HEADER HYDROLASE 17-MAY-06 2CN1 TITLE CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC 5'-NUCLEOTIDASE III (NT5C3) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOSOLIC 5'-NUCLEOTIDASE III; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CN-III, PYRIMIDINE 5'-NUCLEOTIDASE 1, P5'N-1, P5N-1, PN-I, COMPND 5 URIDINE 5'-MONOPHOSPHATE HYDROLASE 1, P36; COMPND 6 EC: 3.1.3.5; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P28A-LIC KEYWDS NUCLEOTIDE-BINDING, UMPH1, 5-PRIME, HYDROLASE, NUCLEOTIDASE EXPDTA X-RAY DIFFRACTION AUTHOR K.WALLDEN,P.STENMARK,C.ARROWSMITH,H.BERGLUND,R.COLLINS,A.EDWARDS, AUTHOR 2 M.EHN,S.FLODIN,A.FLORES,S.GRASLUND,M.HAMMARSTROM,B.M.HALLBERG, AUTHOR 3 L.HOLMBERG SCHIAVONE,M.HOGBOM,T.KOTENYOVA,A.MAGNUSDOTTIR,P.NILSSON- AUTHOR 4 EHLE,T.NYMAN,D.OGG,C.PERSSON,J.SAGEMARK,M.SUNDSTROM,A.G.THORSELL, AUTHOR 5 J.UPPENBERG,S.VAN DEN BERG,J.WEIGELT,M.WELIN,P.NORDLUND REVDAT 4 13-DEC-23 2CN1 1 TITLE REVDAT 3 13-JUL-11 2CN1 1 VERSN REVDAT 2 24-FEB-09 2CN1 1 VERSN REVDAT 1 12-JUN-06 2CN1 0 JRNL AUTH K.WALLDEN,P.STENMARK,T.NYMAN,S.FLODIN,S.GRASLUND,P.LOPPNAU, JRNL AUTH 2 V.BIANCHI,P.NORDLUND JRNL TITL CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC 5'-NUCLEOTIDASE II: JRNL TITL 2 INSIGHTS INTO ALLOSTERIC REGULATION AND SUBSTRATE JRNL TITL 3 RECOGNITION. JRNL REF J.BIOL.CHEM. V. 282 17828 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17405878 JRNL DOI 10.1074/JBC.M700917200 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9346 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 470 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 684 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.20000 REMARK 3 B22 (A**2) : 0.93000 REMARK 3 B33 (A**2) : -2.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.096 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.353 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.241 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.294 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2226 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3003 ; 1.610 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 272 ; 5.652 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;39.506 ;25.566 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 421 ;17.923 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;24.122 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 340 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1649 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 948 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1513 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 69 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.148 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1382 ; 0.760 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2193 ; 1.320 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 930 ; 2.114 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 810 ; 3.345 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 20 REMARK 3 ORIGIN FOR THE GROUP (A): 27.8660 10.3740 40.6830 REMARK 3 T TENSOR REMARK 3 T11: 0.3867 T22: 0.4133 REMARK 3 T33: 0.0479 T12: 0.0022 REMARK 3 T13: -0.1281 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 50.6543 L22: 36.6541 REMARK 3 L33: 20.3170 L12: 26.7021 REMARK 3 L13: -11.3897 L23: -13.6433 REMARK 3 S TENSOR REMARK 3 S11: 0.4788 S12: -2.5316 S13: 0.0484 REMARK 3 S21: 2.1163 S22: -0.8692 S23: -0.5732 REMARK 3 S31: -1.1174 S32: 0.8183 S33: 0.3904 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 42 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7710 8.0750 26.6780 REMARK 3 T TENSOR REMARK 3 T11: 0.2579 T22: 0.2906 REMARK 3 T33: 0.1831 T12: -0.0271 REMARK 3 T13: 0.0148 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 2.2242 L22: 0.8061 REMARK 3 L33: 1.8335 L12: -1.1298 REMARK 3 L13: 0.6514 L23: 0.2867 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0604 S13: -0.1446 REMARK 3 S21: 0.1658 S22: 0.2076 S23: 0.1629 REMARK 3 S31: -0.1491 S32: -0.0717 S33: -0.2099 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): 36.0520 13.9350 3.8930 REMARK 3 T TENSOR REMARK 3 T11: 0.2705 T22: 0.3511 REMARK 3 T33: 0.1676 T12: -0.0100 REMARK 3 T13: -0.0053 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.4067 L22: 0.5377 REMARK 3 L33: 2.4789 L12: 0.2729 REMARK 3 L13: -0.2715 L23: -0.1103 REMARK 3 S TENSOR REMARK 3 S11: 0.0685 S12: 0.0081 S13: 0.1753 REMARK 3 S21: -0.2071 S22: 0.0961 S23: -0.0180 REMARK 3 S31: 0.2356 S32: -0.1890 S33: -0.1646 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): 37.9840 28.0020 4.4820 REMARK 3 T TENSOR REMARK 3 T11: 0.1433 T22: 0.5044 REMARK 3 T33: 0.2389 T12: 0.0141 REMARK 3 T13: -0.0218 T23: 0.1128 REMARK 3 L TENSOR REMARK 3 L11: 0.9535 L22: 3.7444 REMARK 3 L33: 9.6307 L12: -0.7460 REMARK 3 L13: 1.3604 L23: 3.8656 REMARK 3 S TENSOR REMARK 3 S11: -0.1040 S12: 0.4686 S13: 0.2842 REMARK 3 S21: 0.1601 S22: 0.4225 S23: -0.3550 REMARK 3 S31: -0.1801 S32: 1.3581 S33: -0.3185 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 28.9890 28.1760 6.1140 REMARK 3 T TENSOR REMARK 3 T11: 0.2500 T22: 0.3905 REMARK 3 T33: 0.1955 T12: 0.0174 REMARK 3 T13: 0.0069 T23: 0.0664 REMARK 3 L TENSOR REMARK 3 L11: 0.5697 L22: 3.4575 REMARK 3 L33: 2.8951 L12: 0.3004 REMARK 3 L13: 0.7590 L23: 2.6742 REMARK 3 S TENSOR REMARK 3 S11: -0.0543 S12: 0.0999 S13: 0.2579 REMARK 3 S21: 0.4121 S22: 0.0163 S23: 0.3458 REMARK 3 S31: 0.3138 S32: -0.1298 S33: 0.0379 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8320 9.6370 8.2410 REMARK 3 T TENSOR REMARK 3 T11: 0.2505 T22: 0.3576 REMARK 3 T33: 0.1312 T12: -0.0190 REMARK 3 T13: -0.0716 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.7112 L22: 1.4739 REMARK 3 L33: 2.9225 L12: 0.7240 REMARK 3 L13: -0.6936 L23: -1.2689 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: 0.3056 S13: -0.0207 REMARK 3 S21: -0.2233 S22: 0.0910 S23: 0.1647 REMARK 3 S31: 0.3040 S32: -0.2941 S33: -0.0520 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 197 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2800 22.5400 18.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.1972 T22: 0.3278 REMARK 3 T33: 0.2762 T12: 0.1348 REMARK 3 T13: 0.0470 T23: 0.0682 REMARK 3 L TENSOR REMARK 3 L11: 3.1759 L22: 8.4608 REMARK 3 L33: 3.7681 L12: 4.8883 REMARK 3 L13: -3.0734 L23: -3.8681 REMARK 3 S TENSOR REMARK 3 S11: 0.3146 S12: 0.4570 S13: 0.3046 REMARK 3 S21: 0.0492 S22: 0.0132 S23: 0.6106 REMARK 3 S31: -0.4421 S32: -0.4087 S33: -0.3278 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 215 A 245 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0730 15.1760 27.0890 REMARK 3 T TENSOR REMARK 3 T11: 0.2069 T22: 0.3365 REMARK 3 T33: 0.1679 T12: 0.0047 REMARK 3 T13: 0.0198 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 4.5642 L22: 3.9060 REMARK 3 L33: 1.4070 L12: 0.2174 REMARK 3 L13: -1.3481 L23: -0.2468 REMARK 3 S TENSOR REMARK 3 S11: 0.1189 S12: 