARK 465 HIS A 205 REMARK 465 TRP A 206 REMARK 465 GLY A 207 REMARK 465 PRO A 208 REMARK 465 ARG A 209 REMARK 465 LEU A 210 REMARK 465 LYS A 269 REMARK 465 LYS A 270 REMARK 465 LEU B 45 REMARK 465 ASP B 46 REMARK 465 LEU B 47 REMARK 465 THR B 48 REMARK 465 GLU B 161 REMARK 465 PRO B 162 REMARK 465 TRP B 163 REMARK 465 GLY B 164 REMARK 465 GLY B 165 REMARK 465 VAL B 166 REMARK 465 GLU B 167 REMARK 465 GLN B 168 REMARK 465 VAL B 201 REMARK 465 ARG B 202 REMARK 465 GLU B 203 REMARK 465 VAL B 204 REMARK 465 HIS B 205 REMARK 465 TRP B 206 REMARK 465 GLY B 207 REMARK 465 PRO B 208 REMARK 465 LYS B 269 REMARK 465 LYS B 270 REMARK 465 THR C 160 REMARK 465 GLU C 161 REMARK 465 PRO C 162 REMARK 465 TRP C 163 REMARK 465 GLY C 164 REMARK 465 GLY C 165 REMARK 465 VAL C 166 REMARK 465 GLU C 167 REMARK 465 GLN C 168 REMARK 465 ASP C 169 REMARK 465 VAL C 201 REMARK 465 ARG C 202 REMARK 465 GLU C 203 REMARK 465 VAL C 204 REMARK 465 HIS C 205 REMARK 465 TRP C 206 REMARK 465 GLY C 207 REMARK 465 PRO C 208 REMARK 465 ARG C 209 REMARK 465 LYS C 269 REMARK 465 LYS C 270 REMARK 465 LEU D 45 REMARK 465 ASP D 46 REMARK 465 LEU D 47 REMARK 465 THR D 48 REMARK 465 ALA D 159 REMARK 465 THR D 160 REMARK 465 GLU D 161 REMARK 465 PRO D 162 REMARK 465 TRP D 163 REMARK 465 GLY D 164 REMARK 465 GLY D 165 REMARK 465 VAL D 166 REMARK 465 GLU D 167 REMARK 465 GLN D 168 REMARK 465 ASP D 169 REMARK 465 ARG D 202 REMARK 465 GLU D 203 REMARK 465 VAL D 204 REMARK 465 HIS D 205 REMARK 465 TRP D 206 REMARK 465 LYS D 269 REMARK 465 LYS D 270 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 268 CA C O CB CG CD1 CD2 REMARK 470 LEU B 268 CA C O CB CG CD1 CD2 REMARK 470 LEU C 268 CA C O CB CG CD1 CD2 REMARK 470 VAL D 201 CA C O CB CG1 CG2 REMARK 470 LEU D 268 CA C O CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP D 37 CG2 THR D 39 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 17 CG LEU A 17 CD1 0.270 REMARK 500 TYR A 53 CE2 TYR A 53 CD2 -0.094 REMARK 500 GLN A 58 CG GLN A 58 CD 0.144 REMARK 500 GLU A 81 CB GLU A 81 CG -0.117 REMARK 500 GLU A 85 CG GLU A 85 CD 0.114 REMARK 500 LYS A 153 CG LYS A 153 CD 0.294 REMARK 500 LYS A 153 CD LYS A 153 CE 0.219 REMARK 500 PHE A 171 CG PHE A 171 CD1 0.096 REMARK 500 PHE A 171 CZ PHE A 171 CE2 0.134 REMARK 500 VAL A 176 CB VAL A 176 CG1 -0.140 REMARK 500 TRP A 181 CG TRP A 181 CD1 