data_2CQW # _entry.id 2CQW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQW pdb_00002cqw 10.2210/pdb2cqw/pdb RCSB RCSB024523 ? ? WWPDB D_1000024523 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007006808.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQW _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hamada, T.' 1 'Hirota, H.' 2 'Hayashi, F.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of RSGI RUH-041, a SMB-like domain from mouse cDNA' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hamada, T.' 1 ? primary 'Hirota, H.' 2 ? primary 'Hayashi, F.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Sushi domain containing 2' _entity.formula_weight 8355.288 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SMB-like domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RSGI RUH-041, a somatomedin_B-like domain' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGIPGPGFTAGAQGSCSLRCGAQDGLCSCHPTCSGLGTCCEDFLDYCLEILPSSGSMMGGKDFVVQHLKWTDPSG PSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGIPGPGFTAGAQGSCSLRCGAQDGLCSCHPTCSGLGTCCEDFLDYCLEILPSSGSMMGGKDFVVQHLKWTDPSG PSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007006808.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ILE n 1 9 PRO n 1 10 GLY n 1 11 PRO n 1 12 GLY n 1 13 PHE n 1 14 THR n 1 15 ALA n 1 16 GLY n 1 17 ALA n 1 18 GLN n 1 19 GLY n 1 20 SER n 1 21 CYS n 1 22 SER n 1 23 LEU n 1 24 ARG n 1 25 CYS n 1 26 GLY n 1 27 ALA n 1 28 GLN n 1 29 ASP n 1 30 GLY n 1 31 LEU n 1 32 CYS n 1 33 SER n 1 34 CYS n 1 35 HIS n 1 36 PRO n 1 37 THR n 1 38 CYS n 1 39 SER n 1 40 GLY n 1 41 LEU n 1 42 GLY n 1 43 THR n 1 44 CYS n 1 45 CYS n 1 46 GLU n 1 47 ASP n 1 48 PHE n 1 49 LEU n 1 50 ASP n 1 51 TYR n 1 52 CYS n 1 53 LEU n 1 54 GLU n 1 55 ILE n 1 56 LEU n 1 57 PRO n 1 58 SER n 1 59 SER n 1 60 GLY n 1 61 SER n 1 62 MET n 1 63 MET n 1 64 GLY n 1 65 GLY n 1 66 LYS n 1 67 ASP n 1 68 PHE n 1 69 VAL n 1 70 VAL n 1 71 GLN n 1 72 HIS n 1 73 LEU n 1 74 LYS n 1 75 TRP n 1 76 THR n 1 77 ASP n 1 78 PRO n 1 79 SER n 1 80 GLY n 1 81 PRO n 1 82 SER n 1 83 SER n 1 84 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Susd2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040315-19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9DBX3_MOUSE _struct_ref.pdbx_db_accession Q9DBX3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code IPGPGFTAGAQGSCSLRCGAQDGLCSCHPTCSGLGTCCEDFLDYCLEILPSSGSMMGGKDFVVQHLKWTDP _struct_ref.pdbx_align_begin 16 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 78 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9DBX3 _struct_ref_seq.db_align_beg 16 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 86 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 78 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQW GLY A 1 ? UNP Q9DBX3 ? ? 