data_2CLD # _entry.id 2CLD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CLD pdb_00002cld 10.2210/pdb2cld/pdb PDBE EBI-28585 ? ? WWPDB D_1290028585 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CL0 unspecified 'CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H -RAS P21 IN COMPLEX WITH GPPNHP' PDB 2CL6 unspecified 'CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H -RAS P21 IN COMPLEX WITH S-CAGED GTP' PDB 2CL7 unspecified 'CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H -RAS P21 IN COMPLEX WITH GTP' PDB 2CLC unspecified 'CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H -RAS P21 IN COMPLEX WITH GTP (2)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CLD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-04-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Klink, B.U.' 1 'Goody, R.S.' 2 'Scheidig, A.J.' 3 # _citation.id primary _citation.title 'A Newly Designed Microspectrofluorometer for Kinetic Studies on Protein Crystals in Combination with X-Ray Diffraction' _citation.journal_abbrev Biophys.J. _citation.journal_volume 91 _citation.page_first 981 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM BIOJAU _citation.country US _citation.journal_id_ISSN 0006-3495 _citation.journal_id_CSD 0030 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16698776 _citation.pdbx_database_id_DOI 10.1529/BIOPHYSJ.105.078931 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Klink, B.U.' 1 ? primary 'Goody, R.S.' 2 ? primary 'Scheidig, A.J.' 3 ? # _cell.entry_id 2CLD _cell.length_a 69.410 _cell.length_b 69.410 _cell.length_c 34.760 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CLD _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPASE HRAS' 18859.127 1 ? YES 'RESIDUES 1-166' 'AN IANBD FLUOROPHORE WAS ATTACHED TO CYS-32' 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 water nat water 18.015 199 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'H-RAS P21, TRANSFORMING PROTEIN P21, P21RAS, H-RAS-1, C-H-RAS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKSDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH ; _entity_poly.pdbx_seq_one_letter_code_can ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKSDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLU n 1 4 TYR n 1 5 LYS n 1 6 LEU n 1 7 VAL n 1 8 VAL n 1 9 VAL n 1 10 GLY n 1 11 ALA n 1 12 GLY n 1 13 GLY n 1 14 VAL n 1 15 GLY n 1 16 LYS n 1 17 SER n 1 18 ALA n 1 19 LEU n 1 20 THR n 1 21 ILE n 1 22 GLN n 1 23 LEU n 1 24 ILE n 1 25 GLN n 1 26 ASN n 1 27 HIS n 1 28 PHE n 1 29 VAL n 1 30 ASP n 1 31 GLU n 1 32 TYR n 1 33 ASP n 1 34 PRO n 1 35 THR n 1 36 ILE n 1 37 GLU n 1 38 ASP n 1 39 SER n 1 40 TYR n 1 41 ARG n 1 42 LYS n 1 43 GLN n 1 44 VAL n 1 45 VAL n 1 46 ILE n 1 47 ASP n 1 48 GLY n 1 49 GLU n 1 50 THR n 1 51 CYS n 1 52 LEU n 1 53 LEU n 1 54 ASP n 1 55 ILE n 1 56 LEU n 1 57 ASP n 1 58 THR n 1 59 ALA n 1 60 GLY n 1 61 GLN n 1 62 GLU n 1 63 GLU n 1 64 TYR n 1 65 SER n 1 66 ALA n 1 67 MET n 1 68 ARG n 1 69 ASP n 1 70 GLN n 1 71 TYR n 1 72 MET n 1 73 ARG n 1 74 THR n 1 75 GLY n 1 76 GLU n 1 77 GLY n 1 78 PHE n 1 79 LEU n 1 80 CYS n 1 81 VAL n 1 82 PHE n 1 83 ALA n 1 84 ILE n 1 85 ASN n 1 86 ASN n 1 87 THR n 1 88 LYS n 1 89 SER n 1 90 PHE n 1 91 GLU n 1 92 ASP n 1 93 ILE n 1 94 HIS n 1 95 GLN n 1 96 TYR n 1 97 ARG n 1 98 GLU n 1 99 GLN n 1 100 ILE n 1 101 LYS n 1 102 ARG n 1 103 VAL n 1 104 LYS n 1 105 ASP n 1 106 SER n 1 107 ASP n 1 108 ASP n 1 109 VAL n 1 110 PRO n 1 111 MET n 1 112 VAL n 1 113 LEU n 1 114 VAL n 1 115 GLY n 1 116 ASN n 1 117 LYS n 1 118 SER n 1 119 ASP n 1 120 LEU n 1 121 ALA n 1 122 ALA n 1 123 ARG n 1 124 THR n 1 125 VAL n 1 126 GLU n 1 127 SER n 1 128 ARG n 1 129 GLN n 1 130 ALA n 1 131 GLN n 1 132 ASP n 1 133 LEU n 1 134 ALA n 1 135 ARG n 1 136 SER n 1 137 TYR n 1 138 GLY n 1 139 ILE n 1 140 PRO n 1 141 TYR n 1 142 ILE n 1 143 GLU n 1 144 THR n 1 145 SER n 1 146 ALA n 1 147 LYS n 1 148 THR n 1 149 ARG n 1 150 GLN n 1 151 GLY n 1 152 VAL n 1 153 GLU n 1 154 ASP n 1 155 ALA n 1 156 PHE n 1 157 TYR n 1 158 THR n 1 159 LEU n 1 160 VAL n 1 161 ARG n 1 