0.160 REMARK 500 TRP A 181 CE2 TRP A 181 CD2 0.116 REMARK 500 TRP A 181 CZ3 TRP A 181 CH2 0.109 REMARK 500 VAL A 218 CB VAL A 218 CG1 -0.170 REMARK 500 GLU A 219 CD GLU A 219 OE1 0.078 REMARK 500 GLU A 219 CD GLU A 219 OE2 0.122 REMARK 500 TYR A 224 CE1 TYR A 224 CZ -0.081 REMARK 500 GLU A 237 CD GLU A 237 OE2 0.070 REMARK 500 PHE A 240 CD1 PHE A 240 CE1 0.197 REMARK 500 PHE A 240 CE2 PHE A 240 CD2 0.149 REMARK 500 GLU A 247 CD GLU A 247 OE1 0.069 REMARK 500 ALA B 32 CA ALA B 32 CB -0.135 REMARK 500 TYR B 53 CE2 TYR B 53 CD2 -0.094 REMARK 500 GLU B 55 CG GLU B 55 CD 0.121 REMARK 500 GLU B 55 CD GLU B 55 OE2 0.075 REMARK 500 GLU B 66 CD GLU B 66 OE1 0.101 REMARK 500 GLU B 81 CB GLU B 81 CG -0.125 REMARK 500 GLU B 85 CG GLU B 85 CD 0.123 REMARK 500 VAL B 104 CB VAL B 104 CG1 -0.141 REMARK 500 VAL B 113 CB VAL B 113 CG1 -0.127 REMARK 500 LYS B 138 CD LYS B 138 CE 0.164 REMARK 500 LYS B 138 CE LYS B 138 NZ 0.215 REMARK 500 LYS B 153 CG LYS B 153 CD 0.277 REMARK 500 LYS B 153 CD LYS B 153 CE 0.174 REMARK 500 LYS B 153 CE LYS B 153 NZ 0.152 REMARK 500 GLU B 154 CB GLU B 154 CG -0.117 REMARK 500 SER B 156 CB SER B 156 OG -0.094 REMARK 500 VAL B 176 CB VAL B 176 CG1 -0.156 REMARK 500 GLU B 179 CD GLU B 179 OE1 0.090 REMARK 500 GLU B 179 CD GLU B 179 OE2 0.079 REMARK 500 TRP B 181 CG TRP B 181 CD1 0.105 REMARK 500 TRP B 181 CE2 TRP B 181 CD2 0.124 REMARK 500 TRP B 181 CZ3 TRP B 181 CH2 0.128 REMARK 500 GLU B 197 CD GLU B 197 OE1 0.072 REMARK 500 ARG B 209 N ARG B 209 CA 0.157 REMARK 500 ARG B 209 CZ ARG B 209 NH2 0.092 REMARK 500 GLU B 219 CD GLU B 219 OE1 0.070 REMARK 500 GLU B 219 CD GLU B 219 OE2 0.089 REMARK 500 GLU B 237 CD GLU B 237 OE1 0.071 REMARK 500 GLU B 247 CD GLU B 247 OE1 0.071 REMARK 500 REMARK 500 THIS ENTRY HAS 93 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 2 CB - CG - OD1 ANGL. DEV. = -9.1 DEGREES REMARK 500 LEU A 4 CB - CG - CD2 ANGL. DEV. = -14.0 DEGREES REMARK 500 ILE A 6 CG1 - CB - CG2 ANGL. DEV. = -15.1 DEGREES REMARK 500 MET A 11 CA - CB - CG ANGL. DEV. = -15.5 DEGREES REMARK 500 LEU A 24 CB - CA - C ANGL. DEV. = -11.7 DEGREES REMARK 500 ILE A 29 CG1 - CB - CG2 ANGL. DEV. = -15.2 DEGREES REMARK 500 TYR A 53 CD1 - CE1 - CZ ANGL. DEV. = -6.0 DEGREES REMARK 500 LEU A 95 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 LYS A 98 CD - CE - NZ ANGL. DEV. = -17.5 DEGREES