data_2CO9 # _entry.id 2CO9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CO9 pdb_00002co9 10.2210/pdb2co9/pdb RCSB RCSB024441 ? ? WWPDB D_1000024441 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt008001429.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CO9 _pdbx_database_status.recvd_initial_deposition_date 2005-05-17 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, H.' 1 'Saito, K.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the HMG_box domain of thymus high mobility group box protein TOX from mouse' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, H.' 1 ? primary 'Saito, K.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'thymus high mobility group box protein TOX' _entity.formula_weight 11054.450 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'HMG box' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLK QLAAYRASLVSKSYTDSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLK QLAAYRASLVSKSYTDSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt008001429.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LYS n 1 9 LYS n 1 10 LYS n 1 11 LYS n 1 12 LYS n 1 13 LYS n 1 14 ASP n 1 15 PRO n 1 16 ASN n 1 17 GLU n 1 18 PRO n 1 19 GLN n 1 20 LYS n 1 21 PRO n 1 22 VAL n 1 23 SER n 1 24 ALA n 1 25 TYR n 1 26 ALA n 1 27 LEU n 1 28 PHE n 1 29 PHE n 1 30 ARG n 1 31 ASP n 1 32 THR n 1 33 GLN n 1 34 ALA n 1 35 ALA n 1 36 ILE n 1 37 LYS n 1 38 GLY n 1 39 GLN n 1 40 ASN n 1 41 PRO n 1 42 ASN n 1 43 ALA n 1 44 THR n 1 45 PHE n 1 46 GLY n 1 47 GLU n 1 48 VAL n 1 49 SER n 1 50 LYS n 1 51 ILE n 1 52 VAL n 1 53 ALA n 1 54 SER n 1 55 MET n 1 56 TRP n 1 57 ASP n 1 58 GLY n 1 59 LEU n 1 60 GLY n 1 61 GLU n 1 62 GLU n 1 63 GLN n 1 64 LYS n 1 65 GLN n 1 66 VAL n 1 67 TYR n 1 68 LYS n 1 69 LYS n 1 70 LYS n 1 71 THR n 1 72 GLU n 1 73 ALA n 1 74 ALA n 1 75 LYS n 1 76 LYS n 1 77 GLU n 1 78 TYR n 1 79 LEU n 1 80 LYS n 1 81 GLN n 1 82 LEU n 1 83 ALA n 1 84 ALA n 1 85 TYR n 1 86 ARG n 1 87 ALA n 1 88 SER n 1 89 LEU n 1 90 VAL n 1 91 SER n 1 92 LYS n 1 93 SER n 1 94 TYR n 1 95 THR n 1 96 ASP n 1 97 SER n 1 98 GLY n 1 99 PRO n 1 100 SER n 1 101 SER n 1 102 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Tox _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040719-05 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8R4H0_MOUSE _struct_ref.pdbx_db_accession Q8R4H0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRA SLVSKSYTD ; _struct_ref.pdbx_align_begin 251 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CO9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 96 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8R4H0 _struct_ref_seq.db_align_beg 251 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 339 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 96 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CO9 GLY A 1 ? UNP Q8R4H0 ? ? 