0.0203 S13: 0.1230 REMARK 3 S21: 0.2496 S22: 0.0542 S23: 0.2714 REMARK 3 S31: -0.1970 S32: -0.1076 S33: -0.1730 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 246 A 265 REMARK 3 ORIGIN FOR THE GROUP (A): 35.8820 18.9410 26.5310 REMARK 3 T TENSOR REMARK 3 T11: 0.2861 T22: 0.3664 REMARK 3 T33: 0.1266 T12: -0.0294 REMARK 3 T13: -0.0349 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 8.0455 L22: 2.0584 REMARK 3 L33: 1.5426 L12: 1.4733 REMARK 3 L13: -3.1918 L23: -1.2875 REMARK 3 S TENSOR REMARK 3 S11: 0.3256 S12: -0.4969 S13: -0.0299 REMARK 3 S21: 0.2210 S22: -0.2182 S23: -0.1435 REMARK 3 S31: -0.2572 S32: 0.1600 S33: -0.1075 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 266 A 286 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2130 4.7530 26.5770 REMARK 3 T TENSOR REMARK 3 T11: 0.2858 T22: 0.3808 REMARK 3 T33: 0.1306 T12: 0.0151 REMARK 3 T13: -0.0074 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 2.4254 L22: 0.1724 REMARK 3 L33: 1.7392 L12: -0.4522 REMARK 3 L13: -0.6733 L23: 0.4892 REMARK 3 S TENSOR REMARK 3 S11: -0.2650 S12: -0.1141 S13: -0.3403 REMARK 3 S21: -0.0132 S22: 0.1181 S23: -0.2288 REMARK 3 S31: 0.1972 S32: 0.0219 S33: 0.1468 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2CN1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1290028770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9395 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9828 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 76.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2BDU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG1500, 20% GLYCEROL, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.36150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.36150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.19450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.47550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.19450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.47550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.36150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.19450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.47550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.36150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.19450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.47550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 86.38900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.36150 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 GLY A 7 REMARK 465 LEU A 8 REMARK 465 VAL A 9 REMARK 465 PRO A 10 REMARK 465 ARG A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2023 O HOH A 2023 3655 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 41 CG - SD - CE ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG A 52 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 52 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 138 -70.01 -43.20 REMARK 500 ASP A 184 -162.90 -108.68 REMARK 500 SER A 264 -32.22 -137.44 REMARK 500 GLN A 271 56.61 30.