'cloning artifact' 1 1 1 2CQW SER A 2 ? UNP Q9DBX3 ? ? 'cloning artifact' 2 2 1 2CQW SER A 3 ? UNP Q9DBX3 ? ? 'cloning artifact' 3 3 1 2CQW GLY A 4 ? UNP Q9DBX3 ? ? 'cloning artifact' 4 4 1 2CQW SER A 5 ? UNP Q9DBX3 ? ? 'cloning artifact' 5 5 1 2CQW SER A 6 ? UNP Q9DBX3 ? ? 'cloning artifact' 6 6 1 2CQW GLY A 7 ? UNP Q9DBX3 ? ? 'cloning artifact' 7 7 1 2CQW SER A 79 ? UNP Q9DBX3 ? ? 'cloning artifact' 79 8 1 2CQW GLY A 80 ? UNP Q9DBX3 ? ? 'cloning artifact' 80 9 1 2CQW PRO A 81 ? UNP Q9DBX3 ? ? 'cloning artifact' 81 10 1 2CQW SER A 82 ? UNP Q9DBX3 ? ? 'cloning artifact' 82 11 1 2CQW SER A 83 ? UNP Q9DBX3 ? ? 'cloning artifact' 83 12 1 2CQW GLY A 84 ? UNP Q9DBX3 ? ? 'cloning artifact' 84 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '100mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.06mM SMB-like domain U-15N,13C; 20mM d-Tris-HCl buffer (pH 7.0); 100mM NaCl; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 INOVA Varian 600 ? 2 INOVA Varian 800 ? # _pdbx_nmr_refine.entry_id 2CQW _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2CQW _pdbx_nmr_details.text 'This structure was determined using 3D NMR techniques' # _pdbx_nmr_ensemble.entry_id 2CQW _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQW _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1c Varian 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B. A.' 3 'data analysis' KUJIRA 0.9295 'Kobayashi, N.' 4 'structure solution' CYANA 1.0.8 'Guntert, P.' 5 refinement CYANA 1.0.8 'Guntert, P.' 6 # _exptl.entry_id 2CQW _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQW _struct.title 'Solution structure of RSGI RUH-041, a SMB-like domain from mouse cDNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQW _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;somatomedin_B-like domain, protein binding, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 37 ? GLY A 42 ? THR A 37 GLY A 42 1 ? 6 HELX_P HELX_P2 2 ASP A 47 ? CYS A 52 ? ASP A 47 CYS A 52 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 34 SG ? ? A CYS 21 A CYS 34 1_555 ? ? ? ? ? ? ? 2.097 ? ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 52 SG ? ? A CYS 25 A CYS 52 1_555 ? ? ? ? ? ? ? 2.012 ? ? disulf3 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 32 A CYS 45 1_555 ? ? ? ? ? ? ? 2.099 ? ? disulf4 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 38 A CYS 44 1_555 ? ? ? ? ? ? ? 