REMARK 500 HIS A 105 C - N - CA ANGL. DEV. = -17.4 DEGREES REMARK 500 ARG A 118 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 121 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 147 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 VAL A 176 CG1 - CB - CG2 ANGL. DEV. = -12.1 DEGREES REMARK 500 ASP A 186 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 186 CB - CG - OD2 ANGL. DEV. = 8.5 DEGREES REMARK 500 ILE A 211 CB - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 ASP A 212 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 220 CB - CG - OD1 ANGL. DEV. = -8.2 DEGREES REMARK 500 ASP A 220 CB - CG - OD2 ANGL. DEV. = 8.9 DEGREES REMARK 500 LEU A 223 CB - CG - CD2 ANGL. DEV. = 11.2 DEGREES REMARK 500 ASP A 226 CB - CG - OD1 ANGL. DEV. = -7.0 DEGREES REMARK 500 ALA A 267 O - C - N ANGL. DEV. = -10.4 DEGREES REMARK 500 LEU B 4 CB - CG - CD1 ANGL. DEV. = -10.5 DEGREES REMARK 500 ILE B 6 CG1 - CB - CG2 ANGL. DEV. = -17.8 DEGREES REMARK 500 ILE B 29 CG1 - CB - CG2 ANGL. DEV. = -21.2 DEGREES REMARK 500 VAL B 51 CG1 - CB - CG2 ANGL. DEV. = 9.9 DEGREES REMARK 500 LYS B 98 CD - CE - NZ ANGL. DEV. = -14.1 DEGREES REMARK 500 HIS B 105 C - N - CA ANGL. DEV. = -15.1 DEGREES REMARK 500 ASP B 109 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 121 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 VAL B 176 CG1 - CB - CG2 ANGL. DEV. = -12.8 DEGREES REMARK 500 ASP B 186 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG B 209 NE - CZ - NH1 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG B 209 NE - CZ - NH2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 220 N - CA - CB ANGL. DEV. = -14.0 DEGREES REMARK 500 LEU B 223 CB - CG - CD2 ANGL. DEV. = 12.7 DEGREES REMARK 500 ARG B 238 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 LEU B 245 CB - CG - CD1 ANGL. DEV. = 10.3 DEGREES REMARK 500 ILE B 256 CA - CB - CG1 ANGL. DEV. = -13.1 DEGREES REMARK 500 ALA B 267 O - C - N ANGL. DEV. = -13.6 DEGREES REMARK 500 ILE C 6 CG1 - CB - CG2 ANGL. DEV. = -13.3 DEGREES REMARK 500 PRO C 19 C - N - CA ANGL. DEV. = -9.1 DEGREES REMARK 500 LYS C 22 CD - CE - NZ ANGL. DEV. = -18.4 DEGREES REMARK 500 LEU C 47 CB - CG - CD2 ANGL. DEV. = -10.4 DEGREES REMARK 500 TYR C 53 CB - CA - C ANGL. DEV. = -15.6 DEGREES REMARK 500 THR C 61 CA - CB - CG2 ANGL. DEV. = -8.9 DEGREES REMARK 