HEADER HYDROLASE 02-MAR-06 2CGG OBSLTE 01-JUL-08 2CGG 2VJ1 TITLE CRYSTAL STRUCTURE OF ACYLATED SARS CORONAVIRUS MAIN TITLE 2 PROTEINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C-LIKE PROTEINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SARS COV MAIN PROTEINASE, 3CL-PRO; COMPND 5 EC: 3.4.24.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN SARS CORONAVIRUS; SOURCE 3 EXPRESSION_SYSTEM: ESCHERICHIA COLI KEYWDS SARS, MAIN PROTEINASE, HYDROLASE, POLYPROTEIN, PROTEASE, KEYWDS 2 RIBOSOMAL FRAMESHIFT, THIOL PROTEASE EXPDTA X-RAY DIFFRACTION AUTHOR K.PUMPOR,K.H.G.VERSCHUEREN,R.HILGENFELD REVDAT 2 01-JUL-08 2CGG 1 OBSLTE REVDAT 1 03-JUL-07 2CGG 0 JRNL AUTH K.PUMPOR,K.H.G.VERSCHUEREN,R.HILGENFELD JRNL TITL CRYSTAL STRUCTURE OF ACYLATED SARS CORONAVIRUS JRNL TITL 2 MAIN PROTEINASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1756 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH : NULL REMARK 3 BIN RESOLUTION RANGE LOW : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : 2388 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.4030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 5027 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.46000 REMARK 3 B22 (A**2) : 0.81000 REMARK 3 B33 (A**2) : -1.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.242 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.144 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4836 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6575 ; 1.588 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 613 ; 7.284 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 219 ;35.147 ;24.292 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 787 ;18.223 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;18.553 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 742 ; 0.266 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3697 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2241 ; 0.236 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3260 ; 0.324 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 450 ; 0.253 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 52 ; 0.274 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.234 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3065 ; 1.869 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4872 ; 2.796 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1984 ; 4.559 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1697 ; 6.026 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 0 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 7 REMARK 3 ORIGIN FOR THE GROUP (A): -14.9876 -7.5950 24.2082 REMARK 3 T TENSOR REMARK 3 T11: 0.0165 T22: -0.1305 REMARK 3 T33: 0.4045 T12: 0.0483 REMARK 3 T13: 0.1283 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 30.5959 L22: 17.0203 REMARK 3 L33: 10.3651 L12: 18.5426 REMARK 3 L13: -11.2948 L23: -12.8307 REMARK 3 S TENSOR REMARK 3 S11: -0.4925 S12: 0.2399 S13: -3.3052 REMARK 3 S21: -0.5732 S22: -0.6304 S23: -1.3394 REMARK 3 S31: 0.3455 S32: -0.5863 S33: 1.1229 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7714 23.5113 17.4577 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: -0.1701 REMARK 3 T33: 0.0178 T12: -0.0066 REMARK 3 T13: 0.1050 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 1.9908 L22: 3.3659 REMARK 3 L33: 2.7714 L12: -0.2839 REMARK 3 L13: -1.4992 L23: 1.0900 REMARK 3 S TENSOR REMARK 3 S11: 0.3524 S12: 0.1308 S13: 0.3630 REMARK 3 S21: -0.7929 S22: -0.0318 S23: -0.3033 REMARK 3 S31: -0.7988 S32: -0.0473 S33: -0.3206 