HEADER RNA BINDING PROTEIN 19-MAY-05 2CQ2 TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN HYPOTHETICAL PROTEIN TITLE 2 LOC91801 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN LOC91801; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 SYNONYM: HYPOTHETICAL PROTEIN BC015183; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LOC9180; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041012-04; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CQ2 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CQ2 1 VERSN REVDAT 1 19-NOV-05 2CQ2 0 JRNL AUTH K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN HYPOTHETICAL JRNL TITL 2 PROTEIN LOC91801 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CQ2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024493. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.16MM 13C/15N-PROTEIN, 20MM D REMARK 210 -TRIS-HCL (PH 7.0), 100MM NACL, REMARK 210 1MM D-DTT, 0.02% NAN3, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9297, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 25 -175.97 -65.11 REMARK 500 1 LEU A 29 -34.72 -33.45 REMARK 500 1 HIS A 32 -70.79 -55.99 REMARK 500 1 GLU A 33 -38.39 -36.52 REMARK 500 1 TYR A 40 -178.18 -68.01 REMARK 500 1 GLN A 43 -36.84 -37.17 REMARK 500 1 ASN A 54 33.16 -88.95 REMARK 500 1 THR A 99 -62.83 -99.99 REMARK 500 1 GLN A 124 75.98 -66.49 REMARK 500 1 SER A 126 43.62 -93.12 REMARK 500 2 THR A 28 30.88 -84.52 REMARK 500 2 ASN A 54 34.28 -92.35 REMARK 500 2 THR A 99 -63.77 -96.48 REMARK 500 2 ASP A 107 -175.46 -65.36 REMARK 500 2 SER A 126 137.38 -175.02 REMARK 500 2 SER A 129 99.01 -37.89 REMARK 500 3 ASN A 54 33.65 -86.26 REMARK 500 3 THR A 99 -60.60 -91.86 REMARK 500 3 ASN A 101 107.57 -44.64 REMARK 500 3 GLN A 124 73.39 -69.63 REMARK 500 4 ALA A 25 -175.09 -53.00 REMARK 500 4 LEU A 29 -37.53 -35.39 REMARK 500 4 GLN A 43 -32.59 -39.80 REMARK 500 4 ASN A 54 32.01 -91.71 REMARK 500 4 THR A 99 -63.72 -92.15 REMARK 500 4 GLN A 124 70.98 -69.09 REMARK 500 5 THR A 28 31.25 -98.40 REMARK 500 5 ASN A 54 34.98 -90.70 REMARK 500 5 THR A 99 -64.03 -99.11 REMARK 500 5 GLN A 124 77.63 -63.08 REMARK 500 6 SER A 20 -45.84 -130.31 REMARK 500 6 LEU A 29 -38.59 -33.92 REMARK 500 6 HIS A 32 -74.72 -46.17 REMARK 500 6 THR A 99 -62.07 -93.75 REMARK 500 6 GLN A 124 72.79 -66.22 REMARK 500 6 PRO A 128 93.17 -69.77 REMARK 500 7 SER A 22 42.71 34.61 REMARK 500 7 SER A 23 41.79 -99.33 REMARK 500 7 ALA A 25 138.29 -36.20 REMARK 500 7 ASN A 49 26.61 48.25 REMARK 500 7 ASN A 54 32.28 -88.42 REMARK 500 7 THR A 99 -62.90 -98.60 REMARK 500 7 ASP A 107 -176.46 -67.42 REMARK 500 7 GLN A 124 77.79 -60.65 REMARK 500 7 SER A 129 153.75 -46.61 REMARK 500 8 SER A 19 131.96 -35.24 REMARK 500 8 SER A 20 144.12 -171.79 REMARK 500 8 SER A 22 51.94 37.49 REMARK 500 8 ALA A 25 -73.21 -71.53 REMARK 500 8 LYS A 26 52.52 36.17 REMARK 500 REMARK 500 THIS ENTRY HAS 122 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002010820.1 RELATED DB: TARGETDB DBREF 2CQ2 A 25 125 UNP Q8N989 Q8N989_HUMAN 25 125 SEQADV 2CQ2 GLY A 18 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 19 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 20 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 21 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 22 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 23 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 24 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 126 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 127 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 PRO A 128 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 129 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 130 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 131 UNP Q8N989 CLONING ARTIFACT SEQRES 1 A 114 GLY SER SER GLY SER SER GLY ALA LYS HIS THR LEU LEU SEQRES 2 A 114 ARG HIS GLU GLY ILE GLU THR VAL SER TYR ALA THR GLN SEQRES 3 A 114 SER LEU VAL VAL ALA ASN GLY GLY LEU GLY ASN GLY VAL SEQRES 4 A 114 SER ARG ASN GLN LEU LEU PRO VAL LEU GLU LYS CYS GLY SEQRES 5 A 114 LEU VAL ASP ALA LEU LEU MET PRO PRO ASN LYS PRO TYR SEQRES 6 A 114 SER PHE ALA ARG TYR ARG THR THR GLU GLU SER LYS ARG SEQRES 7 A 114 ALA TYR VAL THR LEU ASN GLY LYS GLU VAL VAL ASP ASP SEQRES 8 A 114 LEU GLY GLN LYS ILE THR LEU TYR LEU ASN PHE VAL GLU SEQRES 9 A 114 LYS VAL GLN TRP SER GLY PRO SER SER GLY HELIX 1 1 THR A 28 GLY A 34 1 7 HELIX 2 2 GLY A 51 GLY A 55 5 5 HELIX 3 3 SER A 57 GLY A 69 1 13 HELIX 4 4 THR A 89 LEU A 100 1 12 SHEET 1 A 4 VAL A 71 LEU A 75 0 SHEET 2 A 4 SER A 83 TYR A 87 -1 O PHE A 84 N LEU A 75 SHEET 3 A 4 SER A 44 ALA A 48 -1 N LEU A 45 O ALA A 85 SHEET 4 A 4 TYR A 116 VAL A 120 -1 O TYR A 116 N ALA A 48 SHEET 1 B 2 GLU A 104 VAL A 106 0 SHEET 2 B 2 LYS A 112 THR A 114 -1 O ILE A 113 N VAL A 105 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1