162 GLU n 1 163 ILE n 1 164 ARG n 1 165 GLN n 1 166 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain CK600K _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PTAC RAS' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASH_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P01112 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CLD _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01112 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 166 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 166 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2CLD _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id X _struct_ref_seq_dif.seq_num 118 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P01112 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 118 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 118 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2CLD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 43.5 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.20 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN SOLUTION: 13.35 MG/ML PROTEIN, 64 MM TRIS PH 7.6, 20 MM MAGNESIUM CHLORIDE, 10 MM DTT, 0,1 MM SODIUM AZIDE; RESERVOIR SOLUTION: 100 MM HEPES PH 7.2, 200 MM MAGNESIUM ACETATE, 16% PEG 8000 (FRESHLY PREPARED) MIXTURE OF EQUAL VOLUMES OF PROTEIN AND RESERVOIR SOLUTION, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K ; # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2004-12-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.939 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.939 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2CLD _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 69.340 _reflns.d_resolution_high 1.220 _reflns.number_obs 47013 _reflns.number_all ? _reflns.percent_possible_obs 94.1 _reflns.pdbx_Rmerge_I_obs 0.05000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.5000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.090 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.22 _reflns_shell.d_res_low 1.25 _reflns_shell.percent_possible_all 55.5 _reflns_shell.Rmerge_I_obs 0.46000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.000 _reflns_shell.pdbx_redundancy 4.21 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2CLD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 44702 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 69.34 _refine.ls_d_res_high 1.22 _refine.ls_percent_reflns_obs 94.1 _refine.ls_R_factor_obs 0.150 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.149 _refine.ls_R_factor_R_free 0.176 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 2294 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.977 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.B_iso_mean 17.04 _refine.aniso_B[1][1] -0.96000 _refine.aniso_B[2][2] -0.96000 _refine.aniso_B[3][3] 1.92000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. THE STRUCTURE WAS REFINED USING TWO ALTERNATIVE CONFORMATIONS FOR THE WHOLE PROTEIN CHAIN. RESIDUES 30-32 ARE DISORDERED. THE CLOSE CONTACTS WITH WATER MOLECULES ARE CAUSED BY THE TREATMENT OF THE WHOLE PROTEIN CHAIN WITH TWO ALTERNATIVE CONFORMATIONS, BUT ONLY ONE POSITION PER WATER MOLECULE. ; _refine.pdbx_starting_model 'PDB ENTRY 4Q21' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.055 _refine.pdbx_overall_ESU_R_Free 0.056 _refine.overall_SU_ML 0.044 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.111 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1294 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 199 _refine_hist.number_atoms_total 1522 _refine_hist.d_res_high 1.22 _refine_hist.d_res_low 69.34 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 2676 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2402 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.534 1.984 ? 3622 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.813 3.000 ? 5574 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.437 5.000 ? 322 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.221 24.242 ? 