HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-JUL-05 2CZ8 TITLE CRYSTAL STRUCTURE OF TT0972 PROTEIN FROM THERMUS THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TT0972 PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS DODECAMER, FLAVIN, FLAVIN-ADENINE DINUCLEOTIDE, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.KUMEI,E.INAGAKI,N.NAKANO,A.SHINKAI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 25-OCT-23 2CZ8 1 REMARK LINK REVDAT 3 13-JUL-11 2CZ8 1 VERSN REVDAT 2 24-FEB-09 2CZ8 1 VERSN REVDAT 1 19-SEP-06 2CZ8 0 JRNL AUTH M.KUMEI,E.INAGAKI,N.NAKANO,A.SHINKAI,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF TT0972 PROTEIN FROM THERMUS JRNL TITL 2 THERMOPHILUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 493873.290 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 96989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4913 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 15094 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 777 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4256 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 473 REMARK 3 SOLVENT ATOMS : 627 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : 0.33000 REMARK 3 B12 (A**2) : 0.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.04 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.08 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.260 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.030 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.060 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.070 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 65.65 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : SOL.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : SOL.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CZ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000024790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : BSS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96989 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1MOG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM, POTASSIUM PHOSPHATE, PH 5.8, REMARK 280 MICRO BATCH, TEMPERATURE 291K, MICROBATCH REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY MAY BE A DODECAMER GENERATED FROM REMARK 300 THE FOUR PROTOMERS IN THE ASYMMETRIC UNIT BY THE OPERATIONS:1-Y,X-Y, REMARK 300 Z AND 1-X+Y,1-X,Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 43670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -140.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 66.36000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 33.18000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 57.46945 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 44600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 66.36000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 33.18000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 57.46945 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A1150 LIES ON A SPECIAL POSITION. REMARK 375 P PO4 D2102 LIES ON A SPECIAL POSITION. REMARK 375 K K E1152 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2181 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2182 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2183 LIES ON A SPECIAL POSITION. REMARK 375 HOH F2180 LIES ON A SPECIAL POSITION. REMARK 375 HOH H2187 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 69 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 THR B 69 REMARK 465 MET C 1 REMARK 465 THR C 69 REMARK 465 MET D 1 REMARK 465 MET E 1 REMARK 465 MET F 1 REMARK 465 GLY F 2 REMARK 465 THR F 69 REMARK 465 MET G 1 REMARK 465 THR G 69 REMARK 465 MET H 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 54 -64.68 -94.70 REMARK 500 LYS C 54 -64.33 -92.11 REMARK 500 LYS D 54 -60.95 -95.64 REMARK 500 LYS F 54 -65.88 -94.92 REMARK 500 ALA G 51 42.27 -107.97 REMARK 500 LYS G 54 -64.14 -92.67 REMARK 500 LYS H 54 -61.33 -95.