2.094 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2CQW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQW _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 MET 63 63 63 MET MET A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 GLY 84 84 84 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 20 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 38 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 H _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 42 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.54 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 3 ? ? -134.83 -58.61 2 1 SER A 5 ? ? -135.27 -59.59 3 1 SER A 6 ? ? 66.83 145.98 4 1 THR A 14 ? ? 60.29 93.57 5 1 ALA A 15 ? ? -91.76 -63.61 6 1 ARG A 24 ? ? -114.71 -93.37 7 1 GLU A 54 ? ? -162.05 42.74 8 1 MET A 62 ? ? 59.23 117.56 9 1 MET A 63 ? ? -141.41 -54.23 10 1 VAL A 70 ? ? -170.26 145.94 11 1 GLN A 71 ? ? -174.14 122.32 12 1 LYS A 74 ? ? -170.16 143.35 13 1 TRP A 75 ? ? -175.02 116.32 14 1 ASP A 77 ? ? 176.81 99.83 15 2 SER A 2 ? ? 179.17 170.58 16 2 ILE A 8 ? ? 63.81 89.85 17 2 PRO A 11 ? ? -74.99 -167.42 18 2 PHE A 13 ? ? -174.22 148.92 19 2 THR A 14 ? ? -143.06 -62.88 20 2 ALA A 17 ? ? 61.11 74.10 21 2 ARG A 24 ? ? -108.90 -92.19 22 2 GLU A 54 ? ? -175.15 37.04 23 2 SER A 61 ? ? 56.30 85.17 24 2 MET A 63 ? ? 67.00 -71.40 25 2 SER A 82 ? ? 179.49 166.86 26 3 SER A 2 ? ? -160.37 -58.76 27 3 SER A 3 ? ? 58.57 169.18 28 3 SER A 6 ? ? 62.93 155.96 29 3 ILE A 8 ? ? -162.19 87.26 30 3 PHE A 13 ? ? -172.00 133.26 31 3 GLN A 18 ? ? -88.49 -71.79 32 3 ARG A 24 ? ? -44.53 -94.12 33 3 GLU A 54 ? ? -157.91 40.67 34 3 MET A 63 ? ? 46.52 93.13 35 3 VAL A 69 ? ? -98.57 -67.08 36 3 VAL A 70 ? ? 44.26 -163.98 37 3 GLN A 71 ? ? 177.39 166.33 38 4 SER A 2 ? ? 43.65 89.09 39 4 SER A 5 ? ? -173.66 118.97 40 4 ARG A 24 ? ? -120.45 -93.68 41 4 GLU A 54 ? ? -176.20 37.90 42 4 LEU A 56 ? ? -49.65 154.78 43 4 MET A 63 ? ? -152.57 -56.46 44 4 VAL A 69 ? ? 63.33 144.53 45 4 GLN A 71 ? ? -59.24 170.89 46 4 THR A 76 ? ? 59.17 114.32 47 4 SER A 82 ? ? 59.41 157.13 48 4 SER A 83 ? ? -155.87 -58.61 49 5 SER A 5 ? ? 62.93 171.18 50 5 PHE A 13 ? ? -128.39 -56.02 51 5 THR A 14 ? ? 54.64 94.32 52 5 ALA A 17 ? ? -172.44 87.60 53 5 ARG A 24 ? ? -121.79 -93.43 54 5 GLU A 54 ? ? -174.65 38.43 55 5 LEU A 56 ? ? -49.82 156.06 56 5 SER A 58 ? ? 179.05 171.61 57 5 LYS A 66 ? ? -172.91 144.70 58 5 HIS A 72 ? ? 58.64 166.94 59 5 LEU A 73 ? ? -166.33 -65.21 60 5 LYS A 74 ? ? -106.16 -61.73 61 5 ASP A 77 ? ? 62.47 145.30 62 5 SER A 82 ? ? 54.03 170.76 63 6 ILE A 8 ? ? 64.26 83.81 64 6 ALA A 15 ? ? 46.55 73.27 65 6 SER A 22 ? ? -48.26 -73.30 66 6 ARG A 24 ? ? -46.87 -93.19 67 6 GLU A 54 ? ? -177.74 40.88 68 6 SER A 59 ? ? -128.74 -59.66 69 6 MET A 62 ? ? 