HEADER INHIBITOR 29-MAR-06 2CJ8 TITLE CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO (PH TITLE 2 9.5) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INVERTASE INHIBITOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 TISSUE: CELL WALL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI DE3; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM20 KEYWDS INHIBITOR, PROTEIN BINDING, FOUR-HELIX BUNDLE, HELICAL HAIRPIN EXPDTA X-RAY DIFFRACTION AUTHOR M.HOTHORN,K.SCHEFFZEK REVDAT 7 20-NOV-24 2CJ8 1 REMARK REVDAT 6 13-DEC-23 2CJ8 1 REMARK REVDAT 5 24-JUL-19 2CJ8 1 REMARK REVDAT 4 13-JUL-11 2CJ8 1 VERSN REVDAT 3 24-FEB-09 2CJ8 1 VERSN REVDAT 2 17-MAY-06 2CJ8 1 JRNL REVDAT 1 03-APR-06 2CJ8 0 JRNL AUTH M.HOTHORN,K.SCHEFFZEK JRNL TITL MULTIPLE CRYSTAL FORMS OF THE CELL-WALL INVERTASE INHIBITOR JRNL TITL 2 FROM TOBACCO SUPPORT HIGH CONFORMATIONAL RIGIDITY OVER A JRNL TITL 3 BROAD PH-RANGE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 62 665 2006 JRNL REFN ISSN 0907-4449 JRNL PMID 16699194 JRNL DOI 10.1107/S0907444906011693 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 10602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 558 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 740 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2134 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.17000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -1.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.536 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.221 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.218 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.859 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2177 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2014 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2963 ; 1.542 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4710 ; 0.917 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 292 ; 7.015 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;38.058 ;25.789 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;18.177 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.784 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 358 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2424 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 377 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 589 ; 0.247 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1976 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1081 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1274 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 65 ; 0.230 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.152 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.204 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.245 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1471 ; 0.627 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 593 ; 0.133 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2329 ; 1.065 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 761 ; 1.707 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 633 ; 2.611 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): -12.7140 2.0880 -8.9660 REMARK 3 T TENSOR REMARK 3 T11: -0.1992 T22: -0.2286 REMARK 3 T33: -0.2826 T12: -0.0077 REMARK 3 T13: 0.0265 T23: -0.0457 REMARK 3 L TENSOR REMARK 3 L11: 2.3445 L22: 6.5479 REMARK 3 L33: 3.6771 L12: -0.7750 REMARK 3 L13: 0.4987 L23: -1.4219 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: -0.1547 S13: 0.1569 REMARK 3 S21: 0.3695 S22: 0.0281 S23: 0.3078 REMARK 3 S31: -0.5962 S32: -0.1268 S33: -0.0435 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 149 