data_2CS0 # _entry.id 2CS0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CS0 pdb_00002cs0 10.2210/pdb2cs0/pdb RCSB RCSB024557 ? ? WWPDB D_1000024557 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002014623.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CS0 _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kurosaki, C.' 1 'Hayashi, F.' 2 'Yoshida, M.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of the SH2 domain of human HSH2D protein' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kurosaki, C.' 1 ? primary 'Hayashi, F.' 2 ? primary 'Yoshida, M.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Hematopoietic SH2 domain containing' _entity.formula_weight 12927.429 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH2 domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEK VAHTSLDALVTFHQQKPIEPRRELLTQPCRQKDSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEK VAHTSLDALVTFHQQKPIEPRRELLTQPCRQKDSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002014623.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLY n 1 9 GLN n 1 10 LEU n 1 11 ALA n 1 12 GLN n 1 13 ASP n 1 14 GLY n 1 15 VAL n 1 16 PRO n 1 17 GLU n 1 18 TRP n 1 19 PHE n 1 20 HIS n 1 21 GLY n 1 22 ALA n 1 23 ILE n 1 24 SER n 1 25 ARG n 1 26 GLU n 1 27 ASP n 1 28 ALA n 1 29 GLU n 1 30 ASN n 1 31 LEU n 1 32 LEU n 1 33 GLU n 1 34 SER n 1 35 GLN n 1 36 PRO n 1 37 LEU n 1 38 GLY n 1 39 SER n 1 40 PHE n 1 41 LEU n 1 42 ILE n 1 43 ARG n 1 44 VAL n 1 45 SER n 1 46 HIS n 1 47 SER n 1 48 HIS n 1 49 VAL n 1 50 GLY n 1 51 TYR n 1 52 THR n 1 53 LEU n 1 54 SER n 1 55 TYR n 1 56 LYS n 1 57 ALA n 1 58 GLN n 1 59 SER n 1 60 SER n 1 61 CYS n 1 62 CYS n 1 63 HIS n 1 64 PHE n 1 65 MET n 1 66 VAL n 1 67 LYS n 1 68 LEU n 1 69 LEU n 1 70 ASP n 1 71 ASP n 1 72 GLY n 1 73 THR n 1 74 PHE n 1 75 MET n 1 76 ILE n 1 77 PRO n 1 78 GLY n 1 79 GLU n 1 80 LYS n 1 81 VAL n 1 82 ALA n 1 83 HIS n 1 84 THR n 1 85 SER n 1 86 LEU n 1 87 ASP n 1 88 ALA n 1 89 LEU n 1 90 VAL n 1 91 THR n 1 92 PHE n 1 93 HIS n 1 94 GLN n 1 95 GLN n 1 96 LYS n 1 97 PRO n 1 98 ILE n 1 99 GLU n 1 100 PRO n 1 101 ARG n 1 102 ARG n 1 103 GLU n 1 104 LEU n 1 105 LEU n 1 106 THR n 1 107 GLN n 1 108 PRO n 1 109 CYS n 1 110 ARG n 1 111 GLN n 1 112 LYS n 1 113 ASP n 1 114 SER n 1 115 GLY n 1 116 PRO n 1 117 SER n 1 118 SER n 1 119 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene HSH2D _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P041108-15 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q96JZ2_HUMAN _struct_ref.pdbx_db_accession Q96JZ2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLD ALVTFHQQKPIEPRRELLTQPCRQKD ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CS0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 113 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96JZ2 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 113 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CS0 GLY A 1 ? UNP Q96JZ2 ? ? 'cloning artifact' 1 1 1 2CS0 SER A 2 ? UNP Q96JZ2 ? ? 