data_2CPI # _entry.id 2CPI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CPI pdb_00002cpi 10.2210/pdb2cpi/pdb RCSB RCSB024480 ? ? WWPDB D_1000024480 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt008001487.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CPI _pdbx_database_status.recvd_initial_deposition_date 2005-05-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the RNA recognition motif of CNOT4' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagata, T.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'CCR4-NOT transcription complex subunit 4' _entity.formula_weight 11706.180 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 6.3.2.- _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'E3 ubiquitin protein ligase CNOT4, CCR4-associated factor 4, Potential transcriptional repressor NOT4Hp' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAI QCVNNVVVDGRTLKASLGTTKYCSYSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAI QCVNNVVVDGRTLKASLGTTKYCSYSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt008001487.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 SER n 1 10 VAL n 1 11 ARG n 1 12 VAL n 1 13 VAL n 1 14 GLN n 1 15 LYS n 1 16 ASN n 1 17 LEU n 1 18 VAL n 1 19 PHE n 1 20 VAL n 1 21 VAL n 1 22 GLY n 1 23 LEU n 1 24 SER n 1 25 GLN n 1 26 ARG n 1 27 LEU n 1 28 ALA n 1 29 ASP n 1 30 PRO n 1 31 GLU n 1 32 VAL n 1 33 LEU n 1 34 LYS n 1 35 ARG n 1 36 PRO n 1 37 GLU n 1 38 TYR n 1 39 PHE n 1 40 GLY n 1 41 LYS n 1 42 PHE n 1 43 GLY n 1 44 LYS n 1 45 ILE n 1 46 HIS n 1 47 LYS n 1 48 VAL n 1 49 VAL n 1 50 ILE n 1 51 ASN n 1 52 ASN n 1 53 SER n 1 54 THR n 1 55 SER n 1 56 TYR n 1 57 ALA n 1 58 GLY n 1 59 SER n 1 60 GLN n 1 61 GLY n 1 62 PRO n 1 63 SER n 1 64 ALA n 1 65 SER n 1 66 ALA n 1 67 TYR n 1 68 VAL n 1 69 THR n 1 70 TYR n 1 71 ILE n 1 72 ARG n 1 73 SER n 1 74 GLU n 1 75 ASP n 1 76 ALA n 1 77 LEU n 1 78 ARG n 1 79 ALA n 1 80 ILE n 1 81 GLN n 1 82 CYS n 1 83 VAL n 1 84 ASN n 1 85 ASN n 1 86 VAL n 1 87 VAL n 1 88 VAL n 1 89 ASP n 1 90 GLY n 1 91 ARG n 1 92 THR n 1 93 LEU n 1 94 LYS n 1 95 ALA n 1 96 SER n 1 97 LEU n 1 98 GLY n 1 99 THR n 1 100 THR n 1 101 LYS n 1 102 TYR n 1 103 CYS n 1 104 SER n 1 105 TYR n 1 106 SER n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 SER n 1 111 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Cnot4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p040727-12 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CNOT4_MOUSE _struct_ref.pdbx_db_accession Q8BT14 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV VDGRTLKASLGTTKYCSY ; _struct_ref.pdbx_align_begin 101 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CPI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8BT14 _struct_ref_seq.db_align_beg 101 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 198 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 101 _struct_ref_seq.pdbx_auth_seq_align_end 198 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CPI GLY A 1 ? UNP Q8BT14 ? ? 