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2879 7.1862 17.2176 REMARK 3 T TENSOR REMARK 3 T11: -0.0492 T22: -0.1292 REMARK 3 T33: -0.0676 T12: -0.0246 REMARK 3 T13: -0.0075 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.7945 L22: 3.6488 REMARK 3 L33: 2.3152 L12: -0.9454 REMARK 3 L13: -0.8996 L23: 1.3327 REMARK 3 S TENSOR REMARK 3 S11: 0.1202 S12: 0.0726 S13: -0.0332 REMARK 3 S21: -0.3015 S22: -0.0195 S23: -0.0689 REMARK 3 S31: -0.2582 S32: -0.0131 S33: -0.1006 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3511 0.3282 4.1790 REMARK 3 T TENSOR REMARK 3 T11: 0.3343 T22: -0.0996 REMARK 3 T33: -0.0369 T12: -0.0131 REMARK 3 T13: 0.0827 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 2.1500 L22: 21.3178 REMARK 3 L33: 10.3134 L12: 5.1381 REMARK 3 L13: -1.4974 L23: -7.4331 REMARK 3 S TENSOR REMARK 3 S11: -0.2205 S12: 0.1916 S13: 0.1712 REMARK 3 S21: -2.6119 S22: 0.5453 S23: 0.1922 REMARK 3 S31: 0.0728 S32: -0.2506 S33: -0.3248 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 201 A 269 REMARK 3 ORIGIN FOR THE GROUP (A): 1.7083 -19.9508 20.3990 REMARK 3 T TENSOR REMARK 3 T11: -0.0522 T22: -0.1393 REMARK 3 T33: 0.0074 T12: -0.0334 REMARK 3 T13: 0.0172 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.7348 L22: 2.9614 REMARK 3 L33: 3.4091 L12: 1.4241 REMARK 3 L13: -1.9431 L23: -2.6906 REMARK 3 S TENSOR REMARK 3 S11: -0.3903 S12: -0.0398 S13: -0.2472 REMARK 3 S21: -0.3552 S22: 0.0465 S23: -0.2093 REMARK 3 S31: 0.4802 S32: 0.1060 S33: 0.3439 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 270 A 300 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8327 -16.3076 19.5272 REMARK 3 T TENSOR REMARK 3 T11: -0.1611 T22: -0.0751 REMARK 3 T33: -0.0423 T12: -0.0275 REMARK 3 T13: -0.0368 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 4.5714 L22: 6.6297 REMARK 3 L33: 4.4806 L12: 1.9941 REMARK 3 L13: 0.1314 L23: -2.4901 REMARK 3 S TENSOR REMARK 3 S11: -0.1031 S12: 0.3188 S13: 0.1390 REMARK 3 S21: -0.0030 S22: 0.1903 S23: 0.7574 REMARK 3 S31: 0.1833 S32: -0.6464 S33: -0.0872 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 7 REMARK 3 ORIGIN FOR THE GROUP (A): -16.3257 -0.7189 15.2983 REMARK 3 T TENSOR REMARK 3 T11: -0.0694 T22: 0.1659 REMARK 3 T33: -0.0092 T12: -0.0068 REMARK 3 T13: -0.0574 T23: -0.1141 REMARK 3 L TENSOR REMARK 3 L11: 34.6277 L22: 1.6412 REMARK 3 L33: 6.6450 L12: 0.7338 REMARK 3 L13: 12.6620 L23: -1.5416 REMARK 3 S TENSOR REMARK 3 S11: 1.1389 S12: 3.0979 S13: -1.1728 REMARK 3 S21: -0.4756 S22: -0.7440 S23: -1.1794 REMARK 3 S31: -0.7613 S32: -0.2337 S33: -0.3949 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 98 REMARK 3 ORIGIN FOR THE GROUP (A): -28.5004 0.2897 45.8922 REMARK 3 T TENSOR REMARK 3 T11: -0.1160 T22: 0.2794 REMARK 3 T33: -0.1754 T12: -0.0364 REMARK 3 T13: -0.0040 T23: -0.0854 REMARK 3 L TENSOR REMARK 3 L11: 2.9892 L22: 1.8302 REMARK 3 L33: 3.8834 L12: 1.6210 REMARK 3 L13: -1.2024 L23: -1.4627 REMARK 3 S TENSOR REMARK 3 S11: 0.2706 S12: -0.8971 S13: 0.2483 REMARK 3 S21: 0.3489 S22: -0.2229 S23: -0.0101 REMARK 3 S31: -0.4187 S32: -0.3477 S33: -0.0477 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 99 B 188 REMARK 3 ORIGIN FOR THE GROUP (A): -28.0215 -3.7660 29.8549 REMARK 3 T TENSOR REMARK 3 T11: -0.1344 T22: -0.0055 REMARK 3 T33: -0.1092 T12: -0.0272 REMARK 3 T13: -0.0200 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 3.5076 L22: 2.3121 REMARK 3 L33: 3.8710 L12: 1.4754 REMARK 3 L13: 1.4321 L23: -0.4494 REMARK 3 S TENSOR REMARK 3 S11: 0.0811 S12: -0.3084 S13: -0.0568 REMARK 3 S21: 0.0640 S22: -0.0855 S23: -0.0868 REMARK 