HEADER FIBRIL PROTEIN 25-MAY-06 2CNY TITLE SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH A 19-RESIDUE SAFA NTE TITLE 2 PEPTIDE (I15A MUTANT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE OUTER MEMBRANE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CORE PILIN DOMAIN, NTE DELETED, RESIDUES 48-170; COMPND 5 SYNONYM: SAFA PILUS SUBUNIT; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PUTATIVE OUTER MEMBRANE PROTEIN; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: N-TERMINAL EXTENSION, RESIDUES 27-46; COMPND 11 SYNONYM: SAFA N-TERMINAL EXTENSION; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 602; SOURCE 4 STRAIN: LT2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C600; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PTRC99A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 12 ORGANISM_TAXID: 602 KEYWDS PILUS SUBUNIT, FIBRIL PROTEIN, FOLD COMPLEMENTATION EXPDTA X-RAY DIFFRACTION AUTHOR H.REMAUT,R.J.ROSE,T.J.HANNAN,S.J.HULTGREN,S.E.RADFORD,A.E.ASHCROFT, AUTHOR 2 G.WAKSMAN REVDAT 4 01-MAY-24 2CNY 1 REMARK REVDAT 3 13-JUL-11 2CNY 1 VERSN REVDAT 2 24-FEB-09 2CNY 1 VERSN REVDAT 1 27-JUN-06 2CNY 0 JRNL AUTH H.REMAUT,R.J.ROSE,T.J.HANNAN,S.J.HULTGREN,S.E.RADFORD, JRNL AUTH 2 A.E.ASHCROFT,G.WAKSMAN JRNL TITL DONOR-STRAND EXCHANGE IN CHAPERONE-ASSISTED PILUS ASSEMBLY JRNL TITL 2 PROCEEDS THROUGH A CONCERTED BETA-STRAND DISPLACEMENT JRNL TITL 3 MECHANISM JRNL REF MOL.CELL V. 22 831 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 16793551 JRNL DOI 10.1016/J.MOLCEL.2006.05.033 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 13903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 734 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 999 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.1940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1057 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 99 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 17.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.130 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.017 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1105 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1515 ; 1.220 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 154 ; 6.007 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 41 ;35.856 ;25.854 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 186 ;12.364 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;12.076 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 183 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 826 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 404 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 779 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 78 ; 0.115 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 742 ; 0.972 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1181 ; 1.242 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 413 ; 1.897 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 327 ; 3.209 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 19 REMARK 3 RESIDUE RANGE : A 22 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 25.3430 -12.0510 40.8760 REMARK 3 T TENSOR REMARK 3 T11: -0.0217 T22: -0.0055 REMARK 3 T33: -0.0317 T12: -0.0038 REMARK 3 T13: 0.0051 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.3958 L22: 1.1137 REMARK 3 L33: 0.4398 L12: 0.2241 REMARK 3 L13: -0.0893 L23: -0.0466 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: 0.0520 