data_2CQ1 # _entry.id 2CQ1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQ1 pdb_00002cq1 10.2210/pdb2cq1/pdb RCSB RCSB024492 ? ? WWPDB D_1000024492 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002009793.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQ1 _pdbx_database_status.recvd_initial_deposition_date 2005-05-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tsuda, K.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'solution structure of RNA binding domain in PTB-like protein L' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsuda, K.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'PTB-like protein L' _entity.formula_weight 10872.363 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRN QPIYIQYSNHKELKTSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRN QPIYIQYSNHKELKTSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002009793.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ASP n 1 9 LYS n 1 10 MET n 1 11 ASP n 1 12 GLY n 1 13 ALA n 1 14 PRO n 1 15 SER n 1 16 ARG n 1 17 VAL n 1 18 LEU n 1 19 HIS n 1 20 ILE n 1 21 ARG n 1 22 LYS n 1 23 LEU n 1 24 PRO n 1 25 GLY n 1 26 GLU n 1 27 VAL n 1 28 THR n 1 29 GLU n 1 30 THR n 1 31 GLU n 1 32 VAL n 1 33 ILE n 1 34 ALA n 1 35 LEU n 1 36 GLY n 1 37 LEU n 1 38 PRO n 1 39 PHE n 1 40 GLY n 1 41 LYS n 1 42 VAL n 1 43 THR n 1 44 ASN n 1 45 ILE n 1 46 LEU n 1 47 MET n 1 48 LEU n 1 49 LYS n 1 50 GLY n 1 51 LYS n 1 52 ASN n 1 53 GLN n 1 54 ALA n 1 55 PHE n 1 56 LEU n 1 57 GLU n 1 58 LEU n 1 59 ALA n 1 60 THR n 1 61 GLU n 1 62 GLU n 1 63 ALA n 1 64 ALA n 1 65 ILE n 1 66 THR n 1 67 MET n 1 68 VAL n 1 69 ASN n 1 70 TYR n 1 71 TYR n 1 72 SER n 1 73 ALA n 1 74 VAL n 1 75 THR n 1 76 PRO n 1 77 HIS n 1 78 LEU n 1 79 ARG n 1 80 ASN n 1 81 GLN n 1 82 PRO n 1 83 ILE n 1 84 TYR n 1 85 ILE n 1 86 GLN n 1 87 TYR n 1 88 SER n 1 89 ASN n 1 90 HIS n 1 91 LYS n 1 92 GLU n 1 93 LEU n 1 94 LYS n 1 95 THR n 1 96 SER n 1 97 GLY n 1 98 PRO n 1 99 SER n 1 100 SER n 1 101 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PTBLP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040921-04 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q969N9_HUMAN _struct_ref.pdbx_db_accession Q969N9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQY SNHKELKT ; _struct_ref.pdbx_align_begin 51 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQ1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 95 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q969N9 _struct_ref_seq.db_align_beg 51 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 138 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 51 _struct_ref_seq.pdbx_auth_seq_align_end 138 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQ1 GLY A 1 ? UNP Q969N9 ? ? 