data_2D3F # _entry.id 2D3F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D3F pdb_00002d3f 10.2210/pdb2d3f/pdb RCSB RCSB024938 ? ? WWPDB D_1000024938 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2CUO 'Collagen Model Peptide (Pro-Pro-Gly)9' unspecified PDB 1X1K 'Host-Guest Peptide (Pro-Pro-Gly)4-(Pro-Allohyp-Gly)-(Pro- Pro-Gly)4' unspecified PDB 1V4F 'Crystal Structures Of Collagen Model Peptides With Pro-Hyp-Gly Sequence At 1.3A' unspecified PDB 1V6Q 'Crystal Structures Of Collagen Model Peptides With Pro-Hyp-Gly Sequence At 1.3A' unspecified PDB 1V7H 'Crystal Structures Of Collagen Model Peptides With Pro-Hyp-Gly Sequence At 1.26A' unspecified PDB 2D3H 'CRYSTAL STRUCTURES OF COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D3F _pdbx_database_status.recvd_initial_deposition_date 2005-09-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, G.' 1 'Noguchi, K.' 2 'Okuyama, K.' 3 'Ebisuzaki, S.' 4 'Nishino, N.' 5 # _citation.id primary _citation.title ;High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering. ; _citation.journal_abbrev Biopolymers _citation.journal_volume 91 _citation.page_first 361 _citation.page_last 372 _citation.year 2009 _citation.journal_id_ASTM BIPMAA _citation.country US _citation.journal_id_ISSN 0006-3525 _citation.journal_id_CSD 0161 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19137577 _citation.pdbx_database_id_DOI 10.1002/bip.21138 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Okuyama, K.' 1 ? primary 'Hongo, C.' 2 ? primary 'Wu, G.' 3 ? primary 'Mizuno, K.' 4 ? primary 'Noguchi, K.' 5 ? primary 'Ebisuzaki, S.' 6 ? primary 'Tanaka, Y.' 7 ? primary 'Nishino, N.' 8 ? primary 'Bachinger, H.P.' 9 ? # _cell.entry_id 2D3F _cell.length_a 26.082 _cell.length_b 26.532 _cell.length_c 79.843 _cell.angle_alpha 90.00 _cell.angle_beta 89.97 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2D3F _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-PRO-HYP-GLY-(PRO-PRO-GLY)4' 2295.547 6 ? ? ? ? 2 water nat water 18.015 304 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'PPGPPGPPGPPGP(HYP)GPPGPPGPPGPPG' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPPGPPGPPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 PRO n 1 3 GLY n 1 4 PRO n 1 5 PRO n 1 6 GLY n 1 7 PRO n 1 8 PRO n 1 9 GLY n 1 10 PRO n 1 11 PRO n 1 12 GLY n 1 13 PRO n 1 14 HYP n 1 15 GLY n 1 16 PRO n 1 17 PRO n 1 18 GLY n 1 19 PRO n 1 20 PRO n 1 21 GLY n 1 22 PRO n 1 23 PRO n 1 24 GLY n 1 25 PRO n 1 26 PRO n 1 27 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'COLLAGEN MODEL PEPTIDE WAS CHEMICALLY SYSTHESIZED. Pro-Hyp-Gly guest in Pro-Pro-Gly host peptide.' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2D3F _struct_ref.pdbx_db_accession 2D3F _struct_ref.entity_id 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2D3F A 1 ? 27 ? 2D3F 1 ? 27 ? 1 27 2 1 2D3F B 1 ? 27 ? 2D3F 1 ? 27 ? 1 27 3 1 2D3F C 1 ? 27 ? 2D3F 1 ? 27 ? 