S13: -0.0376 REMARK 3 S21: -0.0305 S22: 0.0246 S23: -0.0549 REMARK 3 S31: -0.0354 S32: 0.0041 S33: -0.0064 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. SIDE CHAIN ATOMS FOR WHICH ELECTRON DENSITY IS REMARK 3 MISSING ABOVE 1SIGMA WERE GIVEN A 0.01 OCCUPANCY REMARK 4 REMARK 4 2CNY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1290028878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31544 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: SAFA ANTE WT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 4.60 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.22733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.45467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 63.34100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 105.56833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.11367 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.22733 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 84.45467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 105.56833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 63.34100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.11367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: FOR THE HETERO-ASSEMBLY DESCRIBED BY REMARK REMARK 300 350THE N-TERMINAL EXTENSION PEPTIDE OF ONE REMARK 300 SUBUNIT, CHAIN B,INSERTS INTO THE FOLD OF REMARK 300 ANOTHER, CHAIN A. THIS INTERACTIONIS REPETED IN REMARK 300 THE POLYMER, AN N-TERMINAL EXTENSION OFMOLECULE C REMARK 300 WOULD INSERT IN TO THE SUBUNIT OF MOLECULE B REMARK 300 , DINTO C ETC REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2007 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ILE 41 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO B 20 CA C O CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 65 88.94 -157.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CNZ RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH A 19-RESIDUE SAFA REMARK 900 NTE PEPTIDE (V13A MUTANT) REMARK 900 RELATED ID: 2CO1 RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH A 19-RESIDUE SAFA REMARK 900 NTE PEPTIDE (F17A MUTANT) REMARK 900 RELATED ID: 2CO2 RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH A 19-RESIDUE SAFA REMARK 900 NTE PEPTIDE (F3A MUTANT) REMARK 900 RELATED ID: 2CO3 RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN, HEAD-TO-TAIL SWAPPED DIMER OF NTD1 REMARK 900 MUTANT REMARK 900 RELATED ID: 2CO4 RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH A 19-RESIDUE SAFA REMARK 900 NTE PEPTIDE REMARK 900 RELATED ID: 2CO6 RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH THE SAFB CHAPERONE REMARK 900 (TYPE I) REMARK 900 RELATED ID: 2CO7 RELATED DB: PDB REMARK 900 SALMONELLA ENTERICA SAFA PILIN IN COMPLEX WITH THE SAFB CHAPERONE REMARK 900 (TYPE II) DBREF 2CNY A 20 21 PDB 2CNY 2CNY 20 21 DBREF 2CNY A 22 144 UNP Q8ZRK4 Q8ZRK4_SALTY 48 170 DBREF 2CNY B 1 20 UNP Q8ZRK4 Q8ZRK4_SALTY 27 46 SEQADV 2CNY ALA B 15 UNP Q8ZRK4 ILE 41 ENGINEERED MUTATION SEQRES 1 A 125 GLY SER ASP LEU THR VAL SER LEU ILE PRO VAL SER GLY SEQRES 2 A 125 LEU LYS ALA GLY LYS ASN ALA PRO SER ALA LYS ILE ALA SEQRES 3 A 125 LYS LEU VAL VAL ASN SER THR THR LEU LYS GLU PHE GLY SEQRES 4 A 125 VAL ARG GLY ILE SER ASN ASN VAL VAL ASP SER THR GLY SEQRES 5 A 125 THR ALA TRP ARG VAL ALA GLY LYS ASN THR GLY LYS GLU SEQRES 6 A 125 ILE GLY VAL GLY LEU SER SER ASP SER LEU ARG ARG SER SEQRES 7 A 125 ASP SER THR GLU LYS TRP ASN GLY VAL ASN TRP MET THR SEQRES 8 A 125 PHE ASN SER ASN ASP THR