HEADER CHAPERONE 20-MAY-05 2CRL TITLE THE APO FORM OF HMA DOMAIN OF COPPER CHAPERONE FOR SUPEROXIDE TITLE 2 DISMUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HMA DOMAIN; COMPND 5 SYNONYM: SUPEROXIDE DISMUTASE COPPER CHAPERONE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CCS; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050111-23; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS SOD1, FAMILIAL ALS, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CRL 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CRL 1 VERSN REVDAT 1 20-NOV-05 2CRL 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL THE APO FORM OF HMA DOMAIN OF COPPER CHAPERONE FOR JRNL TITL 2 SUPEROXIDE DISMUTASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CRL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024546. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.40MM HMA DOMAIN U-13C,15N; REMARK 210 20MM TRISHCL, 100MM NACL, 1MM REMARK 210 DTT, 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.901, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 28 -59.35 -129.56 REMARK 500 1 ALA A 44 124.83 -34.31 REMARK 500 1 GLN A 56 36.63 38.98 REMARK 500 2 SER A 2 139.53 -170.31 REMARK 500 2 SER A 5 89.35 -66.31 REMARK 500 2 THR A 17 99.48 -45.00 REMARK 500 2 ALA A 44 117.02 -34.88 REMARK 500 2 GLN A 56 39.40 37.72 REMARK 500 3 SER A 2 41.90 39.12 REMARK 500 3 MET A 8 146.54 -174.89 REMARK 500 3 GLN A 15 40.00 -82.75 REMARK 500 3 THR A 28 -39.66 -132.23 REMARK 500 3 ALA A 44 109.17 -34.75 REMARK 500 3 SER A 66 -32.09 -39.96 REMARK 500 3 MET A 85 104.08 -34.34 REMARK 500 3 PRO A 95 -179.82 -69.74 REMARK 500 4 ALA A 9 107.48 -35.72 REMARK 500 4 ALA A 44 135.37 -38.66 REMARK 500 4 GLN A 56 38.10 35.77 REMARK 500 4 SER A 66 -30.87 -35.94 REMARK 500 4 PRO A 95 2.29 -69.82 REMARK 500 4 SER A 97 94.51 -57.10 REMARK 500 5 ASN A 14 40.64 -90.60 REMARK 500 5 ALA A 44 117.38 -33.93 REMARK 500 5 GLN A 56 35.80 34.80 REMARK 500 5 LEU A 90 148.66 -34.67 REMARK 500 5 SER A 97 -56.87 -123.59 REMARK 500 6 MET A 8 103.64 -51.05 REMARK 500 6 THR A 28 -62.53 -122.85 REMARK 500 6 VAL A 36 -38.42 -39.70 REMARK 500 6 ALA A 44 145.47 -37.47 REMARK 500 6 GLN A 56 43.95 34.38 REMARK 500 6 GLN A 91 125.90 -171.21 REMARK 500 7 ASN A 14 -54.22 -120.56 REMARK 500 7 GLN A 15 37.51 39.77 REMARK 500 7 ALA A 44 141.09 -37.67 REMARK 500 7 GLN A 56 38.85 39.70 REMARK 500 7 MET A 85 31.13 35.66 REMARK 500 8 GLN A 15 43.59 -108.97 REMARK 500 8 THR A 28 -57.33 -124.60 REMARK 500 8 SER A 97 42.89 37.10 REMARK 500 9 SER A 3 -51.15 -132.64 REMARK 500 9 SER A 6 117.29 -164.73 REMARK 500 9 MET A 8 113.07 -161.71 REMARK 500 9 ASN A 14 42.15 -103.28 REMARK 500 9 SER A 31 -70.03 -34.43 REMARK 500 9 ALA A 44 108.58 -42.33 REMARK 500 9 GLN A 56 44.94 37.12 REMARK 500 9 PRO A 95 -178.36 -69.76 REMARK 500 10 SER A 31 -70.29 -32.71 REMARK 500 REMARK 500 THIS ENTRY HAS 99 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002000359.1 RELATED DB: TARGETDB DBREF 2CRL A 8 92 UNP O14618 CCS_HUMAN 1 85 SEQADV 2CRL GLY A 1 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 2 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 3 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 4 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 5 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 6 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 7 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 93 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 94 UNP O14618 CLONING ARTIFACT SEQADV 2CRL PRO A 95 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 96 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 97 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 98 UNP O14618 CLONING ARTIFACT SEQRES 1 A 98 GLY SER SER GLY SER SER GLY MET ALA SER ASP SER GLY SEQRES 2 A 98 ASN GLN GLY THR LEU CYS THR LEU GLU PHE ALA VAL GLN SEQRES 3 A 98 MET THR CYS GLN SER CYS VAL ASP ALA VAL ARG LYS SER SEQRES 4 A 98 LEU GLN GLY VAL ALA GLY VAL GLN ASP VAL GLU VAL HIS SEQRES 5 A 98 LEU GLU ASP GLN MET VAL LEU VAL HIS THR THR LEU PRO SEQRES 6 A 98 SER GLN GLU VAL GLN ALA LEU LEU GLU GLY THR GLY ARG SEQRES 7 A 98 GLN ALA VAL LEU LYS GLY MET GLY SER GLY GLN LEU GLN SEQRES 8 A 98 ASN SER GLY PRO SER SER GLY HELIX 1 1 CYS A 29 SER A 39 1 11 HELIX 2 2 PRO A 65 GLY A 75 1 11 SHEET 1 A 4 ASP A 48 HIS A 52 0 SHEET 2 A 4 MET A 57 THR A 62 -1 O HIS A 61 N ASP A 48 SHEET 3 A 4 CYS A 19 VAL A 25 -1 N PHE A 23 O VAL A 58 SHEET 4 A 4 ALA A 80 GLY A 84 -1 O VAL A 81 N ALA A 24 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1