'cloning artifact' 94 1 1 2CPI SER A 2 ? UNP Q8BT14 ? ? 'cloning artifact' 95 2 1 2CPI SER A 3 ? UNP Q8BT14 ? ? 'cloning artifact' 96 3 1 2CPI GLY A 4 ? UNP Q8BT14 ? ? 'cloning artifact' 97 4 1 2CPI SER A 5 ? UNP Q8BT14 ? ? 'cloning artifact' 98 5 1 2CPI SER A 6 ? UNP Q8BT14 ? ? 'cloning artifact' 99 6 1 2CPI GLY A 7 ? UNP Q8BT14 ? ? 'cloning artifact' 100 7 1 2CPI SER A 106 ? UNP Q8BT14 ? ? 'cloning artifact' 199 8 1 2CPI GLY A 107 ? UNP Q8BT14 ? ? 'cloning artifact' 200 9 1 2CPI PRO A 108 ? UNP Q8BT14 ? ? 'cloning artifact' 201 10 1 2CPI SER A 109 ? UNP Q8BT14 ? ? 'cloning artifact' 202 11 1 2CPI SER A 110 ? UNP Q8BT14 ? ? 'cloning artifact' 203 12 1 2CPI GLY A 111 ? UNP Q8BT14 ? ? 'cloning artifact' 204 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.75mM 13C/15N-PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CPI _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CPI _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CPI _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801/20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.925 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2CPI _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CPI _struct.title 'Solution structure of the RNA recognition motif of CNOT4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CPI _struct_keywords.pdbx_keywords 'GENE REGULATION' _struct_keywords.text ;RNA recognition motif, RRM, RNP, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, GENE REGULATION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 30 ? LYS A 34 ? PRO A 123 LYS A 127 1 ? 5 HELX_P HELX_P2 2 SER A 73 ? VAL A 83 ? SER A 166 VAL A 176 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 1 0.05 2 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 2 0.10 3 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 3 0.11 4 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 4 0.01 5 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 5 0.06 6 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 6 0.01 7 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 7 0.12 8 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 8 0.04 9 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 9 -0.01 10 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 10 0.07 11 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 11 0.05 12 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 12 0.01 13 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 13 -0.02 14 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 14 0.09 15 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 15 0.07 16 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 16 0.12 17 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 17 0.09 18 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 18 0.03 19 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 19 0.02 20 GLY 107 A . ? GLY 200 A PRO 108 A ? PRO 201 A 20 0.11 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 