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2970 -10.9670 -27.2920 REMARK 3 T TENSOR REMARK 3 T11: -0.2244 T22: -0.1329 REMARK 3 T33: -0.2104 T12: 0.0448 REMARK 3 T13: 0.0617 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.5997 L22: 1.8532 REMARK 3 L33: 5.5217 L12: -0.5671 REMARK 3 L13: 1.7592 L23: 0.1172 REMARK 3 S TENSOR REMARK 3 S11: 0.1180 S12: 0.2405 S13: 0.1030 REMARK 3 S21: -0.2929 S22: -0.1213 S23: 0.0311 REMARK 3 S31: -0.1783 S32: -0.3158 S33: 0.0033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2CJ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1290028346. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 9.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11192 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 19.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1RJ1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 % PEG 4000, 0.1 M TRICINE PH 9.5, REMARK 280 0.2 M NAI, PH 9.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.02500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.69000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.11000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.69000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.02500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.11000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 MET A 3 REMARK 465 GLY B 1 REMARK 465 ALA B 2 REMARK 465 MET B 3 REMARK 465 ASN B 4 REMARK 465 LEU B 150 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 ASP A 99 CG OD1 OD2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 PHE A 102 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 PHE B 102 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 125 CB CG CD CE NZ REMARK 470 SER B 126 CB OG REMARK 470 ARG B 147 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 8 OH TYR A 17 1.92 REMARK 500 O LYS A 59 OG SER A 63 2.03 REMARK 500 CE2 TYR A 120 I IOD A 1151 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 42.06 -92.34 REMARK 500 ASN A 16 81.70 -153.39 REMARK 500 ALA A 86 -64.45 -127.90 REMARK 500 PRO A 100 -70.82 -12.52 REMARK 500 LYS A 101 -51.51 -17.82 REMARK 500 LYS A 122 128.64 -39.04 REMARK 500 PHE A 128 57.47 -144.36 REMARK 500 ASN B 64 70.97 46.57 REMARK 500 LYS B 97 46.20 -152.97 REMARK 500 LYS B 101 -98.95 70.98 REMARK 500 SER B 124 118.06 142.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO B 100 LYS B 101 -34.18 REMARK 500 GLY B 123 SER B 124 -48.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1156 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1157 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1158 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1159 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1151 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1152 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1153 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1154 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1156 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1157 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B1158 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RJ1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROMTOBACCO REMARK 900 RELATED ID: 1RJ4 RELATED DB: PDB REMARK 900 STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCOIN COMPLEX REMARK 900 WITH CD2+ REMARK 900 RELATED ID: 2CJ4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO REMARK 900 AT PH 4.6 REMARK 900 RELATED ID: 2CJ5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO REMARK 900 (PH 5.0) REMARK 900 RELATED ID: 2CJ6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO REMARK 900 (PH 7.5) REMARK 900 RELATED ID: 