1 27 4 1 2D3F D 1 ? 27 ? 2D3F 1 ? 27 ? 1 27 5 1 2D3F E 1 ? 27 ? 2D3F 1 ? 27 ? 1 27 6 1 2D3F F 1 ? 27 ? 2D3F 1 ? 27 ? 1 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # _exptl.entry_id 2D3F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.69 _exptl_crystal.density_percent_sol 27.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'PEG 400, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-06-25 _diffrn_detector.details '1.1-M-LONG BENT-PLANE MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Trianglualr Si(111) with an asymmetric angle of 7.8' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A _diffrn_source.pdbx_wavelength 0.978 _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 2D3F _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 26.53 _reflns.d_resolution_high 1.26 _reflns.number_obs 26765 _reflns.number_all ? _reflns.percent_possible_obs 89.3 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.87 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.26 _reflns_shell.d_res_low 1.31 _reflns_shell.percent_possible_all 93.7 _reflns_shell.Rmerge_I_obs 0.331 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 7.41 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2793 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2D3F _refine.ls_number_reflns_obs 22440 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 1.26 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters 9908 _refine.ls_number_restraints 12445 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;THE POLYMER STRUCTURE CAN BE GENERATED FROM THE SUBMITTED ASYMMETRIC UNIT BY APPLYING THE (0 0 1) TRANSLATION USING FRACTIONAL COORDINATES. BOTH UP- AND DOWN- PUCKERINGS WERE OBSERVED FOR PROLINE RING AT THE X POSITION OF THE GLY-X-Y SEQUENCE. ANISOTROPIC REFINEMENT REDUCED FREE R. ; _refine.pdbx_starting_model 'PDB 2CUO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2D3F _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 909.00 _refine_analyze.occupancy_sum_non_hydrogen 1272.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 968 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 304 _refine_hist.number_atoms_total 1272 _refine_hist.d_res_high 1.26 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.022 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0280 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.046 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.042 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.131 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.003 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.048 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.040 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2D3F _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1851 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1826 _pdbx_refine.free_R_factor_4sig_cutoff 0.235 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1122 _pdbx_refine.number_reflns_obs_4sig_cutoff 22440 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2D3F _struct.title 'Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Pro-Hyp-Gly-(Pro-Pro-Gly)4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D3F _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'COLLAGEN, TRIPLE-HELIX, HYDROXYPROLINE, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PRO 13 C ? ? ? 1_555 A HYP 14 N ? ? A PRO 13 A HYP 14 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale2 covale both ? A HYP 14 C ? ? ? 1_555 A GLY 15 N ? ? A HYP 14 A GLY 15 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale3 covale both ? B PRO 13 C ? ? ? 1_555 B HYP 14 N ? ? B PRO 13 B HYP 14 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale4 covale both ? B HYP 14 C ? ? ? 1_555 B GLY 15 N ? ? B HYP 14 B GLY 15 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? C PRO 13 C ? ? ? 1_555 C HYP 14 N ? ? C PRO 13 C HYP 14 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale6 covale both ? C HYP 14 C ? ? ? 1_555 C GLY 15 N ? ? C HYP 14 C GLY 15 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale7 covale both ? D PRO 13 C ? ? ? 1_555 D HYP 14 N ? ? D PRO 13 D HYP 14 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? D HYP 14 C ? ? ? 1_555 D GLY 15 N ? ? D HYP 14 D GLY 15 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale9 covale both ? E PRO 13 C ? ? ? 1_555 E HYP 14 N ? ? E PRO 13 E HYP 14 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? E HYP 14 C ? ? ? 1_555 E GLY 15 N ? ? E HYP 14 E GLY 15 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale11 covale both ? F PRO 13 C ? ? ? 1_555 F HYP 14 N ? ? F PRO 13 F HYP 14 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale12 covale both ? F HYP 14 C ? ? ? 1_555 F GLY 15 N ? ? F HYP 14 F GLY 15 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2D3F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2D3F _atom_sites.fract_transf_matrix[1][1] 0.038341 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000020 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.037690 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012525 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 HYP 14 14 14 HYP HYP A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 GLY 27 27 ? ? ? A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 PRO 2 2 2 PRO PRO B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 PRO 5 5 5 PRO PRO B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 PRO 8 8 8 PRO PRO B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 HYP 14 14 14 HYP HYP B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 PRO 17 17 17 PRO PRO B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 PRO 23 23 23 PRO PRO B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 PRO 25 25 25 PRO PRO B . n B 1 26 PRO 26 26 26 PRO PRO B . n B 1 27 GLY 27 27 ? ? ? B . n C 1 1 PRO 1 1 1 PRO PRO C . n C 1 2 PRO 2 2 2 PRO PRO C . n C 1 3 GLY 3 3 3 GLY GLY C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 PRO 5 5 5 PRO PRO C . n C 1 6 GLY 6 6 6 GLY GLY C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 PRO 8 8 8 PRO PRO C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 PRO 10 10 10 PRO PRO C . n C 1 11 PRO 11 11 11 PRO PRO C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 PRO 13 13 13 PRO PRO C . n C 1 14 HYP 14 14 14 HYP HYP C . n C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 PRO 16 16 16 PRO PRO C . n C 1 17 PRO 17 17 17 PRO PRO C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 PRO 19 19 19 PRO PRO C . n C 1 20 PRO 20 20 20 PRO PRO C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 PRO 23 23 23 PRO PRO C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 PRO 25 25 25 PRO PRO C . n C 1 26 PRO 26 26 26 PRO PRO C . n C 1 27 GLY 27 27 ? ? ? C . n D 1 1 PRO 1 1 1 PRO PRO D . n D 1 2 PRO 2 2 2 PRO PRO D . n D 1 3 GLY 3 3 3 GLY GLY D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 PRO 5 5 5 PRO PRO D . n D 1 6 GLY 6 6 6 GLY GLY D . n D 1 7 PRO 7 7 7 PRO PRO D . n D 1 8 PRO 8 8 8 PRO PRO D . n D 1 9 GLY 9 9 9 GLY GLY D . n D 1 10 PRO 10 10 10 PRO PRO D . n D 1 11 PRO 11 11 11 PRO PRO D . n D 1 12 GLY 12 12 12 GLY GLY D . n D 1 13 PRO 13 13 13 PRO PRO D . n D 1 14 HYP 14 14 14 HYP HYP D . n D 1 15 GLY 15 15 15 GLY GLY D . n D 1 16 PRO 16 16 16 PRO PRO D . n D 1 17 PRO 17 17 17 PRO PRO D . n D 1 18 GLY 18 18 18 GLY GLY D . n D 1 19 PRO 19 19 19 PRO PRO D . n D 1 20 PRO 20 20 20 PRO PRO D . n D 1 21 GLY 21 21 21 GLY GLY D . n D 1 22 PRO 22 22 22 PRO PRO D . n D 1 23 PRO 23 23 23 PRO PRO D . n D 1 24 GLY 24 24 24 GLY GLY D . n D 1 25 PRO 25 25 25 PRO PRO D . n D 1 26 PRO 26 26 26 PRO PRO D . n D 1 27 GLY 27 27 27 GLY GLY D . n E 1 1 PRO 1 1 1 PRO PRO E . n E 1 2 PRO 2 2 2 PRO PRO E . n E 1 3 GLY 3 3 3 GLY GLY E . n E 1 4 PRO 4 4 4 PRO PRO E . n E 1 5 PRO 5 5 5 PRO PRO E . n E 1 6 GLY 6 6 6 GLY GLY E . n E 1 7 PRO 7 7 7 PRO PRO E . n E 1 8 PRO 8 8 8 PRO PRO E . n E 1 9 GLY 9 9 9 GLY GLY E . n E 1 10 PRO 10 10 10 PRO PRO E . n E 1 11 PRO 11 11 11 PRO PRO E . n E 1 12 GLY 12 12 12 GLY GLY E . n E 1 13 PRO 13 13 13 PRO PRO E . n E 1 14 HYP 14 14 14 HYP HYP E . n E 1 15 GLY 15 15 15 GLY GLY E . n E 1 16 PRO 16 16 16 PRO PRO E . n E 1 17 PRO 17 17 17 PRO PRO E . n E 1 18 GLY 18 18 18 GLY GLY E . n E 1 19 PRO 19 19 19 PRO PRO E . n E 1 20 PRO 20 20 20 PRO PRO E . n E 1 21 GLY 21 21 21 GLY GLY E . n E 1 22 PRO 22 22 22 PRO PRO E . n E 1 23 PRO 23 23 23 PRO PRO E . n E 1 24 GLY 24 24 24 GLY GLY E . n E 1 25 PRO 25 25 25 PRO PRO E . n E 1 26 PRO 26 26 26 PRO PRO E . n E 1 27 GLY 27 27 27 GLY GLY E . n F 1 1 PRO 1 1 1 PRO PRO F . n F 1 2 PRO 2 2 2 PRO PRO F . n F 1 3 GLY 3 3 3 GLY GLY F . n F 1 4 PRO 4 4 4 PRO PRO F . n F 1 5 PRO 5 5 5 PRO PRO F . n F 1 6 GLY 6 6 6 GLY GLY F . n F 1 7 PRO 7 7 7 PRO