132 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.017 15.000 ? 472 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.410 15.000 ? 22 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 408 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2952 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 542 'X-RAY DIFFRACTION' ? r_nbd_refined 0.245 0.200 ? 368 'X-RAY DIFFRACTION' ? r_nbd_other 0.183 0.200 ? 1910 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.179 0.200 ? 969 'X-RAY DIFFRACTION' ? r_nbtor_other 0.080 0.200 ? 1218 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.246 0.200 ? 236 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.182 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.289 0.200 ? 48 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.193 0.200 ? 37 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.089 1.500 ? 2107 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.183 2.000 ? 2602 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.930 3.000 ? 1237 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.622 4.500 ? 1020 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.22 _refine_ls_shell.d_res_low 1.25 _refine_ls_shell.number_reflns_R_work 1993 _refine_ls_shell.R_factor_R_work 0.3140 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3450 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2CLD _struct.title 'CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H-RAS P21 IN COMPLEX WITH GDP (2)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CLD _struct_keywords.pdbx_keywords 'NUCLEOTIDE-BINDING PROTEIN' _struct_keywords.text 'NUCLEOTIDE-BINDING PROTEIN, GUANINE NUCLEOTIDE BINDING PROTEIN, PALMITATE, CAGED GTP, PRENYLATION, FLUORESCENCE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 15 ? ASN A 26 ? GLY X 15 ASN X 26 1 ? 12 HELX_P HELX_P2 2 SER A 65 ? ARG A 73 ? SER X 65 ARG X 73 1 ? 9 HELX_P HELX_P3 3 ASN A 86 ? ASP A 92 ? ASN X 86 ASP X 92 1 ? 7 HELX_P HELX_P4 4 ASP A 92 ? LYS A 104 ? ASP X 92 LYS X 104 1 ? 13 HELX_P HELX_P5 5 GLU A 126 ? GLY A 138 ? GLU X 126 GLY X 138 1 ? 13 HELX_P HELX_P6 6 GLY A 151 ? HIS A 166 ? GLY X 151 HIS X 166 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 17 OG A ? ? 1_555 B MG . MG A ? X SER 17 X MG 168 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc2 metalc ? ? B MG . MG A ? ? 1_555 C GDP . O2B A ? X MG 168 X GDP 180 1_555 ? ? ? ? ? ? ? 2.336 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id XA _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense XA 1 2 ? anti-parallel XA 2 3 ? parallel XA 3 4 ? parallel XA 4 5 ? parallel XA 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id XA 1 ASP A 38 ? ILE A 46 ? ASP X 38 ILE X 46 XA 2 GLU A 49 ? ASP A 57 ? GLU X 49 ASP X 57 XA 3 GLU A 3 ? VAL A 9 ? GLU X 3 VAL X 9 XA 4 GLY A 77 ? ALA A 83 ? GLY X 77 ALA X 83 XA 5 MET A 111 ? ASN A 116 ? MET X 111 ASN X 116 XA 6 TYR A 141 ? GLU A 143 ? TYR X 141 GLU X 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id XA 1 2 N ILE A 46 ? N ILE X 46 O GLU A 49 ? O GLU X 49 XA 2 3 N ASP A 54 ? N ASP X 54 O TYR A 4 ? O TYR X 4 XA 3 4 N VAL A 7 ? N VAL X 7 O GLY A 77 ? O GLY X 77 XA 4 5 N CYS A 80 ? N CYS X 80 O VAL A 112 ? O VAL X 112 XA 5 6 N GLY A 115 ? N GLY X 115 O ILE A 142 ? O ILE X 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X MG 168 ? 6 'BINDING SITE FOR RESIDUE MG X 168' AC2 Software X GDP 180 ? 26 'BINDING SITE FOR RESIDUE GDP X 180' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 17 ? SER X 17 . ? 1_555 ? 2 AC1 6 GDP C . ? GDP X 180 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH X 2102 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH X 2122 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH X 2170 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH X 2176 . ? 1_555 ? 7 AC2 26 GLY A 13 ? GLY X 13 . ? 1_555 ? 8 AC2 26 VAL A 14 ? VAL X 14 . ? 1_555 ? 9 AC2 26 GLY A 15 ? GLY X 15 . ? 1_555 ? 10 AC2 26 LYS A 16 ? LYS X 16 . ? 1_555 ? 11 AC2 26 SER A 17 ? SER X 17 . ? 1_555 ? 12 AC2 26 ALA A 18 ? ALA X 18 . ? 1_555 ? 13 AC2 26 PHE A 28 ? PHE X 28 . ? 