3 S31: 0.0721 S32: -0.2659 S33: 0.0044 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 189 B 200 REMARK 3 ORIGIN FOR THE GROUP (A): -31.9523 -17.9801 26.1493 REMARK 3 T TENSOR REMARK 3 T11: 0.6684 T22: 0.1885 REMARK 3 T33: 0.1272 T12: -0.0027 REMARK 3 T13: 0.0199 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 4.0929 L22: 1.8520 REMARK 3 L33: 49.0002 L12: 0.3768 REMARK 3 L13: -4.1992 L23: -9.3987 REMARK 3 S TENSOR REMARK 3 S11: -0.2826 S12: -0.4044 S13: -0.5165 REMARK 3 S21: -0.3895 S22: 0.2226 S23: 0.4651 REMARK 3 S31: 3.8799 S32: -0.0603 S33: 0.0601 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 201 B 269 REMARK 3 ORIGIN FOR THE GROUP (A): -31.2759 -7.8427 2.1272 REMARK 3 T TENSOR REMARK 3 T11: -0.1519 T22: 0.1265 REMARK 3 T33: -0.1727 T12: -0.0268 REMARK 3 T13: -0.0249 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 6.2104 L22: 2.7817 REMARK 3 L33: 3.6127 L12: 0.4002 REMARK 3 L13: -1.8922 L23: 0.0268 REMARK 3 S TENSOR REMARK 3 S11: -0.0696 S12: 0.8852 S13: 0.1405 REMARK 3 S21: -0.1074 S22: 0.1782 S23: 0.0621 REMARK 3 S31: -0.0297 S32: -0.1792 S33: -0.1086 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 270 B 300 REMARK 3 ORIGIN FOR THE GROUP (A): -22.4341 -7.7944 7.2770 REMARK 3 T TENSOR REMARK 3 T11: -0.1701 T22: 0.0554 REMARK 3 T33: -0.1303 T12: -0.0484 REMARK 3 T13: -0.0455 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 4.3873 L22: 3.0443 REMARK 3 L33: 5.4904 L12: -0.2158 REMARK 3 L13: -1.2430 L23: 0.1142 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.4182 S13: 0.0042 REMARK 3 S21: 0.1055 S22: 0.0563 S23: -0.4071 REMARK 3 S31: -0.0038 S32: 0.3621 S33: 0.0029 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2CGG COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-06-28) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY EBI. REMARK 100 THE EBI ID CODE IS EBI-28008. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-2005 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8157 REMARK 200 MONOCHROMATOR : TRIANGULAR REMARK 200 OPTICS : BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD (MAR 165MM) REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35026 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 39.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1UJ1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG10000, 0.1M MES PH6.5, 3% REMARK 280 ETHYLENE GLYCOL, 50 MM NH4-ACETATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,1/2+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.88000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, Y, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 302 REMARK 465 VAL A 303 REMARK 465 THR A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 MET B 1 REMARK 465 GLY B 302 REMARK 465 VAL B 303 REMARK 465 THR B 304 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 OE1 GLU B 166 C3 BEZ B 1304 0.87 REMARK 500 OE1 GLU B 166 C4 BEZ B 1304 1.88 REMARK 500 OE1 GLU B 166 C2 BEZ B 1304 2.03 REMARK 500 CD GLU B 166 C3 BEZ B 1304 2.07 REMARK 500 O HOH Z 54 O HOH Z 55 2.08 REMARK 500 O HOH Z 70 O HOH Z 71 2.11 REMARK 500 O HOH Y 115 O HOH Y 116 2.12 REMARK 500 NE2 HIS B 163 OE2 GLU B 166 2.15 REMARK 500 O HOH Z 142 O HOH Z 143 2.19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 60 N ARG A 60 CA 0.094 REMARK 500 ARG A 60 CZ ARG A 60 NH1 0.119 REMARK 500 ILE A 259 CG1 ILE A 259 CD1 -0.107 REMARK 500 LYS B 61 C SER B 62 N 0.116 REMARK 500 ILE B 200 CG1 ILE B 200 CD1 0.103 REMARK 500 LEU B 208 CG LEU B 208 CD2 0.098 REMARK 500 ARG B 222 NE ARG B 222 CZ 0.106 