HEADER LECTIN 15-MAR-06 2CHH TITLE RALSTONIA SOLANACEARUM HIGH-AFFINITY MANNOSE-BINDING LECTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN RSC3288; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RALSTONIA SOLANACEARUM HIGH-AFFINITY MANNOSE-BINDING LECTIN COMPND 5 RS2L; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SOLANACEARUM; SOURCE 3 ORGANISM_TAXID: 305; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET25B KEYWDS LECTIN, SUGAR-BINDING PROTEIN, D-MANNOSE, PLANT PATHOGEN, KEYWDS 2 HYPOTHETICAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.P.MITCHELL,M.WIMMEROVA,A.IMBERTY REVDAT 7 13-DEC-23 2CHH 1 HETSYN REVDAT 6 29-JUL-20 2CHH 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE REVDAT 5 19-DEC-18 2CHH 1 JRNL LINK ATOM REVDAT 4 27-JUN-18 2CHH 1 LINK REVDAT 3 24-FEB-09 2CHH 1 VERSN REVDAT 2 20-DEC-06 2CHH 1 JRNL REVDAT 1 16-MAR-06 2CHH 0 SPRSDE 16-MAR-06 2CHH 1VYY JRNL AUTH D.SUDAKEVITZ,N.KOSTLANOVA,G.BLATMAN-JAN,E.P.MITCHELL, JRNL AUTH 2 B.LERRER,M.WIMMEROVA,D.J.KATCOFF,A.IMBERTY,N.GILBOA-GARBER JRNL TITL A NEW RALSTONIA SOLANACEARUM HIGH-AFFINITY MANNOSE-BINDING JRNL TITL 2 LECTIN RS-IIL STRUCTURALLY RESEMBLING THE PSEUDOMONAS JRNL TITL 3 AERUGINOSA FUCOSE-SPECIFIC LECTIN PA-IIL. JRNL REF MOL. MICROBIOL. V. 52 691 2004 JRNL REFN ISSN 0950-382X JRNL PMID 15101976 JRNL DOI 10.1111/J.1365-2958.2004.04020.X REMARK 2 REMARK 2 RESOLUTION. 1.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0003 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 69370 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.100 REMARK 3 R VALUE (WORKING SET) : 0.100 REMARK 3 FREE R VALUE : 0.110 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3685 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5011 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 237 REMARK 3 BIN FREE R VALUE : 0.2370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 817 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 5.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 0.46000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.014 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.015 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.009 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.371 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.986 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.984 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 968 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 847 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1341 ; 1.977 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2005 ; 1.919 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 140 ; 6.960 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 38 ;42.138 ;28.158 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 157 ;12.734 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 163 ; 0.370 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1164 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 171 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 182 ; 0.282 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 848 ; 0.191 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 514 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 673 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 141 ; 0.215 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.336 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.269 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.171 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 649 ; 1.602 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1052 ; 2.306 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 344 ; 3.166 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 288 ; 4.125 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. MET 90 IS MODELLED AS TWO CONFORMATIONS. UNK 1 IS AN REMARK 3 UNKNOWN ATOM NEARBY TO MET 90. THE MET 90 CONFORMER B HAS AN REMARK 3 UNUSUALLY SHORT SD-CE BOND LENGTH. THIS COULD BE DUE TO REMARK 3 RADIATION DAMAGE EFFECTS THAT WERE NOT UNDERSTOOD IN THIS REMARK 3 INSTANCE. DATA COLLECTED AT LOWER RESOLUTION WITH A LOWER DOSE REMARK 3 DID NOT SHOW THE SAME DISTORTION. REMARK 4 REMARK 4 2CHH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1290028157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.20 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73738 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 18.