data_2CSQ # _entry.id 2CSQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CSQ pdb_00002csq 10.2210/pdb2csq/pdb RCSB RCSB024580 ? ? WWPDB D_1000024580 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002000310.5 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CSQ _pdbx_database_status.recvd_initial_deposition_date 2005-05-22 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Inoue, K.' 1 'Hayashi, F.' 2 'Yokoyama, S.' 3 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 4 # _citation.id primary _citation.title 'Solution structure of the second SH3 domain of human RIM-binding protein 2' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Inoue, K.' 1 ? primary 'Hayashi, F.' 2 ? primary 'Yokoyama, S.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RIM binding protein 2' _entity.formula_weight 10343.274 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name RIM-BP2 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSE IQADDEEMMDQSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSE IQADDEEMMDQSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002000310.5 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 THR n 1 9 ASP n 1 10 PRO n 1 11 GLY n 1 12 ALA n 1 13 GLU n 1 14 GLU n 1 15 LEU n 1 16 PRO n 1 17 ALA n 1 18 ARG n 1 19 ILE n 1 20 PHE n 1 21 VAL n 1 22 ALA n 1 23 LEU n 1 24 PHE n 1 25 ASP n 1 26 TYR n 1 27 ASP n 1 28 PRO n 1 29 LEU n 1 30 THR n 1 31 MET n 1 32 SER n 1 33 PRO n 1 34 ASN n 1 35 PRO n 1 36 ASP n 1 37 ALA n 1 38 ALA n 1 39 GLU n 1 40 GLU n 1 41 GLU n 1 42 LEU n 1 43 PRO n 1 44 PHE n 1 45 LYS n 1 46 GLU n 1 47 GLY n 1 48 GLN n 1 49 ILE n 1 50 ILE n 1 51 LYS n 1 52 VAL n 1 53 TYR n 1 54 GLY n 1 55 ASP n 1 56 LYS n 1 57 ASP n 1 58 ALA n 1 59 ASP n 1 60 GLY n 1 61 PHE n 1 62 TYR n 1 63 ARG n 1 64 GLY n 1 65 GLU n 1 66 THR n 1 67 CYS n 1 68 ALA n 1 69 ARG n 1 70 LEU n 1 71 GLY n 1 72 LEU n 1 73 ILE n 1 74 PRO n 1 75 CYS n 1 76 ASN n 1 77 MET n 1 78 VAL n 1 79 SER n 1 80 GLU n 1 81 ILE n 1 82 GLN n 1 83 ALA n 1 84 ASP n 1 85 ASP n 1 86 GLU n 1 87 GLU n 1 88 MET n 1 89 MET n 1 90 ASP n 1 91 GLN n 1 92 SER n 1 93 GLY n 1 94 PRO n 1 95 SER n 1 96 SER n 1 97 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'KAZUSA cDNA hg00364' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040705-05 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RIMB2_HUMAN _struct_ref.pdbx_db_accession O15034 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQADDEE MMDQ ; _struct_ref.pdbx_align_begin 841 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CSQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 91 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O15034 _struct_ref_seq.db_align_beg 841 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 924 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 91 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CSQ GLY A 1 ? UNP O15034 ? ? 'cloning artifact' 1 1 1 2CSQ SER A 2 ? UNP O15034 ? ? 'cloning artifact' 2 2 1 2CSQ SER A 3 ? UNP O15034 ? ? 'cloning artifact' 3 3 1 2CSQ GLY A 4 ? UNP O15034 ? ? 'cloning artifact' 4 4 1 2CSQ SER A 5 ? UNP O15034 ? ? 'cloning artifact' 5 5 1 2CSQ SER A 6 ? UNP O15034 ? ? 'cloning artifact' 6 6 1 2CSQ GLY A 7 ? UNP O15034 ? ? 'cloning artifact' 7 7 1 2CSQ SER A 92 ? UNP O15034 ? ? 'cloning artifact' 92 8 1 2CSQ GLY A 93 ? UNP O15034 ? ? 'cloning artifact' 93 9 1 2CSQ PRO A 94 ? UNP O15034 ? ? 'cloning artifact' 94 10 1 2CSQ SER A 95 ? UNP O15034 ? ? 'cloning artifact' 95 11 1 2CSQ SER A 96 ? UNP O15034 ? ? 'cloning artifact' 96 12 1 2CSQ GLY A 97 ? UNP O15034 ? ? 