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1150 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 19 OE1 REMARK 620 2 GLU A 19 OE2 43.6 REMARK 620 3 GLU A 19 OE1 111.4 146.6 REMARK 620 4 GLU A 19 OE2 72.4 115.6 43.5 REMARK 620 5 GLU A 19 OE1 111.4 72.3 111.2 146.5 REMARK 620 6 GLU A 19 OE2 146.5 115.5 72.3 115.4 43.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C1151 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 19 OE2 REMARK 620 2 GLU B 19 OE1 40.4 REMARK 620 3 HOH B2185 O 64.7 28.6 REMARK 620 4 GLU C 19 OE2 119.8 152.0 139.4 REMARK 620 5 GLU C 19 OE1 76.5 115.6 128.8 44.6 REMARK 620 6 GLU D 19 OE1 143.7 110.0 82.0 76.4 118.4 REMARK 620 7 GLU D 19 OE2 109.9 70.5 45.6 117.5 152.4 41.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K E1152 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 19 OE2 REMARK 620 2 GLU E 19 OE1 43.7 REMARK 620 3 GLU E 19 OE1 146.3 111.2 REMARK 620 4 GLU E 19 OE2 115.4 72.1 43.5 REMARK 620 5 GLU E 19 OE1 72.2 111.4 111.2 146.2 REMARK 620 6 GLU E 19 OE2 115.4 146.4 72.0 115.2 43.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K G1153 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU F 19 OE2 REMARK 620 2 GLU F 19 OE1 40.3 REMARK 620 3 GLU G 19 OE1 75.2 114.4 REMARK 620 4 GLU G 19 OE2 119.0 151.7 45.2 REMARK 620 5 GLU H 19 OE1 144.1 110.2 120.6 77.7 REMARK 620 6 GLU H 19 OE2 109.8 70.5 154.3 118.9 41.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 2102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 E 2103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 H 2104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 2106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 F 2107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 H 2108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 G 2109 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 1151 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K E 1152 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K G 1153 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD D 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD E 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD F 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD G 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD H 1208 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000972.1 RELATED DB: TARGETDB DBREF 2CZ8 A 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 B 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 C 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 D 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 E 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 F 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 G 1 69 GB 55772813 BAD71254 1 69 DBREF 2CZ8 H 1 69 GB 55772813 BAD71254 1 69 SEQRES 1 A 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 A 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 A 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 A 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 A 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 A 69 LEU GLU GLU THR SEQRES 1 B 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 B 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 B 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 B 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 B 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 B 69 LEU GLU GLU THR SEQRES 1 C 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 C 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 C 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 C 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 C 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 C 69 LEU GLU GLU THR SEQRES 1 D 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 D 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 D 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 D 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 D 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 