HEADER OXIDOREDUCTASE 31-AUG-05 2D1T TITLE CRYSTAL STRUCTURE OF THE THERMOSTABLE JAPANESE FIREFLY LUCIFERASE RED- TITLE 2 COLOR EMISSION S286N MUTANT COMPLEXED WITH HIGH-ENERGY INTERMEDIATE TITLE 3 ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LUCIFERIN 4-MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LUCIFERASE; COMPND 5 EC: 1.13.12.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LUCIOLA CRUCIATA; SOURCE 3 ORGANISM_COMMON: JAPANESE FIREFLY; SOURCE 4 ORGANISM_TAXID: 7051; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HB101; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PUC18 KEYWDS ALPHA/BETA, BETA BARREL, ALPHA+BETA, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.NAKATSU,S.ICHIYAMA,J.HIRATAKE,A.SALDANHA,N.KOBASHI,K.SAKATA,H.KATO, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 7 23-OCT-24 2D1T 1 REMARK REVDAT 6 15-NOV-23 2D1T 1 REMARK REVDAT 5 25-OCT-23 2D1T 1 REMARK REVDAT 4 10-NOV-21 2D1T 1 REMARK SEQADV REVDAT 3 25-DEC-19 2D1T 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2D1T 1 VERSN REVDAT 1 21-MAR-06 2D1T 0 JRNL AUTH T.NAKATSU,S.ICHIYAMA,J.HIRATAKE,A.SALDANHA,N.KOBASHI, JRNL AUTH 2 K.SAKATA,H.KATO JRNL TITL STRUCTURAL BASIS FOR THE SPECTRAL DIFFERENCE IN LUCIFERASE JRNL TITL 2 BIOLUMINESCENCE. JRNL REF NATURE V. 440 372 2006 JRNL REFN ISSN 0028-0836 JRNL PMID 16541080 JRNL DOI 10.1038/NATURE04542 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 90068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4734 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6285 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 313 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4111 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 843 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : -0.34000 REMARK 3 B33 (A**2) : 0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.064 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.036 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.922 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4254 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5775 ; 1.381 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 538 ; 5.701 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 670 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3141 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2134 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 639 ; 0.125 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 38 ; 0.158 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 48 ; 0.112 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2672 ; 0.651 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4342 ; 1.176 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1582 ; 1.909 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1433 ; 3.070 