500 LYS C 94 CD - CE - NZ ANGL. DEV. = -18.8 DEGREES REMARK 500 LEU C 95 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 PRO C 103 C - N - CA ANGL. DEV. = -9.5 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 70 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 105 53.89 -114.43 REMARK 500 ASN A 129 26.96 -155.65 REMARK 500 GLU A 219 -137.99 43.47 REMARK 500 ALA A 236 5.19 -68.48 REMARK 500 ALA A 249 64.36 -157.42 REMARK 500 TYR B 36 155.60 177.63 REMARK 500 ASP B 109 -60.94 -95.77 REMARK 500 SER B 170 154.56 -27.82 REMARK 500 GLU B 219 -132.07 45.56 REMARK 500 ALA B 249 60.61 -156.73 REMARK 500 ALA C 102 127.12 -33.12 REMARK 500 HIS C 105 51.15 -117.06 REMARK 500 ASN C 129 55.33 -142.99 REMARK 500 MET C 130 129.24 -177.85 REMARK 500 LYS C 133 -71.56 -39.00 REMARK 500 GLN C 134 -70.84 -16.91 REMARK 500 ARG C 147 -2.61 -53.21 REMARK 500 GLU C 195 -56.94 -25.96 REMARK 500 GLU C 197 24.21 -70.61 REMARK 500 ASP C 212 103.77 -161.77 REMARK 500 LEU C 216 -64.00 -96.95 REMARK 500 GLU C 219 -136.88 44.61 REMARK 500 ALA C 249 70.89 -157.40 REMARK 500 ASP C 266 -28.98 -26.39 REMARK 500 ASN D 129 46.29 -144.76 REMARK 500 MET D 130 132.37 -170.25 REMARK 500 ARG D 147 8.19 -66.85 REMARK 500 ARG D 200 -119.84 -138.98 REMARK 500 ARG D 209 -73.97 -117.10 REMARK 500 LEU D 210 -73.07 135.17 REMARK 500 GLU D 219 -141.38 52.27 REMARK 500 TYR D 224 87.78 -158.94 REMARK 500 ALA D 236 0.77 -65.71 REMARK 500 ALA D 249 67.88 -152.71 REMARK 500 ALA D 267 69.91 170.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 266 ALA B 267 146.15 REMARK 500 LEU D 223 TYR D 224 147.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 999 REMARK 999 SEQUENCE REMARK 999 GENBANK SEQUENCE DIFFERS FROM THAT REPORTED BY LOPEZ ET AL REMARK 999 (1990) J BACT 172 4766 BY TWO MUTATIONS- V29I AND F86S. REMARK 999 USED THE ORIGINAL SEQUENCE FOR THE STRUCTURE. DBREF 2CG8 A 1 270 UNP P59657 SULD_STRR6 1 270 DBREF 2CG8 B 1 270 UNP P59657 SULD_STRR6 1 270 DBREF 2CG8 C 1 270 UNP P59657 SULD_STRR6 1 270 DBREF 2CG8 D 1 270 UNP P59657 SULD_STRR6 1 270 SEQRES 1 A 270 MET ASP GLN LEU GLN ILE LYS ASP LEU GLU MET PHE ALA SEQRES 2 A 270 TYR HIS GLY LEU PHE PRO SER GLU LYS GLU LEU GLY GLN SEQRES 3 A 270 LYS PHE ILE VAL SER ALA ILE LEU SER TYR ASP MET THR SEQRES 4 A 270 LYS ALA ALA THR ASP LEU ASP LEU THR ALA SER VAL HIS SEQRES 5 A 