PRO F . n F 1 8 PRO 8 8 8 PRO PRO F . n F 1 9 GLY 9 9 9 GLY GLY F . n F 1 10 PRO 10 10 10 PRO PRO F . n F 1 11 PRO 11 11 11 PRO PRO F . n F 1 12 GLY 12 12 12 GLY GLY F . n F 1 13 PRO 13 13 13 PRO PRO F . n F 1 14 HYP 14 14 14 HYP HYP F . n F 1 15 GLY 15 15 15 GLY GLY F . n F 1 16 PRO 16 16 16 PRO PRO F . n F 1 17 PRO 17 17 17 PRO PRO F . n F 1 18 GLY 18 18 18 GLY GLY F . n F 1 19 PRO 19 19 19 PRO PRO F . n F 1 20 PRO 20 20 20 PRO PRO F . n F 1 21 GLY 21 21 21 GLY GLY F . n F 1 22 PRO 22 22 22 PRO PRO F . n F 1 23 PRO 23 23 23 PRO PRO F . n F 1 24 GLY 24 24 24 GLY GLY F . n F 1 25 PRO 25 25 25 PRO PRO F . n F 1 26 PRO 26 26 26 PRO PRO F . n F 1 27 GLY 27 27 27 GLY GLY F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 HOH 1 1001 1001 HOH HOH A . G 2 HOH 2 1002 1002 HOH HOH A . G 2 HOH 3 1003 1003 HOH HOH A . G 2 HOH 4 1004 1004 HOH HOH A . G 2 HOH 5 1005 1005 HOH HOH A . G 2 HOH 6 1006 1006 HOH HOH A . G 2 HOH 7 1007 1007 HOH HOH A . G 2 HOH 8 1008 1008 HOH HOH A . G 2 HOH 9 1009 1009 HOH HOH A . G 2 HOH 10 1010 1010 HOH HOH A . G 2 HOH 11 1011 1011 HOH HOH A . G 2 HOH 12 1012 1012 HOH HOH A . G 2 HOH 13 1013 1013 HOH HOH A . G 2 HOH 14 1014 1014 HOH HOH A . G 2 HOH 15 1015 1015 HOH HOH A . G 2 HOH 16 1016 1016 HOH HOH A . G 2 HOH 17 1017 1017 HOH HOH A . G 2 HOH 18 1018 1018 HOH HOH A . G 2 HOH 19 1019 1019 HOH HOH A . G 2 HOH 20 1020 1020 HOH HOH A . G 2 HOH 21 1021 1021 HOH HOH A . G 2 HOH 22 1022 1022 HOH HOH A . G 2 HOH 23 1143 1143 HOH HOH A . G 2 HOH 24 1147 1147 HOH HOH A . G 2 HOH 25 1148 1148 HOH HOH A . G 2 HOH 26 1149 1149 HOH HOH A . G 2 HOH 27 1150 1150 HOH HOH A . G 2 HOH 28 1151 1151 HOH HOH A . G 2 HOH 29 1153 1153 HOH HOH A . G 2 HOH 30 1155 1155 HOH HOH A . G 2 HOH 31 1156 1156 HOH HOH A . G 2 HOH 32 1157 1157 HOH HOH A . G 2 HOH 33 1159 1159 HOH HOH A . G 2 HOH 34 1160 1160 HOH HOH A . G 2 HOH 35 1161 1161 HOH HOH A . G 2 HOH 36 1162 1162 HOH HOH A . G 2 HOH 37 1163 1163 HOH HOH A . G 2 HOH 38 1164 1164 HOH HOH A . G 2 HOH 39 1165 1165 HOH HOH A . G 2 HOH 40 1166 1166 HOH HOH A . G 2 HOH 41 1180 1180 HOH HOH A . G 2 HOH 42 1195 1195 HOH HOH A . G 2 HOH 43 1196 1196 HOH HOH A . G 2 HOH 44 1201 1201 HOH HOH A . G 2 HOH 45 1249 1249 HOH HOH A . G 2 HOH 46 1254 1254 HOH HOH A . G 2 HOH 47 1262 1262 HOH HOH A . G 2 HOH 48 1269 1269 HOH HOH A . G 2 HOH 49 1270 1270 HOH HOH A . G 2 HOH 50 1271 1271 HOH HOH A . G 2 HOH 51 1275 1275 HOH HOH A . G 2 HOH 52 1287 1287 HOH HOH A . G 2 HOH 53 1289 1289 HOH HOH A . G 2 HOH 54 1292 1292 HOH HOH A . G 2 HOH 55 1298 1298 HOH HOH A . G 2 HOH 56 1300 1300 HOH HOH A . H 2 HOH 1 1023 1023 HOH HOH B . H 2 HOH 2 1024 1024 HOH HOH B . H 2 HOH 3 1025 1025 HOH HOH B . H 2 HOH 4 1026 1026 HOH HOH B . H 2 HOH 5 1027 1027 HOH HOH B . H 2 HOH 6 1028 1028 HOH HOH B . H 2 HOH 7 1029 1029 HOH HOH B . H 2 HOH 8 1030 1030 HOH HOH B . H 2 HOH 9 1031 1031 HOH HOH B . H 2 HOH 10 1032 1032 HOH HOH B . H 2 HOH 11 1033 1033 HOH