HEADER OXIDOREDUCTASE 21-MAY-05 2CSG TITLE CRYSTAL STRUCTURE OF THE PUTATIVE OXIDOREDUCTASE FROM SALMONELLA TITLE 2 TYPHIMURIUM LT2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CYTOPLASMIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 99287; SOURCE 4 STRAIN: LT2; SOURCE 5 GENE: YBIU; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS OXIDOREDUCTASE, PENICILLIN, MONONUCLEAR FERROUS ENZYMES, ANTIBIOTIC KEYWDS 2 BIOSYNTHESIS, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,H.LI,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 14-FEB-24 2CSG 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2CSG 1 VERSN REVDAT 2 24-FEB-09 2CSG 1 VERSN REVDAT 1 05-JUL-05 2CSG 0 JRNL AUTH Y.KIM,H.LI,F.COLLART,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE PUTATIVE OXIDOREDUCTASE FROM JRNL TITL 2 SALMONELLA TYPHIMURIUM LT2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0000 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 95.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1727 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1130 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3301 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.14000 REMARK 3 B22 (A**2) : 1.14000 REMARK 3 B33 (A**2) : -1.70000 REMARK 3 B12 (A**2) : 0.57000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.022 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.344 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.247 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.831 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3596 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4922 ; 1.521 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 449 ; 7.063 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;38.747 ;23.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 571 ;21.371 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;22.663 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 511 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2887 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1810 ; 0.234 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.001 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.207 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2230 ; 0.619 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3535 ; 1.113 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1564 ; 1.311 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1383 ; 2.200 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2CSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16967 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.84800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, MLPHARE, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SUCCINIC ACID, HEPES, PEG MME 2000, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.21333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.42667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 70.42667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.21333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 AUTHOR STATES THAT BIOLOGICAL UNIT FOR THE PROTEIN REMARK 300 IS NOT YET KNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASP A 420 REMARK 465 VAL A 421 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 139 C - N - CA ANGL. DEV. = 19.9 DEGREES REMARK 500 PRO A 139 C - N - CD ANGL. DEV. = -15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 56 38.42 -91.29 REMARK 500 ILE A 137 119.29 -30.93 REMARK 500 TYR A 138 -125.47 -90.19 REMARK 500 HIS A 170 -112.12 33.76 REMARK 500 LYS A 173 -39.50 49.86 REMARK 500 LYS A 173 -42.41 49.86 REMARK 500 ASP A 205 -162.97 -100.13 REMARK 500 ALA A 208 -77.54 -127.67 REMARK 500 ALA A 238 112.91 -29.22 REMARK 500 HIS A 239 -13.10 75.29 REMARK 500 ASP A 249 116.19 -39.45 REMARK 500 ASN A 250 8.67 57.53 REMARK 500 SER A 255 53.22 -96.28 REMARK 500 GLN A 273 46.59 -88.13 REMARK 500 ASP A 335 170.26 -58.74 REMARK 500 ASN A 352 76.63 48.36 REMARK 500 PRO A 392 139.66 -37.20 REMARK 500 PRO A 392 139.63 -37.20 REMARK 500 ASN A 410 -172.28 -68.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR A 138 PRO A 139 -43.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 504 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 203 NE2 REMARK 620 2 ASP A 205 OD2 103.4 REMARK 620 3 HIS A 345 NE2 88.2 83.4 REMARK 620 4 ICT A 501 O1 102.0 98.6 168.8 REMARK 620 5 SIN A 502 O1 91.4 159.6 83.1 91.8 REMARK 620 6 SIN A 502 O2 149.5 105.9 86.9 81.9 58.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ICT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC23035 RELATED DB: TARGETDB DBREF 2CSG A 1 421 GB 16419348 AAL19777 1 421 SEQADV 2CSG SER A -2 GB 16419348 CLONING ARTIFACT SEQADV 2CSG ASN A -1 GB 16419348 CLONING ARTIFACT SEQADV 2CSG ALA A 0 GB 16419348 CLONING ARTIFACT SEQRES 1 A 424 SER ASN ALA MET THR THR PRO PHE THR HIS GLU THR LEU SEQRES 2 A 424 PRO ALA ASP PRO LYS ALA ALA ILE ARG GLN MET LYS GLN SEQRES 3 A 424 ALA LEU ARG ALA GLN ILE GLY ASP VAL GLN ALA VAL PHE SEQRES 4 A 424 ASP ARG LEU SER ALA THR ILE ALA ALA ARG VAL ALA GLU SEQRES 5 A 424 ILE ASN ASP LEU LYS ALA GLN GLY GLN PRO VAL TRP PRO SEQRES 6 A 424 ILE ILE PRO PHE SER GLU LEU ALA MET GLY ASN ILE SER SEQRES 7 A 424 ASP ALA THR ARG ALA GLU VAL LYS ARG ARG GLY CYS ALA SEQRES 8 A 424 VAL ILE LYS GLY HIS PHE PRO ARG GLU GLN ALA LEU ALA SEQRES 9 A 424 TRP ASP GLN SER MET LEU ASP TYR LEU ASP LYS ASN HIS SEQRES 10 A 424 PHE ASP GLU VAL TYR LYS GLY PRO GLY ASP ASN PHE PHE SEQRES 11 A 424 GLY THR LEU SER ALA SER ARG PRO GLU ILE TYR PRO VAL SEQRES 12 A 424 TYR TRP SER GLN ALA GLN MET GLN ALA ARG GLN SER GLU SEQRES 13 A 424 GLU MET ALA LEU ALA GLN SER PHE LEU ASN ARG LEU TRP SEQRES 14 A 424 GLN VAL GLU HIS ASP GLY LYS ARG TRP PHE ASN PRO ASP SEQRES 15 A 424 ILE SER ILE ILE TYR PRO ASP ARG ILE ARG ARG ARG PRO SEQRES 16 A 424 PRO GLY THR THR SER LYS GLY LEU GLY ALA HIS THR ASP SEQRES 17 A 424 SER GLY ALA LEU GLU ARG TRP LEU LEU PRO ALA TYR GLN SEQRES 18 A 424 GLN VAL PHE ALA SER VAL PHE ASN GLY ASN VAL GLU GLN SEQRES 19 A 424 TYR ASP PRO TRP ASN ALA ALA HIS ARG THR ASP VAL GLU SEQRES 20 A 424 GLU TYR THR VAL ASP ASN THR THR LYS CYS SER VAL PHE SEQRES 21 A 424 ARG THR PHE GLN GLY TRP THR ALA LEU SER ASP MET LEU SEQRES 22 A 424 PRO GLY GLN GLY LEU LEU HIS VAL VAL PRO ILE PRO GLU SEQRES 23 A 424 ALA MET ALA TYR ILE LEU LEU ARG PRO LEU LEU ASP ASP SEQRES 24 A 424 VAL PRO GLU ASP GLU LEU CYS GLY VAL