data_2CRQ # _entry.id 2CRQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CRQ pdb_00002crq 10.2210/pdb2crq/pdb RCSB RCSB024550 ? ? WWPDB D_1000024550 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007014722.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CRQ _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagashima, T.' 1 'Hayashi, F.' 2 'Yokoyama, S.' 3 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 4 # _citation.id primary _citation.title 'Solution structure of C-terminal domain of RIKEN cDNA 2810012L14' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagashima, T.' 1 ? primary 'Hayashi, F.' 2 ? primary 'Yokoyama, S.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'mitochondrial translational initiation factor 3' _entity.formula_weight 12461.984 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment Peptidase_M10_N _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATF SSRPKAIRGGTASMCVFRHLSKKEEKSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATF SSRPKAIRGGTASMCVFRHLSKKEEKSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007014722.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 LYS n 1 10 THR n 1 11 GLY n 1 12 PRO n 1 13 THR n 1 14 MET n 1 15 THR n 1 16 LYS n 1 17 GLU n 1 18 LEU n 1 19 VAL n 1 20 PHE n 1 21 SER n 1 22 SER n 1 23 ASN n 1 24 ILE n 1 25 GLY n 1 26 GLN n 1 27 HIS n 1 28 ASP n 1 29 LEU n 1 30 ASP n 1 31 THR n 1 32 LYS n 1 33 SER n 1 34 LYS n 1 35 GLN n 1 36 ILE n 1 37 GLN n 1 38 GLN n 1 39 TRP n 1 40 ILE n 1 41 GLU n 1 42 LYS n 1 43 LYS n 1 44 TYR n 1 45 HIS n 1 46 VAL n 1 47 GLN n 1 48 VAL n 1 49 THR n 1 50 ILE n 1 51 LYS n 1 52 ARG n 1 53 ARG n 1 54 LYS n 1 55 ASP n 1 56 ALA n 1 57 GLU n 1 58 GLN n 1 59 SER n 1 60 GLU n 1 61 GLU n 1 62 GLU n 1 63 THR n 1 64 GLU n 1 65 GLU n 1 66 ILE n 1 67 PHE n 1 68 ASN n 1 69 GLN n 1 70 ILE n 1 71 LEU n 1 72 GLN n 1 73 THR n 1 74 MET n 1 75 PRO n 1 76 ASP n 1 77 ILE n 1 78 ALA n 1 79 THR n 1 80 PHE n 1 81 SER n 1 82 SER n 1 83 ARG n 1 84 PRO n 1 85 LYS n 1 86 ALA n 1 87 ILE n 1 88 ARG n 1 89 GLY n 1 90 GLY n 1 91 THR n 1 92 ALA n 1 93 SER n 1 94 MET n 1 95 CYS n 1 96 VAL n 1 97 PHE n 1 98 ARG n 1 99 HIS n 1 100 LEU n 1 101 SER n 1 102 LYS n 1 103 LYS n 1 104 GLU n 1 105 GLU n 1 106 LYS n 1 107 SER n 1 108 GLY n 1 109 PRO n 1 110 SER n 1 111 SER n 1 112 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene 'RIKEN cDNA 2810012L14' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P041012-09 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9CZD5_MOUSE _struct_ref.pdbx_db_accession Q9CZD5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPKAI RGGTASMCVFRHLSKKEEK ; _struct_ref.pdbx_align_begin 148 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CRQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9CZD5 _struct_ref_seq.db_align_beg 148 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 246 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CRQ GLY A 1 ? UNP Q9CZD5 ? ? 