data_2CQK # _entry.id 2CQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQK pdb_00002cqk 10.2210/pdb2cqk/pdb RCSB RCSB024511 ? ? WWPDB D_1000024511 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002013489.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQK _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Suzuki, S.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the La domain of c-Mpl binding protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, S.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _cell.entry_id 2CQK _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CQK _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'C-Mpl binding protein' _entity.formula_weight 11235.766 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'La domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV DEKGEKVRPSHKRCISGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQV DEKGEKVRPSHKRCISGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002013489.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 VAL n 1 10 SER n 1 11 THR n 1 12 GLU n 1 13 ASP n 1 14 LEU n 1 15 LYS n 1 16 GLU n 1 17 CYS n 1 18 LEU n 1 19 LYS n 1 20 LYS n 1 21 GLN n 1 22 LEU n 1 23 GLU n 1 24 PHE n 1 25 CYS n 1 26 PHE n 1 27 SER n 1 28 ARG n 1 29 GLU n 1 30 ASN n 1 31 LEU n 1 32 SER n 1 33 LYS n 1 34 ASP n 1 35 LEU n 1 36 TYR n 1 37 LEU n 1 38 ILE n 1 39 SER n 1 40 GLN n 1 41 MET n 1 42 ASP n 1 43 SER n 1 44 ASP n 1 45 GLN n 1 46 PHE n 1 47 ILE n 1 48 PRO n 1 49 ILE n 1 50 TRP n 1 51 THR n 1 52 VAL n 1 53 ALA n 1 54 ASN n 1 55 MET n 1 56 GLU n 1 57 GLU n 1 58 ILE n 1 59 LYS n 1 60 LYS n 1 61 LEU n 1 62 THR n 1 63 THR n 1 64 ASP n 1 65 PRO n 1 66 ASP n 1 67 LEU n 1 68 ILE n 1 69 LEU n 1 70 GLU n 1 71 VAL n 1 72 LEU n 1 73 ARG n 1 74 SER n 1 75 SER n 1 76 PRO n 1 77 MET n 1 78 VAL n 1 79 GLN n 1 80 VAL n 1 81 ASP n 1 82 GLU n 1 83 LYS n 1 84 GLY n 1 85 GLU n 1 86 LYS n 1 87 VAL n 1 88 ARG n 1 89 PRO n 1 90 SER n 1 91 HIS n 1 92 LYS n 1 93 ARG n 1 94 CYS n 1 95 ILE n 1 96 SER n 1 97 GLY n 1 98 PRO n 1 99 SER n 1 100 SER n 1 101 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RIKEN cDNA IOH13489' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P041004-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LARP4_HUMAN _struct_ref.pdbx_db_accession Q71RC2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV RPSHKRCI ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 95 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q71RC2 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 43 _struct_ref_seq.pdbx_auth_seq_align_end 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQK GLY A 1 ? UNP Q71RC2 ? ? 'cloning artifact' 36 1 1 2CQK SER A 2 ? UNP Q71RC2 ? ? 'cloning artifact' 37 2 1 2CQK SER A 3 ? UNP Q71RC2 ? ? 'cloning artifact' 38 3 1 2CQK GLY A 4 ? UNP Q71RC2 ? ? 