D 69 LEU GLU GLU THR SEQRES 1 E 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 E 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 E 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 E 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 E 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 E 69 LEU GLU GLU THR SEQRES 1 F 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 F 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 F 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 F 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 F 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 F 69 LEU GLU GLU THR SEQRES 1 G 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 G 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 G 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 G 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 G 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 G 69 LEU GLU GLU THR SEQRES 1 H 69 MET GLY LYS VAL TYR LYS LYS VAL GLU LEU VAL GLY THR SEQRES 2 H 69 SER GLU GLU GLY LEU GLU ALA ALA ILE GLN ALA ALA LEU SEQRES 3 H 69 ALA ARG ALA ARG LYS THR LEU ARG HIS LEU ASP TRP PHE SEQRES 4 H 69 GLU VAL LYS GLU ILE ARG GLY THR ILE GLY GLU ALA GLY SEQRES 5 H 69 VAL LYS GLU TYR GLN VAL VAL LEU GLU VAL GLY PHE ARG SEQRES 6 H 69 LEU GLU GLU THR HET PO4 A2101 5 HET K A1150 1 HET FAD A1201 53 HET PO4 B2105 5 HET FAD B1202 53 HET K C1151 1 HET FAD C1203 53 HET PO4 D2102 5 HET PO4 D2106 5 HET FAD D1204 53 HET PO4 E2103 5 HET K E1152 1 HET FAD E1205 53 HET PO4 F2107 5 HET FAD F1206 53 HET PO4 G2109 5 HET K G1153 1 HET FAD G1207 53 HET PO4 H2104 5 HET PO4 H2108 5 HET FAD H1208 53 HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 9 PO4 9(O4 P 3-) FORMUL 10 K 4(K 1+) FORMUL 11 FAD 8(C27 H33 N9 O15 P2) FORMUL 30 HOH *627(H2 O) HELIX 1 1 GLY A 17 LEU A 33 1 17 HELIX 2 2 GLY B 17 LEU B 33 1 17 HELIX 3 3 GLY C 17 LEU C 33 1 17 HELIX 4 4 GLY D 17 LEU D 33 1 17 HELIX 5 5 GLY E 17 LEU E 33 1 17 HELIX 6 6 GLY F 17 LEU F 33 1 17 HELIX 7 7 GLY G 17 LYS G 31 1 15 HELIX 8 8 GLY H 17 LEU H 33 1 17 SHEET 1 A16 LEU A 36 GLY A 49 0 SHEET 2 A16 GLY A 52 ARG A 65 -1 O GLY A 52 N GLY A 49 SHEET 3 A16 VAL A 4 SER A 14 -1 N LYS A 6 O PHE A 64 SHEET 4 A16 VAL C 4 SER C 14 -1 O GLU C 9 N LYS A 7 SHEET 5 A16 VAL B 4 SER B 14 1 O GLU B 9 N LYS C 7 SHEET 6 A16 GLY B 52 ARG B 65 -1 N TYR B 56 O SER B 14 SHEET 7 A16 LEU B 36 GLY B 49 -1 N ASP B 37 O GLY B 63 SHEET 8 A16 GLY B 52 ARG B 65 -1 O GLY B 52 N GLY B 49 SHEET 9 A16 VAL B 4 SER B 14 -1 N LYS B 6 O PHE B 64 SHEET 10 A16 VAL A 4 SER A 14 -1 O GLU A 9 N LYS B 7 SHEET 11 A16 VAL C 4 SER C 14 -1 O GLU C 9 N LYS A 7 SHEET 12 A16 GLY C 52 ARG C 65 -1 N TYR C 56 O SER C 14 SHEET 13 A16 LEU C 36 GLY C 49 -1 N ASP C 37 O GLY C 63 SHEET 14 A16 LEU D 36 GLY D 49 -1 O ILE D 44 N VAL C 41 SHEET 15 A16 GLY D 52 ARG D 65 -1 O GLY D 52 N GLY D 49 SHEET 16 A16 TYR D 5 SER D 14 -1 N LYS D 6 O PHE D 64 SHEET 1 B16 LEU E 36 GLY E 49 0 SHEET 2 B16 GLY E 52 ARG E 65 -1 O GLY E 52 N GLY E 49 SHEET 3 B16 VAL E 4 SER E 14 -1 N LYS E 6 O PHE E 64 SHEET 4 B16 VAL G 4 SER G 14 -1 O GLU G 9 N LYS E 7 SHEET 5 B16 VAL F 4 SER F 14 1 O GLU F 9 N LYS G 7 SHEET 6 B16 GLY F 52 ARG F 65 -1 N TYR F 56 O SER F 14 SHEET 7 B16 LEU F 36 GLY F 49 -1 N ASP F 37 O GLY F 63 SHEET 8 B16 GLY F 52 ARG F 65 -1 O GLY F 52 N GLY F 49 SHEET 9 B16 VAL F 4 SER F 14 -1 N LYS F 6 O PHE F 64 SHEET 10 B16 VAL E 4 SER E 14 -1 O GLU E 9 N LYS F 7 SHEET 11 B16 VAL G 4 SER G 14 -1 O GLU G 9 N LYS E 7 SHEET 12 B16 VAL G 53 ARG G 65 -1 N TYR G 56 O SER G 14 SHEET 13 B16 LEU G 36 ILE G 48 -1 N ASP G 37 O GLY G 63 SHEET 14 B16 LEU H 36 GLY H 49 -1 O ILE H 44 N VAL G 41 SHEET 15 B16 GLY H 52 ARG H 65 -1 O GLY H 52 N GLY H 49 SHEET 16 B16 TYR H 5 SER H 14 -1 N LYS H 6 O PHE H 64 LINK OE1 GLU A 19 K K A1150 1555 1555 2.78 LINK OE2 GLU A 19 K K A1150 1555 1555 3.08 LINK OE1 GLU A 19 K K A1150 3665 1555 2.78 LINK OE2 GLU A 19 K K A1150 3665 1555 3.08 LINK OE1 GLU A 19 K K A1150 2655 1555 