'cloning artifact' 1 1 1 2CO9 SER A 2 ? UNP Q8R4H0 ? ? 'cloning artifact' 2 2 1 2CO9 SER A 3 ? UNP Q8R4H0 ? ? 'cloning artifact' 3 3 1 2CO9 GLY A 4 ? UNP Q8R4H0 ? ? 'cloning artifact' 4 4 1 2CO9 SER A 5 ? UNP Q8R4H0 ? ? 'cloning artifact' 5 5 1 2CO9 SER A 6 ? UNP Q8R4H0 ? ? 'cloning artifact' 6 6 1 2CO9 GLY A 7 ? UNP Q8R4H0 ? ? 'cloning artifact' 7 7 1 2CO9 SER A 97 ? UNP Q8R4H0 ? ? 'cloning artifact' 97 8 1 2CO9 GLY A 98 ? UNP Q8R4H0 ? ? 'cloning artifact' 98 9 1 2CO9 PRO A 99 ? UNP Q8R4H0 ? ? 'cloning artifact' 99 10 1 2CO9 SER A 100 ? UNP Q8R4H0 ? ? 'cloning artifact' 100 11 1 2CO9 SER A 101 ? UNP Q8R4H0 ? ? 'cloning artifact' 101 12 1 2CO9 GLY A 102 ? UNP Q8R4H0 ? ? 'cloning artifact' 102 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.28mM HMG_box domain U-13C, 15N; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CO9 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CO9 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CO9 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B. A.' 3 'data analysis' KUJIRA 0.913 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2CO9 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CO9 _struct.title 'Solution structure of the HMG_box domain of thymus high mobility group box protein TOX from mouse' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CO9 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;Tox protein, HMG box domain, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 24 ? GLN A 39 ? ALA A 24 GLN A 39 1 ? 16 HELX_P HELX_P2 2 PHE A 45 ? TRP A 56 ? PHE A 45 TRP A 56 1 ? 12 HELX_P HELX_P3 3 GLU A 61 ? LEU A 89 ? GLU A 61 LEU A 89 1 ? 29 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2CO9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CO9 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? -130.45 -46.98 2 1 LYS A 9 ? ? 69.31 -70.17 3 1 LYS A 10 ? ? 78.19 -3.01 4 1 LYS A 12 ? ? -35.87 122.90 5 1 ASN A 16 ? ? -99.30 -155.22 6 1 GLU A 17 ? ? 60.06 139.10 7 1 LYS A 92 ? ? 63.10 98.56 8 1 TYR A 94 ? ? 68.18 176.47 9 1 THR A 95 ? ? 59.86 100.61 10 1 ASP A 96 ? ? -164.92 -35.15 11 1 SER A 97 ? ? 61.67 102.80 12 2 SER A 3 ? ? 54.64 81.10 13 2 SER A 5 ? ? 55.12 169.16 14 2 SER A 6 ? ? -178.74 -54.63 15 2 LYS A 8 ? ? 66.53 96.36 16 2 LYS A 9 ? ? 66.78 175.39 17 2 LYS A 10 ? ? 67.13 115.20 18 2 LYS A 11 ? ? 55.41 82.76 19 2 LYS A 13 ? ? -167.51 48.48 20 2 ASP A 14 ? ? 