HOH B . H 2 HOH 12 1034 1034 HOH HOH B . H 2 HOH 13 1035 1035 HOH HOH B . H 2 HOH 14 1036 1036 HOH HOH B . H 2 HOH 15 1037 1037 HOH HOH B . H 2 HOH 16 1038 1038 HOH HOH B . H 2 HOH 17 1039 1039 HOH HOH B . H 2 HOH 18 1040 1040 HOH HOH B . H 2 HOH 19 1041 1041 HOH HOH B . H 2 HOH 20 1042 1042 HOH HOH B . H 2 HOH 21 1043 1043 HOH HOH B . H 2 HOH 22 1044 1044 HOH HOH B . H 2 HOH 23 1169 1169 HOH HOH B . H 2 HOH 24 1170 1170 HOH HOH B . H 2 HOH 25 1171 1171 HOH HOH B . H 2 HOH 26 1172 1172 HOH HOH B . H 2 HOH 27 1173 1173 HOH HOH B . H 2 HOH 28 1174 1174 HOH HOH B . H 2 HOH 29 1175 1175 HOH HOH B . H 2 HOH 30 1176 1176 HOH HOH B . H 2 HOH 31 1177 1177 HOH HOH B . H 2 HOH 32 1178 1178 HOH HOH B . H 2 HOH 33 1179 1179 HOH HOH B . H 2 HOH 34 1182 1182 HOH HOH B . H 2 HOH 35 1183 1183 HOH HOH B . H 2 HOH 36 1184 1184 HOH HOH B . H 2 HOH 37 1185 1185 HOH HOH B . H 2 HOH 38 1242 1242 HOH HOH B . H 2 HOH 39 1243 1243 HOH HOH B . H 2 HOH 40 1247 1247 HOH HOH B . H 2 HOH 41 1285 1285 HOH HOH B . H 2 HOH 42 1286 1286 HOH HOH B . H 2 HOH 43 1295 1295 HOH HOH B . H 2 HOH 44 1296 1296 HOH HOH B . H 2 HOH 45 1302 1302 HOH HOH B . H 2 HOH 46 1304 1304 HOH HOH B . I 2 HOH 1 1045 1045 HOH HOH C . I 2 HOH 2 1046 1046 HOH HOH C . I 2 HOH 3 1047 1047 HOH HOH C . I 2 HOH 4 1048 1048 HOH HOH C . I 2 HOH 5 1049 1049 HOH HOH C . I 2 HOH 6 1050 1050 HOH HOH C . I 2 HOH 7 1051 1051 HOH HOH C . I 2 HOH 8 1052 1052 HOH HOH C . I 2 HOH 9 1053 1053 HOH HOH C . I 2 HOH 10 1054 1054 HOH HOH C . I 2 HOH 11 1055 1055 HOH HOH C . I 2 HOH 12 1056 1056 HOH HOH C . I 2 HOH 13 1057 1057 HOH HOH C . I 2 HOH 14 1058 1058 HOH HOH C . I 2 HOH 15 1059 1059 HOH HOH C . I 2 HOH 16 1060 1060 HOH HOH C . I 2 HOH 17 1061 1061 HOH HOH C . I 2 HOH 18 1062 1062 HOH HOH C . I 2 HOH 19 1063 1063 HOH HOH C . I 2 HOH 20 1064 1064 HOH HOH C . I 2 HOH 21 1065 1065 HOH HOH C . I 2 HOH 22 1066 1066 HOH HOH C . I 2 HOH 23 1067 1067 HOH HOH C . I 2 HOH 24 1068 1068 HOH HOH C . I 2 HOH 25 1069 1069 HOH HOH C . I 2 HOH 26 1070 1070 HOH HOH C . I 2 HOH 27 1071 1071 HOH HOH C . I 2 HOH 28 1140 1140 HOH HOH C . I 2 HOH 29 1144 1144 HOH HOH C . I 2 HOH 30 1167 1167 HOH HOH C . I 2 HOH 31 1168 1168 HOH HOH C . I 2 HOH 32 1181 1181 HOH HOH C . I 2 HOH 33 1187 1187 HOH HOH C . I 2 HOH 34 1188 1188 HOH HOH C . I 2 HOH 35 1189 1189 HOH HOH C . I 2 HOH 36 1190 1190 HOH HOH C . I 2 HOH 37 1191 1191 HOH HOH C . I 2 HOH 38 1192 1192 HOH HOH C . I 2 HOH 39 1193 1193 HOH HOH C . I 2 HOH 40 1194 1194 HOH HOH C . I 2 HOH 41 1197 1197 HOH HOH C . I 2 HOH 42 1198 1198 HOH HOH C . I 2 HOH 43 1199 1199 HOH HOH C . I 2 HOH 44 1200 1200 HOH HOH C . I 2 HOH 45 1202 1202 HOH HOH C . I 2 HOH 46 1203 1203 HOH HOH C . I 2 HOH 47 1205 1205 HOH HOH C . I 2 HOH 48 1206 1206 HOH HOH C . I 2 HOH 49 1207 1207 HOH HOH C . I 2 HOH 50 1214 1214 HOH HOH C . I 2 HOH 51 1219 1219 HOH HOH C . I 2 HOH 52 1227 1227 HOH HOH C . I 2 HOH 53 1229 1229 HOH HOH C . I 2 HOH 54 