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 2.920 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1UQX REMARK 200 REMARK 200 REMARK: MOLECULAR REPLACEMENT WAS USED TO LOCATE THE CALCIUM REMARK 200 POSITIONS AND THEN ACORN TO GENERATE PHASING FOR FULL MODEL REMARK 200 RECONSTRUCTION WITH ARPWARP REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5UL DROPS OF 10MG/ML PROTEIN DISSOLVED REMARK 280 IN WATER MIXED WITH 5UL DROPS OF 8% PEG 10000, 0.1M TRIS HCL, PH REMARK 280 8.2 WITH MANNOSE AT 270UG/ML, PH 8.20 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.64600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.03200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.44650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.64600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.03200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.44650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.64600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 31.03200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 37.44650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.64600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 31.03200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 37.44650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2023 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2181 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 2 O HOH A 2014 1.63 REMARK 500 O HOH A 2196 O HOH A 2197 2.06 REMARK 500 OE1 GLN A 2 O HOH A 2013 2.07 REMARK 500 O HOH A 2047 O HOH A 2088 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 90 SD MET A 90 CE -0.367 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 90 CG - SD - CE ANGL. DEV. = -10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 46 59.70 -117.39 REMARK 500 LYS A 85 -41.96 -155.17 REMARK 500 LYS A 85 -65.47 -134.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1114 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 21 O REMARK 620 2 ASP A 100 OD1 143.9 REMARK 620 3 ASP A 100 OD2 152.3 46.1 REMARK 620 4 ASN A 102 OD1 85.4 69.9 76.5 REMARK 620 5 ASP A 103 OD1 84.7 68.9 114.8 87.8 REMARK 620 6 GLY A 113 O 55.0 97.9 104.5 30.4 86.8 REMARK 620 7 MAN A1117 O2 77.2 130.5 115.2 159.6 101.0 130.8 REMARK 620 8 MAN A1117 O3 132.8 65.1 73.4 134.9 75.7 158.9 65.5 REMARK 620 9 BMA A1118 O2 77.2 130.5 115.2 159.6 101.0 130.8 0.0 65.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1115 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 94 OE1 REMARK 620 2 GLU A 94 OE2 53.9 REMARK 620 3 ASP A 98 OD1 85.5 83.3 REMARK 620 4 ASP A 100 OD1 77.9 130.9 84.3 REMARK 620 5 ASP A 103 OD1 117.8 131.5 144.7 76.2 REMARK 620 6 ASP A 103 OD2 83.7 80.7 163.9 105.1 51.4 REMARK 620 7 MAN A1117 O3 149.4 144.2 76.1 76.2 70.9 118.5 REMARK 620 8 MAN A1117 O4 141.3 87.8 96.5 140.8 81.5 84.5 66.2 REMARK 620 9 BMA A1118 O3 149.4 144.2 76.1 76.2 70.9 118.5 0.0 66.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UQX RELATED DB: PDB REMARK 900 RALSTONIA SOLANACEARUM LECTIN (RS-IIL) IN COMPLEX WITH ALPHA- REMARK 900 METHYLMANNOSIDE DBREF 2CHH A 0 113 UNP Q8XUA5 Q8XUA5_RALSO 1 114 SEQRES 1 A 114 MET ALA GLN GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 A 114 SER PHE GLY VAL THR ALA PHE ALA ASN ALA ALA ASN THR SEQRES 3 A 114 GLN THR ILE GLN VAL LEU VAL ASP ASN VAL VAL LYS ALA SEQRES 4 A 114 THR PHE THR GLY SER GLY THR SER ASP LYS LEU LEU GLY SEQRES 5 A 114 SER GLN VAL LEU ASN SER GLY SER GLY ALA ILE LYS ILE SEQRES 6 A 114 GLN VAL SER VAL ASN GLY LYS PRO SER ASP LEU VAL SER SEQRES 7 A 114 ASN GLN THR ILE LEU ALA ASN LYS LEU ASN PHE ALA MET SEQRES 8 A 114 VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN ASP SEQRES 9 A 114 GLY ILE ALA VAL LEU ASN TRP PRO LEU GLY HET CA A1114 1 HET CA A1115 1 HET UNX A1116 1 HET MAN A1117 12 HET BMA A1118 12 HETNAM CA CALCIUM ION HETNAM UNX UNKNOWN ATOM OR ION HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 CA 2(CA 2+) FORMUL 4 UNX X FORMUL 5 MAN C6 H12 O6 FORMUL 6 BMA C6 H12 O6 FORMUL 7 HOH *220(H2 O) SHEET 1 AA 4 GLY A 4 LEU A 8 0 SHEET 2 AA 4 ALA A 61 SER A 67 -1 O ILE A 62 N PHE A 6 SHEET 3 AA 4 THR A 25 VAL A 32 -1 O THR A 27 N SER A 67 SHEET 4 AA 4 VAL A 36 SER A 43 -1 O ALA A 38 N VAL A 30 SHEET 1 AB 5 ASP A 47 LEU A 55 0 SHEET 2 AB 5 SER A 13 ASN A 21 -1 O VAL A 16 N GLN A 53 SHEET 3 AB 5 ASP A 103 TRP A 110 -1 O VAL A 107 N THR A 17 SHEET 4 AB 5 LEU A 86 GLU A 94 -1 O VAL A 91 N ALA A 106 SHEET 5 AB 5 ASP A 74 LEU A 82 -1 O ASN A 78 N MET A 90 LINK O ASN A 21 CA CA A1114 1555 1555 2.34 LINK OE1 GLU A 94 CA CA A1115 1555 1555 2.46 LINK OE2 GLU A 94 CA CA A1115 1555 1555 2.40 LINK OD1 ASP A 98 CA CA A1115 1555 1555 2.33 LINK OD1 ASP A 100 CA CA A1114 1555 1555 3.02 LINK OD2 ASP A 100 CA CA A1114 1555 1555 2.42 LINK OD1 ASP A 100 CA CA A1115 1555 1555 2.37 LINK OD1 ASN A 102 CA CA A1114 1555 1555 2.35 LINK OD1 ASP A 103 CA CA A1114 1555 1555 2.34 LINK OD1 ASP A 103 CA CA A1115 1555 1555 2.62 LINK OD2 ASP A 103 CA CA A1115 1555 1555 2.40 LINK O GLY A 113 CA CA A1114 1555 3555 2.39 LINK CA CA A1114 O2 AMAN A1117 1555 1555 2.50 LINK CA CA A1114 O3 AMAN A1117 1555 1555 2.49 LINK CA CA A1114 O2 BBMA A1118 1555 1555 2.50 LINK CA CA A1114 O3 BBMA A1118 1555 1555 2.49 LINK CA CA A1115 O3 AMAN A1117 1555 1555 2.49 LINK CA CA A1115 O4 AMAN A1117 1555 1555 2.57 LINK CA CA A1115 O3 BBMA A1118 1555 1555 2.49 LINK CA CA A1115 O4 BBMA A1118 1555 1555 2.57 CISPEP 1 TRP A 110 PRO A 111 0 -12.44 CRYST1 59.292 62.064 74.893 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016866 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013352 0.00000