'cloning artifact' 1 1 1 2CRQ SER A 2 ? UNP Q9CZD5 ? ? 'cloning artifact' 2 2 1 2CRQ SER A 3 ? UNP Q9CZD5 ? ? 'cloning artifact' 3 3 1 2CRQ GLY A 4 ? UNP Q9CZD5 ? ? 'cloning artifact' 4 4 1 2CRQ SER A 5 ? UNP Q9CZD5 ? ? 'cloning artifact' 5 5 1 2CRQ SER A 6 ? UNP Q9CZD5 ? ? 'cloning artifact' 6 6 1 2CRQ GLY A 7 ? UNP Q9CZD5 ? ? 'cloning artifact' 7 7 1 2CRQ SER A 107 ? UNP Q9CZD5 ? ? 'cloning artifact' 107 8 1 2CRQ GLY A 108 ? UNP Q9CZD5 ? ? 'cloning artifact' 108 9 1 2CRQ PRO A 109 ? UNP Q9CZD5 ? ? 'cloning artifact' 109 10 1 2CRQ SER A 110 ? UNP Q9CZD5 ? ? 'cloning artifact' 110 11 1 2CRQ SER A 111 ? UNP Q9CZD5 ? ? 'cloning artifact' 111 12 1 2CRQ GLY A 112 ? UNP Q9CZD5 ? ? 'cloning artifact' 112 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.29mM peptidase_M10_N domain U-13C,15N; 20mM TrisHCl, 100mM NaCl, 1mM DTT, 0.02% NaN3, 0.05mM ZnCl2, 0.1mM NTA' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 INOVA Varian 900 ? 2 INOVA Varian 800 ? # _pdbx_nmr_refine.entry_id 2CRQ _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CRQ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CRQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20020425 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.901 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2CRQ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CRQ _struct.title 'Solution structure of C-terminal domain of RIKEN cDNA 2810012L14' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CRQ _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text ;ribosome, translation, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 25 ? LYS A 42 ? GLY A 25 LYS A 42 1 ? 18 HELX_P HELX_P2 2 SER A 59 ? GLN A 72 ? SER A 59 GLN A 72 1 ? 14 HELX_P HELX_P3 3 ARG A 88 ? GLY A 90 ? ARG A 88 GLY A 90 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 15 ? SER A 21 ? THR A 15 SER A 21 A 2 HIS A 45 ? LYS A 51 ? HIS A 45 LYS A 51 A 3 ALA A 92 ? ARG A 98 ? ALA A 92 ARG A 98 A 4 THR A 79 ? ILE A 87 ? THR A 79 ILE A 87 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 18 ? N LEU A 18 O GLN A 47 ? O GLN A 47 A 2 3 N VAL A 48 ? N VAL A 48 O CYS A 95 ? O CYS A 95 A 3 4 O ALA A 92 ? O ALA A 92 N ILE A 87 ? N ILE A 87 # _database_PDB_matrix.entry_id 2CRQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CRQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 MET 14 14 14 MET MET A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 TRP 39 39 39 TRP TRP A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 MET 94 94 94 MET MET A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 GLY 112 112 112 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 12 ? ? -69.72 -173.12 2 1 ILE A 24 ? ? -34.00 132.54 3 1 LYS A 42 ? ? -85.09 30.26 4 1 LYS A 54 ? ? -61.96 86.11 5 1 ALA A 56 ? ? -38.13 156.56 6 1 PHE A 80 ? ? -65.41 76.10 7 1 LYS A 106 ? ? -99.45 30.22 8 1 SER A 110 ? ? -54.99 88.58 9 2 THR A 13 ? ? -55.70 88.54 10 2 PHE A 20 ? ? -172.24 138.90 11 2 LYS A 42 ? ? -88.78 34.94 12 2 ILE A 77 ? ? -134.98 -38.66 13 2 ARG A 88 ? ? 