50.54 71.07 21 2 ASN A 16 ? ? -157.63 -41.83 22 2 SER A 23 ? ? -57.05 -173.34 23 2 THR A 44 ? ? -115.24 63.80 24 2 PHE A 45 ? ? 67.65 -72.35 25 2 TYR A 78 ? ? -39.59 -36.67 26 2 SER A 91 ? ? -71.29 -73.81 27 2 LYS A 92 ? ? 66.50 96.57 28 2 TYR A 94 ? ? -156.00 -53.00 29 2 SER A 97 ? ? 75.18 123.03 30 3 SER A 2 ? ? 62.26 146.65 31 3 SER A 3 ? ? -170.25 116.49 32 3 LYS A 9 ? ? 61.95 128.70 33 3 LYS A 10 ? ? -140.16 -64.03 34 3 ASN A 16 ? ? -146.86 -153.63 35 3 ALA A 87 ? ? -39.53 -36.76 36 3 LYS A 92 ? ? 69.15 129.80 37 3 THR A 95 ? ? 170.56 -27.87 38 3 ASP A 96 ? ? 62.01 177.25 39 3 SER A 97 ? ? -172.96 113.07 40 3 SER A 100 ? ? 56.21 173.45 41 4 SER A 6 ? ? 63.00 136.52 42 4 LYS A 8 ? ? -179.22 60.66 43 4 LYS A 11 ? ? -173.19 79.20 44 4 LYS A 12 ? ? 176.22 33.91 45 4 ASP A 14 ? ? 37.38 79.38 46 4 ASN A 16 ? ? -40.30 -90.98 47 4 SER A 23 ? ? -39.85 160.55 48 4 ALA A 83 ? ? -39.00 -25.77 49 4 LYS A 92 ? ? 68.58 148.43 50 4 SER A 93 ? ? -167.67 79.64 51 4 TYR A 94 ? ? -177.77 -50.11 52 4 SER A 101 ? ? -172.67 121.37 53 5 SER A 2 ? ? 81.06 -68.82 54 5 SER A 5 ? ? -160.54 84.42 55 5 SER A 6 ? ? 62.11 161.09 56 5 LYS A 8 ? ? -170.74 30.80 57 5 LYS A 10 ? ? -165.45 -71.40 58 5 LYS A 12 ? ? -146.86 -54.14 59 5 LYS A 13 ? ? -177.98 143.82 60 5 GLU A 17 ? ? -39.31 135.34 61 5 SER A 23 ? ? -44.07 168.22 62 5 THR A 44 ? ? -154.16 81.46 63 5 PHE A 45 ? ? 70.47 -69.21 64 5 LYS A 50 ? ? -38.52 -37.72 65 5 ALA A 83 ? ? -38.19 -30.23 66 5 SER A 91 ? ? -153.00 65.62 67 5 LYS A 92 ? ? -169.49 -45.10 68 5 SER A 97 ? ? -131.54 -52.59 69 5 SER A 100 ? ? -120.59 -154.30 70 6 SER A 3 ? ? -167.74 -44.21 71 6 SER A 5 ? ? 58.89 155.04 72 6 SER A 6 ? ? -176.85 142.23 73 6 LYS A 9 ? ? -100.21 78.96 74 6 LYS A 11 ? ? -37.60 114.75 75 6 LYS A 12 ? ? -172.88 -43.07 76 6 LYS A 13 ? ? 56.01 -83.14 77 6 ASN A 16 ? ? -174.36 -66.48 78 6 SER A 97 ? ? 177.32 149.67 79 7 SER A 2 ? ? 167.00 172.96 80 7 SER A 3 ? ? 63.27 136.46 81 7 SER A 5 ? ? 61.23 131.96 82 7 LYS A 13 ? ? -34.62 -80.52 83 7 PRO A 15 ? ? -69.81 -176.04 84 7 GLU A 17 ? ? 59.77 141.98 85 7 SER A 23 ? ? -47.44 166.74 86 7 PHE A 45 ? ? -39.50 -38.51 87 7 THR A 71 ? ? -37.66 -38.58 88 7 ALA A 87 ? ? -38.25 -28.34 89 7 THR A 95 ? ? -170.40 -42.05 90 7 ASP A 96 ? ? 70.00 90.53 91 8 SER A 2 ? ? -176.58 -54.56 92 8 SER A 3 ? ? -179.30 83.85 93 8 LYS A 8 ? ? -104.71 41.42 94 8 ASP A 14 ? ? 60.87 164.27 95 8 PRO A 15 ? ? -69.70 82.87 96 8 ASN A 16 ? ? 44.47 82.32 97 8 GLU A 17 ? ? -174.02 140.05 98 8 PHE A 45 ? ? 64.39 -73.99 99 8 SER A 91 ? ? -94.54 39.81 100 8 LYS A 92 ? ? -154.65 -56.01 101 8 SER A 93 ? ? 