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 2CN1 A 14 286 UNP Q9H0P0 5NT3_HUMAN 64 336 SEQADV 2CN1 MET A -5 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 GLY A -4 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 SER A -3 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 SER A -2 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 HIS A -1 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 HIS A 0 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 HIS A 1 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 HIS A 2 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 HIS A 3 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 HIS A 4 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 SER A 5 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 SER A 6 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 GLY A 7 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 LEU A 8 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 VAL A 9 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 PRO A 10 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 ARG A 11 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 GLY A 12 UNP Q9H0P0 EXPRESSION TAG SEQADV 2CN1 SER A 13 UNP Q9H0P0 EXPRESSION TAG SEQRES 1 A 292 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 292 LEU VAL PRO ARG GLY SER ASN PRO THR ARG VAL GLU GLU SEQRES 3 A 292 ILE ILE CYS GLY LEU ILE LYS GLY GLY ALA ALA LYS LEU SEQRES 4 A 292 GLN ILE ILE THR ASP PHE ASP MET THR LEU SER ARG PHE SEQRES 5 A 292 SER TYR LYS GLY LYS ARG CYS PRO THR CYS HIS ASN ILE SEQRES 6 A 292 ILE ASP ASN CYS LYS LEU VAL THR ASP GLU CYS ARG LYS SEQRES 7 A 292 LYS LEU LEU GLN LEU LYS GLU LYS TYR TYR ALA ILE GLU SEQRES 8 A 292 VAL ASP PRO VAL LEU THR VAL GLU GLU LYS TYR PRO TYR SEQRES 9 A 292 MET VAL GLU TRP TYR THR LYS SER HIS GLY LEU LEU VAL SEQRES 10 A 292 GLN GLN ALA LEU PRO LYS ALA LYS LEU LYS GLU ILE VAL SEQRES 11 A 292 ALA GLU SER ASP VAL MET LEU LYS GLU GLY TYR GLU ASN SEQRES 12 A 292 PHE PHE ASP LYS LEU GLN GLN HIS SER ILE PRO VAL PHE SEQRES 13 A 292 ILE PHE SER ALA GLY ILE GLY ASP VAL LEU GLU GLU VAL SEQRES 14 A 292 ILE ARG GLN ALA GLY VAL TYR HIS PRO ASN VAL LYS VAL SEQRES 15 A 292 VAL SER ASN PHE MET ASP PHE ASP GLU THR GLY VAL LEU SEQRES 16 A 292 LYS GLY PHE LYS GLY GLU LEU ILE HIS VAL PHE ASN LYS SEQRES 17 A 292 HIS ASP GLY ALA LEU ARG ASN THR GLU TYR PHE ASN GLN SEQRES 18 A 292 LEU LYS ASP ASN SER ASN ILE ILE LEU LEU GLY ASP SER SEQRES 19 A 292 GLN GLY ASP LEU ARG MET ALA ASP GLY VAL ALA ASN VAL SEQRES 20 A 292 GLU HIS ILE LEU LYS ILE GLY TYR LEU ASN ASP ARG VAL SEQRES 21 A 292 ASP GLU LEU LEU GLU LYS TYR MET ASP SER TYR ASP ILE SEQRES 22 A 292 VAL LEU VAL GLN ASP GLU SER LEU GLU VAL ALA ASN SER SEQRES 23 A 292 ILE LEU GLN LYS ILE LEU FORMUL 2 HOH *23(H2 O) HELIX 1 1 ASN A 14 GLY A 29 1 16 HELIX 2 2 THR A 55 ASN A 62 1 8 HELIX 3 3 THR A 67 VAL A 86 1 20 HELIX 4 4 THR A 91 GLN A 113 1 23 HELIX 5 5 LYS A 119 GLU A 126 1 8 HELIX 6 6 GLY A 134 GLN A 144 1 11 HELIX 7 7 GLY A 157 ALA A 167 1 11 HELIX 8 8 ASN A 201 ARG A 208 1 8 HELIX 9 9 ASN A 209 GLN A 215 1 7 HELIX 10 10 GLN A 229 MET A 234 5 6 HELIX 11 11 ARG A 253 ASP A 263 1 11 HELIX 12 12 LEU A 275 LEU A 286 1 12 SHEET 1 AA 6 VAL A 174 ASN A 179 0 SHEET 2 AA 6 VAL A 149 ILE A 156 1 O VAL A 149 N LYS A 175 SHEET 3 AA 6 LEU A 33 THR A 37 1 O ILE A 35 N PHE A 150 SHEET 4 AA 6 ASN A 221 GLY A 226 1 O ASN A 221 N GLN A 34 SHEET 5 AA 6 HIS A 243 LEU A 250 1 O HIS A 243 N ILE A 222 SHEET 6 AA 6 ILE A 267 VAL A 270 1 O ILE A 267 N GLY A 248 SHEET 1 AB 2 SER A 47 TYR A 48 0 SHEET 2 AB 2 LYS A 51 ARG A 52 -1 O LYS A 51 N TYR A 48 SHEET 1 AC 2 MET A 181 PHE A 183 0 SHEET 2 AC 2 LEU A 189 PHE A 192 -1 N LYS A 190 O ASP A 182 CRYST1 86.389 100.951 76.723 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011576 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013034 0.00000