45 ? ASN A 51 ? ILE A 138 ASN A 144 A 2 ALA A 64 ? TYR A 70 ? ALA A 157 TYR A 163 A 3 VAL A 18 ? VAL A 21 ? VAL A 111 VAL A 114 A 4 ARG A 91 ? LEU A 93 ? ARG A 184 LEU A 186 A 5 LYS A 94 ? SER A 96 ? LYS A 187 SER A 189 A 6 VAL A 86 ? VAL A 88 ? VAL A 179 VAL A 181 # _database_PDB_matrix.entry_id 2CPI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CPI _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 94 94 GLY GLY A . n A 1 2 SER 2 95 95 SER SER A . n A 1 3 SER 3 96 96 SER SER A . n A 1 4 GLY 4 97 97 GLY GLY A . n A 1 5 SER 5 98 98 SER SER A . n A 1 6 SER 6 99 99 SER SER A . n A 1 7 GLY 7 100 100 GLY GLY A . n A 1 8 ALA 8 101 101 ALA ALA A . n A 1 9 SER 9 102 102 SER SER A . n A 1 10 VAL 10 103 103 VAL VAL A . n A 1 11 ARG 11 104 104 ARG ARG A . n A 1 12 VAL 12 105 105 VAL VAL A . n A 1 13 VAL 13 106 106 VAL VAL A . n A 1 14 GLN 14 107 107 GLN GLN A . n A 1 15 LYS 15 108 108 LYS LYS A . n A 1 16 ASN 16 109 109 ASN ASN A . n A 1 17 LEU 17 110 110 LEU LEU A . n A 1 18 VAL 18 111 111 VAL VAL A . n A 1 19 PHE 19 112 112 PHE PHE A . n A 1 20 VAL 20 113 113 VAL VAL A . n A 1 21 VAL 21 114 114 VAL VAL A . n A 1 22 GLY 22 115 115 GLY GLY A . n A 1 23 LEU 23 116 116 LEU LEU A . n A 1 24 SER 24 117 117 SER SER A . n A 1 25 GLN 25 118 118 GLN GLN A . n A 1 26 ARG 26 119 119 ARG ARG A . n A 1 27 LEU 27 120 120 LEU LEU A . n A 1 28 ALA 28 121 121 ALA ALA A . n A 1 29 ASP 29 122 122 ASP ASP A . n A 1 30 PRO 30 123 123 PRO PRO A . n A 1 31 GLU 31 124 124 GLU GLU A . n A 1 32 VAL 32 125 125 VAL VAL A . n A 1 33 LEU 33 126 126 LEU LEU A . n A 1 34 LYS 34 127 127 LYS LYS A . n A 1 35 ARG 35 128 128 ARG ARG A . n A 1 36 PRO 36 129 129 PRO PRO A . n A 1 37 GLU 37 130 130 GLU GLU A . n A 1 38 TYR 38 131 131 TYR TYR A . n A 1 39 PHE 39 132 132 PHE PHE A . n A 1 40 GLY 40 133 133 GLY GLY A . n A 1 41 LYS 41 134 134 LYS LYS A . n A 1 42 PHE 42 135 135 PHE PHE A . n A 1 43 GLY 43 136 136 GLY GLY A . n A 1 44 LYS 44 137 137 LYS LYS A . n A 1 45 ILE 45 138 138 ILE ILE A . n A 1 46 HIS 46 139 139 HIS HIS A . n A 1 47 LYS 47 140 140 LYS LYS A . n A 1 48 VAL 48 141 141 VAL VAL A . n A 1 49 VAL 49 142 142 VAL VAL A . n A 1 50 ILE 50 143 143 ILE ILE A . n A 1 51 ASN 51 144 144 ASN ASN A . n A 1 52 ASN 52 145 145 ASN ASN A . n A 1 53 SER 53 146 146 SER SER A . n A 1 54 THR 54 147 147 THR THR A . n A 1 55 SER 55 148 148 SER SER A . n A 1 56 TYR 56 149 149 TYR TYR A . n A 1 57 ALA 57 150 150 ALA ALA A . n A 1 58 GLY 58 151 151 GLY GLY A . n A 1 59 SER 59 152 152 SER SER A . n A 1 60 GLN 60 153 153 GLN GLN A . n A 1 61 GLY 61 154 154 GLY GLY A . n A 1 62 PRO 62 155 155 PRO PRO A . n A 1 63 SER 63 156 156 SER SER A . n A 1 64 ALA 64 157 157 ALA ALA A . n A 1 65 SER 65 158 158 SER SER A . n A 1 66 ALA 66 159 159 ALA ALA A . n A 1 67 TYR 67 160 160 TYR TYR A . n A 1 68 VAL 68 161 161 VAL VAL A . n A 1 69 THR 69 162 162 THR THR A . n A 1 70 TYR 70 163 163 TYR TYR A . n A 1 71 ILE 71 164 164 ILE ILE A . n A 1 72 ARG 72 165 165 ARG ARG A . n A 1 73 SER 73 166 166 SER SER A . n A 1 74 GLU 74 167 167 GLU GLU A . n A 1 75 ASP 75 168 168 ASP ASP A . n A 1 76 ALA 76 169 169 ALA ALA A . n A 1 77 LEU 77 170 170 LEU LEU A . n A 1 78 ARG 78 171 171 ARG ARG A . n A 1 79 ALA 79 172 172 ALA ALA A . n A 1 80 ILE 80 173 173 ILE ILE A . n A 1 81 GLN 81 174 174 GLN GLN A . n A 1 82 CYS 82 175 175 CYS CYS A . n A 1 83 VAL 83 176 176 VAL VAL A . n A 1 84 ASN 84 177 177 ASN ASN A . n A 1 85 ASN 85 178 178 ASN ASN A . n A 1 86 VAL 86 179 179 VAL VAL A . n A 1 87 VAL 87 180 180 VAL VAL A . n A 1 88 VAL 88 181 181 VAL VAL A . n A 1 89 ASP 89 182 182 ASP ASP A . n A 1 90 GLY 90 183 183 GLY GLY A . n A 1 91 ARG 91 184 184 ARG ARG A . n A 1 92 THR 92 185 185 THR THR A . n A 1 93 LEU 93 186 186 LEU LEU A . n A 1 94 LYS 94 187 187 LYS LYS A . n A 1 95 ALA 95 188 188 ALA ALA A . n A 1 96 SER 96 189 189 SER SER A . n A 1 97 LEU 97 190 190 LEU LEU A . n A 1 98 GLY 98 191 191 GLY GLY A . n A 1 99 THR 99 192 192 THR THR A . n A 1 100 THR 100 193 193 THR THR A . n A 1 101 LYS 101 194 194 LYS LYS A . n A 1 102 TYR 102 195 195 TYR TYR A . n A 1 103 CYS 103 196 196 CYS CYS A . n A 1 104 SER 104 197 197 SER SER A . n A 1 105 TYR 105 198 198 TYR TYR A . n A 1 106 SER 106 199 199 SER SER A . n A 1 107 GLY 107 200 200 GLY GLY A . n A 1 108 PRO 108 201 201 PRO PRO A . n A 1 109 SER 109 202 202 SER SER A . n A 1 110 SER 110 203 203 SER SER A . n A 1 111 GLY 111 204 204 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_sheet # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 4 'Structure model' '_struct_sheet.number_strands' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; 700 ;SHEET DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 96 ? ? -67.28 92.48 2 1 ASN A 109 ? ? -85.32 44.94 3 1 GLN A 118 ? ? -38.38 -32.33 4 1 ALA A 121 ? ? -64.46 83.79 5 1 TYR A 131 ? ? -103.17 -74.98 6 1 SER A 199 ? ? -38.63 122.37 7 1 SER A 203 ? ? 37.20 40.16 8 2 ALA A 121 ? ? -62.54 85.29 9 2 ARG A 128 ? ? -36.39 144.45 10 2 TYR A 131 ? ? -127.54 -74.18 11 2 CYS A 196 ? ? -174.27 137.97 12 2 SER A 197 ? ? -43.40 152.46 13 2 SER A 202 ? ? -35.16 107.86 14 3 ASN A 109 ? ? -88.25 42.31 15 3 GLN A 118 ? ? -34.93 -32.46 16 3 ALA A 121 ? ? -61.68 87.17 17 3 ARG A 128 ? ? -39.75 143.93 18 3 TYR A 131 ? ? -87.35 -74.67 19 3 GLN A 153 ? ? -83.04 38.37 20 3 ASP A 182 ? ? 44.96 29.05 21 3 TYR A 195 ? ? -62.97 88.88 22 3 SER A 199 ? ? -107.03 -66.40 23 4 GLN A 107 ? ? 34.43 42.14 24 4 TYR A 131 ? ? -131.32 -73.84 25 4 TYR A 198 ? ? -173.69 141.05 26 5 SER A 98 ? ? -51.65 178.37 27 5 ASN A 109 ? ? -89.51 40.02 28 5 GLN A 118 ? ? -39.85 -34.82 29 5 PRO A 129 ? ? -69.79 0.01 30 5 TYR A 131 ? ? -111.96 -72.88 31 5 ASN A 178 ? ? 71.81 35.21 32 5 TYR A 195 ? ? -171.65 135.31 33 5 SER A 199 ? ? -173.95 140.05 34 6 GLN A 107 ? ? -87.30 46.80 35 6 LYS A 108 ? ? -101.24 44.88 36 6 ASN A 109 ? ? -110.41 50.55 37 6 TYR A 131 ? ? -103.34 -69.55 38 6 ASN A 178 ? ? 