'cloning artifact' 97 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.01mM U-15N, 13C-labeled protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CSQ _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CSQ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CSQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9296 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2CSQ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CSQ _struct.title 'Solution structure of the second SH3 domain of human RIM-binding protein 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CSQ _struct_keywords.pdbx_keywords ENDOCYTOSIS/EXOCYTOSIS _struct_keywords.text ;SH3 domain, RIM binding protein 2, RIM-BP2, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, ENDOCYTOSIS-EXOCYTOSIS COMPLEX ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 34 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 39 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 34 _struct_conf.end_auth_comp_id GLU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 39 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 69 ? PRO A 74 ? ARG A 69 PRO A 74 A 2 PHE A 61 ? THR A 66 ? PHE A 61 THR A 66 A 3 ILE A 49 ? LYS A 56 ? ILE A 49 LYS A 56 A 4 ARG A 18 ? VAL A 21 ? ARG A 18 VAL A 21 A 5 SER A 79 ? GLU A 80 ? SER A 79 GLU A 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 73 ? O ILE A 73 N TYR A 62 ? N TYR A 62 A 2 3 O ARG A 63 ? O ARG A 63 N TYR A 53 ? N TYR A 53 A 3 4 O VAL A 52 ? O VAL A 52 N ARG A 18 ? N ARG A 18 A 4 5 N VAL A 21 ? N VAL A 21 O SER A 79 ? O SER A 79 # _database_PDB_matrix.entry_id 2CSQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CSQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 MET 31 31 31 MET MET A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 MET 77 77 77 MET MET A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 MET 89 89 89 MET MET A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLY 97 97 97 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-22 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 3 ? ? -42.33 163.54 2 1 ASP A 9 ? ? -37.54 149.50 3 1 PHE A 44 ? ? -173.22 140.62 4 1 LYS A 51 ? ? -62.83 87.27 5 1 ASP A 85 ? ? -50.49 172.63 6 1 MET A 88 ? ? -50.03 174.51 7 1 SER A 95 ? ? -42.67 153.90 8 2 ALA A 12 ? ? -111.15 69.29 9 2 TYR A 53 ? ? -116.82 73.46 10 2 ARG A 63 ? ? -66.78 94.42 11 2 MET A 77 ? ? -74.81 -71.99 12 2 VAL A 78 ? ? -58.30 -178.44 13 2 MET A 89 ? ? -35.78 122.73 14 3 ALA A 12 ? ? -84.32 39.01 15 3 ARG A 18 ? ? -35.32 120.55 16 3 ASP A 25 ? ? -37.62 156.41 17 3 ARG A 63 ? ? -61.27 99.05 18 3 MET A 77 ? ? -88.72 -71.42 19 3 VAL A 78 ? ? -52.20 170.67 20 3 GLU A 87 ? ? -38.43 153.35 21 3 MET A 89 ? ? -52.12 96.12 22 3 GLN A 91 ? ? -34.48 136.79 23 4 SER A 2 ? ? -44.36 150.61 24 4 ASP A 55 ? ? -54.92 -176.26 25 4 ASP A 57 ? ? -64.21 -175.83 26 4 ARG A 63 ? ? -55.53 94.62 27 4 ALA A 68 ? ? 48.99 28.96 28 4 VAL A 78 ? ? -59.23 -179.48 29 4 ASP A 84 ? ? -124.90 -51.00 30 4 ASP A 85 ? ? -38.18 121.28 31 4 MET A 88 ? ? -83.71 35.33 32 5 PRO A 10 ? ? -69.74 90.65 33 5 GLU A 13 ? ? -45.30 165.94 34 5 ASP A 25 ? ? -43.35 153.80 35 5 MET A 31 ? ? -129.09 -55.82 36 5 LYS A 51 ? ? -68.55 97.36 37 5 ASP A 57 ? ? -51.86 -178.59 38 5 ARG A 63 ? ? -58.02 98.67 39 5 CYS A 67 ? ? 37.00 43.06 40 5 VAL A 78 ? ? -55.38 171.38 41 5 GLN A 82 ? ? -49.60 171.73 42 5 ASP A 85 ? ? -38.91 157.73 43 5 PRO A 94 ? ? -69.77 -179.64 44 5 SER A 96 ? ? -45.66 167.98 45 6 GLU A 13 ? ? 34.45 40.41 46 6 ARG A 18 ? ? -47.38 102.61 47 6 LYS A 56 ? ? -55.66 178.76 48 6 ARG A 63 ? ? -59.97 99.62 49 6 CYS A 67 ? ? 