'cloning artifact' 44 1 1 2CQ1 SER A 2 ? UNP Q969N9 ? ? 'cloning artifact' 45 2 1 2CQ1 SER A 3 ? UNP Q969N9 ? ? 'cloning artifact' 46 3 1 2CQ1 GLY A 4 ? UNP Q969N9 ? ? 'cloning artifact' 47 4 1 2CQ1 SER A 5 ? UNP Q969N9 ? ? 'cloning artifact' 48 5 1 2CQ1 SER A 6 ? UNP Q969N9 ? ? 'cloning artifact' 49 6 1 2CQ1 GLY A 7 ? UNP Q969N9 ? ? 'cloning artifact' 50 7 1 2CQ1 SER A 96 ? UNP Q969N9 ? ? 'cloning artifact' 139 8 1 2CQ1 GLY A 97 ? UNP Q969N9 ? ? 'cloning artifact' 140 9 1 2CQ1 PRO A 98 ? UNP Q969N9 ? ? 'cloning artifact' 141 10 1 2CQ1 SER A 99 ? UNP Q969N9 ? ? 'cloning artifact' 142 11 1 2CQ1 SER A 100 ? UNP Q969N9 ? ? 'cloning artifact' 143 12 1 2CQ1 GLY A 101 ? UNP Q969N9 ? ? 'cloning artifact' 144 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.34mM 13C/15N-PROTEIN, 20mM d-Tris-HCl (pH 7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CQ1 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CQ1 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQ1 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A' 3 'data analysis' KUJIRA 0.9297 'Kobayashi, N' 4 'structure solution' CYANA 2.0.17 'Guntert, P' 5 refinement CYANA 2.0.17 'Guntert, P' 6 # _exptl.entry_id 2CQ1 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQ1 _struct.title 'solution structure of RNA binding domain in PTB-like protein L' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQ1 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? LEU A 35 ? THR A 71 LEU A 78 1 ? 8 HELX_P HELX_P2 2 THR A 60 ? VAL A 74 ? THR A 103 VAL A 117 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 42 ? LEU A 48 ? VAL A 85 LEU A 91 A 2 GLN A 53 ? LEU A 58 ? GLN A 96 LEU A 101 A 3 VAL A 17 ? ARG A 21 ? VAL A 60 ARG A 64 A 4 TYR A 84 ? TYR A 87 ? TYR A 127 TYR A 130 B 1 HIS A 77 ? LEU A 78 ? HIS A 120 LEU A 121 B 2 GLN A 81 ? PRO A 82 ? GLN A 124 PRO A 125 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 46 ? N LEU A 89 O PHE A 55 ? O PHE A 98 A 2 3 O LEU A 56 ? O LEU A 99 N LEU A 18 ? N LEU A 61 A 3 4 N ARG A 21 ? N ARG A 64 O TYR A 84 ? O TYR A 127 B 1 2 N LEU A 78 ? N LEU A 121 O GLN A 81 ? O GLN A 124 # _database_PDB_matrix.entry_id 2CQ1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQ1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 44 44 GLY GLY A . n A 1 2 SER 2 45 45 SER SER A . n A 1 3 SER 3 46 46 SER SER A . n A 1 4 GLY 4 47 47 GLY GLY A . n A 1 5 SER 5 48 48 SER SER A . n A 1 6 SER 6 49 49 SER SER A . n A 1 7 GLY 7 50 50 GLY GLY A . n A 1 8 ASP 8 51 51 ASP ASP A . n A 1 9 LYS 9 52 52 LYS LYS A . n A 1 10 MET 10 53 53 MET MET A . n A 1 11 ASP 11 54 54 ASP ASP A . n A 1 12 GLY 12 55 55 GLY GLY A . n A 1 13 ALA 13 56 56 ALA ALA A . n A 1 14 PRO 14 57 57 PRO PRO A . n A 1 15 SER 15 58 58 SER SER A . n A 1 16 ARG 16 59 59 ARG ARG A . n A 1 17 VAL 17 60 60 VAL VAL A . n A 1 18 LEU 18 61 61 LEU LEU A . n A 1 19 HIS 19 62 62 HIS HIS A . n A 1 20 ILE 20 63 63 ILE ILE A . n A 1 21 ARG 21 64 64 ARG ARG A . n A 1 22 LYS 22 65 65 LYS LYS A . n A 1 23 LEU 23 66 66 LEU LEU A . n A 1 24 PRO 24 67 67 PRO PRO A . n A 1 25 GLY 25 68 68 GLY GLY A . n A 1 26 GLU 26 69 69 GLU GLU A . n A 1 27 VAL 27 70 70 VAL VAL A . n A 1 28 THR 28 71 71 THR THR A . n A 1 29 GLU 29 72 72 GLU GLU A . n A 1 30 THR 30 73 73 THR THR A . n A 1 31 GLU 31 74 74 GLU GLU A . n A 1 32 VAL 32 75 75 VAL VAL A . n A 1 33 ILE 33 76 76 ILE ILE A . n A 1 34 ALA 34 77 77 ALA ALA A . n A 1 35 LEU 35 78 78 LEU LEU A . n A 1 36 GLY 36 79 79 GLY GLY A . n A 1 37 LEU 37 80 80 LEU LEU A . n A 1 38 PRO 38 81 81 PRO PRO A . n A 1 39 PHE 39 82 82 PHE PHE A . n A 1 40 GLY 40 83 83 GLY GLY A . n A 1 41 LYS 41 84 84 LYS LYS A . n A 1 42 VAL 42 85 85 VAL VAL A . n A 1 43 THR 43 86 86 THR THR A . n A 1 44 ASN 44 87 87 ASN ASN A . n A 1 45 ILE 45 88 88 ILE ILE A . n A 1 46 LEU 46 89 89 LEU LEU A . n A 1 47 MET 47 90 90 MET MET A . n A 1 48 LEU 48 91 91 LEU LEU A . n A 1 49 LYS 49 92 92 LYS LYS A . n A 1 50 GLY 50 93 93 GLY GLY A . n A 1 51 LYS 51 94 94 LYS LYS A . n A 1 52 ASN 52 95 95 ASN ASN A . n A 1 53 GLN 53 96 96 GLN GLN A . n A 1 54 ALA 54 97 97 ALA ALA A . n A 1 55 PHE 55 98 98 PHE PHE A . n A 1 56 LEU 56 99 99 LEU LEU A . n A 1 57 GLU 57 100 100 GLU GLU A . n A 1 58 LEU 58 101 101 LEU LEU A . n A 1 59 ALA 59 102 102 ALA ALA A . n A 1 60 THR 60 103 103 THR THR A . n A 1 61 GLU 61 104 104 GLU GLU A . n A 1 62 GLU 62 105 105 GLU GLU A . n A 1 63 ALA 63 106 106 ALA ALA A . n A 1 64 ALA 64 107 107 ALA ALA A . n A 1 65 ILE 65 108 108 ILE ILE A . n A 1 66 THR 66 109 109 THR THR A . n A 1 67 MET 67 110 110 MET MET A . n A 1 68 VAL 68 111 111 VAL VAL A . n A 1 69 ASN 69 112 112 ASN ASN A . n A 1 70 TYR 70 113 113 TYR TYR A . n A 1 71 TYR 71 114 114 TYR TYR A . n A 1 72 SER 72 115 115 SER SER A . n A 1 73 ALA 73 116 116 ALA ALA A . n A 1 74 VAL 74 117 117 VAL VAL A . n A 1 75 THR 75 118 118 THR THR A . n A 1 76 PRO 76 119 119 PRO PRO A . n A 1 77 HIS 77 120 120 HIS HIS A . n A 1 78 LEU 78 121 121 LEU LEU A . n A 1 79 ARG 79 122 122 ARG ARG A . n A 1 80 ASN 80 123 123 ASN ASN A . n A 1 81 GLN 81 124 124 GLN GLN A . n A 1 82 PRO 82 125 125 PRO PRO A . n A 1 83 ILE 83 126 126 ILE ILE A . n A 1 84 TYR 84 127 127 TYR TYR A . n A 1 85 ILE 85 128 128 ILE ILE A . n A 1 86 GLN 86 129 129 GLN GLN A . n A 1 87 TYR 87 130 130 TYR TYR A . n A 1 88 SER 88 131 131 SER SER A . n A 1 89 ASN 89 132 132 ASN ASN A . n A 1 90 HIS 90 133 133 HIS HIS A . n A 1 91 LYS 91 134 134 LYS LYS A . n A 1 92 GLU 92 135 135 GLU GLU A . n A 1 93 LEU 93 136 136 LEU LEU A . n A 1 94 LYS 94 137 137 LYS LYS A . n A 1 95 THR 95 138 138 THR THR A . n A 1 96 SER 96 139 139 SER SER A . n A 1 97 GLY 97 140 140 GLY GLY A . n A 1 98 PRO 98 141 141 PRO PRO A . n A 1 99 SER 99 142 142 SER SER A . n A 1 100 SER 100 143 143 SER SER A . n A 1 101 GLY 101 144 144 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 48 ? ? -170.63 129.99 2 1 ALA A 56 ? ? -119.20 73.71 3 1 PRO A 57 ? ? -45.80 155.95 4 1 THR A 138 ? ? -134.36 -40.72 5 1 SER A 143 ? ? -134.98 -42.90 6 2 GLU A 72 ? ? -35.69 -39.57 7 2 THR A 138 ? ? 70.49 44.34 8 3 SER A 45 ? ? 38.61 43.33 9 3 ASP A 51 ? ? -51.96 104.50 10 3 LYS A 52 ? ? -50.87 179.49 11 3 ASP A 54 ? ? -56.50 81.65 12 3 PRO A 67 ? ? -47.44 161.58 13 3 GLU A 69 ? ? 73.80 46.55 14 3 ASN A 95 ? ? -87.87 42.36 15 3 SER A 115 ? ? -39.27 -32.21 16 3 LYS A 134 ? ? 30.39 41.38 17 3 GLU A 135 ? ? -171.52 132.26 18 3 LYS A 137 ? ? -51.73 173.35 19 3 PRO A 141 ? ? -45.83 167.74 20 4 PRO A 67 ? ? -46.87 160.24 21 4 ASN A 95 ? ? -106.67 49.10 22 4 SER A 115 ? ? -38.73 -31.74 23 4 ASN A 123 ? ? 73.08 35.17 24 4 LYS A 134 ? ? 34.40 36.53 25 4 LEU A 136 ? ? -69.33 93.49 26 4 PRO A 141 ? ? -45.63 161.12 27 5 ASP A 51 ? ? -58.99 176.96 28 5 PRO A 57 ? ? -46.06 153.04 29 5 PRO A 125 ? ? -47.80 165.93 30 6 ALA A 56 ? ? -114.14 76.11 31 6 PRO A 57 ? ? -45.23 101.93 32 6 ARG A 59 ? ? -87.18 32.18 33 6 TYR A 113 ? ? -36.76 -35.13 34 6 SER A 115 ? ? -38.30 -38.95 35 6 HIS A 120 ? ? -160.89 119.97 36 6 PRO A 141 ? ? -74.54 47.17 37 7 SER A 49 ? ? -67.53 90.12 38 7 PRO A 57 ? ? -48.68 -176.75 39 7 PRO A 67 ? ? -47.07 158.82 40 7 THR A 73 ? ? -35.66 -33.50 41 7 HIS A 120 ? ? -161.10 118.14 42 7 ASN A 123 ? ? 70.78 31.32 43 7 ASN A 132 ? ? -95.97 -64.69 44 7 HIS A 133 ? ? -121.79 -72.74 45 7 LYS A 134 ? ? 