data_2CQG # _entry.id 2CQG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQG pdb_00002cqg 10.2210/pdb2cqg/pdb RCSB RCSB024507 ? ? WWPDB D_1000024507 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001001612 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQG _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Suzuki, S.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the RNA binding domain of TAR DNA-binding protein-43' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, S.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'TAR DNA-binding protein-43' _entity.formula_weight 11465.996 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name TDP-43 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMI DGRWCDCKLPNSKQSQDSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMI DGRWCDCKLPNSKQSQDSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001001612 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 VAL n 1 9 LYS n 1 10 ARG n 1 11 ALA n 1 12 VAL n 1 13 GLN n 1 14 LYS n 1 15 THR n 1 16 SER n 1 17 ASP n 1 18 LEU n 1 19 ILE n 1 20 VAL n 1 21 LEU n 1 22 GLY n 1 23 LEU n 1 24 PRO n 1 25 TRP n 1 26 LYS n 1 27 THR n 1 28 THR n 1 29 GLU n 1 30 GLN n 1 31 ASP n 1 32 LEU n 1 33 LYS n 1 34 GLU n 1 35 TYR n 1 36 PHE n 1 37 SER n 1 38 THR n 1 39 PHE n 1 40 GLY n 1 41 GLU n 1 42 VAL n 1 43 LEU n 1 44 MET n 1 45 VAL n 1 46 GLN n 1 47 VAL n 1 48 LYS n 1 49 LYS n 1 50 ASP n 1 51 LEU n 1 52 LYS n 1 53 THR n 1 54 GLY n 1 55 HIS n 1 56 SER n 1 57 LYS n 1 58 GLY n 1 59 PHE n 1 60 GLY n 1 61 PHE n 1 62 VAL n 1 63 ARG n 1 64 PHE n 1 65 THR n 1 66 GLU n 1 67 TYR n 1 68 GLU n 1 69 THR n 1 70 GLN n 1 71 VAL n 1 72 LYS n 1 73 VAL n 1 74 MET n 1 75 SER n 1 76 GLN n 1 77 ARG n 1 78 HIS n 1 79 MET n 1 80 ILE n 1 81 ASP n 1 82 GLY n 1 83 ARG n 1 84 TRP n 1 85 CYS n 1 86 ASP n 1 87 CYS n 1 88 LYS n 1 89 LEU n 1 90 PRO n 1 91 ASN n 1 92 SER n 1 93 LYS n 1 94 GLN n 1 95 SER n 1 96 GLN n 1 97 ASP n 1 98 SER n 1 99 GLY n 1 100 PRO n 1 101 SER n 1 102 SER n 1 103 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene TARDBP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040524-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TADBP_HUMAN _struct_ref.pdbx_db_accession Q13148 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDC KLPNSKQSQD ; _struct_ref.pdbx_align_begin 96 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13148 _struct_ref_seq.db_align_beg 96 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 185 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 96 _struct_ref_seq.pdbx_auth_seq_align_end 185 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQG GLY A 1 ? UNP Q13148 ? ? 'cloning artifact' 89 1 1 2CQG SER A 2 ? UNP Q13148 ? ? 'cloning artifact' 90 2 1 2CQG SER A 3 ? UNP Q13148 ? ? 'cloning artifact' 91 3 1 2CQG GLY A 4 ? UNP Q13148 ? ? 'cloning artifact' 92 4 1 2CQG SER A 5 ? UNP Q13148 ? ? 'cloning artifact' 93 5 1 2CQG SER A 6 ? UNP Q13148 ? ? 