'cloning artifact' 2 2 1 2CS0 SER A 3 ? UNP Q96JZ2 ? ? 'cloning artifact' 3 3 1 2CS0 GLY A 4 ? UNP Q96JZ2 ? ? 'cloning artifact' 4 4 1 2CS0 SER A 5 ? UNP Q96JZ2 ? ? 'cloning artifact' 5 5 1 2CS0 SER A 6 ? UNP Q96JZ2 ? ? 'cloning artifact' 6 6 1 2CS0 GLY A 7 ? UNP Q96JZ2 ? ? 'cloning artifact' 7 7 1 2CS0 SER A 114 ? UNP Q96JZ2 ? ? 'cloning artifact' 114 8 1 2CS0 GLY A 115 ? UNP Q96JZ2 ? ? 'cloning artifact' 115 9 1 2CS0 PRO A 116 ? UNP Q96JZ2 ? ? 'cloning artifact' 116 10 1 2CS0 SER A 117 ? UNP Q96JZ2 ? ? 'cloning artifact' 117 11 1 2CS0 SER A 118 ? UNP Q96JZ2 ? ? 'cloning artifact' 118 12 1 2CS0 GLY A 119 ? UNP Q96JZ2 ? ? 'cloning artifact' 119 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.46mM 13C, 15N-labeled protein; 20mM d-Tris-Hcl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 INOVA Varian 800 ? 2 INOVA Varian 900 ? # _pdbx_nmr_refine.entry_id 2CS0 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CS0 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CS0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B. A.' 3 'data analysis' KUJIRA 0.9298 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2CS0 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CS0 _struct.title 'Solution structure of the SH2 domain of human HSH2D protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CS0 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;ALX, FLJ14886, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 24 ? SER A 34 ? SER A 24 SER A 34 1 ? 11 HELX_P HELX_P2 2 SER A 85 ? GLN A 94 ? SER A 85 GLN A 94 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 40 ? VAL A 44 ? PHE A 40 VAL A 44 A 2 TYR A 51 ? TYR A 55 ? TYR A 51 TYR A 55 A 3 CYS A 62 ? LEU A 68 ? CYS A 62 LEU A 68 A 4 PHE A 74 ? MET A 75 ? PHE A 74 MET A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 41 ? N LEU A 41 O SER A 54 ? O SER A 54 A 2 3 N TYR A 51 ? N TYR A 51 O VAL A 66 ? O VAL A 66 A 3 4 N LYS A 67 ? N LYS A 67 O MET A 75 ? O MET A 75 # _database_PDB_matrix.entry_id 2CS0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CS0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 TRP 18 18 18 TRP TRP A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 CYS 61 61 61 CYS CYS A . n A 1 62 CYS 62 62 62 CYS CYS A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 MET 75 75 75 MET MET A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 GLY 119 119 119 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 12 ? ? -109.43 42.32 2 1 HIS A 20 ? ? -90.04 39.67 3 1 ARG A 25 ? ? -34.61 -39.56 4 1 PRO A 77 ? ? -69.75 86.68 5 1 PRO A 97 ? ? -69.76 -166.51 6 1 THR A 106 ? ? -130.29 -55.28 7 1 GLN A 111 ? ? -49.12 162.97 8 2 VAL A 44 ? ? -37.30 135.27 9 2 LEU A 69 ? ? -51.47 -177.44 10 2 PRO A 77 ? ? -69.78 86.06 11 2 PRO A 97 ? ? -69.69 -167.79 12 2 THR A 106 ? ? -125.63 -57.72 13 2 LYS A 112 ? ? -52.87 171.83 14 3 HIS A 20 ? ? -87.78 38.15 15 3 VAL A 44 ? ? -34.11 133.25 16 3 HIS A 46 ? ? -131.58 -51.82 17 3 LEU A 69 ? ? -49.88 178.78 18 3 PRO A 97 ? ? -69.74 -169.77 19 3 THR A 106 ? ? -134.96 -62.06 20 3 LYS A 112 ? ? -103.57 41.81 21 4 SER A 2 ? ? 