HEADER TRANSCRIPTION 19-MAY-05 2CQE TITLE SOLUTION STRUCTURE OF THE ZINC-FINGER DOMAIN IN KIAA1064 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA1064 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC-FINGER DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C19ORF7; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041012-01; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS CCCH ZINC-FINGER, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.SOMEYA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CQE 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2CQE 1 VERSN REVDAT 1 19-NOV-05 2CQE 0 JRNL AUTH T.SOMEYA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE ZINC-FINGER DOMAIN IN KIAA1064 JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CQE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024505. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.34MM PROTEIN U-15N,13C; 20MM D REMARK 210 -TRIS-HCL; 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3; 0.05MM ZNCL2; 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 431 80.38 -69.82 REMARK 500 1 ARG A 434 43.01 -100.15 REMARK 500 1 ALA A 448 -76.85 -81.14 REMARK 500 1 PRO A 452 1.50 -69.71 REMARK 500 1 HIS A 455 -77.87 -120.51 REMARK 500 1 TYR A 463 -25.09 -39.61 REMARK 500 1 ASP A 474 44.41 -104.18 REMARK 500 1 GLU A 484 -31.32 -39.95 REMARK 500 1 GLU A 485 -74.13 -80.01 REMARK 500 1 GLU A 505 160.18 -49.04 REMARK 500 1 LYS A 512 107.58 -169.33 REMARK 500 1 PRO A 516 -173.46 -69.69 REMARK 500 2 SER A 423 136.89 -34.88 REMARK 500 2 PRO A 431 -91.08 -69.77 REMARK 500 2 ALA A 448 -76.34 -80.18 REMARK 500 2 PRO A 452 0.26 -69.74 REMARK 500 2 HIS A 455 -75.85 -120.03 REMARK 500 2 ASP A 457 -35.53 -34.50 REMARK 500 2 THR A 466 -32.75 -132.93 REMARK 500 2 ASP A 474 46.92 -104.90 REMARK 500 2 GLU A 484 -29.44 -38.69 REMARK 500 2 GLU A 485 -75.77 -81.24 REMARK 500 2 ARG A 487 -36.50 -39.09 REMARK 500 2 LYS A 512 41.92 34.95 REMARK 500 3 SER A 423 117.65 -39.57 REMARK 500 3 ARG A 434 44.67 -105.53 REMARK 500 3 ALA A 446 -70.20 -41.56 REMARK 500 3 ALA A 448 -75.32 -79.93 REMARK 500 3 HIS A 455 -78.34 -113.17 REMARK 500 3 TYR A 463 -25.03 -39.67 REMARK 500 3 ASP A 474 42.70 -101.41 REMARK 500 3 LEU A 482 150.92 -40.98 REMARK 500 3 GLU A 485 -74.69 -80.16 REMARK 500 3 LYS A 512 43.37 -85.04 REMARK 500 3 LYS A 513 105.05 -47.22 REMARK 500 3 SER A 518 170.67 -58.46 REMARK 500 4 SER A 424 175.32 -58.28 REMARK 500 4 PRO A 431 2.57 -69.65 REMARK 500 4 ALA A 446 -75.61 -39.91 REMARK 500 4 ARG A 447 82.71 -67.69 REMARK 500 4 HIS A 455 -77.69 -122.57 REMARK 500 4 ASP A 457 -39.41 -34.73 REMARK 500 4 ASP A 474 44.47 -101.47 REMARK 500 4 GLU A 485 -77.00 -81.26 REMARK 500 4 LEU A 494 -73.87 -45.27 REMARK 500 4 ALA A 500 40.64 -84.30 REMARK 500 4 LYS A 506 148.01 -34.90 REMARK 500 4 GLU A 510 -75.50 -84.94 REMARK 500 4 PRO A 516 -179.08 -69.76 REMARK 500 5 SER A 424 110.06 -166.65 REMARK 500 REMARK 500 THIS ENTRY HAS 268 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 622 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 437 SG REMARK 620 2 CYS A 445 SG 116.8 REMARK 620 3 CYS A 451 SG 97.8 116.5 REMARK 620 4 HIS A 455 NE2 114.8 118.4 86.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 822 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 460 SG REMARK 620 2 CYS A 469 SG 109.7 REMARK 620 3 CYS A 475 SG 118.6 96.3 REMARK 620 4 HIS A 479 NE2 114.1 114.7 102.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 622 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 822 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002101040.1 RELATED DB: TARGETDB DBREF 2CQE A 429 513 UNP Q9UPT8 Q9UPT8_HUMAN 429 513 SEQADV 2CQE GLY A 422 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 423 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 424 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE GLY A 425 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 426 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 427 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE GLY A 428 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 514 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE GLY A 515 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE PRO A 516 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 517 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE SER A 518 UNP Q9UPT8 CLONING ARTIFACT SEQADV 2CQE GLY A 519 UNP Q9UPT8 CLONING ARTIFACT SEQRES 1 A 98 GLY SER SER GLY SER SER GLY GLU LEU PRO LYS LYS ARG SEQRES 2 A 98 GLU LEU CYS LYS PHE TYR ILE THR GLY PHE CYS ALA ARG SEQRES 3 A 98 ALA GLU ASN CYS PRO TYR MET HIS GLY ASP PHE PRO CYS SEQRES 4 A 98 LYS LEU TYR HIS THR THR GLY ASN CYS ILE ASN GLY ASP SEQRES 5 A 98 ASP CYS MET PHE SER HIS ASP PRO LEU THR GLU GLU THR SEQRES 6 A 98 ARG GLU LEU LEU ASP LYS MET LEU ALA ASP ASP ALA GLU SEQRES 7 A 98 ALA GLY ALA GLU ASP GLU LYS GLU VAL GLU GLU LEU LYS SEQRES 8 A 98 LYS SER GLY PRO SER SER GLY HET ZN A 622 1 HET ZN A 822 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 LYS A 461 THR A 466 1 6 HELIX 2 2 THR A 486 GLU A 499 1 14 LINK SG CYS A 437 ZN ZN A 622 1555 1555 2.37 LINK SG CYS A 445 ZN ZN A 622 1555 1555 2.33 LINK SG CYS A 451 ZN ZN A 622 1555 1555 2.34 LINK NE2 HIS A 455 ZN ZN A 622 1555 1555 2.33 LINK SG CYS A 460 ZN ZN A 822 1555 1555 2.33 LINK SG CYS A 469 ZN ZN A 822 1555 1555 2.33 LINK SG CYS A 475 ZN ZN A 822 1555 1555 2.33 LINK NE2 HIS A 479 ZN ZN A 822 1555 1555 2.33 SITE 1 AC1 4 CYS A 437 CYS A 445 CYS A 451 HIS A 455 SITE 1 AC2 4 CYS A 460 CYS A 469 CYS A 475 HIS A 479 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1