HEADER TRANSFERASE 24-APR-06 2CKZ TITLE X-RAY STRUCTURE OF RNA POLYMERASE III SUBCOMPLEX C17-C25. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-DIRECTED RNA POLYMERASE III 18 KD POLYPEPTIDE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: C17,18.6 KDA PROTEIN IN CCT3-CCT8 INTERGENIC REGION; COMPND 5 EC: 2.7.7.6; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA-DIRECTED RNA POLYMERASE III 25 KD POLYPEPTIDE; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: C25; COMPND 11 EC: 2.7.7.6; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21B; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 4932; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS DNA-DIRECTED RNA POLYMERASE, MULTIPROTEIN COMPLEX, KEYWDS 2 NUCLEOTIDYLTRANSFERASE, NUCLEAR PROTEIN, HYPOTHETICAL PROTEIN, KEYWDS 3 EUKARYOTIC NUCLEIC ACID POLYMERASE, CLASS III GENE TRANSCRIPTION, KEYWDS 4 TRANSFERASE, TRANSCRIPTION, TRNA SYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR A.J.JASIAK,K.-J.ARMACHE,B.MARTENS,R.-P.JANSEN,P.CRAMER REVDAT 4 08-MAY-24 2CKZ 1 REMARK REVDAT 3 05-JUL-17 2CKZ 1 REMARK REVDAT 2 24-FEB-09 2CKZ 1 VERSN REVDAT 1 13-JUL-06 2CKZ 0 JRNL AUTH A.J.JASIAK,K.-J.ARMACHE,B.MARTENS,R.-P.JANSEN,P.CRAMER JRNL TITL STRUCTURAL BIOLOGY OF RNA POLYMERASE III: SUBCOMPLEX JRNL TITL 2 C17/-C25 X-RAY STRUCTURE AND 11-SUBUNIT ENZYME MODEL JRNL REF MOL.CELL V. 23 71 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 16818233 JRNL DOI 10.1016/J.MOLCEL.2006.05.013 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 21002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.307 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.200 REMARK 3 FREE R VALUE TEST SET COUNT : 994 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -14.16600 REMARK 3 B22 (A**2) : -14.16600 REMARK 3 B33 (A**2) : 28.33100 REMARK 3 B12 (A**2) : -8.29300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : 56.97 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CKZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-APR-06. REMARK 100 THE DEPOSITION ID IS D_1290028556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97894 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21061 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.36667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 164.73333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 123.55000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 205.91667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.18333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 82.36667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 164.73333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 