LEU ASP ILE VAL LEU THR GLY SEQRES 9 A 125 PRO ALA GLN ASN VAL THR ALA ASP THR TYR PRO ILE THR SEQRES 10 A 125 LEU ASP VAL VAL GLY TYR GLN PRO SEQRES 1 B 20 GLY SER PHE LEU PRO ASN SER GLU GLN GLN LYS SER VAL SEQRES 2 B 20 ASP ALA VAL PHE SER SER PRO FORMUL 3 HOH *99(H2 O) HELIX 1 1 SER A 90 ARG A 96 1 7 SHEET 1 AA 5 THR A 24 PRO A 29 0 SHEET 2 AA 5 LYS A 43 ASN A 50 -1 O LYS A 46 N ILE A 28 SHEET 3 AA 5 ASP A 115 LEU A 121 -1 O ASP A 115 N VAL A 49 SHEET 4 AA 5 GLU A 84 LEU A 89 -1 O GLY A 88 N VAL A 120 SHEET 5 AA 5 ALA A 73 ALA A 77 -1 O TRP A 74 N VAL A 87 SHEET 1 AB 2 GLY A 36 LYS A 37 0 SHEET 2 AB 2 ASN A 127 VAL A 128 -1 O VAL A 128 N GLY A 36 SHEET 1 AC 5 SER A 99 TRP A 103 0 SHEET 2 AC 5 VAL A 106 ASN A 112 -1 O VAL A 106 N TRP A 103 SHEET 3 AC 5 GLU A 56 ILE A 62 -1 O PHE A 57 N PHE A 111 SHEET 4 AC 5 ASP A 131 GLN A 143 -1 O THR A 136 N ILE A 62 SHEET 5 AC 5 SER B 2 PHE B 17 -1 O SER B 2 N GLN A 143 CRYST1 69.159 69.159 126.682 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014459 0.008348 0.000000 0.00000 SCALE2 0.000000 0.016696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007894 0.00000 TER 934 PRO A 144 TER 1084 PRO B 20 HETATM 1085 O HOH A2001 36.896 -17.840 36.080 1.00 22.22 O HETATM 1086 O HOH A2002 38.180 -17.966 42.395 1.00 25.79 O HETATM 1087 O HOH A2003 36.796 -10.975 40.426 1.00 35.56 O HETATM 1088 O HOH A2004 32.859 -4.175 29.556 1.00 23.89 O HETATM 1089 O HOH A2005 33.426 1.863 27.299 1.00 29.32 O HETATM 1090 O HOH A2006 29.586 4.719 27.336 1.00 23.50 O HETATM 1091 O HOH A2007 34.561 2.619 31.672 0.50 20.18 O HETATM 1092 O HOH A2008 22.657 7.317 30.714 1.00 28.02 O HETATM 1093 O HOH A2009 19.460 10.701 31.421 1.00 30.72 O HETATM 1094 O HOH A2010 25.028 3.265 31.037 1.00 17.29 O HETATM 1095 O HOH A2011 22.076 1.547 29.866 1.00 29.33 O HETATM 1096 O HOH A2012 16.823 -8.783 32.898 1.00 29.23 O HETATM 1097 O HOH A2013 23.356 -3.608 28.624 1.00 23.52 O HETATM 1098 O HOH A2014 25.692 -1.875 30.004 1.00 16.65 O HETATM 1099 O HOH A2015 22.962 -14.742 51.834 1.00 19.30 O HETATM 1100 O HOH A2016 38.945 -19.305 35.146 1.00 28.93 O HETATM 1101 O HOH A2017 36.048 -19.139 31.335 1.00 32.11 O HETATM 1102 O HOH A2018 38.807 -24.159 36.410 1.00 25.76 O HETATM 1103 O HOH A2019 38.615 -26.639 39.294 1.00 32.35 O HETATM 1104 O HOH A2020 20.711 -28.722 39.299 1.00 18.77 O HETATM 1105 O HOH A2021 12.838 -11.905 37.722 1.00 27.06 O HETATM 1106 O HOH A2022 19.673 -12.675 52.013 1.00 18.82 O HETATM 1107 O HOH A2023 21.528 -13.439 49.919 1.00 10.67 O HETATM 1108 O HOH A2024 26.010 -6.461 46.521 1.00 14.46 O HETATM 1109 O HOH A2025 23.225 -10.157 52.357 1.00 15.27 O HETATM 1110 O HOH A2026 23.496 0.174 52.734 1.00 23.89 O HETATM 1111 O HOH A2027 19.061 -8.440 53.321 1.00 18.62 O HETATM 1112 O HOH A2028 29.161 -7.714 29.982 1.00 32.98 O HETATM 1113 O HOH A2029 16.720 -14.495 50.225 1.00 18.14 O HETATM 1114 O HOH A2030 10.716 -13.371 46.636 1.00 22.95 O HETATM 1115 O HOH A2031 20.160 -18.061 44.338 1.00 12.30 O HETATM 1116 O HOH A2032 29.955 12.680 44.477 1.00 27.48 O HETATM 1117 O HOH A2033 22.925 -2.753 50.130 1.00 16.34 O HETATM 1118 O HOH A2034 15.335 -3.407 43.825 1.00 18.12 O HETATM 1119 O HOH A2035 28.385 1.408 49.328 1.00 17.16 O HETATM 1120 O HOH A2036 25.476 -1.789 49.175 1.00 11.86 O HETATM 1121 O HOH A2037 30.483 5.032 51.535 1.00 29.78 O HETATM 1122 O HOH A2038 17.578 -0.590 51.791 1.00 33.41 O HETATM 1123 O HOH A2039 16.425 3.543 48.094 1.00 35.48 O HETATM 1124 O HOH A2040 18.321 5.837 47.082 1.00 24.60 