2.78 LINK OE2 GLU A 19 K K A1150 2655 1555 3.09 LINK OE2AGLU B 19 K K C1151 2655 1555 3.29 LINK OE1AGLU B 19 K K C1151 2655 1555 3.00 LINK O BHOH B2185 K K C1151 2655 1555 3.53 LINK OE2 GLU C 19 K K C1151 1555 1555 3.07 LINK OE1 GLU C 19 K K C1151 1555 1555 2.59 LINK K K C1151 OE1 GLU D 19 1555 1555 2.76 LINK K K C1151 OE2 GLU D 19 1555 1555 3.26 LINK OE2 GLU E 19 K K E1152 1555 1555 3.06 LINK OE1 GLU E 19 K K E1152 1555 1555 2.78 LINK OE1 GLU E 19 K K E1152 3665 1555 2.79 LINK OE2 GLU E 19 K K E1152 3665 1555 3.07 LINK OE1 GLU E 19 K K E1152 2655 1555 2.78 LINK OE2 GLU E 19 K K E1152 2655 1555 3.07 LINK OE2AGLU F 19 K K G1153 2655 1555 3.31 LINK OE1AGLU F 19 K K G1153 2655 1555 3.00 LINK OE1 GLU G 19 K K G1153 1555 1555 2.57 LINK OE2 GLU G 19 K K G1153 1555 1555 3.04 LINK K K G1153 OE1 GLU H 19 1555 1555 2.72 LINK K K G1153 OE2 GLU H 19 1555 1555 3.26 SITE 1 AC1 7 LYS A 6 VAL A 8 HOH A2178 LYS B 6 SITE 2 AC1 7 VAL B 8 LYS C 6 VAL C 8 SITE 1 AC2 1 LYS D 6 SITE 1 AC3 9 LYS E 6 VAL E 8 HOH E2106 HOH E2125 SITE 2 AC3 9 HOH E2184 LYS F 6 VAL F 8 LYS G 6 SITE 3 AC3 9 VAL G 8 SITE 1 AC4 1 LYS H 6 SITE 1 AC5 8 THR B 13 SER B 14 GLU B 55 HOH B2127 SITE 2 AC5 8 HOH B2140 HOH B2170 GLY C 2 LYS C 3 SITE 1 AC6 8 GLY D 2 LYS D 3 THR D 13 SER D 14 SITE 2 AC6 8 GLU D 55 HOH D2138 HOH D2160 HOH D2179 SITE 1 AC7 7 THR F 13 SER F 14 GLU F 55 HOH F2134 SITE 2 AC7 7 HOH F2155 GLY G 2 LYS G 3 SITE 1 AC8 9 GLY H 2 LYS H 3 THR H 13 SER H 14 SITE 2 AC8 9 GLU H 55 HOH H2137 HOH H2165 HOH H2171 SITE 3 AC8 9 HOH H2177 SITE 1 AC9 8 GLY E 2 LYS E 3 THR G 13 SER G 14 SITE 2 AC9 8 GLU G 15 GLU G 55 HOH G2135 HOH G2166 SITE 1 BC1 1 GLU A 19 SITE 1 BC2 3 GLU B 19 GLU C 19 GLU D 19 SITE 1 BC3 1 GLU E 19 SITE 1 BC4 3 GLU F 19 GLU G 19 GLU H 19 SITE 1 BC5 22 LYS A 3 TYR A 5 LEU A 33 ARG A 34 SITE 2 BC5 22 HIS A 35 LEU A 36 ASP A 37 TRP A 38 SITE 3 BC5 22 ARG A 45 THR A 47 GLN A 57 ARG A 65 SITE 4 BC5 22 HOH A2110 HOH A2159 HOH A2160 HOH A2161 SITE 5 BC5 22 HOH A2163 HOH A2169 FAD B1202 VAL C 11 SITE 6 BC5 22 GLN C 57 VAL C 59 SITE 1 BC6 16 VAL A 11 GLN A 57 FAD A1201 LYS B 3 SITE 2 BC6 16 TYR B 5 HIS B 35 ASP B 37 TRP B 38 SITE 3 BC6 16 ARG B 65 HOH B2145 HOH B2161 HOH B2167 SITE 4 BC6 16 ARG C 45 THR C 47 GLN C 57 HOH C1257 SITE 1 BC7 20 GLN B 57 HOH B2150 HOH B2187 LYS C 3 SITE 2 BC7 20 TYR C 5 GLU C 16 HIS C 35 ASP C 37 SITE 3 BC7 20 TRP C 38 ARG C 65 HOH C1224 HOH C1269 SITE 4 BC7 20 HOH C1270 HOH C1279 HOH C1281 ARG D 45 SITE 5 BC7 20 THR D 47 GLN D 57 FAD D1204 HOH D2132 SITE 1 BC8 20 ARG B 45 THR B 47 ILE B 48 GLU B 50 SITE 2 BC8 20 GLN B 57 FAD C1203 LYS D 3 TYR D 5 SITE 3 BC8 20 VAL D 11 ARG D 34 HIS D 35 LEU D 36 SITE 4 BC8 20 ASP D 37 TRP D 38 GLN D 57 ARG D 65 SITE 5 BC8 20 HOH D2115 HOH D2174 GLU E 50 ALA E 51 SITE 1 BC9 22 LYS E 3 TYR E 5 ARG E 30 ARG E 34 SITE 2 BC9 22 HIS E 35 ASP E 37 TRP E 38 ARG E 45 SITE 3 BC9 22 THR E 47 GLN E 57 ARG E 65 HOH E2156 SITE 4 BC9 22 HOH E2164 HOH E2165 HOH E2166 HOH E2167 SITE 5 BC9 22 HOH E2181 FAD F1206 VAL G 11 GLN G 57 SITE 6 BC9 22 VAL G 59 HOH G2120 SITE 1 CC1 20 VAL E 11 GLN E 57 FAD E1205 LYS F 3 SITE 2 CC1 20 TYR F 5 ARG F 30 LEU F 33 ARG F 34 SITE 3 CC1 20 HIS F 35 LEU F 36 ASP F 37 TRP F 38 SITE 4 CC1 20 ARG F 65 HOH F2153 HOH F2159 HOH F2160 SITE 5 CC1 20 HOH F2167 ARG G 45 THR G 47 GLN G 57 SITE 1 CC2 19 GLN F 57 HOH F2182 LYS G 3 TYR G 5 SITE 2 CC2 19 GLU G 16 HIS G 35 ASP G 37 TRP G 38 SITE 3 CC2 19 ARG G 65 HOH G2122 HOH G2147 HOH G2164 SITE 4 CC2 19 HOH G2165 HOH G2176 HOH G2180 ARG H 45 SITE 5 CC2 19 THR H 47 GLN H 57 FAD H1208 SITE 1 CC3 17 ARG F 45 THR F 47 GLN F 57 FAD G1207 SITE 2 CC3 17 LYS H 3 TYR H 5 VAL H 11 ARG H 34 SITE 3 CC3 17 HIS H 35 LEU H 36 ASP H 37 TRP H 38 SITE 4 CC3 17 GLN H 57 VAL H 59 ARG H 65 HOH H2118 SITE 5 CC3 17 HOH H2181 CRYST1 66.360 66.360 124.566 90.00 90.00 120.00 P 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015069 0.008700 0.000000 0.00000 SCALE2 0.000000 0.017401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008028 0.00000