205.91667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 123.55000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 41.18333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 38 REMARK 465 LYS A 39 REMARK 465 SER A 40 REMARK 465 ARG A 41 REMARK 465 SER A 42 REMARK 465 LYS A 43 REMARK 465 GLY A 44 REMARK 465 LYS A 45 REMARK 465 GLN A 46 REMARK 465 ASN A 47 REMARK 465 LYS A 70 REMARK 465 ASN A 71 REMARK 465 PHE A 72 REMARK 465 ILE A 73 REMARK 465 ASN A 74 REMARK 465 GLN A 75 REMARK 465 GLU A 76 REMARK 465 ASP A 77 REMARK 465 GLU A 78 REMARK 465 GLY A 79 REMARK 465 GLU A 80 REMARK 465 GLU A 81 REMARK 465 ARG A 82 REMARK 465 GLU A 83 REMARK 465 SER A 84 REMARK 465 SER A 85 REMARK 465 GLY A 86 REMARK 465 ALA A 87 REMARK 465 LYS A 88 REMARK 465 ASP A 89 REMARK 465 ALA A 90 REMARK 465 GLU A 91 REMARK 465 LYS A 92 REMARK 465 SER A 93 REMARK 465 GLY A 94 REMARK 465 ILE A 95 REMARK 465 SER A 96 REMARK 465 LYS A 97 REMARK 465 MET A 98 REMARK 465 SER A 99 REMARK 465 ASP A 100 REMARK 465 GLU A 101 REMARK 465 SER A 102 REMARK 465 PHE A 103 REMARK 465 ALA A 104 REMARK 465 GLU A 105 REMARK 465 LEU A 106 REMARK 465 MET A 107 REMARK 465 THR A 108 REMARK 465 LYS A 109 REMARK 465 LEU A 110 REMARK 465 ASN A 111 REMARK 465 SER A 112 REMARK 465 PHE A 113 REMARK 465 LYS A 114 REMARK 465 LEU A 115 REMARK 465 PHE A 116 REMARK 465 LYS A 117 REMARK 465 ALA A 118 REMARK 465 GLU A 119 REMARK 465 LYS A 120 REMARK 465 LEU A 121 REMARK 465 GLN A 122 REMARK 465 ILE A 123 REMARK 465 VAL A 124 REMARK 465 ASN A 125 REMARK 465 GLN A 126 REMARK 465 LEU A 127 REMARK 465 PRO A 128 REMARK 465 ALA A 129 REMARK 465 ASN A 130 REMARK 465 MET A 131 REMARK 465 VAL A 132 REMARK 465 HIS A 133 REMARK 465 LEU A 134 REMARK 465 TYR A 135 REMARK 465 SER A 136 REMARK 465 ILE A 137 REMARK 465 VAL A 138 REMARK 465 GLU A 139 REMARK 465 GLU A 140 REMARK 465 CYS A 141 REMARK 465 ASP A 142 REMARK 465 ALA A 143 REMARK 465 ARG A 144 REMARK 465 PHE A 145 REMARK 465 ASP A 146 REMARK 465 GLU A 147 REMARK 465 LYS A 148 REMARK 465 THR A 149 REMARK 465 ILE A 150 REMARK 465 GLU A 151 REMARK 465 GLU A 152 REMARK 465 MET A 153 REMARK 465 LEU A 154 REMARK 465 GLU A 155 REMARK 465 ILE A 156 REMARK 465 ILE A 157 REMARK 465 SER A 158 REMARK 465 ALA A 159 REMARK 465 TYR A 160 REMARK 465 ALA A 161 REMARK 465 GLU B 134 REMARK 465 GLU B 135 REMARK 465 LYS B 159 REMARK 465 PRO B 160 REMARK 465 LYS B 161 REMARK 465 SER B 162 REMARK 465 PRO B 163 REMARK 465 LYS B 164 REMARK 465 GLU B 165 REMARK 465 ARG B 166 REMARK 465 GLU B 167 REMARK 465 LEU B 168 REMARK 465 GLU B 169 REMARK 465 GLU B 170 REMARK 465 ARG B 171 REMARK 465 ALA B 172 REMARK 465 GLN B 173 REMARK 465 LEU B 174 REMARK 465 GLU B 175 REMARK 465 