270 TYR GLY GLU LEU CYS GLN GLN TRP THR THR TRP PHE GLN SEQRES 6 A 270 GLU THR SER GLU ASP LEU ILE GLU THR VAL ALA TYR LYS SEQRES 7 A 270 LEU VAL GLU ARG THR PHE GLU SER TYR PRO LEU VAL GLN SEQRES 8 A 270 GLU MET LYS LEU GLU LEU LYS LYS PRO TRP ALA PRO VAL SEQRES 9 A 270 HIS LEU SER LEU ASP THR CYS SER VAL THR ILE HIS ARG SEQRES 10 A 270 ARG LYS GLN ARG ALA PHE ILE ALA LEU GLY SER ASN MET SEQRES 11 A 270 GLY ASP LYS GLN ALA ASN LEU LYS GLN ALA ILE ASP LYS SEQRES 12 A 270 LEU ARG ALA ARG GLY ILE HIS ILE LEU LYS GLU SER SER SEQRES 13 A 270 VAL LEU ALA THR GLU PRO TRP GLY GLY VAL GLU GLN ASP SEQRES 14 A 270 SER PHE ALA ASN GLN VAL VAL GLU VAL GLU THR TRP LEU SEQRES 15 A 270 PRO ALA GLN ASP LEU LEU GLU THR LEU LEU ALA ILE GLU SEQRES 16 A 270 SER GLU LEU GLY ARG VAL ARG GLU VAL HIS TRP GLY PRO SEQRES 17 A 270 ARG LEU ILE ASP LEU ASP LEU LEU PHE VAL GLU ASP GLN SEQRES 18 A 270 ILE LEU TYR THR ASP ASP LEU ILE LEU PRO HIS PRO TYR SEQRES 19 A 270 ILE ALA GLU ARG LEU PHE VAL LEU GLU SER LEU GLN GLU SEQRES 20 A 270 ILE ALA PRO HIS PHE ILE HIS PRO ILE LEU LYS GLN PRO SEQRES 21 A 270 ILE ARG ASN LEU TYR ASP ALA LEU LYS LYS SEQRES 1 B 270 MET ASP GLN LEU GLN ILE LYS ASP LEU GLU MET PHE ALA SEQRES 2 B 270 TYR HIS GLY LEU PHE PRO SER GLU LYS GLU LEU GLY GLN SEQRES 3 B 270 LYS PHE ILE VAL SER ALA ILE LEU SER TYR ASP MET THR SEQRES 4 B 270 LYS ALA ALA THR ASP LEU ASP LEU THR ALA SER VAL HIS SEQRES 5 B 270 TYR GLY GLU LEU CYS GLN GLN TRP THR THR TRP PHE GLN SEQRES 6 B 270 GLU THR SER GLU ASP LEU ILE GLU THR VAL ALA TYR LYS SEQRES 7 B 270 LEU VAL GLU ARG THR PHE GLU SER TYR PRO LEU VAL GLN SEQRES 8 B 270 GLU MET LYS LEU GLU LEU LYS LYS PRO TRP ALA PRO VAL SEQRES 9 B 270 HIS LEU SER LEU ASP THR CYS SER VAL THR ILE HIS ARG SEQRES 10 B 270 ARG LYS GLN ARG ALA PHE ILE ALA LEU GLY SER ASN MET SEQRES 11 B 270 GLY ASP LYS GLN ALA ASN LEU LYS GLN ALA ILE ASP LYS SEQRES 12 B 270 LEU ARG ALA ARG GLY ILE HIS ILE LEU LYS GLU SER SER SEQRES 13 B 270 VAL LEU ALA THR GLU PRO TRP GLY GLY VAL GLU GLN ASP SEQRES 14 B 270 SER PHE ALA ASN GLN VAL VAL GLU VAL GLU THR TRP LEU SEQRES 15 B 270 PRO ALA GLN ASP LEU LEU GLU THR LEU LEU ALA ILE GLU SEQRES 16 B 270 SER GLU LEU GLY ARG VAL ARG GLU VAL HIS TRP GLY PRO SEQRES 17 B 270 ARG LEU ILE ASP LEU ASP LEU LEU PHE VAL GLU ASP GLN SEQRES 18 B 270 ILE LEU TYR THR ASP ASP LEU ILE LEU PRO