1_555 ? 14 AC2 26 VAL A 29 ? VAL X 29 . ? 1_555 ? 15 AC2 26 ASN A 116 ? ASN X 116 . ? 1_555 ? 16 AC2 26 LYS A 117 ? LYS X 117 . ? 1_555 ? 17 AC2 26 ASP A 119 ? ASP X 119 . ? 1_555 ? 18 AC2 26 LEU A 120 ? LEU X 120 . ? 1_555 ? 19 AC2 26 SER A 145 ? SER X 145 . ? 1_555 ? 20 AC2 26 ALA A 146 ? ALA X 146 . ? 1_555 ? 21 AC2 26 LYS A 147 ? LYS X 147 . ? 1_555 ? 22 AC2 26 MG B . ? MG X 168 . ? 1_555 ? 23 AC2 26 HOH D . ? HOH X 2047 . ? 3_665 ? 24 AC2 26 HOH D . ? HOH X 2062 . ? 1_555 ? 25 AC2 26 HOH D . ? HOH X 2084 . ? 1_555 ? 26 AC2 26 HOH D . ? HOH X 2122 . ? 1_555 ? 27 AC2 26 HOH D . ? HOH X 2126 . ? 3_665 ? 28 AC2 26 HOH D . ? HOH X 2140 . ? 1_555 ? 29 AC2 26 HOH D . ? HOH X 2172 . ? 3_665 ? 30 AC2 26 HOH D . ? HOH X 2176 . ? 1_555 ? 31 AC2 26 HOH D . ? HOH X 2179 . ? 1_555 ? 32 AC2 26 HOH D . ? HOH X 2196 . ? 1_555 ? # _database_PDB_matrix.entry_id 2CLD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CLD _atom_sites.fract_transf_matrix[1][1] 0.014407 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014407 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028769 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET X . n A 1 2 THR 2 2 2 THR THR X . n A 1 3 GLU 3 3 3 GLU GLU X . n A 1 4 TYR 4 4 4 TYR TYR X . n A 1 5 LYS 5 5 5 LYS LYS X . n A 1 6 LEU 6 6 6 LEU LEU X . n A 1 7 VAL 7 7 7 VAL VAL X . n A 1 8 VAL 8 8 8 VAL VAL X . n A 1 9 VAL 9 9 9 VAL VAL X . n A 1 10 GLY 10 10 10 GLY GLY X . n A 1 11 ALA 11 11 11 ALA ALA X . n A 1 12 GLY 12 12 12 GLY GLY X . n A 1 13 GLY 13 13 13 GLY GLY X . n A 1 14 VAL 14 14 14 VAL VAL X . n A 1 15 GLY 15 15 15 GLY GLY X . n A 1 16 LYS 16 16 16 LYS LYS X . n A 1 17 SER 17 17 17 SER SER X . n A 1 18 ALA 18 18 18 ALA ALA X . n A 1 19 LEU 19 19 19 LEU LEU X . n A 1 20 THR 20 20 20 THR THR X . n A 1 21 ILE 21 21 21 ILE ILE X . n A 1 22 GLN 22 22 22 GLN GLN X . n A 1 23 LEU 23 23 23 LEU LEU X . n A 1 24 ILE 24 24 24 ILE ILE X . n A 1 25 GLN 25 25 25 GLN GLN X . n A 1 26 ASN 26 26 26 ASN ASN X . n A 1 27 HIS 27 27 27 HIS HIS X . n A 1 28 PHE 28 28 28 PHE PHE X . n A 1 29 VAL 29 29 29 VAL VAL X . n A 1 30 ASP 30 30 ? ? ? X . n A 1 31 GLU 31 31 ? ? ? X . n A 1 32 TYR 32 32 ? ? ? X . n A 1 33 ASP 33 33 33 ASP ASP X . n A 1 34 PRO 34 34 34 PRO PRO X . n A 1 35 THR 35 35 35 THR THR X . n A 1 36 ILE 36 36 36 ILE ILE X . n A 1 37 GLU 37 37 37 GLU GLU X . n A 1 38 ASP 38 38 38 ASP ASP X . n A 1 39 SER 39 39 39 SER SER X . n A 1 40 TYR 40 40 40 TYR TYR X . n A 1 41 ARG 41 41 41 ARG ARG X . n A 1 42 LYS 42 42 42 LYS LYS X . n A 1 43 GLN 43 43 43 GLN GLN X . n A 1 44 VAL 44 44 44 VAL VAL X . n A 1 45 VAL 45 45 45 VAL VAL X . n A 1 46 ILE 46 46 46 ILE ILE X . n A 1 47 ASP 47 47 47 ASP ASP X . n A 1 48 GLY 48 48 48 GLY GLY X . n A 1 49 GLU 49 49 49 GLU GLU X . n A 1 50 THR 50 50 50 THR THR X . n A 1 51 CYS 51 51 51 CYS CYS X . n A 1 52 LEU 52 52 52 LEU LEU X . n A 1 53 LEU 53 53 53 LEU LEU X . n A 1 54 ASP 54 54 54 ASP ASP X . n A 1 55 ILE 55 55 55 ILE ILE X . n A 1 56 LEU 56 56 56 LEU LEU X . n A 1 57 ASP 57 57 57 ASP ASP X . n A 1 58 THR 58 58 58 THR THR X . n A 1 59 ALA 59 59 59 ALA ALA X . n A 1 60 GLY 60 60 60 GLY GLY X . n A 1 61 GLN 61 61 61 GLN GLN X . n A 1 62 GLU 62 62 62 GLU GLU X . n A 1 63 GLU 63 63 63 GLU GLU X . n A 1 64 TYR 64 64 64 TYR TYR X . n A 1 65 SER 65 65 65 SER SER X . n A 1 66 ALA 66 66 66 ALA ALA X . n A 1 67 MET 67 67 67 MET MET X . n A 1 68 ARG 68 68 68 ARG ARG X . n A 1 69 ASP 69 69 69 ASP ASP X . n A 1 70 GLN 70 70 70 GLN GLN X . n A 1 71 TYR 71 71 71 TYR TYR X . n A 1 72 MET 72 72 72 MET MET X . n A 1 73 ARG 73 73 73 ARG ARG X . n A 1 74 THR 74 74 74 THR THR X . n A 1 75 GLY 75 75 75 GLY GLY X . n A 1 76 GLU 76 76 76 GLU GLU X . n A 1 77 GLY 77 77 77 GLY GLY X . n A 1 78 PHE 78 78 78 PHE PHE X . n A 1 79 LEU 79 79 79 LEU LEU X . n A 1 80 CYS 80 80 80 CYS CYS X . n A 1 81 VAL 81 81 81 VAL VAL X . n A 1 82 PHE 82 82 82 PHE PHE X . n A 1 83 ALA 83 83 83 ALA ALA X . n A 1 84 ILE 84 84 84 ILE ILE X . n A 1 85 ASN 85 85 85 ASN ASN X . n A 1 86 ASN 86 86 86 ASN ASN X . n A 1 87 THR 87 87 87 THR THR X . n A 1 88 LYS 88 88 88 LYS LYS