'cloning artifact' 94 6 1 2CQG GLY A 7 ? UNP Q13148 ? ? 'cloning artifact' 95 7 1 2CQG SER A 98 ? UNP Q13148 ? ? 'cloning artifact' 186 8 1 2CQG GLY A 99 ? UNP Q13148 ? ? 'cloning artifact' 187 9 1 2CQG PRO A 100 ? UNP Q13148 ? ? 'cloning artifact' 188 10 1 2CQG SER A 101 ? UNP Q13148 ? ? 'cloning artifact' 189 11 1 2CQG SER A 102 ? UNP Q13148 ? ? 'cloning artifact' 190 12 1 2CQG GLY A 103 ? UNP Q13148 ? ? 'cloning artifact' 191 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.86mM 13C/15N-PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CQG _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2CQG _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 2CQG _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQG _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9295 'Kobayashi, N.' 4 'data analysis' Olivia 1.10.5 'Yokochi, M.' 5 'structure solution' CYANA 2.0.17 'Guntert, P.' 6 refinement CYANA 2.0.17 'Guntert, P.' 7 # _exptl.entry_id 2CQG _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQG _struct.title 'Solution structure of the RNA binding domain of TAR DNA-binding protein-43' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQG _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA recognition motif, RRM, RNA binding domain, RBD, RNP, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA Binding Protein ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 29 ? PHE A 39 ? GLU A 117 PHE A 127 1 ? 11 HELX_P HELX_P2 3 TYR A 67 ? SER A 75 ? TYR A 155 SER A 163 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 18 ? LEU A 21 ? LEU A 106 LEU A 109 A 2 MET A 44 ? LYS A 48 ? MET A 132 LYS A 136 A 3 PHE A 59 ? ARG A 63 ? PHE A 147 ARG A 151 A 4 ARG A 83 ? CYS A 85 ? ARG A 171 CYS A 173 A 5 ASP A 86 ? LYS A 88 ? ASP A 174 LYS A 176 # _database_PDB_matrix.entry_id 2CQG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQG _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 89 89 GLY GLY A . n A 1 2 SER 2 90 90 SER SER A . n A 1 3 SER 3 91 91 SER SER A . n A 1 4 GLY 4 92 92 GLY GLY A . n A 1 5 SER 5 93 93 SER SER A . n A 1 6 SER 6 94 94 SER SER A . n A 1 7 GLY 7 95 95 GLY GLY A . n A 1 8 VAL 8 96 96 VAL VAL A . n A 1 9 LYS 9 97 97 LYS LYS A . n A 1 10 ARG 10 98 98 ARG ARG A . n A 1 11 ALA 11 99 99 ALA ALA A . n A 1 12 VAL 12 100 100 VAL VAL A . n A 1 13 GLN 13 101 101 GLN GLN A . n A 1 14 LYS 14 102 102 LYS LYS A . n A 1 15 THR 15 103 103 THR THR A . n A 1 16 SER 16 104 104 SER SER A . n A 1 17 ASP 17 105 105 ASP ASP A . n A 1 18 LEU 18 106 106 LEU LEU A . n A 1 19 ILE 19 107 107 ILE ILE A . n A 1 20 VAL 20 108 108 VAL VAL A . n A 1 21 LEU 21 109 109 LEU LEU A . n A 1 22 GLY 22 110 110 GLY GLY A . n A 1 23 LEU 23 111 111 LEU LEU A . n A 1 24 PRO 24 112 112 PRO PRO A . n A 1 25 TRP 25 113 113 TRP TRP A . n A 1 26 LYS 26 114 114 LYS LYS A . n A 1 27 THR 27 115 115 THR THR A . n A 1 28 THR 28 116 116 THR THR A . n A 1 29 GLU 29 117 117 GLU GLU A . n A 1 30 GLN 30 