ASN B 176 REMARK 465 GLU B 177 REMARK 465 ILE B 178 REMARK 465 GLU B 179 REMARK 465 GLY B 180 REMARK 465 LYS B 181 REMARK 465 ASN B 182 REMARK 465 GLU B 183 REMARK 465 GLU B 184 REMARK 465 THR B 185 REMARK 465 PRO B 186 REMARK 465 GLN B 187 REMARK 465 ASN B 188 REMARK 465 GLU B 189 REMARK 465 HIS B 214 REMARK 465 HIS B 215 REMARK 465 HIS B 216 REMARK 465 HIS B 217 REMARK 465 HIS B 218 REMARK 465 LYS C 38 REMARK 465 LYS C 39 REMARK 465 SER C 40 REMARK 465 ARG C 41 REMARK 465 SER C 42 REMARK 465 LYS C 43 REMARK 465 GLY C 44 REMARK 465 LYS C 45 REMARK 465 GLN C 46 REMARK 465 ASN C 47 REMARK 465 ASN C 69 REMARK 465 LYS C 70 REMARK 465 ASN C 71 REMARK 465 PHE C 72 REMARK 465 ILE C 73 REMARK 465 ASN C 74 REMARK 465 GLN C 75 REMARK 465 GLU C 76 REMARK 465 ASP C 77 REMARK 465 GLU C 78 REMARK 465 GLY C 79 REMARK 465 GLU C 80 REMARK 465 GLU C 81 REMARK 465 ARG C 82 REMARK 465 GLU C 83 REMARK 465 SER C 84 REMARK 465 SER C 85 REMARK 465 GLY C 86 REMARK 465 ALA C 87 REMARK 465 LYS C 88 REMARK 465 ASP C 89 REMARK 465 ALA C 90 REMARK 465 GLU C 91 REMARK 465 LYS C 92 REMARK 465 SER C 93 REMARK 465 GLY C 94 REMARK 465 LEU D 59 REMARK 465 LYS D 60 REMARK 465 PRO D 61 REMARK 465 GLY D 62 REMARK 465 ASP D 63 REMARK 465 GLY D 64 REMARK 465 SER D 65 REMARK 465 SER D 66 REMARK 465 LYS D 159 REMARK 465 PRO D 160 REMARK 465 LYS D 161 REMARK 465 SER D 162 REMARK 465 PRO D 163 REMARK 465 LYS D 164 REMARK 465 GLU D 165 REMARK 465 ARG D 166 REMARK 465 GLU D 167 REMARK 465 LEU D 168 REMARK 465 GLU D 169 REMARK 465 GLU D 170 REMARK 465 ARG D 171 REMARK 465 ALA D 172 REMARK 465 GLN D 173 REMARK 465 LEU D 174 REMARK 465 GLU D 175 REMARK 465 ASN D 176 REMARK 465 GLU D 177 REMARK 465 ILE D 178 REMARK 465 GLU D 179 REMARK 465 GLY D 180 REMARK 465 LYS D 181 REMARK 465 ASN D 182 REMARK 465 GLU D 183 REMARK 465 GLU D 184 REMARK 465 THR D 185 REMARK 465 PRO D 186 REMARK 465 GLN D 187 REMARK 465 ASN D 188 REMARK 465 GLU D 189 REMARK 465 LYS D 190 REMARK 465 HIS D 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 69 CA C O CB CG OD1 ND2 REMARK 470 HIS B 213 CA C O CB CG ND1 CD2 REMARK 470 HIS B 213 CE1 NE2 REMARK 470 ALA C 161 CA C O CB REMARK 470 HIS D 217 CA C O CB CG ND1 CD2 REMARK 470 HIS D 217 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 5 100.95 -177.09 REMARK 500 ALA A 9 148.95 171.95 REMARK 500 LYS A 18 -71.94 -64.12 REMARK 500 HIS A 52 105.95 -14.59 REMARK 500 ASP B 21 95.66 -58.83 REMARK 500 PRO B 40 116.92 -36.10 REMARK 500 VAL B 42 -78.83 -123.65 REMARK 500 THR B 47 175.99 172.27 REMARK 500 LYS B 78 74.10 -152.87 REMARK 500 LEU B 101 48.84 -107.02 REMARK 500 LEU B 102 88.12 25.60 REMARK 500 GLU B 117 109.26 -57.52 REMARK 500 SER B 126 35.37 73.57 