HIS PRO TYR SEQRES 19 B 270 ILE ALA GLU ARG LEU PHE VAL LEU GLU SER LEU GLN GLU SEQRES 20 B 270 ILE ALA PRO HIS PHE ILE HIS PRO ILE LEU LYS GLN PRO SEQRES 21 B 270 ILE ARG ASN LEU TYR ASP ALA LEU LYS LYS SEQRES 1 C 270 MET ASP GLN LEU GLN ILE LYS ASP LEU GLU MET PHE ALA SEQRES 2 C 270 TYR HIS GLY LEU PHE PRO SER GLU LYS GLU LEU GLY GLN SEQRES 3 C 270 LYS PHE ILE VAL SER ALA ILE LEU SER TYR ASP MET THR SEQRES 4 C 270 LYS ALA ALA THR ASP LEU ASP LEU THR ALA SER VAL HIS SEQRES 5 C 270 TYR GLY GLU LEU CYS GLN GLN TRP THR THR TRP PHE GLN SEQRES 6 C 270 GLU THR SER GLU ASP LEU ILE GLU THR VAL ALA TYR LYS SEQRES 7 C 270 LEU VAL GLU ARG THR PHE GLU SER TYR PRO LEU VAL GLN SEQRES 8 C 270 GLU MET LYS LEU GLU LEU LYS LYS PRO TRP ALA PRO VAL SEQRES 9 C 270 HIS LEU SER LEU ASP THR CYS SER VAL THR ILE HIS ARG SEQRES 10 C 270 ARG LYS GLN ARG ALA PHE ILE ALA LEU GLY SER ASN MET SEQRES 11 C 270 GLY ASP LYS GLN ALA ASN LEU LYS GLN ALA ILE ASP LYS SEQRES 12 C 270 LEU ARG ALA ARG GLY ILE HIS ILE LEU LYS GLU SER SER SEQRES 13 C 270 VAL LEU ALA THR GLU PRO TRP GLY GLY VAL GLU GLN ASP SEQRES 14 C 270 SER PHE ALA ASN GLN VAL VAL GLU VAL GLU THR TRP LEU SEQRES 15 C 270 PRO ALA GLN ASP LEU LEU GLU THR LEU LEU ALA ILE GLU SEQRES 16 C 270 SER GLU LEU GLY ARG VAL ARG GLU VAL HIS TRP GLY PRO SEQRES 17 C 270 ARG LEU ILE ASP LEU ASP LEU LEU PHE VAL GLU ASP GLN SEQRES 18 C 270 ILE LEU TYR THR ASP ASP LEU ILE LEU PRO HIS PRO TYR SEQRES 19 C 270 ILE ALA GLU ARG LEU PHE VAL LEU GLU SER LEU GLN GLU SEQRES 20 C 270 ILE ALA PRO HIS PHE ILE HIS PRO ILE LEU LYS GLN PRO SEQRES 21 C 270 ILE ARG ASN LEU TYR ASP ALA LEU LYS LYS SEQRES 1 D 270 MET ASP GLN LEU GLN ILE LYS ASP LEU GLU MET PHE ALA SEQRES 2 D 270 TYR HIS GLY LEU PHE PRO SER GLU LYS GLU LEU GLY GLN SEQRES 3 D 270 LYS PHE ILE VAL SER ALA ILE LEU SER TYR ASP MET THR SEQRES 4 D 270 LYS ALA ALA THR ASP LEU ASP LEU THR ALA SER VAL HIS SEQRES 5 D 270 TYR GLY GLU LEU CYS GLN GLN TRP THR THR TRP PHE GLN SEQRES 6 D 270 GLU THR SER GLU ASP LEU ILE GLU THR VAL ALA TYR LYS SEQRES 7 D 270 LEU VAL GLU ARG THR PHE GLU SER TYR PRO LEU VAL GLN SEQRES 8 D 270 GLU MET LYS LEU GLU LEU LYS LYS PRO TRP ALA PRO VAL SEQRES 9 D 270 HIS LEU SER LEU ASP THR CYS SER VAL THR ILE HIS ARG SEQRES 10 D 270 ARG LYS GLN ARG ALA PHE ILE ALA LEU GLY SER ASN MET SEQRES 11 D 270 GLY ASP LYS GLN ALA ASN LEU LYS