49.73 27.35 50 6 VAL A 78 ? ? -55.17 176.90 51 6 SER A 92 ? ? -55.02 172.63 52 7 PRO A 10 ? ? -69.76 99.96 53 7 LEU A 15 ? ? -46.07 156.14 54 7 ASP A 25 ? ? -45.41 151.05 55 7 MET A 31 ? ? -62.01 -72.92 56 7 ARG A 63 ? ? -54.74 99.08 57 7 MET A 77 ? ? -95.36 -70.50 58 7 VAL A 78 ? ? -57.60 179.53 59 7 ALA A 83 ? ? -51.63 109.63 60 7 ASP A 84 ? ? -91.06 54.46 61 7 ASP A 90 ? ? -37.98 135.02 62 8 PRO A 10 ? ? -69.73 -172.67 63 8 GLU A 13 ? ? -91.68 41.38 64 8 ARG A 63 ? ? -58.53 101.92 65 8 MET A 77 ? ? -126.04 -67.13 66 8 VAL A 78 ? ? -58.67 178.91 67 8 ALA A 83 ? ? -174.46 125.06 68 8 ASP A 85 ? ? -56.39 -177.08 69 8 SER A 92 ? ? -51.42 174.10 70 8 PRO A 94 ? ? -69.74 -174.04 71 9 SER A 3 ? ? -48.42 173.94 72 9 ARG A 18 ? ? -34.83 108.01 73 9 ASP A 25 ? ? -39.84 160.50 74 9 MET A 77 ? ? -75.33 -70.80 75 9 VAL A 78 ? ? -51.20 174.38 76 9 ILE A 81 ? ? -78.61 -71.23 77 9 ASP A 84 ? ? -91.67 46.76 78 9 SER A 92 ? ? -52.84 94.14 79 10 PRO A 10 ? ? -69.73 -170.94 80 10 GLU A 13 ? ? 42.05 28.71 81 10 ARG A 18 ? ? -54.83 103.39 82 10 ARG A 63 ? ? -63.40 94.63 83 10 MET A 77 ? ? -93.61 -64.22 84 10 ASP A 85 ? ? -53.83 174.20 85 10 MET A 89 ? ? -39.53 124.44 86 10 PRO A 94 ? ? -69.79 0.19 87 11 GLU A 13 ? ? -37.03 132.51 88 11 ASP A 25 ? ? -39.12 138.94 89 11 ASP A 57 ? ? -61.64 -178.62 90 11 ARG A 63 ? ? -57.30 97.72 91 11 MET A 77 ? ? -75.54 -73.96 92 11 VAL A 78 ? ? -47.85 174.68 93 11 ASP A 85 ? ? -38.54 133.22 94 12 LYS A 56 ? ? -59.68 108.14 95 12 ASP A 57 ? ? -59.31 175.64 96 12 ARG A 63 ? ? -59.59 93.15 97 12 PRO A 74 ? ? -69.83 99.14 98 12 VAL A 78 ? ? -59.16 176.14 99 12 PRO A 94 ? ? -69.79 83.97 100 13 ARG A 63 ? ? -58.78 87.54 101 13 CYS A 67 ? ? 35.84 53.07 102 13 MET A 77 ? ? -69.31 -74.52 103 13 VAL A 78 ? ? -53.84 179.68 104 14 ALA A 12 ? ? -96.16 39.02 105 14 ASP A 25 ? ? -39.62 153.79 106 14 ARG A 63 ? ? -58.74 95.94 107 14 VAL A 78 ? ? -55.93 176.21 108 14 GLU A 87 ? ? -53.10 177.04 109 14 ASP A 90 ? ? -96.67 37.51 110 15 ASP A 25 ? ? -37.13 155.74 111 15 LEU A 70 ? ? -168.56 114.81 112 15 MET A 77 ? ? -106.25 -73.50 113 15 VAL A 78 ? ? -55.04 170.03 114 15 ASP A 84 ? ? -85.91 45.67 115 15 GLU A 86 ? ? -43.07 102.95 116 15 GLN A 91 ? ? -97.19 40.12 117 16 SER A 2 ? ? -50.99 109.57 118 16 ARG A 63 ? ? -62.22 94.28 119 16 CYS A 67 ? ? 49.98 27.64 120 16 MET A 77 ? ? -75.43 -71.13 121 16 VAL A 78 ? ? -54.44 -178.72 122 16 ALA A 83 ? ? -119.14 70.30 123 17 SER A 3 ? ? -37.17 115.38 124 17 SER A 5 ? ? -52.56 107.08 125 17 ALA A 12 ? ? -91.35 39.19 126 17 MET A 31 ? ? -97.35 -65.62 127 17 ARG A 63 ? ? -64.02 92.30 128 17 MET A 77 ? ? -94.47 -65.30 129 17 SER A 95 ? ? -40.85 105.78 130 18 SER A 2 ? ? -170.21 135.26 131 18 GLU A 13 ? ? -82.71 43.39 132 18 ASP A 25 ? ? -39.02 151.85 133 18 LEU A 29 ? ? -48.01 -19.36 134 18 ASP A 57 ? ? -50.01 179.04 135 18 ARG A 63 ? ? -55.09 96.14 136 18 MET A 77 ? ? -68.84 -73.70 137 18 VAL A 78 ? ? -54.23 179.98 138 18 ASP A 85 ? ? -43.94 157.71 139 18 ASP A 90 ? ? -50.24 170.83 140 19 ASP A 55 ? ? -59.92 179.37 141 19 ARG A 63 ? ? -56.89 93.34 142 19 VAL A 78 ? ? -56.05 176.14 143 19 GLN A 82 ? ? -52.03 175.34 144 19 MET A 89 ? ? -38.68 108.34 145 19 SER A 92 ? ? -173.54 132.27 146 20 SER A 5 ? ? -83.12 44.10 147 20 ALA A 12 ? ? -91.58 41.02 148 20 LEU A 15 ? ? -37.33 144.16 149 20 ASP A 57 ? ? -60.45 -178.30 150 20 ARG A 63 ? ? -62.08 93.49 151 20 THR A 66 ? ? -173.98 139.16 152 20 MET A 77 ? ? -84.24 -70.43 153 20 VAL A 78 ? ? -60.99 -178.96 154 20 ASP A 90 ? ? -46.66 151.02 #