X . n A 1 89 SER 89 89 89 SER SER X . n A 1 90 PHE 90 90 90 PHE PHE X . n A 1 91 GLU 91 91 91 GLU GLU X . n A 1 92 ASP 92 92 92 ASP ASP X . n A 1 93 ILE 93 93 93 ILE ILE X . n A 1 94 HIS 94 94 94 HIS HIS X . n A 1 95 GLN 95 95 95 GLN GLN X . n A 1 96 TYR 96 96 96 TYR TYR X . n A 1 97 ARG 97 97 97 ARG ARG X . n A 1 98 GLU 98 98 98 GLU GLU X . n A 1 99 GLN 99 99 99 GLN GLN X . n A 1 100 ILE 100 100 100 ILE ILE X . n A 1 101 LYS 101 101 101 LYS LYS X . n A 1 102 ARG 102 102 102 ARG ARG X . n A 1 103 VAL 103 103 103 VAL VAL X . n A 1 104 LYS 104 104 104 LYS LYS X . n A 1 105 ASP 105 105 105 ASP ASP X . n A 1 106 SER 106 106 106 SER SER X . n A 1 107 ASP 107 107 107 ASP ASP X . n A 1 108 ASP 108 108 108 ASP ASP X . n A 1 109 VAL 109 109 109 VAL VAL X . n A 1 110 PRO 110 110 110 PRO PRO X . n A 1 111 MET 111 111 111 MET MET X . n A 1 112 VAL 112 112 112 VAL VAL X . n A 1 113 LEU 113 113 113 LEU LEU X . n A 1 114 VAL 114 114 114 VAL VAL X . n A 1 115 GLY 115 115 115 GLY GLY X . n A 1 116 ASN 116 116 116 ASN ASN X . n A 1 117 LYS 117 117 117 LYS LYS X . n A 1 118 SER 118 118 118 SER SER X . n A 1 119 ASP 119 119 119 ASP ASP X . n A 1 120 LEU 120 120 120 LEU LEU X . n A 1 121 ALA 121 121 121 ALA ALA X . n A 1 122 ALA 122 122 122 ALA ALA X . n A 1 123 ARG 123 123 123 ARG ARG X . n A 1 124 THR 124 124 124 THR THR X . n A 1 125 VAL 125 125 125 VAL VAL X . n A 1 126 GLU 126 126 126 GLU GLU X . n A 1 127 SER 127 127 127 SER SER X . n A 1 128 ARG 128 128 128 ARG ARG X . n A 1 129 GLN 129 129 129 GLN GLN X . n A 1 130 ALA 130 130 130 ALA ALA X . n A 1 131 GLN 131 131 131 GLN GLN X . n A 1 132 ASP 132 132 132 ASP ASP X . n A 1 133 LEU 133 133 133 LEU LEU X . n A 1 134 ALA 134 134 134 ALA ALA X . n A 1 135 ARG 135 135 135 ARG ARG X . n A 1 136 SER 136 136 136 SER SER X . n A 1 137 TYR 137 137 137 TYR TYR X . n A 1 138 GLY 138 138 138 GLY GLY X . n A 1 139 ILE 139 139 139 ILE ILE X . n A 1 140 PRO 140 140 140 PRO PRO X . n A 1 141 TYR 141 141 141 TYR TYR X . n A 1 142 ILE 142 142 142 ILE ILE X . n A 1 143 GLU 143 143 143 GLU GLU X . n A 1 144 THR 144 144 144 THR THR X . n A 1 145 SER 145 145 145 SER SER X . n A 1 146 ALA 146 146 146 ALA ALA X . n A 1 147 LYS 147 147 147 LYS LYS X . n A 1 148 THR 148 148 148 THR THR X . n A 1 149 ARG 149 149 149 ARG ARG X . n A 1 150 GLN 150 150 150 GLN GLN X . n A 1 151 GLY 151 151 151 GLY GLY X . n A 1 152 VAL 152 152 152 VAL VAL X . n A 1 153 GLU 153 153 153 GLU GLU X . n A 1 154 ASP 154 154 154 ASP ASP X . n A 1 155 ALA 155 155 155 ALA ALA X . n A 1 156 PHE 156 156 156 PHE PHE X . n A 1 157 TYR 157 157 157 TYR TYR X . n A 1 158 THR 158 158 158 THR THR X . n A 1 159 LEU 159 159 159 LEU LEU X . n A 1 160 VAL 160 160 160 VAL VAL X . n A 1 161 ARG 161 161 161 ARG ARG X . n A 1 162 GLU 162 162 162 GLU GLU X . n A 1 163 ILE 163 163 163 ILE ILE X . n A 1 164 ARG 164 164 164 ARG ARG X . n A 1 165 GLN 165 165 165 GLN GLN X . n A 1 166 HIS 166 166 166 HIS HIS X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 168 168 MG MG X . C 3 GDP 1 180 180 GDP GDP X . D 4 HOH 1 2001 2001 HOH HOH X . D 4 HOH 2 2002 2002 HOH HOH X . D 4 HOH 3 2003 2003 HOH HOH X . D 4 HOH 4 2004 2004 HOH HOH X . D 4 HOH 5 2005 2005 HOH HOH X . D 4 HOH 6 2006 2006 HOH HOH X . D 4 HOH 7 2007 2007 HOH HOH X . D 4 HOH 8 2008 2008 HOH HOH X . D 4 HOH 9 2009 2009 HOH HOH X . D 4 HOH 10 2010 2010 HOH HOH X . D 4 HOH 11 2011 2011 HOH HOH X . D 4 HOH 12 2012 2012 HOH HOH X . D 4 HOH 13 2013 2013 HOH HOH X . D 4 HOH 14 2014 2014 HOH HOH X . D 4 HOH 15 2015 2015 HOH HOH X . D 4 HOH 16 2016 2016 HOH HOH X . D 4 HOH 17 2017 2017 HOH HOH X . D 4 HOH 18 2018 2018 HOH HOH X . D 4 HOH 19 2019 2019 HOH HOH X . D 4 HOH 20 2020 2020 HOH HOH X . D 4 HOH 21 2021 2021 HOH HOH X . D 4 HOH 22 2022 2022 HOH HOH X . D 4 HOH 23 2023 2023 HOH HOH X . D 4 HOH 24 2024 2024 HOH HOH X . D 4 HOH 25 2025 2025 HOH HOH X . D 4 HOH 26 2026 2026 HOH HOH X . D 4 HOH 27 2027 2027 HOH HOH X . D 4 HOH 28 2028 2028 HOH HOH X . D 4 HOH 29 2029 2029 HOH HOH X . D 4 HOH 30 2030 2030 HOH HOH X . D 4 HOH 31 2031 2031 HOH HOH X . D 4 HOH 32 2032 2032 HOH