'cloning artifact' 39 4 1 2CQK SER A 5 ? UNP Q71RC2 ? ? 'cloning artifact' 40 5 1 2CQK SER A 6 ? UNP Q71RC2 ? ? 'cloning artifact' 41 6 1 2CQK GLY A 7 ? UNP Q71RC2 ? ? 'cloning artifact' 42 7 1 2CQK SER A 96 ? UNP Q71RC2 ? ? 'cloning artifact' 131 8 1 2CQK GLY A 97 ? UNP Q71RC2 ? ? 'cloning artifact' 132 9 1 2CQK PRO A 98 ? UNP Q71RC2 ? ? 'cloning artifact' 133 10 1 2CQK SER A 99 ? UNP Q71RC2 ? ? 'cloning artifact' 134 11 1 2CQK SER A 100 ? UNP Q71RC2 ? ? 'cloning artifact' 135 12 1 2CQK GLY A 101 ? UNP Q71RC2 ? ? 'cloning artifact' 136 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.4mM 13C/15N-PROTEIN; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CQK _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2CQK _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 2CQK _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQK _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9295 'Kobayashi, N.' 4 'data analysis' Olivia 1.10.5 'Yokochi, M.' 5 'structure solution' CYANA 2.0.17 'Guntert, P.' 6 refinement CYANA 2.0.17 'Guntert, P.' 7 # _exptl.entry_id 2CQK _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQK _struct.title 'Solution structure of the La domain of c-Mpl binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQK _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;La domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? PHE A 26 ? THR A 46 PHE A 61 1 ? 16 HELX_P HELX_P2 2 ARG A 28 ? LYS A 33 ? ARG A 63 LYS A 68 1 ? 6 HELX_P HELX_P3 3 LEU A 35 ? GLN A 40 ? LEU A 70 GLN A 75 1 ? 6 HELX_P HELX_P4 4 ILE A 49 ? ASN A 54 ? ILE A 84 ASN A 89 1 ? 6 HELX_P HELX_P5 5 GLU A 56 ? LEU A 61 ? GLU A 91 LEU A 96 1 ? 6 HELX_P HELX_P6 6 PRO A 65 ? SER A 74 ? PRO A 100 SER A 109 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 46 ? PRO A 48 ? PHE A 81 PRO A 83 A 2 LYS A 86 ? ARG A 88 ? LYS A 121 ARG A 123 A 3 VAL A 78 ? VAL A 80 ? VAL A 113 VAL A 115 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 47 ? N ILE A 82 O VAL A 87 ? O VAL A 122 A 2 3 O ARG A 88 ? O ARG A 123 N GLN A 79 ? N GLN A 114 # _database_PDB_matrix.entry_id 2CQK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQK _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 36 36 GLY GLY A . n A 1 2 SER 2 37 37 SER SER A . n A 1 3 SER 3 38 38 SER SER A . n A 1 4 GLY 4 39 39 GLY GLY A . n A 1 5 SER 5 40 40 SER SER A . n A 1 6 SER 6 41 41 SER SER A . n A 1 7 GLY 7 42 42 GLY GLY A . n A 1 8 ALA 8 43 43 ALA ALA A . n A 1 9 VAL 9 44 44 VAL VAL A . n A 1 10 SER 10 45 45 SER SER A . n A 1 11 THR 11 46 46 THR THR A . n A 1 12 GLU 12 47 47 GLU GLU A . n A 1 13 ASP 13 48 48 ASP ASP A . n A 1 14 LEU 14 49 49 LEU LEU A . n A 1 15 LYS 15 50 50 LYS LYS A . n A 1 16 GLU 16 51 51 GLU GLU A . n A 1 17 CYS 17 52 52 CYS CYS A . n A 1 18 LEU 18 53 53 LEU LEU A . n A 1 19 LYS 19 54 54 LYS LYS A . n A 1 20 LYS 20 55 55 LYS LYS A . n