70.76 47.01 39 7 ALA A 121 ? ? -66.36 83.05 40 7 TYR A 131 ? ? -126.08 -74.26 41 7 ALA A 150 ? ? -83.15 42.21 42 7 ALA A 172 ? ? -38.75 -36.42 43 7 TYR A 195 ? ? -63.90 93.59 44 8 ASN A 109 ? ? -86.69 45.79 45 8 TYR A 131 ? ? -87.64 -74.91 46 8 THR A 147 ? ? -82.94 40.45 47 8 SER A 197 ? ? -65.76 98.38 48 9 SER A 98 ? ? -105.72 -60.34 49 9 ASN A 109 ? ? -86.24 49.58 50 9 ALA A 121 ? ? -65.46 82.99 51 9 ARG A 128 ? ? -35.61 143.28 52 9 TYR A 131 ? ? -117.06 -74.15 53 9 ALA A 150 ? ? -84.44 41.22 54 9 PRO A 155 ? ? -69.75 -173.56 55 9 LYS A 194 ? ? -111.57 -72.18 56 9 SER A 202 ? ? -106.39 75.76 57 10 SER A 95 ? ? -160.78 112.65 58 10 GLN A 107 ? ? -173.82 120.88 59 10 LYS A 108 ? ? -91.85 41.35 60 10 TYR A 131 ? ? -121.00 -74.93 61 10 ASN A 178 ? ? 74.41 52.08 62 10 TYR A 195 ? ? -50.19 98.73 63 11 ALA A 101 ? ? -49.89 166.26 64 11 PRO A 129 ? ? -69.81 1.89 65 11 TYR A 131 ? ? -109.41 -71.17 66 11 SER A 146 ? ? -55.82 170.62 67 12 ASN A 109 ? ? -102.66 42.62 68 12 GLN A 118 ? ? -35.54 -32.06 69 12 ALA A 121 ? ? -66.09 86.79 70 12 ARG A 128 ? ? -39.94 143.87 71 12 PRO A 129 ? ? -69.80 2.94 72 12 TYR A 131 ? ? -86.01 -75.05 73 12 LYS A 194 ? ? -84.19 42.48 74 12 TYR A 195 ? ? 35.66 43.45 75 13 LYS A 108 ? ? -76.70 47.69 76 13 ASN A 109 ? ? -130.48 -37.11 77 13 GLN A 118 ? ? -39.26 -37.71 78 13 ALA A 121 ? ? -66.24 82.99 79 13 TYR A 131 ? ? -88.76 -75.15 80 13 PRO A 155 ? ? -69.73 99.93 81 13 ALA A 172 ? ? -37.67 -35.81 82 13 ASN A 178 ? ? 70.25 45.91 83 13 CYS A 196 ? ? -170.10 130.51 84 13 TYR A 198 ? ? -64.75 92.76 85 14 SER A 98 ? ? -129.34 -59.30 86 14 LYS A 108 ? ? -97.68 59.91 87 14 TYR A 131 ? ? -102.53 -72.06 88 14 CYS A 196 ? ? -37.05 130.19 89 15 GLN A 107 ? ? -37.15 138.23 90 15 LYS A 108 ? ? -97.96 48.83 91 15 ARG A 128 ? ? -38.58 144.60 92 15 PRO A 129 ? ? -69.73 0.50 93 15 TYR A 131 ? ? -111.47 -74.93 94 16 SER A 95 ? ? -169.84 115.78 95 16 SER A 99 ? ? -38.75 -39.66 96 16 SER A 102 ? ? 34.46 39.78 97 16 ASN A 109 ? ? -93.12 39.38 98 16 ALA A 121 ? ? -68.50 83.37 99 16 ARG A 128 ? ? -38.24 143.29 100 16 PRO A 129 ? ? -69.80 1.53 101 16 TYR A 131 ? ? -90.54 -68.27 102 17 SER A 95 ? ? -38.15 107.72 103 17 GLN A 107 ? ? -115.68 78.10 104 17 ASN A 109 ? ? -86.81 38.55 105 17 GLN A 118 ? ? -35.02 -33.02 106 17 ALA A 121 ? ? -60.14 83.48 107 17 PRO A 129 ? ? -69.74 1.35 108 17 TYR A 131 ? ? -72.77 -75.14 109 17 PRO A 155 ? ? -69.79 81.35 110 17 TYR A 195 ? ? 35.00 53.39 111 17 SER A 203 ? ? -58.61 96.43 112 18 VAL A 103 ? ? -65.40 99.04 113 18 LYS A 108 ? ? -89.36 42.72 114 18 ALA A 121 ? ? -60.91 88.12 115 18 TYR A 131 ? ? -80.21 -74.23 116 18 THR A 147 ? ? -128.81 -56.35 117 19 SER A 99 ? ? 37.35 42.20 118 19 ASN A 109 ? ? -101.17 51.70 119 19 PRO A 129 ? ? -69.79 0.80 120 19 TYR A 131 ? ? -75.91 -75.02 121 19 SER A 199 ? ? -127.46 -59.42 122 19 SER A 203 ? ? 38.42 45.39 123 20 SER A 102 ? ? -174.26 149.52 124 20 LYS A 108 ? ? -96.76 35.11 125 20 PRO A 129 ? ? -69.73 1.23 126 20 TYR A 131 ? ? -77.46 -75.11 127 20 THR A 147 ? ? -81.50 44.50 128 20 ASN A 178 ? ? 70.62 52.03 #