38.95 47.00 46 7 GLU A 135 ? ? -61.96 87.18 47 7 LYS A 137 ? ? -67.16 92.15 48 7 PRO A 141 ? ? -77.04 40.99 49 8 ASP A 51 ? ? -106.00 42.73 50 8 ALA A 56 ? ? -172.88 105.01 51 8 PRO A 57 ? ? -47.35 166.68 52 8 PRO A 67 ? ? -48.01 170.38 53 8 GLU A 72 ? ? -37.43 -37.02 54 8 LYS A 94 ? ? -36.69 140.44 55 8 HIS A 120 ? ? -160.60 115.78 56 8 PRO A 141 ? ? -45.57 97.82 57 9 ALA A 56 ? ? -117.56 72.56 58 9 PRO A 67 ? ? -47.70 153.33 59 9 TYR A 113 ? ? -39.18 -36.12 60 9 SER A 115 ? ? -35.14 -38.87 61 9 LYS A 137 ? ? -168.54 119.06 62 9 SER A 139 ? ? -49.23 157.97 63 10 PRO A 57 ? ? -45.69 106.98 64 10 PRO A 67 ? ? -47.78 161.85 65 10 HIS A 120 ? ? -160.04 118.40 66 10 PRO A 125 ? ? -48.23 163.08 67 10 SER A 143 ? ? -117.12 51.80 68 11 PRO A 57 ? ? -45.94 171.02 69 11 SER A 115 ? ? -36.65 -38.80 70 11 LYS A 134 ? ? -95.03 42.17 71 12 PRO A 67 ? ? -46.90 165.62 72 12 THR A 73 ? ? -38.99 -39.37 73 12 SER A 115 ? ? -37.81 -32.15 74 12 GLU A 135 ? ? -51.77 177.15 75 12 PRO A 141 ? ? -79.69 34.08 76 13 SER A 45 ? ? -131.69 -55.07 77 13 SER A 46 ? ? 35.08 42.20 78 13 LYS A 52 ? ? -47.67 162.69 79 13 MET A 53 ? ? -57.76 175.90 80 13 ALA A 56 ? ? -173.64 104.93 81 13 PRO A 57 ? ? -45.64 171.14 82 13 TYR A 113 ? ? -37.84 -38.59 83 13 SER A 115 ? ? -35.02 -39.73 84 13 HIS A 120 ? ? -162.57 119.22 85 13 PRO A 125 ? ? -43.39 151.98 86 13 HIS A 133 ? ? 34.82 40.41 87 14 MET A 53 ? ? -99.36 43.84 88 14 ASP A 54 ? ? -40.44 107.51 89 14 PRO A 125 ? ? -43.53 153.32 90 14 GLU A 135 ? ? -174.65 133.95 91 14 PRO A 141 ? ? -42.85 158.18 92 15 ALA A 56 ? ? -115.33 77.53 93 15 PRO A 57 ? ? -45.87 152.00 94 15 ASN A 95 ? ? -168.33 104.98 95 15 TYR A 113 ? ? -37.47 -38.70 96 15 SER A 115 ? ? -36.24 -39.10 97 15 HIS A 120 ? ? -161.33 119.33 98 16 SER A 48 ? ? -93.04 42.19 99 16 PRO A 57 ? ? -45.69 152.36 100 16 PRO A 125 ? ? -42.30 152.35 101 16 SER A 131 ? ? -55.18 178.21 102 16 LYS A 134 ? ? -79.69 47.24 103 16 LEU A 136 ? ? -35.03 120.17 104 16 SER A 139 ? ? -49.89 151.55 105 17 PRO A 57 ? ? -45.64 165.59 106 17 PRO A 67 ? ? -46.30 154.68 107 17 ASN A 95 ? ? -170.68 106.47 108 17 SER A 115 ? ? -35.48 -39.86 109 17 PRO A 125 ? ? -43.85 157.81 110 17 LYS A 134 ? ? -81.72 47.66 111 18 SER A 45 ? ? -107.27 -60.97 112 18 ALA A 56 ? ? 73.18 54.65 113 18 PRO A 57 ? ? -44.66 151.03 114 18 ASN A 95 ? ? -108.58 44.88 115 18 TYR A 113 ? ? -38.34 -38.78 116 18 HIS A 120 ? ? -161.99 108.75 117 18 HIS A 133 ? ? -38.61 146.12 118 18 LYS A 137 ? ? 34.24 42.32 119 18 PRO A 141 ? ? -77.78 40.83 120 19 SER A 46 ? ? -98.73 39.68 121 19 ALA A 56 ? ? -116.82 74.90 122 19 ASN A 95 ? ? -92.64 44.52 123 19 SER A 115 ? ? -37.44 -31.71 124 19 SER A 139 ? ? -43.25 150.76 125 20 SER A 48 ? ? 38.15 42.26 126 20 PRO A 57 ? ? -45.49 161.18 127 20 GLN A 129 ? ? -171.49 -177.94 128 20 LEU A 136 ? ? -108.93 59.53 #