HEADER SIGNALING PROTEIN 22-MAY-05 2CSO TITLE SOLUTION STRUCTURE OF THE DEP DOMAIN OF HUMAN PLECKSTRIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLECKSTRIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DEP DOMAIN; COMPND 5 SYNONYM: PLATELET P47 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLEK, P47; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040621-07; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS DEP DOMAIN, PLECKSTRIN, PLATELET P47 PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.INOUE,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CSO 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CSO 1 VERSN REVDAT 1 22-NOV-05 2CSO 0 JRNL AUTH K.INOUE,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE DEP DOMAIN OF HUMAN PLECKSTRIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CSO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024578. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.35MM U-15N, 13C-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9296, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SPECTROMETER_ID 1 FOR 3D_15N_SEPARATED_NOESY, REMARK 210 SPECTROMETER_ID 2 FOR 3D_13C_SEPARATED_NOESY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 88 -74.86 -62.94 REMARK 500 1 ASP A 103 47.43 33.72 REMARK 500 2 ASP A 40 49.11 35.79 REMARK 500 2 LYS A 90 -31.29 -37.63 REMARK 500 2 THR A 96 49.07 -92.18 REMARK 500 2 ASP A 103 44.54 33.20 REMARK 500 2 ASN A 121 100.38 -42.37 REMARK 500 2 SER A 122 109.33 -160.49 REMARK 500 2 PRO A 124 1.82 -69.77 REMARK 500 3 SER A 3 41.75 35.17 REMARK 500 3 LYS A 39 -74.90 -128.70 REMARK 500 3 LYS A 41 26.63 38.93 REMARK 500 3 ASP A 103 50.91 34.00 REMARK 500 3 GLU A 120 78.41 -60.48 REMARK 500 3 PRO A 124 98.72 -69.79 REMARK 500 3 SER A 126 106.06 -34.95 REMARK 500 4 SER A 5 42.94 -105.01 REMARK 500 4 MET A 88 -71.88 -47.29 REMARK 500 4 ASP A 94 48.27 -108.84 REMARK 500 4 GLU A 98 -35.80 -34.74 REMARK 500 4 ASP A 103 47.25 33.60 REMARK 500 4 SER A 122 -63.52 -94.07 REMARK 500 5 MET A 88 -73.22 -61.34 REMARK 500 5 ASP A 103 50.20 35.46 REMARK 500 5 PHE A 116 148.76 -37.08 REMARK 500 5 PRO A 124 98.83 -69.79 REMARK 500 6 ASP A 40 47.63 35.58 REMARK 500 6 LYS A 90 -27.83 -38.25 REMARK 500 6 ASP A 103 46.88 33.52 REMARK 500 6 ASN A 121 124.66 -36.96 REMARK 500 6 PRO A 124 89.31 -69.73 REMARK 500 6 SER A 126 113.87 -161.86 REMARK 500 7 SER A 5 88.90 -69.36 REMARK 500 7 LEU A 12 157.78 -47.30 REMARK 500 7 LYS A 39 -75.05 -82.43 REMARK 500 7 LYS A 41 26.67 39.83 REMARK 500 7 HIS A 46 26.31 49.55 REMARK 500 7 THR A 49 168.21 -47.88 REMARK 500 7 MET A 88 -72.65 -39.43 REMARK 500 7 GLU A 98 -39.11 -35.01 REMARK 500 7 ASP A 103 48.55 34.43 REMARK 500 7 GLU A 120 94.80 -38.72 REMARK 500 7 ASN A 121 163.83 -41.80 REMARK 500 8 SER A 2 143.40 -173.89 REMARK 500 8 ARG A 8 132.85 -173.77 REMARK 500 8 SER A 9 153.66 -47.96 REMARK 500 8 THR A 96 40.13 -86.64 REMARK 500 8 ASP A 103 43.78 -76.33 REMARK 500 9 SER A 6 56.82 -101.75 REMARK 500 9 PRO A 13 97.70 -69.78 REMARK 500 REMARK 500 THIS ENTRY HAS 133 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001003763.2 RELATED DB: TARGETDB DBREF 2CSO A 8 121 UNP P08567 PLEK_HUMAN 116 229 SEQADV 2CSO GLY A 1 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 2 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 3 UNP P08567 CLONING ARTIFACT SEQADV 2CSO GLY A 4 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 5 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 6 UNP P08567 CLONING ARTIFACT SEQADV 2CSO GLY A 7 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 122 UNP P08567 CLONING ARTIFACT SEQADV 2CSO GLY A 123 UNP P08567 CLONING ARTIFACT SEQADV 2CSO PRO A 124 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 125 UNP P08567 CLONING ARTIFACT SEQADV 2CSO SER A 126 UNP P08567 CLONING ARTIFACT SEQADV 2CSO GLY A 127 UNP P08567 CLONING ARTIFACT SEQRES 1 A 127 GLY SER SER GLY SER SER GLY ARG SER ILE ARG LEU PRO SEQRES 2 A 127 GLU THR ILE ASP LEU GLY ALA LEU TYR LEU SER MET LYS SEQRES 3 A 127 ASP THR GLU LYS GLY ILE LYS GLU LEU ASN LEU GLU LYS SEQRES 4 A 127 ASP LYS LYS ILE PHE ASN HIS CYS PHE THR GLY ASN CYS SEQRES 5 A 127 VAL ILE ASP TRP LEU VAL SER ASN GLN SER VAL ARG ASN SEQRES 6 A 127 ARG GLN GLU GLY LEU MET ILE ALA SER SER LEU LEU ASN SEQRES 7 A 127 GLU GLY TYR LEU GLN PRO ALA GLY ASP MET SER LYS SER SEQRES 8 A 127 ALA VAL ASP GLY THR ALA GLU ASN PRO PHE LEU ASP ASN SEQRES 9 A 127 PRO ASP ALA PHE TYR TYR PHE PRO ASP SER GLY PHE PHE SEQRES 10 A 127 CYS GLU GLU ASN SER GLY PRO SER SER GLY HELIX 1 1 ASP A 17 ASP A 27 1 11 HELIX 2 2 GLY A 50 ASN A 60 1 11 HELIX 3 3 ASN A 65 GLY A 80 1 16 HELIX 4 4 GLY A 86 GLY A 95 1 10 SHEET 1 A 4 LEU A 35 LYS A 39 0 SHEET 2 A 4 LYS A 42 THR A 49 -1 O LYS A 42 N LYS A 39 SHEET 3 A 4 PHE A 108 TYR A 110 -1 O TYR A 109 N PHE A 48 SHEET 4 A 4 GLN A 83 ALA A 85 -1 N GLN A 83 O TYR A 110 SHEET 1 B 3 LEU A 35 LYS A 39 0 SHEET 2 B 3 LYS A 42 THR A 49 -1 O LYS A 42 N LYS A 39 SHEET 3 B 3 CYS A 118 GLU A 120 -1 O GLU A 119 N ILE A 43 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1