50.59 88.34 70 6 LYS A 66 ? ? 60.91 174.47 71 6 HIS A 72 ? ? 178.25 147.39 72 6 LYS A 74 ? ? -171.48 149.98 73 6 TRP A 75 ? ? -179.64 139.23 74 7 SER A 5 ? ? -66.82 90.61 75 7 ARG A 24 ? ? -119.31 -92.58 76 7 CYS A 32 ? ? -166.76 -168.82 77 7 GLU A 54 ? ? -177.88 38.96 78 7 LEU A 56 ? ? -47.77 156.25 79 7 SER A 58 ? ? -123.31 -57.82 80 7 SER A 59 ? ? 68.65 -65.96 81 7 SER A 61 ? ? 43.79 91.61 82 7 MET A 63 ? ? 54.74 96.81 83 7 LYS A 66 ? ? -170.44 148.03 84 7 ASP A 67 ? ? -97.20 -64.06 85 7 PHE A 68 ? ? 71.57 -60.57 86 7 GLN A 71 ? ? -150.14 -59.38 87 7 LYS A 74 ? ? 65.61 137.52 88 7 THR A 76 ? ? 60.58 156.44 89 7 SER A 79 ? ? -158.53 -62.86 90 8 SER A 5 ? ? 53.58 103.24 91 8 THR A 14 ? ? 60.97 143.14 92 8 ARG A 24 ? ? -124.45 -93.80 93 8 LEU A 53 ? ? -98.27 30.68 94 8 GLU A 54 ? ? -177.76 40.02 95 8 SER A 58 ? ? -168.81 83.35 96 9 SER A 3 ? ? -174.64 124.12 97 9 SER A 6 ? ? 178.10 152.87 98 9 THR A 14 ? ? -156.88 -59.76 99 9 ALA A 15 ? ? -159.95 -60.51 100 9 GLN A 18 ? ? -171.52 -61.98 101 9 ARG A 24 ? ? -60.82 -92.08 102 9 GLU A 54 ? ? -176.76 37.18 103 9 LEU A 56 ? ? -46.97 155.03 104 9 SER A 58 ? ? -178.11 -55.49 105 9 SER A 59 ? ? 39.54 76.95 106 9 MET A 62 ? ? 62.18 108.03 107 9 SER A 83 ? ? -67.92 83.82 108 10 SER A 3 ? ? 66.21 148.84 109 10 SER A 5 ? ? 64.00 129.56 110 10 GLN A 18 ? ? 68.90 172.42 111 10 ARG A 24 ? ? -44.17 -94.32 112 10 GLU A 54 ? ? -163.34 45.79 113 10 LEU A 56 ? ? -38.84 99.34 114 10 SER A 58 ? ? -124.61 -63.48 115 10 LEU A 73 ? ? -173.74 149.71 116 10 ASP A 77 ? ? -173.20 99.88 117 10 SER A 82 ? ? -133.48 -53.66 118 10 SER A 83 ? ? 60.26 159.22 119 11 SER A 2 ? ? 62.33 146.05 120 11 SER A 3 ? ? -154.14 -59.36 121 11 SER A 5 ? ? 55.67 98.73 122 11 SER A 6 ? ? -173.05 121.74 123 11 ALA A 15 ? ? 60.17 160.93 124 11 ALA A 17 ? ? -150.48 -65.82 125 11 LEU A 23 ? ? -167.94 32.13 126 11 ARG A 24 ? ? -90.71 -70.71 127 11 GLU A 54 ? ? -172.41 37.97 128 11 LEU A 56 ? ? -49.15 155.44 129 11 SER A 59 ? ? -107.32 -61.45 130 11 LYS A 74 ? ? -172.69 138.30 131 11 TRP A 75 ? ? 178.66 131.57 132 11 ASP A 77 ? ? 177.00 95.54 133 11 SER A 83 ? ? 177.93 169.74 134 12 SER A 6 ? ? 179.02 150.61 135 12 THR A 14 ? ? -168.44 -44.10 136 12 ALA A 15 ? ? 67.03 164.72 137 12 ARG A 24 ? ? -132.02 -93.89 138 12 GLU A 54 ? ? -176.68 40.83 139 12 LEU A 56 ? ? -47.95 155.51 140 12 SER A 59 ? ? -175.62 -59.54 141 12 LYS A 74 ? ? 65.86 178.56 142 12 TRP A 75 ? ? 63.82 122.63 143 12 SER A 83 ? ? 68.65 164.69 144 13 SER A 2 ? ? -162.02 -58.43 145 13 SER A 3 ? ? -55.34 99.68 146 13 SER A 5 ? ? -137.38 -60.20 147 13 SER A 6 ? ? 