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2D1T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000024882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94838 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28300 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2D1S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, LITHIUM CHROLIDE, MAGNESIUM REMARK 280 CHLORIDE, HEPES, 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE, REMARK 280 PH 7.8, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.73400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.11950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 90.58700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.11950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.73400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 90.58700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 MET A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 ALA A 546 REMARK 465 LYS A 547 REMARK 465 MET A 548 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CE NZ REMARK 470 GLU A 22 CD OE1 OE2 REMARK 470 GLU A 34 OE1 OE2 REMARK 470 LYS A 38 CD CE NZ REMARK 470 TYR A 178 OH REMARK 470 GLN A 179 CD OE1 NE2 REMARK 470 LYS A 299 CD CE NZ REMARK 470 LYS A 305 CD CE NZ REMARK 470 LYS A 382 CD CE NZ REMARK 470 ARG A 388 NH1 NH2 REMARK 470 GLU A 408 CD OE1 OE2 REMARK 470 LYS A 411 CD CE NZ REMARK 470 GLU A 412 CG CD OE1 OE2 REMARK 470 LYS A 445 CE NZ REMARK 470 GLU A 539 CD OE1 OE2 REMARK 470 LYS A 543 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 234 108.36 -168.37 REMARK 500 THR A 348 -66.25 68.71 REMARK 500 LEU A 370 -3.10 77.89 REMARK 500 ASN A 406 68.62 -150.74 REMARK 500 ASP A 438 -179.72 -174.53 REMARK 500 LYS A 447 -130.04 49.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SLU A 2001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2D1R RELATED DB: PDB REMARK 900 T217I MUTANT WITH OLU REMARK 900 RELATED ID: 2D1S RELATED DB: PDB REMARK 900 T217I MUTANT WITH SLU REMARK 900 RELATED ID: MY_001000084.4 RELATED DB: TARGETDB DBREF 2D1T A 4 548 UNP P13129 LUCI_LUCCR 4 548 SEQADV 2D1T MET A 1 UNP P13129 DELETION SEQADV 2D1T GLU A 2 UNP P13129 DELETION SEQADV 2D1T ASN A 3 UNP P13129 DELETION SEQADV 2D1T CSO A 64 UNP P13129 CYS 64 MODIFIED RESIDUE SEQADV 2D1T ILE A 217 UNP P13129 THR 217 ENGINEERED MUTATION SEQADV 2D1T ASN A 286 UNP P13129 SER 286 ENGINEERED MUTATION SEQRES 1 A 548 MET GLU ASN MET GLU ASN ASP GLU ASN ILE VAL VAL GLY SEQRES 2 A 548 PRO LYS PRO PHE TYR PRO ILE GLU GLU GLY SER ALA GLY SEQRES 3 A 548 THR GLN LEU ARG LYS TYR MET GLU ARG TYR ALA LYS LEU SEQRES 4 A 548 GLY ALA ILE ALA PHE THR ASN ALA VAL THR GLY VAL ASP SEQRES 5 A 548 TYR SER TYR ALA GLU TYR LEU GLU LYS SER CYS CSO LEU SEQRES 6 A 548 GLY LYS ALA LEU GLN ASN TYR GLY LEU VAL VAL ASP GLY SEQRES 