36.82 47.24 14 2 LEU A 100 ? ? -48.25 168.44 15 2 LYS A 106 ? ? -47.17 169.03 16 3 SER A 6 ? ? -60.20 97.68 17 3 THR A 13 ? ? -49.97 152.22 18 3 MET A 14 ? ? -172.13 118.84 19 3 ASN A 23 ? ? -91.17 39.13 20 3 PRO A 84 ? ? -69.72 97.18 21 3 LYS A 106 ? ? 37.41 33.51 22 4 ASN A 23 ? ? -87.75 46.28 23 4 GLU A 60 ? ? -36.18 -38.71 24 4 PHE A 67 ? ? -38.41 -35.68 25 4 LYS A 102 ? ? -93.64 45.30 26 5 THR A 13 ? ? -174.02 125.05 27 5 LEU A 29 ? ? -37.58 -30.88 28 5 GLN A 58 ? ? -35.01 146.56 29 5 SER A 59 ? ? -174.14 124.09 30 5 ILE A 77 ? ? -134.99 -34.89 31 5 PHE A 80 ? ? -63.50 89.53 32 5 SER A 101 ? ? -90.63 -70.84 33 5 LYS A 106 ? ? -47.90 89.72 34 6 SER A 2 ? ? -41.40 106.59 35 6 MET A 14 ? ? -174.04 142.96 36 6 PHE A 20 ? ? -170.67 142.17 37 6 LEU A 29 ? ? -39.87 -38.89 38 6 LYS A 42 ? ? -86.29 32.42 39 6 PHE A 80 ? ? -53.45 96.93 40 6 ARG A 83 ? ? -36.07 138.00 41 6 PRO A 84 ? ? -69.72 87.84 42 6 ARG A 88 ? ? 37.25 52.82 43 6 LEU A 100 ? ? -51.90 107.21 44 6 LYS A 102 ? ? -55.81 179.48 45 6 GLU A 105 ? ? -40.01 158.72 46 7 PRO A 12 ? ? -69.69 -179.16 47 7 LYS A 102 ? ? -55.02 178.63 48 7 PRO A 109 ? ? -69.77 95.74 49 8 LYS A 9 ? ? -131.87 -41.68 50 8 PHE A 20 ? ? -174.36 143.24 51 8 LYS A 42 ? ? -85.88 32.11 52 8 ALA A 56 ? ? -38.13 137.75 53 8 PHE A 67 ? ? -35.04 -37.86 54 8 ARG A 83 ? ? -33.97 137.69 55 8 SER A 101 ? ? -99.41 35.23 56 9 MET A 14 ? ? -170.21 144.68 57 9 LYS A 51 ? ? -59.76 95.02 58 9 ASP A 55 ? ? -91.59 38.77 59 9 GLN A 58 ? ? -69.16 -179.74 60 9 PHE A 67 ? ? -34.62 -35.92 61 9 PHE A 80 ? ? -68.94 83.99 62 9 ARG A 83 ? ? -34.06 138.56 63 9 GLU A 105 ? ? -43.66 105.46 64 9 LYS A 106 ? ? -36.71 121.97 65 9 SER A 110 ? ? 34.57 45.45 66 9 SER A 111 ? ? -59.41 83.30 67 10 SER A 5 ? ? -171.65 147.90 68 10 ILE A 24 ? ? -34.19 115.60 69 10 LYS A 42 ? ? -84.88 30.82 70 10 GLU A 57 ? ? -97.93 39.00 71 10 PHE A 80 ? ? -58.89 103.15 72 10 ARG A 83 ? ? -39.23 132.99 73 10 THR A 91 ? ? -134.83 -52.38 74 10 SER A 110 ? ? -107.34 -60.73 75 11 SER A 2 ? ? -131.62 -33.14 76 11 SER A 3 ? ? 39.53 49.70 77 11 LYS A 42 ? ? -99.89 35.65 78 11 SER A 59 ? ? -34.82 150.90 79 11 PHE A 80 ? ? -69.56 98.57 80 11 ARG A 83 ? ? -36.05 135.65 81 11 THR A 91 ? ? -38.17 -35.46 82 11 LEU A 100 ? ? -47.19 156.28 83 11 SER A 110 ? ? -160.52 114.97 84 12 MET A 14 ? ? -172.58 112.62 85 12 LYS A 42 ? ? -96.28 30.71 86 12 ARG A 52 ? ? -38.37 156.86 87 12 GLU A 57 ? ? -101.98 47.02 88 12 GLU A 61 ? ? -39.71 -36.96 89 12 PHE A 80 ? ? -51.80 97.28 90 12 ARG A 83 ? ? -34.72 137.32 91 12 PRO A 84 ? ? -69.70 93.49 92 12 THR A 91 ? ? -38.70 -26.03 93 12 SER A 101 ? ? -122.39 -57.96 94 12 LYS A 102 ? ? -99.17 -68.33 95 13 SER A 2 ? ? 