A 1 21 GLN 21 56 56 GLN GLN A . n A 1 22 LEU 22 57 57 LEU LEU A . n A 1 23 GLU 23 58 58 GLU GLU A . n A 1 24 PHE 24 59 59 PHE PHE A . n A 1 25 CYS 25 60 60 CYS CYS A . n A 1 26 PHE 26 61 61 PHE PHE A . n A 1 27 SER 27 62 62 SER SER A . n A 1 28 ARG 28 63 63 ARG ARG A . n A 1 29 GLU 29 64 64 GLU GLU A . n A 1 30 ASN 30 65 65 ASN ASN A . n A 1 31 LEU 31 66 66 LEU LEU A . n A 1 32 SER 32 67 67 SER SER A . n A 1 33 LYS 33 68 68 LYS LYS A . n A 1 34 ASP 34 69 69 ASP ASP A . n A 1 35 LEU 35 70 70 LEU LEU A . n A 1 36 TYR 36 71 71 TYR TYR A . n A 1 37 LEU 37 72 72 LEU LEU A . n A 1 38 ILE 38 73 73 ILE ILE A . n A 1 39 SER 39 74 74 SER SER A . n A 1 40 GLN 40 75 75 GLN GLN A . n A 1 41 MET 41 76 76 MET MET A . n A 1 42 ASP 42 77 77 ASP ASP A . n A 1 43 SER 43 78 78 SER SER A . n A 1 44 ASP 44 79 79 ASP ASP A . n A 1 45 GLN 45 80 80 GLN GLN A . n A 1 46 PHE 46 81 81 PHE PHE A . n A 1 47 ILE 47 82 82 ILE ILE A . n A 1 48 PRO 48 83 83 PRO PRO A . n A 1 49 ILE 49 84 84 ILE ILE A . n A 1 50 TRP 50 85 85 TRP TRP A . n A 1 51 THR 51 86 86 THR THR A . n A 1 52 VAL 52 87 87 VAL VAL A . n A 1 53 ALA 53 88 88 ALA ALA A . n A 1 54 ASN 54 89 89 ASN ASN A . n A 1 55 MET 55 90 90 MET MET A . n A 1 56 GLU 56 91 91 GLU GLU A . n A 1 57 GLU 57 92 92 GLU GLU A . n A 1 58 ILE 58 93 93 ILE ILE A . n A 1 59 LYS 59 94 94 LYS LYS A . n A 1 60 LYS 60 95 95 LYS LYS A . n A 1 61 LEU 61 96 96 LEU LEU A . n A 1 62 THR 62 97 97 THR THR A . n A 1 63 THR 63 98 98 THR THR A . n A 1 64 ASP 64 99 99 ASP ASP A . n A 1 65 PRO 65 100 100 PRO PRO A . n A 1 66 ASP 66 101 101 ASP ASP A . n A 1 67 LEU 67 102 102 LEU LEU A . n A 1 68 ILE 68 103 103 ILE ILE A . n A 1 69 LEU 69 104 104 LEU LEU A . n A 1 70 GLU 70 105 105 GLU GLU A . n A 1 71 VAL 71 106 106 VAL VAL A . n A 1 72 LEU 72 107 107 LEU LEU A . n A 1 73 ARG 73 108 108 ARG ARG A . n A 1 74 SER 74 109 109 SER SER A . n A 1 75 SER 75 110 110 SER SER A . n A 1 76 PRO 76 111 111 PRO PRO A . n A 1 77 MET 77 112 112 MET MET A . n A 1 78 VAL 78 113 113 VAL VAL A . n A 1 79 GLN 79 114 114 GLN GLN A . n A 1 80 VAL 80 115 115 VAL VAL A . n A 1 81 ASP 81 116 116 ASP ASP A . n A 1 82 GLU 82 117 117 GLU GLU A . n A 1 83 LYS 83 118 118 LYS LYS A . n A 1 84 GLY 84 119 119 GLY GLY A . n A 1 85 GLU 85 120 120 GLU GLU A . n A 1 86 LYS 86 121 121 LYS LYS A . n A 1 87 VAL 87 122 122 VAL VAL A . n A 1 88 ARG 88 123 123 ARG ARG A . n A 1 89 PRO 89 124 124 PRO PRO A . n A 1 90 SER 90 125 125 SER SER A . n A 1 91 HIS 91 126 126 HIS HIS A . n A 1 92 LYS 92 127 127 LYS LYS A . n A 1 93 ARG 93 128 128 ARG ARG A . n A 1 94 CYS 94 129 129 CYS CYS A . n A 1 95 ILE 95 130 130 ILE ILE A . n A 1 96 SER 96 131 131 SER SER A . n A 1 97 GLY 97 132 132 GLY GLY A . n A 1 98 PRO 98 133 133 PRO PRO A . n A 1 99 SER 99 134 134 SER SER A . n A 1 100 SER 100 135 135 SER SER A . n A 1 101 GLY 101 136 136 