118 118 GLN GLN A . n A 1 31 ASP 31 119 119 ASP ASP A . n A 1 32 LEU 32 120 120 LEU LEU A . n A 1 33 LYS 33 121 121 LYS LYS A . n A 1 34 GLU 34 122 122 GLU GLU A . n A 1 35 TYR 35 123 123 TYR TYR A . n A 1 36 PHE 36 124 124 PHE PHE A . n A 1 37 SER 37 125 125 SER SER A . n A 1 38 THR 38 126 126 THR THR A . n A 1 39 PHE 39 127 127 PHE PHE A . n A 1 40 GLY 40 128 128 GLY GLY A . n A 1 41 GLU 41 129 129 GLU GLU A . n A 1 42 VAL 42 130 130 VAL VAL A . n A 1 43 LEU 43 131 131 LEU LEU A . n A 1 44 MET 44 132 132 MET MET A . n A 1 45 VAL 45 133 133 VAL VAL A . n A 1 46 GLN 46 134 134 GLN GLN A . n A 1 47 VAL 47 135 135 VAL VAL A . n A 1 48 LYS 48 136 136 LYS LYS A . n A 1 49 LYS 49 137 137 LYS LYS A . n A 1 50 ASP 50 138 138 ASP ASP A . n A 1 51 LEU 51 139 139 LEU LEU A . n A 1 52 LYS 52 140 140 LYS LYS A . n A 1 53 THR 53 141 141 THR THR A . n A 1 54 GLY 54 142 142 GLY GLY A . n A 1 55 HIS 55 143 143 HIS HIS A . n A 1 56 SER 56 144 144 SER SER A . n A 1 57 LYS 57 145 145 LYS LYS A . n A 1 58 GLY 58 146 146 GLY GLY A . n A 1 59 PHE 59 147 147 PHE PHE A . n A 1 60 GLY 60 148 148 GLY GLY A . n A 1 61 PHE 61 149 149 PHE PHE A . n A 1 62 VAL 62 150 150 VAL VAL A . n A 1 63 ARG 63 151 151 ARG ARG A . n A 1 64 PHE 64 152 152 PHE PHE A . n A 1 65 THR 65 153 153 THR THR A . n A 1 66 GLU 66 154 154 GLU GLU A . n A 1 67 TYR 67 155 155 TYR TYR A . n A 1 68 GLU 68 156 156 GLU GLU A . n A 1 69 THR 69 157 157 THR THR A . n A 1 70 GLN 70 158 158 GLN GLN A . n A 1 71 VAL 71 159 159 VAL VAL A . n A 1 72 LYS 72 160 160 LYS LYS A . n A 1 73 VAL 73 161 161 VAL VAL A . n A 1 74 MET 74 162 162 MET MET A . n A 1 75 SER 75 163 163 SER SER A . n A 1 76 GLN 76 164 164 GLN GLN A . n A 1 77 ARG 77 165 165 ARG ARG A . n A 1 78 HIS 78 166 166 HIS HIS A . n A 1 79 MET 79 167 167 MET MET A . n A 1 80 ILE 80 168 168 ILE ILE A . n A 1 81 ASP 81 169 169 ASP ASP A . n A 1 82 GLY 82 170 170 GLY GLY A . n A 1 83 ARG 83 171 171 ARG ARG A . n A 1 84 TRP 84 172 172 TRP TRP A . n A 1 85 CYS 85 173 173 CYS CYS A . n A 1 86 ASP 86 174 174 ASP ASP A . n A 1 87 CYS 87 175 175 CYS CYS A . n A 1 88 LYS 88 176 176 LYS LYS A . n A 1 89 LEU 89 177 177 LEU LEU A . n A 1 90 PRO 90 178 178 PRO PRO A . n A 1 91 ASN 91 179 179 ASN ASN A . n A 1 92 SER 92 180 180 SER SER A . n A 1 93 LYS 93 181 181 LYS LYS A . n A 1 94 GLN 94 182 182 GLN GLN A . n A 1 95 SER 95 183 183 SER SER A . n A 1 96 GLN 96 184 184 GLN GLN A . n A 1 97 ASP 97 185 185 ASP ASP A . n A 1 98 SER 98 186 186 SER SER A . n A 1 99 GLY 99 187 187 GLY GLY A . n A 1 100 PRO 100 188 188 PRO PRO A . n A 1 101 SER 101 189 189 SER SER A . n A 1 102 SER 102 190 190 SER SER A . n A 1 103 GLY 103 191 191 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; 700 ;SHEET DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 91 ? ? -170.82 134.63 2 1 LYS A 97 ? ? -38.63 101.05 3 1 THR A 103 ? ? -34.08 141.95 4 2 THR A 103 ? ? -43.99 153.01 5 2 PRO A 112 ? ? -69.74 -175.66 6 2 SER A 163 ? ? -75.19 -72.25 7 2 PRO A 178 ? ? -69.72 2.86 8 2 ASN A 179 ? ? -38.16 -36.91 9 2 SER A 180 ? ? -79.26 46.28 10 2 LYS A 181 ? ? 