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 289 N - CA - C ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 84 -119.74 61.48 REMARK 500 TYR A 154 -117.69 47.71 REMARK 500 ASN B 84 -117.94 45.31 REMARK 500 TYR B 154 -107.85 61.75 REMARK 525 REMARK 525 SOLVENT REMARK 525 THE FOLLOWING SOLVENT MOLECULES LIE FARTHER THAN EXPECTED REMARK 525 FROM THE PROTEIN OR NUCLEIC ACID MOLECULE AND MAY BE REMARK 525 ASSOCIATED WITH A SYMMETRY RELATED MOLECULE (M=MODEL REMARK 525 NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH Y 36 DISTANCE = 5.70 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 SITE_DESCRIPTION: BEZ BINDING SITE FOR CHAIN B DBREF 2CGG A 1 1 PDB 2CGG 2CGG 1 1 DBREF 2CGG A 2 304 UNP P59641 R1AB_CVHSA 3242 3544 DBREF 2CGG A 305 310 PDB 2CGG 2CGG 305 310 DBREF 2CGG B 1 1 PDB 2CGG 2CGG 1 1 DBREF 2CGG B 2 304 UNP P59641 R1AB_CVHSA 3242 3544 DBREF 2CGG B 305 310 PDB 2CGG 2CGG 305 310 SEQRES 1 A 310 MET GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 A 310 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 A 310 LEU ASN GLY LEU TRP LEU ASP ASP THR VAL TYR CYS PRO SEQRES 4 A 310 ARG HIS VAL ILE CYS THR ALA GLU ASP MET LEU ASN PRO SEQRES 5 A 310 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS SER SEQRES 6 A 310 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 A 310 GLY HIS SER MET GLN ASN CYS LEU LEU ARG LEU LYS VAL SEQRES 8 A 310 ASP THR SER ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 A 310 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 A 310 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 A 310 ARG PRO ASN HIS THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 A 310 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 A 310 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 A 310 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY LYS PHE TYR SEQRES 15 A 310 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 A 310 THR ASP THR THR ILE THR LEU ASN VAL LEU ALA TRP LEU SEQRES 17 A 310 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 A 310 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 A 310 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 A 310 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 A 310 VAL LEU ASP MET CYS ALA ALA LEU LYS GLU LEU LEU GLN SEQRES 22 A 310 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER THR ILE SEQRES 23 A 310 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 A 310 CYS SER GLY VAL THR HIS HIS HIS HIS HIS HIS SEQRES 1 B 310 MET GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 B 310 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 B 310 LEU ASN GLY LEU TRP LEU ASP ASP THR VAL TYR CYS PRO SEQRES 4 B 310 ARG HIS VAL ILE CYS THR ALA GLU ASP MET LEU ASN PRO SEQRES 5 B 310 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS SER SEQRES 6 B 310 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 B 310 GLY HIS SER MET GLN ASN CYS LEU LEU ARG LEU LYS VAL SEQRES 8 B 310 ASP THR SER ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 B 310 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 B 310 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 B 310 ARG PRO ASN HIS THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 B 310 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 B 310 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 B 310 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY LYS PHE TYR SEQRES 15 B 310 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 B 310 THR ASP THR THR ILE THR LEU ASN VAL LEU ALA TRP LEU SEQRES 17 