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 40 ? ? -132.54 -59.23 2 1 ALA A 43 ? ? -49.72 174.63 3 1 MET A 76 ? ? -47.88 172.28 4 1 ASP A 79 ? ? -92.60 33.26 5 1 MET A 112 ? ? -36.25 -33.10 6 1 GLU A 120 ? ? -130.22 -32.29 7 1 SER A 125 ? ? -45.00 96.70 8 1 HIS A 126 ? ? -85.37 38.54 9 1 SER A 135 ? ? -163.32 111.95 10 2 ALA A 43 ? ? -35.60 136.59 11 2 MET A 76 ? ? -47.50 171.30 12 2 ASP A 79 ? ? -94.72 30.06 13 2 MET A 112 ? ? -39.43 -27.62 14 2 ASP A 116 ? ? -48.73 158.70 15 3 ASP A 69 ? ? -102.18 79.42 16 3 GLN A 80 ? ? 45.04 27.99 17 3 MET A 112 ? ? -39.92 -26.16 18 3 HIS A 126 ? ? -88.97 34.77 19 3 ARG A 128 ? ? -84.89 38.56 20 4 MET A 76 ? ? -47.74 174.11 21 4 ASP A 79 ? ? -91.73 33.79 22 4 MET A 112 ? ? -39.91 -25.69 23 4 ASP A 116 ? ? -39.88 134.21 24 4 SER A 125 ? ? -63.96 95.05 25 5 SER A 41 ? ? -42.20 163.61 26 5 MET A 76 ? ? -48.37 177.60 27 5 ASP A 79 ? ? -88.98 31.37 28 5 ASP A 116 ? ? -38.42 140.18 29 5 PRO A 133 ? ? -69.75 -176.64 30 6 SER A 41 ? ? -52.69 95.56 31 6 MET A 112 ? ? -34.90 -32.21 32 6 ASP A 116 ? ? -39.95 128.20 33 7 HIS A 126 ? ? -91.90 35.30 34 8 ALA A 43 ? ? -39.70 132.55 35 8 MET A 76 ? ? -51.20 -175.93 36 8 MET A 90 ? ? -34.95 136.56 37 8 MET A 112 ? ? -35.64 -32.19 38 8 SER A 125 ? ? -52.51 102.66 39 8 HIS A 126 ? ? -34.44 -39.78 40 8 SER A 134 ? ? -125.81 -51.28 41 9 MET A 76 ? ? -43.56 164.43 42 9 MET A 112 ? ? -34.23 -36.43 43 9 SER A 125 ? ? -45.69 92.91 44 9 ARG A 128 ? ? -106.45 79.87 45 10 ASP A 69 ? ? -101.51 75.53 46 10 MET A 76 ? ? -45.59 170.06 47 10 SER A 125 ? ? -69.84 99.60 48 11 SER A 37 ? ? -49.10 169.65 49 11 SER A 40 ? ? -95.95 40.97 50 11 MET A 76 ? ? -50.93 172.34 51 11 ASP A 79 ? ? -92.96 37.13 52 11 HIS A 126 ? ? -93.12 35.59 53 11 SER A 134 ? ? -49.75 153.85 54 12 VAL A 44 ? ? 32.08 42.09 55 12 MET A 76 ? ? -43.41 166.85 56 12 ASP A 79 ? ? -109.26 51.83 57 12 GLN A 80 ? ? 33.07 36.12 58 12 MET A 112 ? ? -34.21 -33.08 59 12 ASP A 116 ? ? -39.28 159.70 60 12 HIS A 126 ? ? -96.73 32.57 61 13 MET A 76 ? ? -47.33 173.32 62 13 THR A 97 ? ? -162.09 113.36 63 13 GLU A 120 ? ? -130.11 -32.46 64 13 HIS A 126 ? ? -91.25 31.18 65 14 MET A 76 ? ? -48.02 173.57 66 14 SER A 125 ? ? -60.10 99.11 67 14 HIS A 126 ? ? -91.16 39.26 68 15 SER A 45 ? ? -174.18 112.06 69 15 MET A 76 ? ? -44.70 165.95 70 15 LYS A 127 ? ? -92.88 42.97 71 16 SER A 125 ? ? -39.98 125.40 72 16 ARG A 128 ? ? -37.94 115.60 73 16 SER A 135 ? ? -60.65 -178.81 74 17 SER A 45 ? ? -129.03 -63.07 75 17 HIS A 126 ? ? -83.91 41.70 76 17 PRO A 133 ? ? -69.70 93.29 77 18 MET A 76 ? ? -46.21 168.28 78 18 MET A 112 ? ? -39.93 -25.75 79 18 SER A 125 ? ? -57.28 100.60 80 18 SER A 135 ? ? 36.31 45.76 81 19 ASP A 69 ? ? -104.21 74.92 82 19 MET A 76 ? ? -43.60 151.76 83 19 HIS A 126 ? ? -89.14 32.42 84 19 ARG A 128 ? ? -48.92 108.71 85 20 ASP A 116 ? ? -37.52 145.35 86 20 HIS A 126 ? ? -89.42 42.39 #