2CJ7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO REMARK 900 (PH 9.0) DBREF 2CJ8 A 1 3 PDB 2CJ8 2CJ8 1 3 DBREF 2CJ8 A 4 150 UNP O49908 O49908_TOBAC 20 166 DBREF 2CJ8 B 1 3 PDB 2CJ8 2CJ8 1 3 DBREF 2CJ8 B 4 150 UNP O49908 O49908_TOBAC 20 166 SEQRES 1 A 150 GLY ALA MET ASN ASN LEU VAL GLU THR THR CYS LYS ASN SEQRES 2 A 150 THR PRO ASN TYR GLN LEU CYS LEU LYS THR LEU LEU SER SEQRES 3 A 150 ASP LYS ARG SER ALA THR GLY ASP ILE THR THR LEU ALA SEQRES 4 A 150 LEU ILE MET VAL ASP ALA ILE LYS ALA LYS ALA ASN GLN SEQRES 5 A 150 ALA ALA VAL THR ILE SER LYS LEU ARG HIS SER ASN PRO SEQRES 6 A 150 PRO ALA ALA TRP LYS GLY PRO LEU LYS ASN CYS ALA PHE SEQRES 7 A 150 SER TYR LYS VAL ILE LEU THR ALA SER LEU PRO GLU ALA SEQRES 8 A 150 ILE GLU ALA LEU THR LYS GLY ASP PRO LYS PHE ALA GLU SEQRES 9 A 150 ASP GLY MET VAL GLY SER SER GLY ASP ALA GLN GLU CYS SEQRES 10 A 150 GLU GLU TYR PHE LYS GLY SER LYS SER PRO PHE SER ALA SEQRES 11 A 150 LEU ASN ILE ALA VAL HIS GLU LEU SER ASP VAL GLY ARG SEQRES 12 A 150 ALA ILE VAL ARG ASN LEU LEU SEQRES 1 B 150 GLY ALA MET ASN ASN LEU VAL GLU THR THR CYS LYS ASN SEQRES 2 B 150 THR PRO ASN TYR GLN LEU CYS LEU LYS THR LEU LEU SER SEQRES 3 B 150 ASP LYS ARG SER ALA THR GLY ASP ILE THR THR LEU ALA SEQRES 4 B 150 LEU ILE MET VAL ASP ALA ILE LYS ALA LYS ALA ASN GLN SEQRES 5 B 150 ALA ALA VAL THR ILE SER LYS LEU ARG HIS SER ASN PRO SEQRES 6 B 150 PRO ALA ALA TRP LYS GLY PRO LEU LYS ASN CYS ALA PHE SEQRES 7 B 150 SER TYR LYS VAL ILE LEU THR ALA SER LEU PRO GLU ALA SEQRES 8 B 150 ILE GLU ALA LEU THR LYS GLY ASP PRO LYS PHE ALA GLU SEQRES 9 B 150 ASP GLY MET VAL GLY SER SER GLY ASP ALA GLN GLU CYS SEQRES 10 B 150 GLU GLU TYR PHE LYS GLY SER LYS SER PRO PHE SER ALA SEQRES 11 B 150 LEU ASN ILE ALA VAL HIS GLU LEU SER ASP VAL GLY ARG SEQRES 12 B 150 ALA ILE VAL ARG ASN LEU LEU HET IOD A1151 1 HET IOD A1152 1 HET IOD A1153 1 HET IOD A1154 1 HET IOD A1155 1 HET IOD A1156 1 HET IOD A1157 1 HET IOD A1158 1 HET IOD A1159 1 HET IOD B1150 1 HET IOD B1151 1 HET IOD B1152 1 HET IOD B1153 1 HET IOD B1154 1 HET IOD B1155 1 HET IOD B1156 1 HET IOD B1157 1 HET IOD B1158 1 HETNAM IOD IODIDE ION FORMUL 3 IOD 18(I 1-) FORMUL 21 HOH *50(H2 O) HELIX 1 1 ASN A 4 ASN A 13 1 10 HELIX 2 2 ASN A 16 SER A 26 1 11 HELIX 3 3 ASP A 27 ALA A 31 5 5 HELIX 4 4 ASP A 34 HIS A 62 1 29 HELIX 5 5 PRO A 66 ALA A 68 5 3 HELIX 6 6 TRP A 69 ALA A 86 1 18 HELIX 7 7 ALA A 86 GLY A 98 1 13 HELIX 8 8 PRO A 100 TYR A 120 1 21 HELIX 9 9 PHE A 128 LEU A 150 1 23 HELIX 10 10 ASN B 5 ASN B 13 1 9 HELIX 11 11 ASN B 16 SER B 26 1 11 HELIX 12 12 ASP B 27 THR B 32 5 6 HELIX 13 13 ASP B 34 HIS B 62 1 29 HELIX 14 14 PRO B 66 ALA B 68 5 3 HELIX 15 15 TRP B 69 ALA B 86 1 18 HELIX 16 16 ALA B 86 GLY B 98 1 13 HELIX 17 17 PHE B 102 GLU B 119 1 18 HELIX 18 18 TYR B 120 LYS B 122 5 3 HELIX 19 19 PHE B 128 LEU B 149 1 22 SSBOND 1 CYS A 11 CYS A 20 1555 1555 2.05 SSBOND 2 CYS A 76 CYS A 117 1555 1555 2.06 SSBOND 3 CYS B 11 CYS B 20 1555 1555 2.06 SSBOND 4 CYS B 76 CYS B 117 1555 1555 2.03 SITE 1 AC1 3 SER A 79 GLU A 116 TYR A 120 SITE 1 AC2 2 TYR A 120 LYS B 70 SITE 1 AC3 1 ARG A 61 SITE 1 AC4 1 PRO A 72 SITE 1 AC5 1 GLN A 115 SITE 1 AC6 1 HOH A2003 SITE 1 AC7 3 TYR A 17 GLU B 8 LEU B 21 SITE 1 AC8 2 GLU A 137 HOH A2020 SITE 1 AC9 1 LEU A 19 SITE 1 BC1 2 LYS A 125 TYR B 120 SITE 1 BC2 2 SER B 58 ARG B 61 SITE 1 BC3 2 GLU B 137 HOH B2024 SITE 1 BC4 1 PRO B 127 SITE 1 BC5 1 TYR B 120 SITE 1 BC6 1 ILE B 133 SITE 1 BC7 3 GLU A 8 TYR B 17 GLN B 18 SITE 1 BC8 1 LYS B 81 CRYST1 40.050 50.220 131.380 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024969 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019912 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007612 0.00000