REMARK 500 MET B 132 77.11 -172.95 REMARK 500 CYS B 200 75.13 -160.75 REMARK 500 SER B 209 -9.61 -55.23 REMARK 500 LYS C 2 121.39 -32.81 REMARK 500 ALA C 9 170.80 178.77 REMARK 500 LYS C 18 -74.33 -55.37 REMARK 500 PHE C 19 -34.61 -32.95 REMARK 500 GLN C 31 -36.78 -29.21 REMARK 500 LYS C 32 -70.87 -61.81 REMARK 500 PRO C 53 67.37 -64.24 REMARK 500 GLU C 54 -22.91 -169.74 REMARK 500 LEU C 127 106.79 -33.28 REMARK 500 GLU C 140 73.74 54.72 REMARK 500 TYR C 160 40.02 -98.77 REMARK 500 PRO D 14 173.25 -56.72 REMARK 500 HIS D 19 -94.00 -29.24 REMARK 500 THR D 22 -73.72 -54.57 REMARK 500 PRO D 40 -89.46 -8.17 REMARK 500 VAL D 42 -72.16 -123.69 REMARK 500 PHE D 72 -155.57 -124.27 REMARK 500 ARG D 73 119.09 -167.02 REMARK 500 LYS D 78 74.14 -166.63 REMARK 500 GLU D 83 151.82 -39.12 REMARK 500 LEU D 101 60.19 -111.04 REMARK 500 LEU D 102 179.03 46.07 REMARK 500 SER D 126 38.34 31.60 REMARK 500 GLU D 134 16.96 -60.66 REMARK 500 GLU D 135 -44.78 -148.19 REMARK 500 ASN D 143 -5.94 74.80 REMARK 500 SER D 209 7.76 -56.14 REMARK 500 GLU D 212 -44.76 -27.12 REMARK 500 HIS D 213 48.11 97.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. DBREF 2CKZ A 1 161 UNP P47076 YJB1_YEAST 1 161 DBREF 2CKZ B 1 212 UNP P35718 RPC25_YEAST 1 212 DBREF 2CKZ B 213 218 PDB 2CKZ 2CKZ 213 218 DBREF 2CKZ C 1 161 UNP P47076 YJB1_YEAST 1 161 DBREF 2CKZ D 1 212 UNP P35718 RPC25_YEAST 1 212 DBREF 2CKZ D 213 218 PDB 2CKZ 2CKZ 213 218 SEQRES 1 A 161 MET LYS VAL LEU GLU GLU ARG ASN ALA PHE LEU SER ASP SEQRES 2 A 161 TYR GLU VAL LEU LYS PHE LEU THR ASP LEU GLU LYS LYS SEQRES 3 A 161 HIS LEU TRP ASP GLN LYS SER LEU ALA ALA LEU LYS LYS SEQRES 4 A 161 SER ARG SER LYS GLY LYS GLN ASN ARG PRO TYR ASN HIS SEQRES 5 A 161 PRO GLU LEU GLN GLY ILE THR ARG ASN VAL VAL ASN TYR SEQRES 6 A 161 LEU SER ILE ASN LYS ASN PHE ILE ASN GLN GLU ASP GLU SEQRES 7 A 161 GLY GLU GLU ARG GLU SER SER GLY ALA LYS ASP ALA GLU SEQRES 8 A 161 LYS SER GLY ILE SER LYS MET SER ASP GLU SER PHE ALA SEQRES 9 A 161 GLU LEU MET THR LYS LEU ASN SER PHE LYS LEU PHE LYS SEQRES 10 A 161 ALA GLU LYS LEU GLN ILE VAL ASN GLN LEU PRO ALA ASN SEQRES 11 A 161 MET VAL HIS LEU TYR SER ILE VAL GLU GLU CYS ASP ALA SEQRES 12 A 161 ARG PHE ASP GLU LYS THR ILE GLU GLU MET LEU GLU ILE SEQRES 13 A 161 ILE SER ALA TYR ALA SEQRES 1 B 218 MET PHE ILE LEU SER LYS ILE ALA ASP LEU VAL ARG ILE SEQRES 2 B 218 PRO PRO ASP GLN PHE HIS ARG ASP THR ILE SER ALA ILE SEQRES 3 B 218 THR HIS GLN LEU ASN ASN LYS PHE ALA ASN LYS ILE ILE SEQRES 4 B 218 PRO ASN VAL GLY LEU CYS ILE THR ILE TYR ASP LEU LEU SEQRES 5 B 218 THR VAL GLU GLU GLY GLN LEU LYS PRO GLY ASP GLY SER SEQRES 6 B 218 SER TYR ILE ASN VAL THR PHE ARG ALA VAL VAL PHE LYS SEQRES 7 B 218 PRO