64.33 141.87 102 8 PRO A 99 ? ? -69.79 -179.76 103 9 SER A 2 ? ? -128.21 -51.75 104 9 SER A 3 ? ? 50.94 178.59 105 9 SER A 5 ? ? -173.52 119.10 106 9 LYS A 9 ? ? 34.79 89.12 107 9 LYS A 12 ? ? -95.60 59.83 108 9 GLU A 17 ? ? -178.26 139.54 109 9 SER A 23 ? ? -65.89 -164.81 110 9 LYS A 50 ? ? -38.87 -29.84 111 9 ALA A 83 ? ? -39.59 -36.40 112 9 VAL A 90 ? ? -90.92 52.05 113 9 SER A 91 ? ? 66.82 97.44 114 9 LYS A 92 ? ? 178.80 31.74 115 9 ASP A 96 ? ? -177.95 108.20 116 9 PRO A 99 ? ? -69.76 -176.33 117 10 SER A 5 ? ? -44.74 154.54 118 10 LYS A 9 ? ? 62.54 167.70 119 10 LYS A 10 ? ? -168.92 -48.85 120 10 LYS A 11 ? ? 64.27 98.89 121 10 LYS A 13 ? ? 49.24 -179.11 122 10 PRO A 15 ? ? -69.81 -178.90 123 10 GLU A 17 ? ? 62.07 138.78 124 10 SER A 23 ? ? -54.22 -179.93 125 10 TYR A 94 ? ? -39.96 154.03 126 10 ASP A 96 ? ? 67.67 174.26 127 10 SER A 97 ? ? 61.21 118.29 128 10 SER A 101 ? ? 57.38 177.85 129 11 SER A 3 ? ? -169.86 40.60 130 11 SER A 5 ? ? 59.93 -80.40 131 11 SER A 6 ? ? 77.45 89.59 132 11 LYS A 8 ? ? 54.09 173.17 133 11 LYS A 10 ? ? -167.52 88.08 134 11 LYS A 11 ? ? 65.75 128.90 135 11 LYS A 12 ? ? -178.52 100.89 136 11 LYS A 13 ? ? -128.47 -58.30 137 11 ASN A 16 ? ? 71.93 -67.05 138 11 GLU A 17 ? ? -37.37 147.04 139 11 SER A 23 ? ? -45.13 169.56 140 11 PHE A 45 ? ? 55.15 -85.00 141 11 LYS A 50 ? ? -34.26 -37.95 142 11 TYR A 85 ? ? -38.72 -36.34 143 11 ALA A 87 ? ? -39.08 -39.76 144 11 SER A 91 ? ? 56.92 -83.06 145 11 THR A 95 ? ? 173.24 121.82 146 11 SER A 101 ? ? 63.44 134.98 147 12 SER A 3 ? ? 58.95 167.72 148 12 SER A 5 ? ? 65.75 106.98 149 12 LYS A 8 ? ? 69.99 169.11 150 12 PRO A 15 ? ? -69.71 93.43 151 12 SER A 23 ? ? -56.17 172.75 152 12 PHE A 45 ? ? 62.55 -78.17 153 12 VAL A 90 ? ? -56.43 174.29 154 12 LYS A 92 ? ? 73.78 88.31 155 12 TYR A 94 ? ? -178.32 -56.66 156 12 THR A 95 ? ? 69.71 132.66 157 12 SER A 100 ? ? 71.92 148.48 158 12 SER A 101 ? ? 60.42 150.00 159 13 SER A 3 ? ? -175.87 132.43 160 13 SER A 5 ? ? 54.78 98.02 161 13 PRO A 15 ? ? -69.72 -176.32 162 13 ASN A 16 ? ? -81.15 -71.39 163 13 GLU A 17 ? ? -48.50 165.20 164 13 ALA A 43 ? ? -46.92 166.03 165 13 PHE A 45 ? ? 69.02 -76.89 166 13 LYS A 50 ? ? -38.65 -28.59 167 13 SER A 93 ? ? 65.35 94.44 168 13 ASP A 96 ? ? 56.45 92.96 169 14 SER A 3 ? ? -163.99 -57.54 170 14 SER A 5 ? ? 167.37 152.94 171 14 LYS A 10 ? ? 62.80 119.60 172 14 LYS A 11 ? ? 178.65 155.97 173 14 LYS A 13 ? ? 67.02 171.24 174 14 ASP A 14 ? ? 63.90 73.07 175 14 ASN A 16 ? ? 171.70 155.52 176 14 GLU A 17 ? ? 62.19 141.02 177 14 SER A 23 ? ? -57.23 175.15 178 14 ALA A 43 ? ? -66.39 -171.44 179 14 TYR A 78 ? ? -39.85 -39.47 180 14 TYR A 85 ? ? -39.88 -38.25 181 14 ALA A 87 ? ? -36.17 -39.19 182 14 SER A 100 ? ? -47.27 158.63 183 15 LYS A 11 ? ? -113.79 70.79 184 15 GLU A 17 ? ? 