HEADER SIGNALING PROTEIN 20-MAY-05 2CR4 TITLE SOLUTION STRUCTURE OF THE SH2 DOMAIN OF HUMAN SH3BP2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SH3 DOMAIN-BINDING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH2 DOMAIN; COMPND 5 SYNONYM: 3BP-2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SH3BP2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040607-02; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS SH2 DOMAIN, 3BP-2, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.HATTA,T.TOMIZAWA,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CR4 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CR4 1 VERSN REVDAT 1 20-NOV-05 2CR4 0 JRNL AUTH R.HATTA,T.TOMIZAWA,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SH2 DOMAIN OF HUMAN SH3BP2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CR4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024531. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.23MM 13C, 15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH7.0); 100MM REMARK 210 NACL; 1MM DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVEIW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LOWEST ENERGY,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 54 158.75 -49.08 REMARK 500 1 ASP A 79 28.62 49.71 REMARK 500 1 GLU A 87 -30.90 -39.06 REMARK 500 1 HIS A 101 -31.79 -36.60 REMARK 500 1 VAL A 104 146.63 -36.45 REMARK 500 1 ARG A 114 -61.73 -97.13 REMARK 500 2 TYR A 10 75.05 -118.67 REMARK 500 2 LYS A 12 40.68 -81.59 REMARK 500 2 LEU A 46 109.21 -52.97 REMARK 500 2 SER A 56 154.93 -37.29 REMARK 500 2 VAL A 91 -35.86 -34.39 REMARK 500 2 GLN A 109 -76.57 -80.30 REMARK 500 2 ARG A 114 -60.47 -96.11 REMARK 500 2 THR A 120 -74.57 -47.78 REMARK 500 2 SER A 121 119.73 -166.89 REMARK 500 3 ASN A 17 33.25 -84.11 REMARK 500 3 THR A 36 -19.96 -48.29 REMARK 500 3 SER A 53 39.21 -83.66 REMARK 500 3 GLU A 87 -37.56 -36.75 REMARK 500 3 HIS A 101 -32.63 -35.99 REMARK 500 3 VAL A 104 146.13 -34.94 REMARK 500 3 TYR A 119 171.67 -47.21 REMARK 500 4 SER A 5 108.98 -35.84 REMARK 500 4 TYR A 10 69.64 -108.48 REMARK 500 4 LYS A 12 32.75 -86.74 REMARK 500 4 ASN A 17 32.28 -85.17 REMARK 500 4 LEU A 46 104.67 -56.34 REMARK 500 4 SER A 53 74.37 -64.38 REMARK 500 4 LYS A 58 154.66 -48.74 REMARK 500 4 VAL A 91 -26.18 -38.67 REMARK 500 4 VAL A 104 144.01 -39.05 REMARK 500 5 ASP A 9 45.62 -103.60 REMARK 500 5 SER A 52 -64.78 -106.27 REMARK 500 5 GLU A 87 -30.88 -37.95 REMARK 500 5 VAL A 104 147.84 -38.28 REMARK 500 5 ARG A 114 -61.23 -94.53 REMARK 500 5 SER A 125 171.38 -53.73 REMARK 500 6 LEU A 46 104.88 -47.05 REMARK 500 6 SER A 52 67.49 -103.35 REMARK 500 6 GLU A 87 -32.09 -35.10 REMARK 500 6 VAL A 91 -38.92 -39.10 REMARK 500 6 ARG A 114 -60.27 -102.94 REMARK 500 7 SER A 5 -62.04 -98.21 REMARK 500 7 GLU A 8 140.09 -39.03 REMARK 500 7 LEU A 46 103.30 -48.50 REMARK 500 7 ASP A 79 26.51 49.06 REMARK 500 7 GLU A 87 -38.15 -34.31 REMARK 500 7 VAL A 91 -33.44 -35.34 REMARK 500 7 VAL A 104 155.66 -42.52 REMARK 500 7 ARG A 114 -63.29 -96.26 REMARK 500 REMARK 500 THIS ENTRY HAS 172 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001002513.1 RELATED DB: TARGETDB DBREF 2CR4 A 8 120 UNP P78314 3BP2_HUMAN 446 558 SEQADV 2CR4 GLY A 1 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 2 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 3 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 GLY A 4 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 5 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 6 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 GLY A 7 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 121 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 GLY A 122 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 PRO A 123 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 124 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 SER A 125 UNP P78314 CLONING ARTIFACT SEQADV 2CR4 GLY A 126 UNP P78314 CLONING ARTIFACT SEQRES 1 A 126 GLY SER SER GLY SER SER GLY GLU ASP TYR GLU LYS VAL SEQRES 2 A 126 PRO LEU PRO ASN SER VAL PHE VAL ASN THR THR GLU SER SEQRES 3 A 126 CYS GLU VAL GLU ARG LEU PHE LYS ALA THR SER PRO ARG SEQRES 4 A 126 GLY GLU PRO GLN ASP GLY LEU TYR CYS ILE ARG ASN SER SEQRES 5 A 126 SER THR LYS SER GLY LYS VAL LEU VAL VAL TRP ASP GLU SEQRES 6 A 126 THR SER ASN LYS VAL ARG ASN TYR ARG ILE PHE GLU LYS SEQRES 7 A 126 ASP SER LYS PHE TYR LEU GLU GLY GLU VAL LEU PHE VAL SEQRES 8 A 126 SER VAL GLY SER MET VAL GLU HIS TYR HIS THR HIS VAL SEQRES 9 A 126 LEU PRO SER HIS GLN SER LEU LEU LEU ARG HIS PRO TYR SEQRES 10 A 126 GLY TYR THR SER GLY PRO SER SER GLY HELIX 1 1 GLU A 25 SER A 37 1 13 HELIX 2 2 SER A 92 HIS A 101 1 10 SHEET 1 A 3 TYR A 47 ASN A 51 0 SHEET 2 A 3 LYS A 58 VAL A 62 -1 O VAL A 59 N ARG A 50 SHEET 3 A 3 TYR A 73 ARG A 74 -1 O TYR A 73 N LEU A 60 SHEET 1 B 3 PHE A 76 LYS A 78 0 SHEET 2 B 3 LYS A 81 TYR A 83 -1 O LYS A 81 N LYS A 78 SHEET 3 B 3 LEU A 89 PHE A 90 -1 O PHE A 90 N PHE A 82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1