39.80 48.85 22 4 PRO A 16 ? ? -69.79 -177.66 23 4 HIS A 46 ? ? -125.78 -52.55 24 4 LEU A 69 ? ? -55.08 173.56 25 4 PRO A 77 ? ? -69.78 92.89 26 4 PRO A 97 ? ? -69.79 -171.50 27 4 THR A 106 ? ? -129.82 -59.47 28 4 GLN A 111 ? ? -42.22 157.89 29 4 LYS A 112 ? ? -37.04 132.52 30 4 SER A 114 ? ? -72.82 -74.31 31 5 SER A 2 ? ? -167.84 114.09 32 5 LEU A 10 ? ? -99.52 41.06 33 5 ASP A 13 ? ? -105.44 75.67 34 5 PRO A 16 ? ? -69.70 -174.99 35 5 ALA A 22 ? ? 34.79 37.76 36 5 ILE A 23 ? ? -50.51 170.28 37 5 VAL A 44 ? ? -33.95 130.68 38 5 VAL A 49 ? ? -84.79 33.30 39 5 PRO A 77 ? ? -69.66 84.94 40 5 PRO A 97 ? ? -69.82 -166.31 41 5 THR A 106 ? ? -129.69 -55.68 42 5 GLN A 111 ? ? -39.17 148.44 43 5 SER A 117 ? ? -34.60 145.62 44 6 SER A 2 ? ? -174.29 124.02 45 6 PRO A 16 ? ? -69.82 -176.86 46 6 HIS A 20 ? ? -85.93 34.96 47 6 LEU A 69 ? ? -55.32 176.71 48 6 PRO A 77 ? ? -69.74 80.37 49 6 PRO A 97 ? ? -69.76 -174.93 50 6 THR A 106 ? ? -130.27 -57.33 51 6 GLN A 111 ? ? -44.57 161.43 52 7 VAL A 44 ? ? -44.41 106.85 53 7 TYR A 55 ? ? -174.75 143.28 54 7 CYS A 61 ? ? -35.48 148.05 55 7 LEU A 69 ? ? -48.01 169.33 56 7 PRO A 77 ? ? -69.73 85.67 57 7 LYS A 80 ? ? -99.10 31.28 58 7 PRO A 97 ? ? -69.75 -164.08 59 7 GLN A 111 ? ? -46.02 172.64 60 7 LYS A 112 ? ? -101.13 65.82 61 7 ASP A 113 ? ? -175.15 137.63 62 7 PRO A 116 ? ? -69.75 90.91 63 8 SER A 3 ? ? -98.18 42.16 64 8 PRO A 16 ? ? -69.69 -179.77 65 8 HIS A 20 ? ? -84.84 39.93 66 8 VAL A 44 ? ? -39.01 112.42 67 8 VAL A 49 ? ? -61.70 94.51 68 8 CYS A 61 ? ? -34.62 135.90 69 8 PRO A 77 ? ? -69.83 82.59 70 8 PRO A 97 ? ? -69.78 -179.26 71 8 THR A 106 ? ? -127.24 -58.17 72 8 LYS A 112 ? ? -67.95 87.64 73 8 ASP A 113 ? ? -167.85 113.03 74 9 PRO A 16 ? ? -69.82 -179.55 75 9 HIS A 20 ? ? -99.33 41.77 76 9 TYR A 55 ? ? -172.19 147.98 77 9 LEU A 69 ? ? -44.23 161.56 78 9 PRO A 77 ? ? -69.75 81.71 79 9 GLN A 94 ? ? -49.04 -19.23 80 9 PRO A 97 ? ? -69.81 -170.97 81 9 THR A 106 ? ? -128.53 -58.48 82 9 ASP A 113 ? ? -173.88 135.93 83 10 SER A 2 ? ? 37.51 42.36 84 10 SER A 3 ? ? -53.95 175.93 85 10 LEU A 10 ? ? -92.25 44.28 86 10 ASP A 13 ? ? -173.80 132.19 87 10 GLN A 58 ? ? -35.79 -39.22 88 10 PRO A 77 ? ? -69.77 83.49 89 10 THR A 106 ? ? -122.84 -57.77 90 10 ASP A 113 ? ? -68.60 84.41 91 10 PRO A 116 ? ? -69.72 -178.50 92 11 SER A 6 ? ? -160.72 112.41 93 11 PRO A 16 ? ? -69.81 -165.41 94 11 SER A 34 ? ? -94.08 32.62 95 11 VAL A 44 ? ? -57.30 91.65 96 11 GLN A 58 ? ? -36.53 93.04 97 11 SER A 60 ? ? -175.73 117.94 98 11 LEU A 69 ? ? -45.25 170.34 99 11 PRO A 77 ? ? -69.70 82.72 100 11 PRO A 97 ? ? -69.75 -170.82 101 11 THR A 106 ? ? -134.39 -53.05 102 11 LYS A 112 ? ? -58.95 86.74 103 11 SER A 114 ? ? -130.39 -55.37 104 11 SER A 117 ? ? -97.60 59.75 105 12 SER A 2 ? ? -107.12 43.57 106 12 SER A 3 ? ? -134.61 -63.44 107 12 PRO A 16 ? ? -69.78 -163.81 108 12 VAL A 44 ? ? -37.28 133.85 109 12 HIS A 46 ? ? -122.59 -62.26 110 12 PRO A 77 ? ? -69.76 90.80 111 12 PRO A 97 ? ? -69.73 -168.35 112 12 THR A 106 ? ? -123.45 -54.48 113 12 LYS A 112 ? ? -42.13 95.00 114 13 ASP A 13 ? ? -173.03 115.33 115 13 HIS A 20 ? ? -86.44 40.03 116 13 ARG A 25 ? ? -34.63 -38.29 117 13 SER A 39 ? ? -52.37 106.30 118 13 VAL A 44 ? ? -34.73 138.07 119 13 VAL A 49 ? ? -41.81 108.41 120 13 LEU A 69 ? ? -51.93 -177.51 121 13 PRO A 77 ? ? -69.83 84.30 122 13 PRO A 97 ? ? -69.81 -168.12 123 13 THR A 106 ? ? -131.61 -59.33 124 13 LYS A 112 ? ? -58.64 170.88 125 13 PRO A 116 ? ? -69.76 -174.27 126 13 SER A 118 ? ? -171.57 136.60 127 14 SER A 2 ? ? 37.92 42.15 128 14 GLN A 12 ? ? -59.63 105.55 129 14 HIS A 20 ? ? -89.95 37.71 130 14 VAL A 44 ? ? -37.49 119.81 131 14 VAL A 49 ? ? -57.37 109.90 132 14 TYR A 55 ? ? -174.40 147.91 133 14 PRO A 77 ? ? -69.74 79.91 134 14 PRO A 97 ? ? -69.77 -174.32 135 14 THR A 106 ? ? -130.83 -57.78 136 15 HIS A 20 ? ? -96.11 39.86 137 15 ARG A 25 ? ? -39.63 -29.27 138 15 VAL A 44 ? ? -33.94 139.38 139 15 VAL A 49 ? ? 34.39 32.63 140 15 SER A 59 ? ? -74.62 -72.25 141 15 LEU A 69 ? ? -39.80 144.62 142 15 PRO A 77 ? ? -69.74 83.60 143 15 PRO A 97 ? ? -69.87 -175.60 144 15 THR A 106 ? ? -124.06 -55.12 145 15 GLN A 111 ? ? -54.51 172.54 146 15 LYS A 112 ? ? -85.06 34.50 147 15 SER A 114 ? ? -90.34 58.28 148 16 GLN A 12 ? ? -105.23 77.35 149 16 HIS A 20 ? ? -89.31 34.90 150 16 VAL A 44 ? ? -35.30 130.83 151 16 HIS A 48 ? ? -101.78 43.65 152 16 VAL A 49 ? ? 32.56 37.30 153 16 LEU A 69 ? ? -45.35 165.29 154 16 PRO A 77 ? ? -69.74 79.96 155 16 PRO A 97 ? ? -69.67 -167.80 156 16 THR A 106 ? ? -131.72 -58.57 157 16 LYS A 112 ? ? -60.32 -175.38 158 17 ASP A 13 ? ? -58.71 97.08 159 17 HIS A 20 ? ? -85.54 36.18 160 17 HIS A 46 ? ? -126.32 -55.71 161 17 TYR A 55 ? ? -175.23 145.08 162 17 PRO A 77 ? ? -69.74 85.15 163 17 PRO A 97 ? ? -69.77 -175.89 164 17 ARG A 102 ? ? -85.05 36.93 165 17 THR A 106 ? ? -133.69 -62.38 166 17 SER A 114 ? ? -175.05 122.29 167 18 PRO A 16 ? ? -69.77 -172.97 168 18 HIS A 20 ? ? -88.50 33.92 169 18 VAL A 44 ? ? -34.90 128.95 170 18 TYR A 55 ? ? -175.08 148.41 171 18 LEU A 69 ? ? -52.31 175.23 172 18 PRO A 77 ? ? -69.73 94.92 173 18 PRO A 97 ? ? -69.78 -172.12 174 18 THR A 106 ? ? -134.56 -57.70 175 18 LYS A 112 ? ? -91.52 43.22 176 18 SER A 114 ? ? -90.33 41.51 177 19 SER A 2 ? ? 35.35 49.77 178 19 ALA A 11 ? ? -133.17 -38.40 179 19 HIS A 20 ? ? -82.30 42.17 180 19 ARG A 25 ? ? -35.52 -38.32 181 19 GLN A 58 ? ? -35.88 -38.96 182 19 LEU A 69 ? ? -49.48 177.19 183 19 PRO A 77 ? ? -69.75 80.97 184 19 PRO A 97 ? ? -69.79 -176.00 185 19 THR A 106 ? ? -129.25 -55.76 186 19 LYS A 112 ? ? -37.19 103.73 187 19 ASP A 113 ? ? -171.06 133.52 188 20 SER A 6 ? ? -174.26 116.33 189 20 PRO A 16 ? ? -69.80 -173.56 190 20 HIS A 20 ? ? -82.88 40.19 191 20 ARG A 25 ? ? -35.81 -34.66 192 20 LEU A 69 ? ? -51.55 -176.27 193 20 PRO A 77 ? ? -69.68 81.88 194 20 PRO A 97 ? ? -69.79 -175.88 195 20 THR A 106 ? ? -132.90 -60.51 196 20 LYS A 112 ? ? -85.65 47.10 #