61.76 142.88 185 15 SER A 23 ? ? -58.52 175.00 186 15 ALA A 43 ? ? -45.98 154.83 187 15 PHE A 45 ? ? 59.19 -79.36 188 15 LYS A 50 ? ? -35.35 -33.11 189 15 ASP A 96 ? ? 52.38 94.07 190 15 SER A 100 ? ? 173.79 122.01 191 15 SER A 101 ? ? -166.66 91.29 192 16 SER A 2 ? ? 58.35 105.93 193 16 SER A 3 ? ? -168.71 42.66 194 16 SER A 5 ? ? -121.97 -50.13 195 16 SER A 6 ? ? 64.14 121.20 196 16 LYS A 9 ? ? -57.52 100.98 197 16 ASN A 16 ? ? -167.16 -66.87 198 16 SER A 23 ? ? -47.64 162.36 199 16 ALA A 43 ? ? -57.75 105.71 200 16 VAL A 48 ? ? -39.29 -37.53 201 16 TYR A 85 ? ? -39.19 -38.88 202 16 LYS A 92 ? ? -110.56 75.23 203 16 THR A 95 ? ? 56.71 95.68 204 16 SER A 100 ? ? 58.61 116.93 205 17 SER A 3 ? ? 54.11 -171.29 206 17 SER A 5 ? ? 48.27 89.84 207 17 LYS A 8 ? ? 61.44 112.46 208 17 LYS A 10 ? ? 63.25 81.71 209 17 LYS A 11 ? ? 64.09 144.47 210 17 ASP A 14 ? ? 34.60 74.59 211 17 ASN A 16 ? ? 162.06 160.40 212 17 GLU A 17 ? ? 61.60 141.52 213 17 SER A 23 ? ? -58.50 -177.70 214 17 LYS A 50 ? ? -34.43 -35.25 215 17 THR A 71 ? ? -38.80 -34.34 216 17 ALA A 83 ? ? -34.58 -31.81 217 17 SER A 91 ? ? -139.63 -51.43 218 17 THR A 95 ? ? 76.47 -55.07 219 17 SER A 97 ? ? 77.06 -61.34 220 17 SER A 100 ? ? -154.84 -53.75 221 18 SER A 5 ? ? -65.85 94.40 222 18 LYS A 9 ? ? -99.57 -66.25 223 18 ASP A 14 ? ? 39.04 81.23 224 18 ASN A 16 ? ? -174.04 -63.92 225 18 ALA A 43 ? ? -49.50 170.31 226 18 PHE A 45 ? ? 60.99 -79.09 227 18 LEU A 59 ? ? -58.35 -160.56 228 18 GLU A 61 ? ? 69.43 -69.79 229 18 ALA A 83 ? ? -39.32 -34.84 230 18 SER A 91 ? ? 178.37 -49.66 231 18 THR A 95 ? ? -40.48 161.23 232 18 ASP A 96 ? ? -169.25 -46.26 233 18 SER A 97 ? ? 71.11 165.27 234 19 SER A 6 ? ? 68.91 91.26 235 19 LYS A 8 ? ? -176.48 117.43 236 19 LYS A 11 ? ? -174.07 89.57 237 19 LYS A 12 ? ? -179.56 90.51 238 19 LYS A 13 ? ? -155.36 26.13 239 19 ASP A 14 ? ? 51.69 83.39 240 19 ASN A 16 ? ? -99.37 -78.58 241 19 PRO A 18 ? ? -69.78 -178.38 242 19 SER A 23 ? ? -45.44 158.51 243 19 ALA A 87 ? ? -37.46 -29.25 244 19 LYS A 92 ? ? 70.10 121.59 245 19 THR A 95 ? ? -172.66 149.67 246 19 SER A 100 ? ? -37.65 148.34 247 20 SER A 2 ? ? -138.35 -61.14 248 20 SER A 5 ? ? 60.51 123.98 249 20 LYS A 9 ? ? -60.65 -77.58 250 20 LYS A 10 ? ? 56.53 81.05 251 20 LYS A 11 ? ? -36.22 -86.09 252 20 PRO A 15 ? ? -69.78 2.85 253 20 GLU A 17 ? ? 61.92 142.82 254 20 SER A 23 ? ? -68.29 -176.44 255 20 ASN A 40 ? ? -156.53 79.44 256 20 PHE A 45 ? ? 61.98 -77.52 257 20 THR A 95 ? ? 71.42 -69.32 258 20 SER A 97 ? ? -175.78 113.03 #