B 310 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 B 310 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 B 310 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 B 310 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 B 310 VAL LEU ASP MET CYS ALA ALA LEU LYS GLU LEU LEU GLN SEQRES 22 B 310 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER THR ILE SEQRES 23 B 310 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 B 310 CYS SER GLY VAL THR HIS HIS HIS HIS HIS HIS HET DMS A1302 4 HET DMS B1302 4 HET DMS B1303 4 HET BEZ B1304 8 HETNAM DMS DIMETHYL SULFOXIDE HETNAM BEZ BENZOIC ACID FORMUL 3 DMS 3(C2 H6 O S) FORMUL 6 BEZ C7 H6 O2 FORMUL 7 HOH *302(H2 O) HELIX 1 1 SER A 10 GLY A 15 1 6 HELIX 2 2 HIS A 41 CYS A 44 5 4 HELIX 3 3 THR A 45 ASN A 51 1 7 HELIX 4 4 ASN A 53 LYS A 61 1 9 HELIX 5 5 SER A 62 HIS A 64 5 3 HELIX 6 6 ILE A 200 ASN A 214 1 15 HELIX 7 7 THR A 226 TYR A 237 1 12 HELIX 8 8 THR A 243 LEU A 250 1 8 HELIX 9 9 LEU A 250 GLY A 258 1 9 HELIX 10 10 ALA A 260 GLY A 275 1 16 HELIX 11 11 THR A 292 GLN A 299 1 8 HELIX 12 12 SER B 10 GLY B 15 1 6 HELIX 13 13 HIS B 41 CYS B 44 5 4 HELIX 14 14 THR B 45 LEU B 50 1 6 HELIX 15 15 ASN B 53 ILE B 59 1 7 HELIX 16 16 SER B 62 PHE B 66 5 5 HELIX 17 17 ILE B 200 ASN B 214 1 15 HELIX 18 18 THR B 226 MET B 235 1 10 HELIX 19 19 LYS B 236 ASN B 238 5 3 HELIX 20 20 THR B 243 LEU B 250 1 8 HELIX 21 21 LEU B 250 GLY B 258 1 9 HELIX 22 22 ALA B 260 GLY B 275 1 16 HELIX 23 23 THR B 292 CYS B 300 1 9 SHEET 1 AA 7 VAL A 73 LEU A 75 0 SHEET 2 AA 7 PHE A 66 ALA A 70 -1 O VAL A 68 N LEU A 75 SHEET 3 AA 7 MET A 17 CYS A 22 -1 O GLN A 19 N GLN A 69 SHEET 4 AA 7 THR A 25 LEU A 32 -1 O THR A 25 N CYS A 22 SHEET 5 AA 7 THR A 35 PRO A 39 -1 O THR A 35 N LEU A 32 SHEET 6 AA 7 LEU A 86 VAL A 91 -1 O LEU A 87 N CYS A 38 SHEET 7 AA 7 VAL A 77 GLN A 83 -1 N ILE A 78 O LYS A 90 SHEET 1 AB 5 LYS A 100 PHE A 103 0 SHEET 2 AB 5 CYS A 156 GLU A 166 1 O VAL A 157 N LYS A 102 SHEET 3 AB 5 VAL A 148 ASP A 153 -1 O GLY A 149 N CYS A 160 SHEET 4 AB 5 THR A 111 TYR A 118 -1 O SER A 113 N PHE A 150 SHEET 5 AB 5 SER A 121 ALA A 129 -1 O SER A 121 N TYR A 118 SHEET 1 AC 3 LYS A 100 PHE A 103 0 SHEET 2 AC 3 CYS A 156 GLU A 166 1 O VAL A 157 N LYS A 102 SHEET 3 AC 3 HIS A 172 THR A 175 -1 O ALA A 173 N MET A 165 SHEET 1 BA 7 VAL B 73 LEU B 75 0 SHEET 2 BA 7 LEU B 67 ALA B 70 -1 O VAL B 68 N LEU B 75 SHEET 3 BA 7 MET B 17 CYS B 22 -1 O GLN B 19 N GLN B 69 SHEET 4 BA 7 THR B 25 LEU B 32 -1 O THR B 25 N CYS B 22 SHEET 5 BA 7 THR B 35 PRO B 39 -1 O THR B 35 N LEU B 32 SHEET 6 BA 7 LEU B 86 VAL B 91 -1 O LEU B 87 N CYS B 38 SHEET 7 BA 7 VAL B 77 GLN B 83 -1 N ILE B 78 O LYS B 90 SHEET 1 BB 5 LYS B 100 PHE B 103 0 SHEET 2 BB 5 CYS B 156 GLU B 166 1 O VAL B 157 N LYS B 102 SHEET 3 BB 5 VAL B 148 ASP B 153 -1 O GLY B 149 N CYS B 160 SHEET 4 BB 5 THR B 111 TYR B 118 -1 O SER B 113 N PHE B 150 SHEET 5 BB 5 SER B 121 ALA B 129 -1 O SER B 121 N TYR B 118 SHEET 1 BC 3 LYS B 100 PHE B 103 0 SHEET 2 BC 3 CYS B 156 GLU B 166 1 O VAL B 157 N LYS B 102 SHEET 3 BC 3 HIS B 172 THR B 175 -1 O ALA B 173 N MET B 165 LINK SG CYS B 145 C BEZ B1304 SITE 1 AC1 5 LYS A 5 GLN A 127 LYS B 5 ALA B 7 SITE 2 AC1 5 GLN B 127 SITE 1 AC2 5 PRO A 132 THR A 196 THR A 198 GLN B 244 SITE 2 AC2 5 ASP B 245 SITE 1 AC4 5 ASN B 142 GLY B 143 CYS B 145 HIS B 163 SITE 2 AC4 5 GLU B 166 CRYST1 52.231 97.760 67.709 90.00 103.01 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019146 0.000000 0.004424 0.00000 SCALE2 0.000000 0.010229 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015158 0.00000