O HETATM 1125 O HOH A2041 21.601 -0.454 50.687 1.00 22.66 O HETATM 1126 O HOH A2042 17.078 -10.541 39.168 1.00 11.89 O HETATM 1127 O HOH A2043 21.523 -11.335 30.118 1.00 25.51 O HETATM 1128 O HOH A2044 12.794 -12.382 35.189 1.00 29.81 O HETATM 1129 O HOH A2045 13.510 -14.831 34.389 1.00 24.44 O HETATM 1130 O HOH A2046 17.827 -10.629 30.206 1.00 18.61 O HETATM 1131 O HOH A2047 14.555 -20.725 35.250 1.00 19.63 O HETATM 1132 O HOH A2048 17.273 -22.337 29.573 1.00 22.66 O HETATM 1133 O HOH A2049 13.982 -21.514 31.421 1.00 25.18 O HETATM 1134 O HOH A2050 23.041 -23.054 33.429 1.00 23.42 O HETATM 1135 O HOH A2051 15.775 -22.726 39.011 1.00 23.22 O HETATM 1136 O HOH A2052 13.408 -20.495 42.205 1.00 25.72 O HETATM 1137 O HOH A2053 17.199 -32.189 44.631 1.00 20.43 O HETATM 1138 O HOH A2054 21.238 -29.821 48.903 1.00 30.94 O HETATM 1139 O HOH A2055 17.549 -29.199 47.414 1.00 15.19 O HETATM 1140 O HOH A2056 22.289 -23.369 54.892 1.00 21.24 O HETATM 1141 O HOH A2057 21.041 -29.546 52.963 1.00 29.60 O HETATM 1142 O HOH A2058 19.080 -22.875 57.287 1.00 25.80 O HETATM 1143 O HOH A2059 13.634 -23.242 54.557 1.00 18.57 O HETATM 1144 O HOH A2060 17.689 -28.421 52.756 1.00 21.93 O HETATM 1145 O HOH A2061 11.128 -20.163 50.010 1.00 30.38 O HETATM 1146 O HOH A2062 22.990 -21.458 52.735 1.00 11.74 O HETATM 1147 O HOH A2063 26.958 -24.470 30.208 1.00 36.44 O HETATM 1148 O HOH A2064 27.190 -8.653 31.926 1.00 22.58 O HETATM 1149 O HOH A2065 16.672 -1.677 34.662 1.00 22.08 O HETATM 1150 O HOH A2066 16.641 -5.393 42.502 1.00 13.29 O HETATM 1151 O HOH A2067 14.778 -2.527 40.482 1.00 27.58 O HETATM 1152 O HOH A2068 14.526 -7.494 36.441 1.00 25.91 O HETATM 1153 O HOH A2069 13.850 -0.495 38.484 1.00 24.71 O HETATM 1154 O HOH A2070 11.360 0.719 31.500 1.00 31.03 O HETATM 1155 O HOH A2071 17.163 3.167 40.853 1.00 21.01 O HETATM 1156 O HOH A2072 17.924 0.730 34.088 1.00 17.17 O HETATM 1157 O HOH A2073 19.481 8.965 40.547 1.00 27.98 O HETATM 1158 O HOH A2074 27.191 12.227 41.438 1.00 20.06 O HETATM 1159 O HOH A2075 29.691 10.245 42.960 1.00 20.00 O HETATM 1160 O HOH A2076 24.716 11.884 38.241 1.00 19.29 O HETATM 1161 O HOH A2077 32.563 7.232 41.267 1.00 21.82 O HETATM 1162 O HOH A2078 35.633 3.910 41.705 1.00 29.07 O HETATM 1163 O HOH A2079 21.599 6.278 41.754 1.00 13.39 O HETATM 1164 O HOH A2080 26.846 -3.996 47.781 1.00 18.65 O HETATM 1165 O HOH A2081 25.043 -16.327 51.611 1.00 26.07 O HETATM 1166 O HOH A2082 20.206 -32.094 42.165 1.00 17.90 O HETATM 1167 O HOH A2083 20.116 -30.813 46.844 1.00 25.15 O HETATM 1168 O HOH B2001 19.248 -33.334 46.449 1.00 31.02 O HETATM 1169 O HOH B2002 23.936 -30.054 50.648 1.00 23.33 O HETATM 1170 O HOH B2003 33.171 -28.839 50.481 1.00 27.45 O HETATM 1171 O HOH B2004 35.834 -22.697 45.493 1.00 32.19 O HETATM 1172 O HOH B2005 26.540 -18.291 53.003 1.00 32.61 O HETATM 1173 O HOH B2006 30.785 -22.509 53.304 1.00 30.59 O HETATM 1174 O HOH B2007 35.769 -15.572 49.687 1.00 25.22 O HETATM 1175 O HOH B2008 36.439 -9.848 45.904 1.00 23.40 O HETATM 1176 O HOH B2009 35.686 -0.746 38.702 1.00 28.30 O HETATM 1177 O HOH B2010 36.166 -3.527 40.712 1.00 23.06 O HETATM 1178 O HOH B2011 32.202 -0.333 35.963 1.00 14.37 O HETATM 1179 O HOH B2012 31.761 1.833 33.598 1.00 12.94 O HETATM 1180 O HOH B2013 31.517 8.100 38.917 1.00 22.54 O HETATM 1181 O HOH B2014 33.828 7.961 36.973 1.00 33.08 O HETATM 1182 O HOH B2015 32.221 11.160 36.393 1.00 34.93 O HETATM 1183 O HOH B2016 31.495 10.868 39.734 1.00 33.62 O MASTER 363 0 0 1 12 0 0 6 1156 2 0 12 END