GLN ALA ILE ASP LYS SEQRES 12 D 270 LEU ARG ALA ARG GLY ILE HIS ILE LEU LYS GLU SER SER SEQRES 13 D 270 VAL LEU ALA THR GLU PRO TRP GLY GLY VAL GLU GLN ASP SEQRES 14 D 270 SER PHE ALA ASN GLN VAL VAL GLU VAL GLU THR TRP LEU SEQRES 15 D 270 PRO ALA GLN ASP LEU LEU GLU THR LEU LEU ALA ILE GLU SEQRES 16 D 270 SER GLU LEU GLY ARG VAL ARG GLU VAL HIS TRP GLY PRO SEQRES 17 D 270 ARG LEU ILE ASP LEU ASP LEU LEU PHE VAL GLU ASP GLN SEQRES 18 D 270 ILE LEU TYR THR ASP ASP LEU ILE LEU PRO HIS PRO TYR SEQRES 19 D 270 ILE ALA GLU ARG LEU PHE VAL LEU GLU SER LEU GLN GLU SEQRES 20 D 270 ILE ALA PRO HIS PHE ILE HIS PRO ILE LEU LYS GLN PRO SEQRES 21 D 270 ILE ARG ASN LEU TYR ASP ALA LEU LYS LYS HELIX 1 1 PHE A 18 GLY A 25 1 8 HELIX 2 2 MET A 38 THR A 43 1 6 HELIX 3 3 HIS A 52 GLU A 66 1 15 HELIX 4 4 LEU A 71 TYR A 87 1 17 HELIX 5 5 ASP A 132 ARG A 147 1 16 HELIX 6 6 PRO A 183 LEU A 198 1 16 HELIX 7 7 TYR A 234 GLU A 237 5 4 HELIX 8 8 ARG A 238 ALA A 249 1 12 HELIX 9 9 PRO A 260 ASP A 266 1 7 HELIX 10 10 PHE B 18 GLY B 25 1 8 HELIX 11 11 MET B 38 ASP B 44 1 7 HELIX 12 12 HIS B 52 GLU B 66 1 15 HELIX 13 13 LEU B 71 TYR B 87 1 17 HELIX 14 14 ASP B 132 ARG B 147 1 16 HELIX 15 15 PRO B 183 LEU B 198 1 16 HELIX 16 16 TYR B 234 GLU B 237 5 4 HELIX 17 17 ARG B 238 ALA B 249 1 12 HELIX 18 18 PRO B 260 ALA B 267 1 8 HELIX 19 19 PHE C 18 GLY C 25 1 8 HELIX 20 20 MET C 38 LEU C 45 1 8 HELIX 21 21 ASP C 46 SER C 50 5 5 HELIX 22 22 HIS C 52 GLU C 66 1 15 HELIX 23 23 LEU C 71 TYR C 87 1 17 HELIX 24 24 ASP C 132 ARG C 147 1 16 HELIX 25 25 PRO C 183 GLU C 197 1 15 HELIX 26 26 TYR C 234 GLU C 237 5 4 HELIX 27 27 ARG C 238 ALA C 249 1 12 HELIX 28 28 PRO C 260 ALA C 267 1 8 HELIX 29 29 PHE D 18 GLY D 25 1 8 HELIX 30 30 MET D 38 ASP D 44 1 7 HELIX 31 31 HIS D 52 GLU D 66 1 15 HELIX 32 32 LEU D 71 TYR D 87 1 17 HELIX 33 33 ASP D 132 ARG D 147 1 16 HELIX 34 34 PRO D 183 LEU D 198 1 16 HELIX 35 35 TYR D 234 GLU D 237 5 4 HELIX 36 36 ARG D 238 ALA D 249 1 12 HELIX 37 37 PRO D 260 ASP D 266 1 7 SHEET 1 AA 8 CYS A 111 ARG A 118 0 SHEET 2 AA 8 GLU A 92 LYS A 99 -1 O MET A 93 N ARG A 117 SHEET 3 AA 8 GLN A 26 TYR A 36 -1 O ILE A 29 N LYS A 98 SHEET 4 AA 8 ASP A 2 ALA A 13 -1 O ASP A 2 N TYR A 36 SHEET 5 AA 8 THR B 110 ARG B 118 -1 O THR B 110 N LYS A 7 SHEET 6 AA 8 GLU B 92 LYS B 98 -1 O MET B 93 N ARG B 117 SHEET 7 AA 8 GLN B 26 TYR B 