data_2CPC # _entry.id 2CPC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CPC pdb_00002cpc 10.2210/pdb2cpc/pdb RCSB RCSB024475 ? ? WWPDB D_1000024475 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002100640.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CPC _pdbx_database_status.recvd_initial_deposition_date 2005-05-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ruhul Momen, A.Z.M.' 1 'Onuki, H.' 2 'Hirota, H.' 3 'Hayashi, F.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of RSGI RUH-030, an Ig like domain from human cDNA' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ruhul Momen, A.Z.M.' 1 ? primary 'Onuki, H.' 2 ? primary 'Hirota, H.' 3 ? primary 'Hayashi, F.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'KIAA0657 protein' _entity.formula_weight 12329.789 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Ig like Domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDS GEYLCEIDDESASFTVTVTEPPVRIIYSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDS GEYLCEIDDESASFTVTVTEPPVRIIYSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002100640.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 THR n 1 9 ASP n 1 10 VAL n 1 11 SER n 1 12 SER n 1 13 TRP n 1 14 ILE n 1 15 VAL n 1 16 TYR n 1 17 PRO n 1 18 SER n 1 19 GLY n 1 20 LYS n 1 21 VAL n 1 22 TYR n 1 23 VAL n 1 24 ALA n 1 25 ALA n 1 26 VAL n 1 27 ARG n 1 28 LEU n 1 29 GLU n 1 30 ARG n 1 31 VAL n 1 32 VAL n 1 33 LEU n 1 34 THR n 1 35 CYS n 1 36 GLU n 1 37 LEU n 1 38 CYS n 1 39 ARG n 1 40 PRO n 1 41 TRP n 1 42 ALA n 1 43 GLU n 1 44 VAL n 1 45 ARG n 1 46 TRP n 1 47 THR n 1 48 LYS n 1 49 ASP n 1 50 GLY n 1 51 GLU n 1 52 GLU n 1 53 VAL n 1 54 VAL n 1 55 GLU n 1 56 SER n 1 57 PRO n 1 58 ALA n 1 59 LEU n 1 60 LEU n 1 61 LEU n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 ASP n 1 66 THR n 1 67 VAL n 1 68 ARG n 1 69 ARG n 1 70 LEU n 1 71 VAL n 1 72 LEU n 1 73 PRO n 1 74 ALA n 1 75 VAL n 1 76 GLN n 1 77 LEU n 1 78 GLU n 1 79 ASP n 1 80 SER n 1 81 GLY n 1 82 GLU n 1 83 TYR n 1 84 LEU n 1 85 CYS n 1 86 GLU n 1 87 ILE n 1 88 ASP n 1 89 ASP n 1 90 GLU n 1 91 SER n 1 92 ALA n 1 93 SER n 1 94 PHE n 1 95 THR n 1 96 VAL n 1 97 THR n 1 98 VAL n 1 99 THR n 1 100 GLU n 1 101 PRO n 1 102 PRO n 1 103 VAL n 1 104 ARG n 1 105 ILE n 1 106 ILE n 1 107 TYR n 1 108 SER n 1 109 GLY n 1 110 PRO n 1 111 SER n 1 112 SER n 1 113 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040202-73 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free Protein Synthesis (E.coli)' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O75147_HUMAN _struct_ref.pdbx_db_accession O75147 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEI DDESASFTVTVTEPPVRIIY ; _struct_ref.pdbx_align_begin 729 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CPC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75147 _struct_ref_seq.db_align_beg 729 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 828 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 107 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CPC GLY A 1 ? UNP O75147 ? ? 'cloning artifact' 1 1 1 2CPC SER A 2 ? UNP O75147 ? ? 'cloning artifact' 2 2 1 2CPC SER A 3 ? UNP O75147 ? ? 'cloning artifact' 3 3 1 2CPC GLY A 4 ? UNP O75147 ? ? 'cloning artifact' 4 4 1 2CPC SER A 5 ? UNP O75147 ? ? 