HOH X . D 4 HOH 33 2033 2033 HOH HOH X . D 4 HOH 34 2034 2034 HOH HOH X . D 4 HOH 35 2035 2035 HOH HOH X . D 4 HOH 36 2036 2036 HOH HOH X . D 4 HOH 37 2037 2037 HOH HOH X . D 4 HOH 38 2038 2038 HOH HOH X . D 4 HOH 39 2039 2039 HOH HOH X . D 4 HOH 40 2040 2040 HOH HOH X . D 4 HOH 41 2041 2041 HOH HOH X . D 4 HOH 42 2042 2042 HOH HOH X . D 4 HOH 43 2043 2043 HOH HOH X . D 4 HOH 44 2044 2044 HOH HOH X . D 4 HOH 45 2045 2045 HOH HOH X . D 4 HOH 46 2046 2046 HOH HOH X . D 4 HOH 47 2047 2047 HOH HOH X . D 4 HOH 48 2048 2048 HOH HOH X . D 4 HOH 49 2049 2049 HOH HOH X . D 4 HOH 50 2050 2050 HOH HOH X . D 4 HOH 51 2051 2051 HOH HOH X . D 4 HOH 52 2052 2052 HOH HOH X . D 4 HOH 53 2053 2053 HOH HOH X . D 4 HOH 54 2054 2054 HOH HOH X . D 4 HOH 55 2055 2055 HOH HOH X . D 4 HOH 56 2056 2056 HOH HOH X . D 4 HOH 57 2057 2057 HOH HOH X . D 4 HOH 58 2058 2058 HOH HOH X . D 4 HOH 59 2059 2059 HOH HOH X . D 4 HOH 60 2060 2060 HOH HOH X . D 4 HOH 61 2061 2061 HOH HOH X . D 4 HOH 62 2062 2062 HOH HOH X . D 4 HOH 63 2063 2063 HOH HOH X . D 4 HOH 64 2064 2064 HOH HOH X . D 4 HOH 65 2065 2065 HOH HOH X . D 4 HOH 66 2066 2066 HOH HOH X . D 4 HOH 67 2067 2067 HOH HOH X . D 4 HOH 68 2068 2068 HOH HOH X . D 4 HOH 69 2069 2069 HOH HOH X . D 4 HOH 70 2070 2070 HOH HOH X . D 4 HOH 71 2071 2071 HOH HOH X . D 4 HOH 72 2072 2072 HOH HOH X . D 4 HOH 73 2073 2073 HOH HOH X . D 4 HOH 74 2074 2074 HOH HOH X . D 4 HOH 75 2075 2075 HOH HOH X . D 4 HOH 76 2076 2076 HOH HOH X . D 4 HOH 77 2077 2077 HOH HOH X . D 4 HOH 78 2078 2078 HOH HOH X . D 4 HOH 79 2079 2079 HOH HOH X . D 4 HOH 80 2080 2080 HOH HOH X . D 4 HOH 81 2081 2081 HOH HOH X . D 4 HOH 82 2082 2082 HOH HOH X . D 4 HOH 83 2083 2083 HOH HOH X . D 4 HOH 84 2084 2084 HOH HOH X . D 4 HOH 85 2085 2085 HOH HOH X . D 4 HOH 86 2086 2086 HOH HOH X . D 4 HOH 87 2087 2087 HOH HOH X . D 4 HOH 88 2088 2088 HOH HOH X . D 4 HOH 89 2089 2089 HOH HOH X . D 4 HOH 90 2090 2090 HOH HOH X . D 4 HOH 91 2091 2091 HOH HOH X . D 4 HOH 92 2092 2092 HOH HOH X . D 4 HOH 93 2093 2093 HOH HOH X . D 4 HOH 94 2094 2094 HOH HOH X . D 4 HOH 95 2095 2095 HOH HOH X . D 4 HOH 96 2096 2096 HOH HOH X . D 4 HOH 97 2097 2097 HOH HOH X . D 4 HOH 98 2098 2098 HOH HOH X . D 4 HOH 99 2099 2099 HOH HOH X . D 4 HOH 100 2100 2100 HOH HOH X . D 4 HOH 101 2101 2101 HOH HOH X . D 4 HOH 102 2102 2102 HOH HOH X . D 4 HOH 103 2103 2103 HOH HOH X . D 4 HOH 104 2104 2104 HOH HOH X . D 4 HOH 105 2105 2105 HOH HOH X . D 4 HOH 106 2106 2106 HOH HOH X . D 4 HOH 107 2107 2107 HOH HOH X . D 4 HOH 108 2108 2108 HOH HOH X . D 4 HOH 109 2109 2109 HOH HOH X . D 4 HOH 110 2110 2110 HOH HOH X . D 4 HOH 111 2111 2111 HOH HOH X . D 4 HOH 112 2112 2112 HOH HOH X . D 4 HOH 113 2113 2113 HOH HOH X . D 4 HOH 114 2114 2114 HOH HOH X . D 4 HOH 115 2115 2115 HOH HOH X . D 4 HOH 116 2116 2116 HOH HOH X . D 4 HOH 117 2117 2117 HOH HOH X . D 4 HOH 118 2118 2118 HOH HOH X . D 4 HOH 119 2119 2119 HOH HOH X . D 4 HOH 120 2120 2120 HOH HOH X . D 4 HOH 121 2121 2121 HOH HOH X . D 4 HOH 122 2122 2122 HOH HOH X . D 4 HOH 123 2123 2123 HOH HOH X . D 4 HOH 124 2124 2124 HOH HOH X . D 4 HOH 125 2125 2125 HOH HOH X . D 4 HOH 126 2126 2126 HOH HOH X . D 4 HOH 127 2127 2127 HOH HOH X . D 4 HOH 128 2128 2128 HOH HOH X . D 4 HOH 129 2129 2129 HOH HOH X . D 4 HOH 130 2130 2130 HOH HOH X . D 4 HOH 131 2131 2131 HOH HOH X . D 4 HOH 132 2132 2132 HOH HOH X . D 4 HOH 133 2133 2133 HOH HOH X . D 4 HOH 134 2134 2134 HOH HOH X . D 4 HOH 135 2135 2135 HOH HOH X . D 4 HOH 136 2136 2136 HOH HOH X . D 4 HOH 137 2137 2137 HOH HOH X . D 4 HOH 138 2138 2138 HOH HOH X . D 4 HOH 139 2139 2139 HOH HOH X . D 4 HOH 140 2140 2140 HOH HOH X . D 4 HOH 141 2141 2141 HOH HOH X . D 4 HOH 142 2142 2142 HOH HOH X . D 4 HOH 143 2143 2143 HOH HOH X . D 4 HOH 144 2144 2144 HOH HOH X . D 4 HOH 145 2145 2145 HOH HOH X . D 4 HOH 146 2146 2146 HOH HOH X . D 4 HOH 147 2147 2147 HOH HOH X . D 4 HOH 148 2148 2148 HOH HOH X . D 4 HOH 149 2149 2149 HOH HOH X . D 4 HOH 150 2150 2150 HOH HOH X . D 4 HOH 151 2151 2151 HOH HOH X . D 4 HOH 152 2152 2152 HOH HOH X . D 4 HOH 153 2153 2153 HOH HOH X . D 