ALA PRO GLY ARG SEQRES 25 A 424 VAL LEU PRO ILE SER GLU GLN TRP HIS PRO LEU LEU MET SEQRES 26 A 424 ALA ALA LEU THR SER ILE PRO PRO LEU GLU ALA GLY ASP SEQRES 27 A 424 SER VAL TRP TRP HIS CYS ASP VAL ILE HIS SER VAL ALA SEQRES 28 A 424 PRO VAL GLU ASN GLN GLN GLY TRP GLY ASN VAL MET TYR SEQRES 29 A 424 ILE PRO ALA ALA PRO MET CYS GLU LYS ASN LEU ALA TYR SEQRES 30 A 424 ALA ARG LYS VAL LYS ALA ALA LEU GLU THR GLY ALA SER SEQRES 31 A 424 PRO GLY ASP PHE PRO ARG GLU ASP TYR GLU THR THR TRP SEQRES 32 A 424 GLU GLY ARG PHE THR LEU ARG ASP LEU ASN ILE HIS GLY SEQRES 33 A 424 LYS ARG ALA LEU GLY ILE ASP VAL HET FE A 504 1 HET ICT A 501 13 HET SIN A 502 8 HET CIT A 503 13 HETNAM FE FE (III) ION HETNAM ICT ISOCITRIC ACID HETNAM SIN SUCCINIC ACID HETNAM CIT CITRIC ACID FORMUL 2 FE FE 3+ FORMUL 3 ICT C6 H8 O7 FORMUL 4 SIN C4 H6 O4 FORMUL 5 CIT C6 H8 O7 FORMUL 6 HOH *64(H2 O) HELIX 1 1 ASP A 13 GLY A 30 1 18 HELIX 2 2 ASP A 31 GLY A 57 1 27 HELIX 3 3 PRO A 65 MET A 71 1 7 HELIX 4 4 SER A 75 GLY A 86 1 12 HELIX 5 5 PRO A 95 ASN A 113 1 19 HELIX 6 6 HIS A 114 TYR A 119 1 6 HELIX 7 7 SER A 143 SER A 152 1 10 HELIX 8 8 SER A 152 ARG A 164 1 13 HELIX 9 9 LEU A 209 LEU A 214 1 6 HELIX 10 10 LEU A 214 PHE A 221 1 8 HELIX 11 11 PHE A 221 ASN A 226 1 6 HELIX 12 12 ASN A 228 TYR A 232 5 5 HELIX 13 13 HIS A 239 VAL A 243 5 5 HELIX 14 14 ILE A 281 GLU A 283 5 3 HELIX 15 15 ALA A 284 ARG A 291 1 8 HELIX 16 16 PRO A 292 LEU A 294 5 3 HELIX 17 17 HIS A 318 ALA A 323 1 6 HELIX 18 18 CYS A 368 GLY A 385 1 18 HELIX 19 19 ASP A 395 THR A 399 5 5 HELIX 20 20 THR A 405 LEU A 409 5 5 HELIX 21 21 ASN A 410 LEU A 417 1 8 SHEET 1 A 5 CYS A 87 ILE A 90 0 SHEET 2 A 5 SER A 336 HIS A 340 -1 O SER A 336 N ILE A 90 SHEET 3 A 5 PHE A 260 ALA A 265 -1 N GLN A 261 O TRP A 339 SHEET 4 A 5 VAL A 359 TYR A 361 -1 O MET A 360 N THR A 264 SHEET 5 A 5 ILE A 188 ARG A 189 -1 N ARG A 189 O VAL A 359 SHEET 1 B 2 ASN A 177 SER A 181 0 SHEET 2 B 2 PRO A 366 MET A 367 -1 O MET A 367 N ASN A 177 SHEET 1 C 5 LEU A 311 PRO A 312 0 SHEET 2 C 5 LEU A 200 THR A 204 -1 N THR A 204 O LEU A 311 SHEET 3 C 5 HIS A 345 VAL A 347 -1 O VAL A 347 N LEU A 200 SHEET 4 C 5 LEU A 276 VAL A 278 -1 N HIS A 277 O SER A 346 SHEET 5 C 5 THR A 326 SER A 327 -1 O THR A 326 N VAL A 278 LINK NE2 HIS A 203 FE FE A 504 1555 1555 2.25 LINK OD2 ASP A 205 FE FE A 504 1555 1555 2.19 LINK NE2 HIS A 345 FE FE A 504 1555 1555 2.00 LINK O1 ICT A 501 FE FE A 504 1555 1555 2.24 LINK O1 SIN A 502 FE FE A 504 1555 1555 1.97 LINK O2 SIN A 502 FE FE A 504 1555 1555 2.46 CISPEP 1 GLY A 121 PRO A 122 0 18.54 SITE 1 AC1 5 HIS A 203 ASP A 205 HIS A 345 ICT A 501 SITE 2 AC1 5 SIN A 502 SITE 1 AC2 12 PHE A 126 PHE A 127 ASP A 186 ARG A 187 SITE 2 AC2 12 LEU A 200 HIS A 203 ASP A 205 THR A 252 SITE 3 AC2 12 PHE A 391 SIN A 502 FE A 504 HOH A 566 SITE 1 AC3 12 ARG A 189 LEU A 200 HIS A 203 GLN A 261 SITE 2 AC3 12 TRP A 263 LEU A 276 TRP A 339 HIS A 345 SITE 3 AC3 12 VAL A 347 TYR A 361 ICT A 501 FE A 504 SITE 1 AC4 4 ASP A 296 MET A 322 LEU A 325 HOH A 540 CRYST1 110.801 110.801 105.640 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009025 0.005211 0.000000 0.00000 SCALE2 0.000000 0.010421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009466 0.00000