'cloning artifact' 5 5 1 2CPC SER A 6 ? UNP O75147 ? ? 'cloning artifact' 6 6 1 2CPC GLY A 7 ? UNP O75147 ? ? 'cloning artifact' 7 7 1 2CPC SER A 108 ? UNP O75147 ? ? 'cloning artifact' 108 8 1 2CPC GLY A 109 ? UNP O75147 ? ? 'cloning artifact' 109 9 1 2CPC PRO A 110 ? UNP O75147 ? ? 'cloning artifact' 110 10 1 2CPC SER A 111 ? UNP O75147 ? ? 'cloning artifact' 111 11 1 2CPC SER A 112 ? UNP O75147 ? ? 'cloning artifact' 112 12 1 2CPC GLY A 113 ? UNP O75147 ? ? 'cloning artifact' 113 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '120mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.66mM Ig Domain U 15N, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CPC _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CPC _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CPC _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1c Varian 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMEView 5.0.4 'Johnson, B.A.' 3 'data analysis' Kijira 0.9295 'Kobayashi, N.' 4 'data analysis' CYANA 2.0.17 'Guntert, P.' 5 # _exptl.entry_id 2CPC _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CPC _struct.title 'Solution structure of RSGI RUH-030, an Ig like domain from human cDNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CPC _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;Immunoglobulin domain, ig domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, IMMUNE SYSTEM ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 1 -0.06 2 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 2 -0.07 3 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 3 -0.03 4 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 4 -0.09 5 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 5 -0.12 6 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 6 -0.05 7 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 7 -0.06 8 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 8 -0.03 9 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 9 -0.07 10 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 10 -0.03 11 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 11 -0.07 12 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 12 -0.03 13 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 13 -0.01 14 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 14 -0.01 15 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 15 -0.12 16 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 16 -0.05 17 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 17 -0.01 18 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 18 -0.08 19 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 19 -0.15 20 TYR 16 A . ? TYR 16 A PRO 17 A ? PRO 17 A 20 -0.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 14 ? TYR A 16 ? ILE A 14 TYR A 16 A 2 VAL A 31 ? LEU A 37 ? VAL A 31 LEU A 37 A 3 VAL A 67 ? LEU A 72 ? VAL A 67 LEU A 72 A 4 LEU A 60 ? LYS A 63 ? LEU A 60 LYS A 63 B 1 VAL A 21 ? VAL A 26 ? VAL A 21 VAL A 26 B 2 SER A 91 ? THR A 99 ? SER A 91 THR A 99 B 3 GLY A 81 ? GLU A 86 ? GLY A 81 GLU A 86 B 4 ARG A 45 ? LYS A 48 ? ARG A 45 LYS A 48 B 5 GLU A 51 ? GLU A 52 ? GLU A 51 GLU A 52 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 16 ? N TYR A 16 O GLU A 36 ? O GLU A 36 A 2 3 N CYS A 35 ? N CYS A 35 O ARG A 68 ? O ARG A 68 A 3 4 O ARG A 69 ? O ARG A 69 N