PHE LEU GLY GLU ILE VAL THR GLY TRP ILE SER LYS SEQRES 8 B 218 CYS THR ALA GLU GLY ILE LYS VAL SER LEU LEU GLY ILE SEQRES 9 B 218 PHE ASP ASP ILE PHE ILE PRO GLN ASN MET LEU PHE GLU SEQRES 10 B 218 GLY CYS TYR TYR THR PRO GLU GLU SER ALA TRP ILE TRP SEQRES 11 B 218 PRO MET ASP GLU GLU THR LYS LEU TYR PHE ASP VAL ASN SEQRES 12 B 218 GLU LYS ILE ARG PHE ARG ILE GLU ARG GLU VAL PHE VAL SEQRES 13 B 218 ASP VAL LYS PRO LYS SER PRO LYS GLU ARG GLU LEU GLU SEQRES 14 B 218 GLU ARG ALA GLN LEU GLU ASN GLU ILE GLU GLY LYS ASN SEQRES 15 B 218 GLU GLU THR PRO GLN ASN GLU LYS PRO PRO ALA TYR ALA SEQRES 16 B 218 LEU LEU GLY SER CYS GLN THR ASP GLY MET GLY LEU VAL SEQRES 17 B 218 SER TRP TRP GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 161 MET LYS VAL LEU GLU GLU ARG ASN ALA PHE LEU SER ASP SEQRES 2 C 161 TYR GLU VAL LEU LYS PHE LEU THR ASP LEU GLU LYS LYS SEQRES 3 C 161 HIS LEU TRP ASP GLN LYS SER LEU ALA ALA LEU LYS LYS SEQRES 4 C 161 SER ARG SER LYS GLY LYS GLN ASN ARG PRO TYR ASN HIS SEQRES 5 C 161 PRO GLU LEU GLN GLY ILE THR ARG ASN VAL VAL ASN TYR SEQRES 6 C 161 LEU SER ILE ASN LYS ASN PHE ILE ASN GLN GLU ASP GLU SEQRES 7 C 161 GLY GLU GLU ARG GLU SER SER GLY ALA LYS ASP ALA GLU SEQRES 8 C 161 LYS SER GLY ILE SER LYS MET SER ASP GLU SER PHE ALA SEQRES 9 C 161 GLU LEU MET THR LYS LEU ASN SER PHE LYS LEU PHE LYS SEQRES 10 C 161 ALA GLU LYS LEU GLN ILE VAL ASN GLN LEU PRO ALA ASN SEQRES 11 C 161 MET VAL HIS LEU TYR SER ILE VAL GLU GLU CYS ASP ALA SEQRES 12 C 161 ARG PHE ASP GLU LYS THR ILE GLU GLU MET LEU GLU ILE SEQRES 13 C 161 ILE SER ALA TYR ALA SEQRES 1 D 218 MET PHE ILE LEU SER LYS ILE ALA ASP LEU VAL ARG ILE SEQRES 2 D 218 PRO PRO ASP GLN PHE HIS ARG ASP THR ILE SER ALA ILE SEQRES 3 D 218 THR HIS GLN LEU ASN ASN LYS PHE ALA ASN LYS ILE ILE SEQRES 4 D 218 PRO ASN VAL GLY LEU CYS ILE THR ILE TYR ASP LEU LEU SEQRES 5 D 218 THR VAL GLU GLU GLY GLN LEU LYS PRO GLY ASP GLY SER SEQRES 6 D 218 SER TYR ILE ASN VAL THR PHE ARG ALA VAL VAL PHE LYS SEQRES 7 D 218 PRO PHE LEU GLY GLU ILE VAL THR GLY TRP ILE SER LYS SEQRES 8 D 218 CYS THR ALA GLU GLY ILE LYS VAL SER LEU LEU GLY ILE SEQRES 9 D 218 PHE ASP ASP ILE PHE ILE PRO GLN ASN MET LEU PHE GLU SEQRES 10 D 218 GLY CYS TYR TYR THR PRO GLU GLU SER ALA TRP ILE TRP SEQRES 11 D 218 PRO MET ASP GLU GLU THR LYS LEU TYR PHE ASP VAL ASN SEQRES 12 D 218 GLU LYS ILE ARG PHE ARG ILE GLU ARG GLU VAL PHE VAL SEQRES 13 D 218 ASP VAL LYS PRO LYS SER PRO LYS GLU ARG GLU LEU GLU SEQRES 14 D 218 GLU ARG ALA GLN LEU GLU ASN GLU ILE GLU GLY LYS ASN SEQRES 15 D 218 GLU GLU THR PRO GLN ASN GLU LYS PRO PRO ALA TYR ALA SEQRES 16 D 218 LEU LEU GLY SER CYS GLN THR ASP GLY MET GLY LEU VAL SEQRES 17 D 218 SER TRP TRP GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 SER A 12 HIS A 27 1 16 HELIX 2 2 ASP A 30 LEU A 37 1 8 HELIX 3 3 HIS A 52 ILE A 68 1 17 HELIX 4 4 PRO B 15 GLN B 17 5 3 HELIX 5 5 ASP B 21 ALA B 35 1 15 HELIX 6 6 PRO B 111 MET B 114 5 4 HELIX 7 7 VAL B 208 GLU B 212 1 5 HELIX 8 8 SER C 12 HIS C 27 1 16 HELIX 9 9 ASP C 30 LEU C 37 1 8 HELIX 10 10 HIS C 52 ILE C 68 1 17 HELIX 11 11 SER C 99 PHE C 113 1 15 HELIX 12 12 PHE C 116 LEU C 127 1 12 HELIX 13 13 ASN C 130 VAL C 138 1 9 HELIX 14 14 GLU C 140 ALA C 143 5 4 HELIX 15 15 ASP C 146 TYR C 160 1 15 HELIX 16 16 PRO D 15 GLN D 17 5 3 HELIX 17 17 ASP D 21 ALA D 35 1 15 HELIX 18 18 PRO D 111 MET D 114 5 4 HELIX 19 19 VAL D 208 GLU D 212 5 5 SHEET 1 AA 5 LYS A 2 LEU A 11 0 SHEET 2 AA 5 PHE B 2 ILE B 13 -1 O PHE B 2 N LEU A 11 SHEET 3 AA 5 SER B 66 PHE B 77 -1 O SER B 66 N ILE B 13 SHEET 4 AA 5 GLY B 43 VAL B 54 -1 O LEU B 44 N PHE B 77 SHEET 5 AA 5 LYS B 37 ILE B 39 -1 O LYS B 37 N CYS B 45 SHEET 1 AB 4 LYS A 2 LEU A 11 0 SHEET 2 AB 4 PHE B 2 ILE B 13 -1 O PHE B 2 N LEU A 11 SHEET 3 AB 4 SER B 66 PHE B 77 -1 O SER B 66 N ILE B 13 SHEET 4 AB 4 GLN B 58 LEU B 59 -1 O GLN B 58 N TYR B 67 SHEET 1 BA 7 ILE B 84 THR B 93 0 SHEET 2 BA 7 LYS B 145 PHE B 155 -1 O ILE B 146 N GLY B 87 SHEET 3 BA 7 TYR B 194 SER B 199 -1 O ALA B 195 N VAL B 154 SHEET 4 BA 7 ILE B 108 PRO B 111 1 O PHE B 109 N GLY B 198 SHEET 5 BA 7 GLY B 96 SER B 100 -1 O ILE B 97 N ILE B 110 SHEET 6 BA 7 ILE B 84 THR B 93 -1 O TRP B 88 N SER B 100 SHEET 7 BA 7 ILE B 84 THR B 93 0 SHEET 1 BB 3 TYR B 120 THR B 122 0 SHEET 2 BB 3 ALA B 127 PRO B 131 -1 O ALA B 127 N THR B 122 SHEET 3 BB 3 LYS B 137 PHE B 140 -1 O LEU B 138 N TRP B 130 SHEET 1 CA 5 VAL C 3 LEU C 11 0 SHEET 2 CA 5 PHE D 2 VAL D 11 -1 O PHE D 2 N LEU C 11 SHEET 3 CA 5 ILE D 68 PHE D 77 -1 O ILE D 68 N VAL D 11 SHEET 4 CA 5 GLY D 43 THR D 53 -1 O LEU D 44 N PHE D 77 SHEET 5 CA 5 ILE D 38 ILE D 39 -1 N ILE D 39 O GLY D 43 SHEET 1 DA 7 ILE D 84 THR D 93 0 SHEET 2 DA 7 LYS D 145 PHE D 155 -1 O ILE D 146 N GLY D 87 SHEET 3 DA 7 TYR D 194 SER D 199 -1 O ALA D 195 N VAL D 154 SHEET 4 DA 7 PHE D 105 PRO D 111 1 O ASP D 107 N LEU D 196 SHEET 5 DA 7 GLY D 96 LEU D 101 -1 O ILE D 97 N ILE D 110 SHEET 6 DA 7 ILE D 84 THR D 93 -1 O TRP D 88 N SER D 100 SHEET 7 DA 7 ILE D 84 THR D 93 0 SHEET 1 DB 3 TYR D 120 THR D 122 0 SHEET 2 DB 3 ALA D 127 PRO D 131 -1 O ALA D 127 N THR D 122 SHEET 3 DB 3 LYS D 137 PHE D 140 -1 O LEU D 138 N TRP D 130 CISPEP 1 LYS B 190 PRO B 191 0 -0.13 CRYST1 138.230 138.230 247.100 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007234 0.004177 0.000000 0.00000 SCALE2 0.000000 0.008353 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004047 0.00000