38.34 42.59 96 13 ILE A 24 ? ? -35.48 139.30 97 13 ASP A 55 ? ? -101.17 51.20 98 13 GLU A 57 ? ? -84.76 41.70 99 13 GLN A 58 ? ? -41.29 151.97 100 13 ARG A 88 ? ? 47.32 26.65 101 13 LEU A 100 ? ? -53.75 109.43 102 13 SER A 101 ? ? -51.03 -179.62 103 14 ASN A 23 ? ? -36.92 -29.26 104 14 ILE A 24 ? ? -33.81 134.03 105 14 LYS A 42 ? ? -96.54 33.91 106 14 LYS A 54 ? ? 42.69 25.97 107 14 GLU A 57 ? ? -86.69 30.98 108 14 ARG A 83 ? ? -34.69 136.10 109 14 LEU A 100 ? ? -35.97 129.54 110 15 SER A 6 ? ? -97.64 -64.75 111 15 PRO A 8 ? ? -69.75 -178.01 112 15 PRO A 12 ? ? -69.74 -171.23 113 15 ASN A 23 ? ? -85.84 30.13 114 15 LYS A 42 ? ? -88.98 36.34 115 15 LYS A 43 ? ? 39.40 51.11 116 15 GLN A 58 ? ? -172.77 -177.14 117 15 GLU A 61 ? ? -37.17 -38.19 118 15 LEU A 100 ? ? -34.32 128.68 119 15 SER A 101 ? ? -56.17 179.93 120 16 SER A 3 ? ? -128.26 -53.13 121 16 PRO A 8 ? ? -69.84 2.82 122 16 LYS A 9 ? ? -35.19 119.74 123 16 ASN A 23 ? ? -88.41 38.75 124 16 LYS A 42 ? ? -96.81 34.86 125 16 LYS A 43 ? ? 38.33 50.62 126 16 ARG A 83 ? ? -34.33 136.33 127 16 SER A 101 ? ? -67.99 92.29 128 16 LYS A 102 ? ? 35.27 42.73 129 16 GLU A 104 ? ? 37.96 46.34 130 17 SER A 6 ? ? -44.59 92.33 131 17 PRO A 8 ? ? -69.76 2.72 132 17 LYS A 9 ? ? -36.62 144.78 133 17 PRO A 12 ? ? -69.85 -168.12 134 17 THR A 13 ? ? -39.98 141.05 135 17 MET A 14 ? ? -173.13 127.47 136 17 ILE A 24 ? ? -37.27 118.02 137 17 LYS A 42 ? ? -84.17 30.98 138 17 LYS A 43 ? ? 39.83 52.17 139 17 PHE A 67 ? ? -34.60 -36.65 140 17 PHE A 80 ? ? -41.98 98.65 141 17 GLU A 105 ? ? -63.48 97.99 142 17 SER A 107 ? ? -98.33 -61.00 143 17 SER A 110 ? ? -170.89 142.59 144 18 PRO A 8 ? ? -69.81 -173.48 145 18 THR A 13 ? ? 73.29 45.21 146 18 MET A 14 ? ? -167.86 116.73 147 18 ILE A 24 ? ? -36.44 138.70 148 18 LYS A 42 ? ? -88.60 38.69 149 18 LYS A 43 ? ? 32.01 53.13 150 18 SER A 59 ? ? -34.96 149.14 151 18 PHE A 80 ? ? -44.16 106.10 152 18 ARG A 83 ? ? -33.98 135.41 153 18 GLU A 105 ? ? -130.78 -57.12 154 19 MET A 14 ? ? -160.29 109.23 155 19 LYS A 42 ? ? -90.62 38.73 156 19 ALA A 56 ? ? -81.71 39.95 157 19 GLU A 57 ? ? 30.78 41.46 158 19 GLU A 65 ? ? -37.69 -38.37 159 19 PHE A 80 ? ? -54.57 108.12 160 19 ARG A 83 ? ? -34.02 138.33 161 19 THR A 91 ? ? -124.62 -51.27 162 20 ILE A 40 ? ? -37.82 -33.90 163 20 LYS A 54 ? ? -49.70 156.40 164 20 ASP A 55 ? ? 38.73 33.71 165 20 ALA A 56 ? ? -57.20 102.77 166 20 GLU A 57 ? ? -34.49 -75.77 167 20 SER A 59 ? ? -56.28 171.54 168 20 PHE A 80 ? ? -54.38 105.72 169 20 ARG A 83 ? ? -37.34 134.12 170 20 PRO A 84 ? ? -69.75 90.15 171 20 LEU A 100 ? ? -55.21 98.87 172 20 LYS A 102 ? ? -58.89 -178.63 173 20 LYS A 103 ? ? -83.73 36.78 174 20 GLU A 104 ? ? -62.84 -73.75 #