GLN A 62 ? N GLN A 62 B 1 2 N VAL A 21 ? N VAL A 21 O THR A 95 ? O THR A 95 B 2 3 O ALA A 92 ? O ALA A 92 N CYS A 85 ? N CYS A 85 B 3 4 O LEU A 84 ? O LEU A 84 N THR A 47 ? N THR A 47 B 4 5 N LYS A 48 ? N LYS A 48 O GLU A 51 ? O GLU A 51 # _database_PDB_matrix.entry_id 2CPC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CPC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 TRP 46 46 46 TRP TRP A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 CYS 85 85 85 CYS CYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLY 113 113 113 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 9 ? ? -63.02 88.70 2 1 SER A 11 ? ? -99.28 -61.41 3 1 SER A 18 ? ? -104.57 64.10 4 1 PRO A 57 ? ? -69.76 4.03 5 1 ALA A 74 ? ? -167.72 107.76 6 1 ASP A 88 ? ? -135.02 -72.42 7 1 ARG A 104 ? ? -134.30 -46.74 8 1 ILE A 105 ? ? -55.92 105.33 9 1 SER A 111 ? ? -56.54 100.26 10 2 SER A 18 ? ? -104.99 64.94 11 2 GLU A 55 ? ? -38.44 147.50 12 2 PRO A 57 ? ? -69.70 3.11 13 2 ASP A 65 ? ? -50.06 -71.40 14 2 ALA A 74 ? ? -166.96 110.57 15 2 ILE A 87 ? ? -112.85 -76.59 16 2 ASP A 88 ? ? -113.06 -71.68 17 2 TYR A 107 ? ? -95.95 39.25 18 3 THR A 8 ? ? -89.82 41.68 19 3 SER A 11 ? ? -91.98 -61.89 20 3 ILE A 14 ? ? -64.86 92.26 21 3 SER A 18 ? ? -106.79 65.57 22 3 TRP A 41 ? ? -81.96 40.81 23 3 PRO A 57 ? ? -69.79 5.01 24 3 ALA A 74 ? ? -163.89 105.01 25 3 ASP A 88 ? ? -134.98 -72.26 26 3 ARG A 104 ? ? -130.77 -58.69 27 4 SER A 2 ? ? -51.56 106.02 28 4 SER A 12 ? ? -34.97 110.17 29 4 SER A 18 ? ? -102.67 63.74 30 4 ASP A 49 ? ? 72.28 40.34 31 4 PRO A 57 ? ? -69.71 1.49 32 4 ALA A 74 ? ? -160.34 105.45 33 4 ILE A 87 ? ? -109.64 -61.09 34 4 ASP A 88 ? ? -133.93 -71.89 35 5 SER A 3 ? ? -47.38 164.37 36 5 SER A 12 ? ? -34.56 105.86 37 5 SER A 18 ? ? -104.89 65.04 38 5 TRP A 41 ? ? -82.71 33.04 39 5 ASP A 49 ? ? 72.57 36.11 40 5 PRO A 57 ? ? -69.78 2.99 41 5 ALA A 74 ? ? -160.45 105.60 42 5 ASP A 88 ? ? -135.02 -72.55 43 5 ARG A 104 ? ? -130.19 -44.45 44 6 SER A 12 ? ? -165.24 114.42 45 6 TYR A 16 ? ? -173.23 145.37 46 6 SER A 18 ? ? -105.97 64.47 47 6 ASP A 49 ? ? 71.27 35.80 48 6 PRO A 57 ? ? -69.80 1.42 49 6 ASP A 88 ? ? -135.04 -72.95 50 6 PRO A 110 ? ? -69.79 99.48 51 7 THR A 8 ? ? 37.20 41.18 52 7 ASP A 9 ? ? -53.26 100.53 53 7 SER A 18 ? ? -103.51 63.67 54 7 PRO A 57 ? ? -69.77 3.51 55 7 ALA A 74 ? ? -162.67 107.39 56 7 ASP A 88 ? ? -135.02 -73.09 57 7 PRO A 102 ? ? -69.81 -178.73 58 7 ILE A 105 ? ? -63.19 85.03 59 8 SER A 11 ? ? 38.89 30.06 60 8 SER A 12 ? ? -174.07 122.94 61 8 TYR A 16 ? ? -172.50 146.23 62 8 SER A 18 ? ? -104.44 64.19 63 8 GLU A 55 ? ? -37.84 146.28 64 8 PRO A 57 ? ? -69.74 3.44 65 8 ASP A 65 ? ? -51.79 -70.47 66 8 ALA A 74 ? ? -161.36 107.56 67 8 ILE A 87 ? ? -105.28 -77.39 68 8 ILE A 105 ? ? -39.57 127.50 69 8 SER A 112 ? ? -41.15 152.63 70 9 SER A 12 ? ? -162.11 119.31 71 9 ILE A 14 ? ? -68.50 91.39 72 9 TYR A 16 ? ? -173.85 144.46 73 9 SER A 18 ? ? -100.61 63.42 74 9 TRP A 41 ? ? -82.30 34.38 75 9 GLU A 55 ? ? -35.69 143.18 76 9 PRO A 57 ? ? -69.81 2.65 77 9 ASP A 65 ? ? -34.84 -73.03 78 9 ALA A 74 ? ? -162.33 105.94 79 9 ILE A 87 ? ? -126.39 -63.34 80 9 ASP A 88 ? ? -134.19 -72.39 81 9 PRO A 102 ? ? -69.70 -179.10 82 9 ILE A 105 ? ? -36.11 134.97 83 10 ILE A 14 ? ? -67.52 94.89 84 10 SER A 18 ? ? -106.53 64.65 85 10 TRP A 41 ? ? -86.69 31.33 86 10 GLU A 55 ? ? -42.07 150.73 87 10 PRO A 57 ? ? -69.76 4.69 88 10 ALA A 74 ? ? -161.99 106.63 89 10 ASP A 88 ? ? -135.01 -72.40 90 10 ARG A 104 ? ? -160.34 118.49 91 10 ILE A 105 ? ? 