7 A 548 ARG ILE ALA LEU CYS SER GLU ASN CYS GLU GLU PHE PHE SEQRES 8 A 548 ILE PRO VAL ILE ALA GLY LEU PHE ILE GLY VAL GLY VAL SEQRES 9 A 548 ALA PRO THR ASN GLU ILE TYR THR LEU ARG GLU LEU VAL SEQRES 10 A 548 HIS SER LEU GLY ILE SER LYS PRO THR ILE VAL PHE SER SEQRES 11 A 548 SER LYS LYS GLY LEU ASP LYS VAL ILE THR VAL GLN LYS SEQRES 12 A 548 THR VAL THR THR ILE LYS THR ILE VAL ILE LEU ASP SER SEQRES 13 A 548 LYS VAL ASP TYR ARG GLY TYR GLN CYS LEU ASP THR PHE SEQRES 14 A 548 ILE LYS ARG ASN THR PRO PRO GLY TYR GLN ALA SER SER SEQRES 15 A 548 PHE LYS THR VAL GLU VAL ASP ARG LYS GLU GLN VAL ALA SEQRES 16 A 548 LEU ILE MET ASN SER SER GLY SER THR GLY LEU PRO LYS SEQRES 17 A 548 GLY VAL GLN LEU THR HIS GLU ASN ILE VAL THR ARG PHE SEQRES 18 A 548 SER HIS ALA ARG ASP PRO ILE TYR GLY ASN GLN VAL SER SEQRES 19 A 548 PRO GLY THR ALA VAL LEU THR VAL VAL PRO PHE HIS HIS SEQRES 20 A 548 GLY PHE GLY MET PHE THR THR LEU GLY TYR LEU ILE CYS SEQRES 21 A 548 GLY PHE ARG VAL VAL MET LEU THR LYS PHE ASP GLU GLU SEQRES 22 A 548 THR PHE LEU LYS THR LEU GLN ASP TYR LYS CYS THR ASN SEQRES 23 A 548 VAL ILE LEU VAL PRO THR LEU PHE ALA ILE LEU ASN LYS SEQRES 24 A 548 SER GLU LEU LEU ASN LYS TYR ASP LEU SER ASN LEU VAL SEQRES 25 A 548 GLU ILE ALA SER GLY GLY ALA PRO LEU SER LYS GLU VAL SEQRES 26 A 548 GLY GLU ALA VAL ALA ARG ARG PHE ASN LEU PRO GLY VAL SEQRES 27 A 548 ARG GLN GLY TYR GLY LEU THR GLU THR THR SER ALA ILE SEQRES 28 A 548 ILE ILE THR PRO GLU GLY ASP ASP LYS PRO GLY ALA SER SEQRES 29 A 548 GLY LYS VAL VAL PRO LEU PHE LYS ALA LYS VAL ILE ASP SEQRES 30 A 548 LEU ASP THR LYS LYS SER LEU GLY PRO ASN ARG ARG GLY SEQRES 31 A 548 GLU VAL CYS VAL LYS GLY PRO MET LEU MET LYS GLY TYR SEQRES 32 A 548 VAL ASN ASN PRO GLU ALA THR LYS GLU LEU ILE ASP GLU SEQRES 33 A 548 GLU GLY TRP LEU HIS THR GLY ASP ILE GLY TYR TYR ASP SEQRES 34 A 548 GLU GLU LYS HIS PHE PHE ILE VAL ASP ARG LEU LYS SER SEQRES 35 A 548 LEU ILE LYS TYR LYS GLY TYR GLN VAL PRO PRO ALA GLU SEQRES 36 A 548 LEU GLU SER VAL LEU LEU GLN HIS PRO SER ILE PHE ASP SEQRES 37 A 548 ALA GLY VAL ALA GLY VAL PRO ASP PRO VAL ALA GLY GLU SEQRES 38 A 548 LEU PRO GLY ALA VAL VAL VAL LEU GLU SER GLY LYS ASN SEQRES 39 A 548 MET THR GLU LYS GLU VAL MET ASP TYR VAL ALA SER GLN SEQRES 40 A 548 VAL SER ASN ALA LYS ARG LEU ARG GLY GLY VAL ARG PHE SEQRES 41 A 548 VAL ASP GLU VAL PRO LYS GLY LEU THR GLY LYS ILE ASP SEQRES 42 A 548 GLY ARG ALA ILE ARG GLU ILE LEU LYS LYS PRO VAL ALA SEQRES 43 A 548 LYS MET MODRES 2D1T CSO A 64 CYS S-HYDROXYCYSTEINE HET CSO A 64 7 HET CL A1001 1 HET CL A1002 1 HET SLU A2001 40 HETNAM CSO S-HYDROXYCYSTEINE HETNAM CL CHLORIDE ION HETNAM SLU 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE FORMUL 1 CSO C3 H7 N O3 S FORMUL 2 CL 2(CL 1-) FORMUL 4 SLU C21 H18 N8 O8 S3 FORMUL 5 HOH *843(H2 O) HELIX 1 1 SER A 