37.69 37.37 11 2 GLN A 182 ? ? -90.70 38.28 12 3 GLN A 101 ? ? -174.77 132.26 13 3 SER A 144 ? ? -39.08 141.86 14 3 PRO A 178 ? ? -69.74 2.88 15 3 ASN A 179 ? ? -34.37 -38.44 16 4 PRO A 178 ? ? -69.84 2.84 17 4 ASN A 179 ? ? -38.54 -39.03 18 5 VAL A 96 ? ? -95.01 40.72 19 5 PRO A 178 ? ? -69.78 2.94 20 5 GLN A 182 ? ? -126.32 -70.50 21 6 SER A 90 ? ? -162.81 107.88 22 6 ALA A 99 ? ? -35.16 139.87 23 6 PRO A 112 ? ? -69.73 -178.60 24 6 LYS A 140 ? ? -38.17 -34.78 25 6 PRO A 178 ? ? -69.77 1.91 26 6 ASN A 179 ? ? -46.13 169.28 27 6 SER A 180 ? ? 70.16 38.88 28 6 PRO A 188 ? ? -69.74 94.75 29 7 SER A 91 ? ? -60.26 95.74 30 7 THR A 103 ? ? -39.56 138.49 31 7 PRO A 112 ? ? -69.70 -164.99 32 7 THR A 141 ? ? -128.80 -51.79 33 7 LYS A 181 ? ? 34.59 47.95 34 7 SER A 183 ? ? -91.82 42.57 35 7 SER A 190 ? ? -101.54 -60.70 36 8 SER A 94 ? ? -131.44 -42.89 37 8 THR A 103 ? ? -46.17 108.37 38 8 SER A 163 ? ? -56.72 -74.53 39 8 GLN A 182 ? ? -58.95 105.34 40 8 SER A 190 ? ? -128.37 -50.04 41 9 PRO A 112 ? ? -69.75 -166.81 42 9 LYS A 140 ? ? -34.20 -36.09 43 10 VAL A 96 ? ? -173.08 126.26 44 10 PRO A 112 ? ? -69.76 -165.81 45 10 ARG A 165 ? ? -59.26 -175.47 46 11 LYS A 97 ? ? -34.94 148.07 47 11 ALA A 99 ? ? 71.18 37.49 48 11 SER A 189 ? ? -46.65 99.31 49 12 VAL A 100 ? ? -82.66 46.29 50 12 THR A 141 ? ? -109.79 -60.02 51 12 GLN A 182 ? ? -60.41 -71.39 52 12 ASP A 185 ? ? -67.26 98.21 53 12 SER A 190 ? ? 34.87 42.45 54 13 VAL A 96 ? ? -123.25 -59.89 55 13 THR A 103 ? ? -35.07 141.25 56 13 VAL A 130 ? ? -38.97 135.14 57 13 ASN A 179 ? ? 34.50 39.39 58 14 PRO A 178 ? ? -69.76 -164.36 59 14 ASN A 179 ? ? 34.47 44.16 60 14 SER A 180 ? ? -171.93 115.70 61 15 SER A 90 ? ? -131.02 -54.05 62 15 ARG A 98 ? ? -105.53 42.35 63 15 ALA A 99 ? ? -86.38 43.42 64 15 PRO A 112 ? ? -69.79 -169.59 65 15 THR A 141 ? ? -120.32 -50.11 66 15 ARG A 165 ? ? -63.10 -177.15 67 15 GLN A 182 ? ? -102.18 47.14 68 15 ASP A 185 ? ? -127.61 -59.95 69 15 SER A 186 ? ? -45.77 150.01 70 16 VAL A 96 ? ? -87.13 41.34 71 16 THR A 103 ? ? -36.98 152.35 72 16 PRO A 112 ? ? -69.76 -165.13 73 16 THR A 141 ? ? -125.93 -64.99 74 16 ASN A 179 ? ? -63.03 76.39 75 16 SER A 180 ? ? -173.43 -177.07 76 16 LYS A 181 ? ? -100.93 62.81 77 16 SER A 186 ? ? -38.45 147.04 78 17 THR A 103 ? ? -34.89 144.79 79 17 PRO A 178 ? ? -69.77 98.02 80 17 ASN A 179 ? ? -98.02 49.26 81 17 SER A 180 ? ? 36.87 37.73 82 17 PRO A 188 ? ? -69.76 86.77 83 18 THR A 103 ? ? -36.17 152.19 84 18 ASN A 179 ? ? 34.55 33.70 85 18 SER A 183 ? ? -38.94 131.55 86 19 THR A 103 ? ? -39.17 147.60 87 19 GLN A 182 ? ? -72.40 -71.34 88 19 ASP A 185 ? ? -36.10 121.37 89 19 SER A 186 ? ? -59.72 78.24 90 20 ARG A 98 ? ? 37.88 41.26 91 20 THR A 103 ? ? -49.19 168.83 92 20 LYS A 114 ? ? -37.19 -39.93 93 20 PRO A 178 ? ? -69.78 2.38 94 20 LYS A 181 ? ? -58.54 97.74 #