34.01 53.15 92 11 SER A 6 ? ? -37.50 104.37 93 11 SER A 18 ? ? -104.30 64.22 94 11 TRP A 41 ? ? -83.34 31.30 95 11 PRO A 57 ? ? -69.72 0.42 96 11 ALA A 74 ? ? -163.73 108.23 97 11 ILE A 87 ? ? -106.87 -75.36 98 11 ASP A 88 ? ? -116.03 -71.29 99 12 SER A 6 ? ? -162.66 113.35 100 12 SER A 18 ? ? -102.53 63.91 101 12 TRP A 41 ? ? -86.35 31.12 102 12 ASP A 49 ? ? 71.13 38.45 103 12 PRO A 57 ? ? -69.78 2.25 104 12 ASP A 65 ? ? -49.57 -71.12 105 12 ALA A 74 ? ? -162.52 105.29 106 12 ASP A 88 ? ? -134.98 -72.86 107 12 PRO A 102 ? ? -69.78 -180.00 108 12 ARG A 104 ? ? -133.45 -45.43 109 12 TYR A 107 ? ? 72.88 54.60 110 12 PRO A 110 ? ? -69.80 90.29 111 13 SER A 12 ? ? -42.49 104.87 112 13 TYR A 16 ? ? -171.01 145.76 113 13 TRP A 41 ? ? -82.68 37.35 114 13 ASP A 49 ? ? 74.99 30.23 115 13 PRO A 57 ? ? -69.69 2.67 116 13 ALA A 74 ? ? -165.24 106.54 117 13 ASP A 88 ? ? -134.96 -72.38 118 13 PRO A 102 ? ? -69.83 -178.88 119 14 SER A 3 ? ? -56.33 171.86 120 14 SER A 6 ? ? -174.10 140.11 121 14 SER A 18 ? ? -100.65 63.31 122 14 TRP A 41 ? ? -84.15 30.98 123 14 PRO A 57 ? ? -69.78 4.31 124 14 ALA A 74 ? ? -160.56 105.62 125 14 ASP A 88 ? ? -135.01 -72.23 126 14 ARG A 104 ? ? -133.96 -74.95 127 14 SER A 111 ? ? 38.33 43.28 128 15 SER A 5 ? ? -39.39 127.03 129 15 THR A 8 ? ? -166.69 114.39 130 15 ILE A 14 ? ? -66.44 94.35 131 15 SER A 18 ? ? -104.41 63.85 132 15 PRO A 57 ? ? -69.74 3.61 133 15 ASP A 65 ? ? -48.85 -71.61 134 15 ALA A 74 ? ? -160.34 107.56 135 15 ASP A 88 ? ? -134.96 -72.37 136 15 ARG A 104 ? ? -124.19 -61.29 137 15 PRO A 110 ? ? -69.80 1.09 138 16 ASP A 9 ? ? -47.59 106.96 139 16 SER A 18 ? ? -112.47 66.66 140 16 TRP A 41 ? ? -88.43 33.59 141 16 ASP A 49 ? ? 73.55 36.60 142 16 GLU A 55 ? ? -35.49 147.54 143 16 PRO A 57 ? ? -69.74 6.28 144 16 ASP A 65 ? ? -50.71 -71.30 145 16 ALA A 74 ? ? -162.37 105.17 146 16 ASP A 88 ? ? -135.00 -72.53 147 17 TYR A 16 ? ? -174.31 145.00 148 17 SER A 18 ? ? -109.74 66.31 149 17 ASP A 49 ? ? 71.68 34.32 150 17 GLU A 55 ? ? -33.77 147.12 151 17 PRO A 57 ? ? -69.79 1.28 152 17 ASP A 65 ? ? -48.41 -71.48 153 17 ALA A 74 ? ? -164.66 107.74 154 17 ILE A 87 ? ? -130.19 -74.23 155 17 ASP A 88 ? ? -123.68 -71.77 156 17 PRO A 102 ? ? -69.74 -178.65 157 17 ILE A 105 ? ? -56.55 107.99 158 18 SER A 2 ? ? -170.27 124.73 159 18 SER A 6 ? ? -89.44 42.94 160 18 GLU A 55 ? ? -39.94 145.04 161 18 PRO A 57 ? ? -69.78 3.30 162 18 ASP A 65 ? ? -43.85 -71.32 163 18 ILE A 87 ? ? -123.92 -70.16 164 18 ASP A 88 ? ? -124.61 -72.05 165 18 ARG A 104 ? ? -131.69 -59.31 166 19 ASP A 9 ? ? -96.66 43.20 167 19 SER A 11 ? ? 34.27 47.99 168 19 SER A 18 ? ? -106.65 64.37 169 19 PRO A 57 ? ? -69.76 4.50 170 19 ALA A 74 ? ? -161.01 106.59 171 19 ILE A 87 ? ? -105.64 -67.52 172 19 ASP A 88 ? ? -122.74 -71.74 173 19 ILE A 105 ? ? -37.02 125.06 174 20 SER A 12 ? ? -36.64 102.91 175 20 SER A 18 ? ? -109.92 66.33 176 20 TRP A 41 ? ? -84.77 30.94 177 20 ASP A 49 ? ? 71.53 38.70 178 20 GLU A 55 ? ? -38.60 147.18 179 20 PRO A 57 ? ? -69.73 2.38 180 20 ALA A 74 ? ? -161.15 105.00 181 20 ASP A 88 ? ? -134.98 -72.40 182 20 PRO A 102 ? ? -69.77 -178.85 #