24 GLY A 40 1 17 HELIX 2 2 TYR A 55 GLY A 73 1 19 HELIX 3 3 PHE A 90 GLY A 101 1 12 HELIX 4 4 THR A 112 LYS A 124 1 13 HELIX 5 5 GLY A 134 VAL A 145 1 12 HELIX 6 6 CYS A 165 ASN A 173 1 9 HELIX 7 7 GLN A 179 PHE A 183 5 5 HELIX 8 8 HIS A 214 ARG A 225 1 12 HELIX 9 9 HIS A 247 GLY A 261 1 15 HELIX 10 10 ASP A 271 TYR A 282 1 12 HELIX 11 11 VAL A 290 THR A 292 5 3 HELIX 12 12 LEU A 293 SER A 300 1 8 HELIX 13 13 LEU A 302 TYR A 306 5 5 HELIX 14 14 SER A 322 PHE A 333 1 12 HELIX 15 15 THR A 345 THR A 348 5 4 HELIX 16 16 ASN A 406 ILE A 414 1 9 HELIX 17 17 LYS A 441 LEU A 443 5 3 HELIX 18 18 PRO A 452 GLN A 462 1 11 HELIX 19 19 THR A 496 SER A 506 1 11 HELIX 20 20 SER A 509 ARG A 513 5 5 HELIX 21 21 ASP A 533 LYS A 543 1 11 SHEET 1 A 5 VAL A 11 VAL A 12 0 SHEET 2 A 5 LYS A 372 ILE A 376 -1 O ALA A 373 N VAL A 11 SHEET 3 A 5 GLY A 390 LYS A 395 -1 O CYS A 393 N LYS A 374 SHEET 4 A 5 LEU A 420 TYR A 428 -1 O LEU A 420 N VAL A 394 SHEET 5 A 5 PHE A 434 ARG A 439 -1 O ASP A 438 N ILE A 425 SHEET 1 B 9 ASP A 52 SER A 54 0 SHEET 2 B 9 ILE A 42 ASN A 46 -1 N PHE A 44 O TYR A 53 SHEET 3 B 9 ARG A 263 MET A 266 1 O VAL A 264 N ALA A 43 SHEET 4 B 9 ALA A 238 THR A 241 1 N VAL A 239 O VAL A 265 SHEET 5 B 9 ASN A 286 LEU A 289 1 O ASN A 286 N LEU A 240 SHEET 6 B 9 GLU A 313 GLY A 317 1 O ALA A 315 N VAL A 287 SHEET 7 B 9 ARG A 339 GLY A 343 1 O ARG A 339 N ILE A 314 SHEET 8 B 9 ALA A 350 ILE A 353 -1 O ILE A 351 N TYR A 342 SHEET 9 B 9 LYS A 366 VAL A 367 -1 O LYS A 366 N ILE A 353 SHEET 1 C 4 GLY A 103 THR A 107 0 SHEET 2 C 4 ARG A 79 CYS A 83 1 N ILE A 80 O GLY A 103 SHEET 3 C 4 ILE A 127 SER A 130 1 O PHE A 129 N ALA A 81 SHEET 4 C 4 THR A 150 ILE A 153 1 O VAL A 152 N VAL A 128 SHEET 1 D 3 VAL A 194 MET A 198 0 SHEET 2 D 3 VAL A 210 THR A 213 -1 O LEU A 212 N ALA A 195 SHEET 3 D 3 GLY A 402 TYR A 403 -1 O GLY A 402 N GLN A 211 SHEET 1 E 3 ILE A 466 ASP A 476 0 SHEET 2 E 3 GLY A 480 LEU A 489 -1 O LEU A 482 N VAL A 474 SHEET 3 E 3 VAL A 518 PHE A 520 1 O ARG A 519 N VAL A 487 LINK C CYS A 63 N CSO A 64 1555 1555 1.33 LINK C CSO A 64 N LEU A 65 1555 1555 1.33 SITE 1 AC1 6 SER A 201 GLY A 527 LEU A 528 THR A 529 SITE 2 AC1 6 GLY A 530 LYS A 531 SITE 1 AC2 5 SER A 201 GLY A 202 GLY A 527 LEU A 528 SITE 2 AC2 5 HOH A2139 SITE 1 AC3 25 SER A 200 SER A 201 HIS A 247 PHE A 249 SITE 2 AC3 25 THR A 253 ILE A 288 GLY A 318 ALA A 319 SITE 3 AC3 25 PRO A 320 GLN A 340 GLY A 341 TYR A 342 SITE 4 AC3 25 GLY A 343 LEU A 344 THR A 345 ALA A 350 SITE 5 AC3 25 ASP A 424 ARG A 439 LYS A 531 HOH A2002 SITE 6 AC3 25 HOH A2007 HOH A2099 HOH A2101 HOH A2172 SITE 7 AC3 25 HOH A2537 CRYST1 57.468 181.174 52.239 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017401 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005520 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019143 0.00000