36 -1 O ILE B 29 N LYS B 98 SHEET 8 AA 8 ASP B 2 ALA B 13 -1 O ASP B 2 N TYR B 36 SHEET 1 AB 4 HIS A 150 GLU A 154 0 SHEET 2 AB 4 ALA A 172 THR A 180 -1 O GLU A 177 N LEU A 152 SHEET 3 AB 4 GLN A 120 SER A 128 -1 O GLN A 120 N THR A 180 SHEET 4 AB 4 ASP A 212 VAL A 218 -1 O ASP A 212 N GLY A 127 SHEET 1 BA 4 HIS B 150 GLU B 154 0 SHEET 2 BA 4 ALA B 172 THR B 180 -1 O GLU B 177 N LEU B 152 SHEET 3 BA 4 GLN B 120 SER B 128 -1 O GLN B 120 N THR B 180 SHEET 4 BA 4 ASP B 212 VAL B 218 -1 O ASP B 212 N GLY B 127 SHEET 1 BB 3 HIS B 150 GLU B 154 0 SHEET 2 BB 3 ALA B 172 THR B 180 -1 O GLU B 177 N LEU B 152 SHEET 3 BB 3 LEU B 158 ALA B 159 -1 O LEU B 158 N ASN B 173 SHEET 1 CA 8 SER C 112 ARG C 118 0 SHEET 2 CA 8 GLU C 92 LYS C 98 -1 O MET C 93 N ARG C 117 SHEET 3 CA 8 GLN C 26 TYR C 36 -1 O ILE C 29 N LYS C 98 SHEET 4 CA 8 ASP C 2 ALA C 13 -1 O ASP C 2 N TYR C 36 SHEET 5 CA 8 THR D 110 ARG D 118 -1 O THR D 110 N LYS C 7 SHEET 6 CA 8 GLU D 92 LYS D 98 -1 O MET D 93 N ARG D 117 SHEET 7 CA 8 GLN D 26 TYR D 36 -1 O ILE D 29 N LYS D 98 SHEET 8 CA 8 ASP D 2 ALA D 13 -1 O ASP D 2 N TYR D 36 SHEET 1 CB 4 HIS C 150 GLU C 154 0 SHEET 2 CB 4 ALA C 172 THR C 180 -1 O GLU C 177 N LEU C 152 SHEET 3 CB 4 GLN C 120 SER C 128 -1 O GLN C 120 N THR C 180 SHEET 4 CB 4 ASP C 212 VAL C 218 -1 O ASP C 212 N GLY C 127 SHEET 1 DA 4 HIS D 150 GLU D 154 0 SHEET 2 DA 4 ALA D 172 THR D 180 -1 O GLU D 177 N LEU D 152 SHEET 3 DA 4 GLN D 120 SER D 128 -1 O GLN D 120 N THR D 180 SHEET 4 DA 4 ASP D 212 VAL D 218 -1 O ASP D 212 N GLY D 127 CISPEP 1 LEU A 230 PRO A 231 0 -7.49 CISPEP 2 LEU B 230 PRO B 231 0 -5.65 CISPEP 3 LEU C 230 PRO C 231 0 -8.11 CISPEP 4 LEU D 230 PRO D 231 0 -5.82 CRYST1 149.440 149.440 238.740 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006692 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006692 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004189 0.00000 MTRIX1 1 0.493400 0.510000 0.704600 0.37550 1 MTRIX2 1 0.504400 0.492200 -0.709500 -0.40200 1 MTRIX3 1 -0.708600 0.705400 -0.014430 -0.05502 1 MTRIX1 2 -0.282200 -0.723200 -0.630400 -57.07000 1 MTRIX2 2 -0.713900 -0.280600 0.641600 -56.57000 1 MTRIX3 2 -0.640900 0.631100 -0.437100 -0.24050 1 MTRIX1 3 -0.950100 -0.059560 -0.306100 -57.26000 1 MTRIX2 3 -0.044160 -0.946000 0.321100 -56.38000 1 MTRIX3 3 -0.308700 0.318600 0.896200 0.50920 1