4 HOH 154 2154 2154 HOH HOH X . D 4 HOH 155 2155 2155 HOH HOH X . D 4 HOH 156 2156 2156 HOH HOH X . D 4 HOH 157 2157 2157 HOH HOH X . D 4 HOH 158 2158 2158 HOH HOH X . D 4 HOH 159 2159 2159 HOH HOH X . D 4 HOH 160 2160 2160 HOH HOH X . D 4 HOH 161 2161 2161 HOH HOH X . D 4 HOH 162 2162 2162 HOH HOH X . D 4 HOH 163 2163 2163 HOH HOH X . D 4 HOH 164 2164 2164 HOH HOH X . D 4 HOH 165 2165 2165 HOH HOH X . D 4 HOH 166 2166 2166 HOH HOH X . D 4 HOH 167 2167 2167 HOH HOH X . D 4 HOH 168 2168 2168 HOH HOH X . D 4 HOH 169 2169 2169 HOH HOH X . D 4 HOH 170 2170 2170 HOH HOH X . D 4 HOH 171 2171 2171 HOH HOH X . D 4 HOH 172 2172 2172 HOH HOH X . D 4 HOH 173 2173 2173 HOH HOH X . D 4 HOH 174 2174 2174 HOH HOH X . D 4 HOH 175 2175 2175 HOH HOH X . D 4 HOH 176 2176 2176 HOH HOH X . D 4 HOH 177 2177 2177 HOH HOH X . D 4 HOH 178 2178 2178 HOH HOH X . D 4 HOH 179 2179 2179 HOH HOH X . D 4 HOH 180 2180 2180 HOH HOH X . D 4 HOH 181 2181 2181 HOH HOH X . D 4 HOH 182 2182 2182 HOH HOH X . D 4 HOH 183 2183 2183 HOH HOH X . D 4 HOH 184 2184 2184 HOH HOH X . D 4 HOH 185 2185 2185 HOH HOH X . D 4 HOH 186 2186 2186 HOH HOH X . D 4 HOH 187 2187 2187 HOH HOH X . D 4 HOH 188 2188 2188 HOH HOH X . D 4 HOH 189 2189 2189 HOH HOH X . D 4 HOH 190 2190 2190 HOH HOH X . D 4 HOH 191 2191 2191 HOH HOH X . D 4 HOH 192 2192 2192 HOH HOH X . D 4 HOH 193 2193 2193 HOH HOH X . D 4 HOH 194 2194 2194 HOH HOH X . D 4 HOH 195 2195 2195 HOH HOH X . D 4 HOH 196 2196 2196 HOH HOH X . D 4 HOH 197 2197 2197 HOH HOH X . D 4 HOH 198 2198 2198 HOH HOH X . D 4 HOH 199 2199 2199 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OG _pdbx_struct_conn_angle.ptnr1_label_alt_id A _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id SER _pdbx_struct_conn_angle.ptnr1_label_seq_id 17 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id X _pdbx_struct_conn_angle.ptnr1_auth_comp_id SER _pdbx_struct_conn_angle.ptnr1_auth_seq_id 17 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id A _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id X _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 168 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O2B _pdbx_struct_conn_angle.ptnr3_label_alt_id A _pdbx_struct_conn_angle.ptnr3_label_asym_id C _pdbx_struct_conn_angle.ptnr3_label_comp_id GDP _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id X _pdbx_struct_conn_angle.ptnr3_auth_comp_id GDP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 180 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 79.6 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2015-04-22 4 'Structure model' 1 3 2019-01-30 5 'Structure model' 1 4 2019-02-06 6 'Structure model' 1 5 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' Other 7 3 'Structure model' 'Refinement description' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Experimental preparation' 10 4 'Structure model' Other 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Experimental preparation' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Database references' 15 6 'Structure model' 'Derived calculations' 16 6 'Structure model' Other 17 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 4 'Structure model' pdbx_database_proc 3 4 'Structure model' pdbx_database_status 4 5 'Structure model' exptl_crystal_grow 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_database_status 9 6 'Structure model' pdbx_initial_refinement_model 10 6 'Structure model' struct_conn 11 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.method' 2 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 5 'Structure model' '_exptl_crystal_grow.temp' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' 6 6 'Structure model' '_pdbx_database_status.status_code_sf' 7 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 20 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 21 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 18.9480 55.3590 -2.2740 0.0014 -0.0068 -0.0444 0.0047 -0.0343 0.0144 2.1739 1.6661 0.6400 -0.7759 -0.2824 -0.0331 0.0555 0.1177 0.0959 -0.0813 -0.0319 -0.1041 -0.0038 -0.0184 -0.0235 'X-RAY DIFFRACTION' 2 ? refined 21.2240 68.1610 -2.1350 0.0214 -0.0485 0.0530 0.0064 0.0184 0.0402 1.8491 4.5394 9.8508 1.2948 -0.1199 3.5619 0.0083 0.1514 0.5253 -0.3965 0.1338 -0.3191 -0.5359 0.0470 -0.1420 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 X 1 ? ? X 166 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 X 168 ? ? X 168 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 X 180 ? ? X 180 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.2.0005 ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? MOLREP phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2CLD _pdbx_entry_details.compound_details ;RAS PROTEINS BIND GDP/GTP AND POSSESS INTRINSIC GTPASE ACTIVITY ENGINEERED RESIDUE IN CHAIN X, TYR 32 TO CYS ENGINEERED RESIDUE IN CHAIN X, CYS 118 TO SER ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA X 59 ? A -164.45 -159.18 2 1 GLN X 61 ? A 111.81 141.98 3 1 GLU X 62 ? A -30.81 -71.81 4 1 GLU X 63 ? A 164.59 175.68 5 1 TYR X 64 ? A 70.62 43.98 6 1 LYS X 117 ? A 70.85 37.24 7 1 ARG X 149 ? A 76.97 -1.86 8 2 GLN X 61 ? B -113.60 -153.55 9 2 GLU X 63 ? B 40.80 -145.69 10 2 TYR X 64 ? B -51.08 103.24 11 2 LYS X 117 ? B 76.79 38.42 12 2 ARG X 149 ? B 78.30 -3.74 13 2 VAL X 152 ? B -60.38 -77.17 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 2 _pdbx_validate_peptide_omega.auth_comp_id_1 THR _pdbx_validate_peptide_omega.auth_asym_id_1 X _pdbx_validate_peptide_omega.auth_seq_id_1 144 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 B _pdbx_validate_peptide_omega.auth_comp_id_2 SER _pdbx_validate_peptide_omega.auth_asym_id_2 X _pdbx_validate_peptide_omega.auth_seq_id_2 145 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 B _pdbx_validate_peptide_omega.omega 145.92 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O A X HOH 2149 ? 7.89 . 2 1 O A X HOH 2164 ? 6.77 . 3 2 O B X HOH 2149 ? 8.57 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X ASP 30 ? A ASP 30 2 1 Y 1 X GLU 31 ? A GLU 31 3 1 Y 1 X TYR 32 ? A TYR 32 4 2 Y 1 X ASP 30 ? A ASP 30 5 2 Y 1 X GLU 31 ? A GLU 31 6 2 Y 1 X TYR 32 ? A TYR 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TYR N N N N 365 TYR CA C N S 366 TYR C C N N 367 TYR O O N N 368 TYR CB C N N 369 TYR CG C Y N 370 TYR CD1 C Y N 371 TYR CD2 C Y N 372 TYR CE1 C Y N 373 TYR CE2 C Y N 374 TYR CZ C Y N 375 TYR OH O N N 376 TYR OXT O N N 377 TYR H H N N 378 TYR H2 H N N 379 TYR HA H N N 380 TYR HB2 H N N 381 TYR HB3 H N N 382 TYR HD1 H N N 383 TYR HD2 H N N 384 TYR HE1 H N N 385 TYR HE2 H N N 386 TYR HH H N N 387 TYR HXT H N N 388 VAL N N N N 389 VAL CA C N S 390 VAL C C N N 391 VAL O O N N 392 VAL CB C N N 393 VAL CG1 C N N 394 VAL CG2 C N N 395 VAL OXT O N N 396 VAL H H N N 397 VAL H2 H N N 398 VAL HA H N N 399 VAL HB H N N 400 VAL HG11 H N N 401 VAL HG12 H N N 402 VAL HG13 H N N 403 VAL HG21 H N N 404 VAL HG22 H N N 405 VAL HG23 H N N 406 VAL HXT H N N 407 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TYR N CA sing N N 351 TYR N H sing N N 352 TYR N H2 sing N N 353 TYR CA C sing N N 354 TYR CA CB sing N N 355 TYR CA HA sing N N 356 TYR C O doub N N 357 TYR C OXT sing N N 358 TYR CB CG sing N N 359 TYR CB HB2 sing N N 360 TYR CB HB3 sing N N 361 TYR CG CD1 doub Y N 362 TYR CG CD2 sing Y N 363 TYR CD1 CE1 sing Y N 364 TYR CD1 HD1 sing N N 365 TYR CD2 CE2 doub Y N 366 TYR CD2 HD2 sing N N 367 TYR CE1 CZ doub Y N 368 TYR CE1 HE1 sing N N 369 TYR CE2 CZ sing Y N 370 TYR CE2 HE2 sing N N 371 TYR CZ OH sing N N 372 TYR OH HH sing N N 373 TYR OXT HXT sing N N 374 VAL N CA sing N N 375 VAL N H sing N N 376 VAL N H2 sing N N 377 VAL CA C sing N N 378 VAL CA CB sing N N 379 VAL CA HA sing N N 380 VAL C O doub N N 381 VAL C OXT sing N N 382 VAL CB CG1 sing N N 383 VAL CB CG2 sing N N 384 VAL CB HB sing N N 385 VAL CG1 HG11 sing N N 386 VAL CG1 HG12 sing N N 387 VAL CG1 HG13 sing N N 388 VAL CG2 HG21 sing N N 389 VAL CG2 HG22 sing N N 390 VAL CG2 HG23 sing N N 391 VAL OXT HXT sing N N 392 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4Q21 _pdbx_initial_refinement_model.details 'PDB ENTRY 4Q21' #