HEADER TRANSLATION 20-MAY-05 2CRQ TITLE SOLUTION STRUCTURE OF C-TERMINAL DOMAIN OF RIKEN CDNA 2810012L14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL TRANSLATIONAL INITIATION FACTOR 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PEPTIDASE_M10_N; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 2810012L14; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041012-09; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RIBOSOME, TRANSLATION, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CRQ 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CRQ 1 VERSN REVDAT 1 20-NOV-05 2CRQ 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF C-TERMINAL DOMAIN OF RIKEN CDNA JRNL TITL 2 2810012L14 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CRQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024550. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.29MM PEPTIDASE_M10_N DOMAIN U REMARK 210 -13C,15N; 20MM TRISHCL, 100MM REMARK 210 NACL, 1MM DTT, 0.02% NAN3, REMARK 210 0.05MM ZNCL2, 0.1MM NTA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.901, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 12 -173.12 -69.72 REMARK 500 1 ILE A 24 132.54 -34.00 REMARK 500 1 LYS A 42 30.26 -85.09 REMARK 500 1 LYS A 54 86.11 -61.96 REMARK 500 1 ALA A 56 156.56 -38.13 REMARK 500 1 PHE A 80 76.10 -65.41 REMARK 500 1 LYS A 106 30.22 -99.45 REMARK 500 1 SER A 110 88.58 -54.99 REMARK 500 2 THR A 13 88.54 -55.70 REMARK 500 2 PHE A 20 138.90 -172.24 REMARK 500 2 LYS A 42 34.94 -88.78 REMARK 500 2 ILE A 77 -38.66 -134.98 REMARK 500 2 ARG A 88 47.24 36.82 REMARK 500 2 LEU A 100 168.44 -48.25 REMARK 500 2 LYS A 106 169.03 -47.17 REMARK 500 3 SER A 6 97.68 -60.20 REMARK 500 3 THR A 13 152.22 -49.97 REMARK 500 3 MET A 14 118.84 -172.13 REMARK 500 3 ASN A 23 39.13 -91.17 REMARK 500 3 PRO A 84 97.18 -69.72 REMARK 500 3 LYS A 106 33.51 37.41 REMARK 500 4 ASN A 23 46.28 -87.75 REMARK 500 4 GLU A 60 -38.71 -36.18 REMARK 500 4 PHE A 67 -35.68 -38.41 REMARK 500 4 LYS A 102 45.30 -93.64 REMARK 500 5 THR A 13 125.05 -174.02 REMARK 500 5 LEU A 29 -30.88 -37.58 REMARK 500 5 GLN A 58 146.56 -35.01 REMARK 500 5 SER A 59 124.09 -174.14 REMARK 500 5 ILE A 77 -34.89 -134.99 REMARK 500 5 PHE A 80 89.53 -63.50 REMARK 500 5 SER A 101 -70.84 -90.63 REMARK 500 5 LYS A 106 89.72 -47.90 REMARK 500 6 SER A 2 106.59 -41.40 REMARK 500 6 MET A 14 142.96 -174.04 REMARK 500 6 PHE A 20 142.17 -170.67 REMARK 500 6 LEU A 29 -38.89 -39.87 REMARK 500 6 LYS A 42 32.42 -86.29 REMARK 500 6 PHE A 80 96.93 -53.45 REMARK 500 6 ARG A 83 138.00 -36.07 REMARK 500 6 PRO A 84 87.84 -69.72 REMARK 500 6 ARG A 88 52.82 37.25 REMARK 500 6 LEU A 100 107.21 -51.90 REMARK 500 6 LYS A 102 179.48 -55.81 REMARK 500 6 GLU A 105 158.72 -40.01 REMARK 500 7 PRO A 12 -179.16 -69.69 REMARK 500 7 LYS A 102 178.63 -55.02 REMARK 500 7 PRO A 109 95.74 -69.77 REMARK 500 8 LYS A 9 -41.68 -131.87 REMARK 500 8 PHE A 20 143.24 -174.36 REMARK 500 REMARK 500 THIS ENTRY HAS 174 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007014722.1 RELATED DB: TARGETDB DBREF 2CRQ A 8 106 UNP Q9CZD5 Q9CZD5_MOUSE 148 246 SEQADV 2CRQ GLY A 1 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 2 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 3 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ GLY A 4 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 5 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 6 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ GLY A 7 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 107 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ GLY A 108 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ PRO A 109 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 110 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ SER A 111 UNP Q9CZD5 CLONING ARTIFACT SEQADV 2CRQ GLY A 112 UNP Q9CZD5 CLONING ARTIFACT SEQRES 1 A 112 GLY SER SER GLY SER SER GLY PRO LYS THR GLY PRO THR SEQRES 2 A 112 MET THR LYS GLU LEU VAL PHE SER SER ASN ILE GLY GLN SEQRES 3 A 112 HIS ASP LEU ASP THR LYS SER LYS GLN ILE GLN GLN TRP SEQRES 4 A 112 ILE GLU LYS LYS TYR HIS VAL GLN VAL THR ILE LYS ARG SEQRES 5 A 112 ARG LYS ASP ALA GLU GLN SER GLU GLU GLU THR GLU GLU SEQRES 6 A 112 ILE PHE ASN GLN ILE LEU GLN THR MET PRO ASP ILE ALA SEQRES 7 A 112 THR PHE SER SER ARG PRO LYS ALA ILE ARG GLY GLY THR SEQRES 8 A 112 ALA SER MET CYS VAL PHE ARG HIS LEU SER LYS LYS GLU SEQRES 9 A 112 GLU LYS SER GLY PRO SER SER GLY HELIX 1 1 GLY A 25 LYS A 42 1 18 HELIX 2 2 SER A 59 GLN A 72 1 14 HELIX 3 3 ARG A 88 GLY A 90 5 3 SHEET 1 A 4 THR A 15 SER A 21 0 SHEET 2 A 4 HIS A 45 LYS A 51 1 O GLN A 47 N LEU A 18 SHEET 3 A 4 ALA A 92 ARG A 98 -1 O CYS A 95 N VAL A 48 SHEET 4 A 4 THR A 79 ILE A 87 -1 N ILE A 87 O ALA A 92 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1