62.35 136.33 148 13 GLN A 18 ? ? -59.57 -175.90 149 13 ARG A 24 ? ? -124.06 -93.25 150 13 GLU A 54 ? ? -177.08 42.38 151 13 LEU A 56 ? ? -39.89 100.14 152 13 SER A 58 ? ? -44.09 154.09 153 13 MET A 62 ? ? 68.19 -72.67 154 13 MET A 63 ? ? 54.10 92.77 155 14 GLN A 18 ? ? 59.73 165.52 156 14 LEU A 23 ? ? -109.87 41.92 157 14 ARG A 24 ? ? -131.81 -93.20 158 14 GLU A 54 ? ? -172.52 55.39 159 14 ILE A 55 ? ? -130.21 -45.41 160 14 LEU A 56 ? ? -40.43 158.42 161 14 MET A 62 ? ? -179.66 118.58 162 14 MET A 63 ? ? -46.17 153.85 163 14 LYS A 66 ? ? -165.86 75.16 164 14 PHE A 68 ? ? -176.68 121.58 165 14 SER A 82 ? ? -41.92 107.57 166 15 SER A 2 ? ? 65.19 153.12 167 15 SER A 3 ? ? 177.60 165.57 168 15 SER A 6 ? ? -134.26 -53.74 169 15 ILE A 8 ? ? 164.20 -52.61 170 15 ALA A 17 ? ? 49.36 82.19 171 15 GLN A 18 ? ? -175.76 -178.68 172 15 ARG A 24 ? ? -102.78 -92.80 173 15 GLU A 54 ? ? -159.55 46.10 174 15 SER A 58 ? ? -178.03 85.75 175 15 SER A 59 ? ? 56.20 170.82 176 15 MET A 62 ? ? -177.71 108.51 177 15 ASP A 67 ? ? 63.09 132.60 178 15 LEU A 73 ? ? 54.72 89.73 179 15 LYS A 74 ? ? -175.51 79.00 180 15 THR A 76 ? ? -172.28 136.79 181 15 ASP A 77 ? ? 177.84 99.55 182 15 SER A 83 ? ? 66.16 157.74 183 16 SER A 2 ? ? -146.01 -58.56 184 16 ARG A 24 ? ? -117.43 -94.29 185 16 GLU A 54 ? ? -158.17 48.40 186 16 SER A 61 ? ? 57.44 98.98 187 16 ASP A 67 ? ? -47.46 161.12 188 16 SER A 83 ? ? 69.07 167.40 189 17 ALA A 17 ? ? -143.38 -60.59 190 17 GLN A 18 ? ? -57.35 -175.88 191 17 LEU A 23 ? ? -168.99 32.52 192 17 ARG A 24 ? ? -105.38 -92.53 193 17 GLU A 54 ? ? -146.37 42.99 194 17 SER A 58 ? ? -171.72 83.55 195 17 SER A 61 ? ? 64.86 114.22 196 17 PHE A 68 ? ? -174.51 147.09 197 17 HIS A 72 ? ? -171.76 -61.84 198 17 LEU A 73 ? ? -45.74 153.74 199 17 SER A 83 ? ? 65.23 157.56 200 18 SER A 5 ? ? -175.45 143.78 201 18 SER A 6 ? ? -45.62 165.92 202 18 ARG A 24 ? ? -121.04 -93.53 203 18 GLU A 54 ? ? -167.59 42.67 204 18 SER A 59 ? ? 73.01 -59.77 205 18 MET A 63 ? ? -67.47 96.25 206 18 SER A 82 ? ? 63.49 134.70 207 19 THR A 14 ? ? 63.41 119.66 208 19 ARG A 24 ? ? -109.55 -95.58 209 19 CYS A 32 ? ? -147.24 -159.38 210 19 LEU A 53 ? ? -99.73 30.08 211 19 GLU A 54 ? ? -174.48 39.77 212 19 LEU A 56 ? ? -42.57 102.01 213 19 VAL A 69 ? ? -171.89 116.98 214 19 HIS A 72 ? ? 177.98 132.47 215 19 LEU A 73 ? ? -165.56 85.19 216 19 TRP A 75 ? ? -177.01 115.24 217 19 THR A 76 ? ? -170.01 137.81 218 19 ASP A 77 ? ? 176.43 99.86 219 20 THR A 14 ? ? -39.46 154.39 220 20 ALA A 15 ? ? -169.33 67.24 221 20 CYS A 21 ? ? -118.53 54.05 222 20 ARG A 24 ? ? -50.03 -94.20 223 20 LEU A 53 ? ? -98.97 30.51 224 20 GLU A 54 ? ? -168.94 31.61 225 20 LEU A 56 ? ? -48.75 154.88 226 20 MET A 62 ? ? 57.92 87.86 #