1236 1236 HOH HOH C . I 2 HOH 55 1244 1244 HOH HOH C . I 2 HOH 56 1246 1246 HOH HOH C . I 2 HOH 57 1248 1248 HOH HOH C . I 2 HOH 58 1250 1250 HOH HOH C . I 2 HOH 59 1255 1255 HOH HOH C . I 2 HOH 60 1261 1261 HOH HOH C . I 2 HOH 61 1264 1264 HOH HOH C . I 2 HOH 62 1267 1267 HOH HOH C . I 2 HOH 63 1278 1278 HOH HOH C . I 2 HOH 64 1279 1279 HOH HOH C . I 2 HOH 65 1281 1281 HOH HOH C . I 2 HOH 66 1282 1282 HOH HOH C . I 2 HOH 67 1290 1290 HOH HOH C . I 2 HOH 68 1294 1294 HOH HOH C . I 2 HOH 69 1303 1303 HOH HOH C . J 2 HOH 1 1072 1072 HOH HOH D . J 2 HOH 2 1073 1073 HOH HOH D . J 2 HOH 3 1074 1074 HOH HOH D . J 2 HOH 4 1075 1075 HOH HOH D . J 2 HOH 5 1076 1076 HOH HOH D . J 2 HOH 6 1077 1077 HOH HOH D . J 2 HOH 7 1078 1078 HOH HOH D . J 2 HOH 8 1079 1079 HOH HOH D . J 2 HOH 9 1080 1080 HOH HOH D . J 2 HOH 10 1081 1081 HOH HOH D . J 2 HOH 11 1082 1082 HOH HOH D . J 2 HOH 12 1083 1083 HOH HOH D . J 2 HOH 13 1084 1084 HOH HOH D . J 2 HOH 14 1085 1085 HOH HOH D . J 2 HOH 15 1086 1086 HOH HOH D . J 2 HOH 16 1087 1087 HOH HOH D . J 2 HOH 17 1088 1088 HOH HOH D . J 2 HOH 18 1089 1089 HOH HOH D . J 2 HOH 19 1090 1090 HOH HOH D . J 2 HOH 20 1091 1091 HOH HOH D . J 2 HOH 21 1092 1092 HOH HOH D . J 2 HOH 22 1093 1093 HOH HOH D . J 2 HOH 23 1145 1145 HOH HOH D . J 2 HOH 24 1146 1146 HOH HOH D . J 2 HOH 25 1152 1152 HOH HOH D . J 2 HOH 26 1208 1208 HOH HOH D . J 2 HOH 27 1209 1209 HOH HOH D . J 2 HOH 28 1210 1210 HOH HOH D . J 2 HOH 29 1211 1211 HOH HOH D . J 2 HOH 30 1212 1212 HOH HOH D . J 2 HOH 31 1213 1213 HOH HOH D . J 2 HOH 32 1216 1216 HOH HOH D . J 2 HOH 33 1217 1217 HOH HOH D . J 2 HOH 34 1232 1232 HOH HOH D . J 2 HOH 35 1251 1251 HOH HOH D . J 2 HOH 36 1252 1252 HOH HOH D . J 2 HOH 37 1257 1257 HOH HOH D . J 2 HOH 38 1258 1258 HOH HOH D . J 2 HOH 39 1268 1268 HOH HOH D . J 2 HOH 40 1272 1272 HOH HOH D . J 2 HOH 41 1276 1276 HOH HOH D . J 2 HOH 42 1283 1283 HOH HOH D . J 2 HOH 43 1291 1291 HOH HOH D . J 2 HOH 44 1293 1293 HOH HOH D . J 2 HOH 45 1297 1297 HOH HOH D . J 2 HOH 46 1299 1299 HOH HOH D . K 2 HOH 1 1094 1094 HOH HOH E . K 2 HOH 2 1095 1095 HOH HOH E . K 2 HOH 3 1096 1096 HOH HOH E . K 2 HOH 4 1097 1097 HOH HOH E . K 2 HOH 5 1098 1098 HOH HOH E . K 2 HOH 6 1099 1099 HOH HOH E . K 2 HOH 7 1100 1100 HOH HOH E . K 2 HOH 8 1101 1101 HOH HOH E . K 2 HOH 9 1102 1102 HOH HOH E . K 2 HOH 10 1103 1103 HOH HOH E . K 2 HOH 11 1104 1104 HOH HOH E . K 2 HOH 12 1105 1105 HOH HOH E . K 2 HOH 13 1106 1106 HOH HOH E . K 2 HOH 14 1107 1107 HOH HOH E . K 2 HOH 15 1108 1108 HOH HOH E . K 2 HOH 16 1109 1109 HOH HOH E . K 2 HOH 17 1110 1110 HOH HOH E . K 2 HOH 18 1111 1111 HOH HOH E . K 2 HOH 19 1112 1112 HOH HOH E . K 2 HOH 20 1113 1113 HOH HOH E . K 2 HOH 21 1114 1114 HOH HOH E . K 2 HOH 22 1115 1115 HOH HOH E . K 2 HOH 23 1141 1141 HOH HOH E . K 2 HOH 24 1142 1142 HOH HOH E . K 2 HOH 25 1154 1154 HOH HOH E . K 2 HOH 26 1158 1158 HOH HOH E . K 2 HOH 27 1215 1215 HOH HOH E . K 2 HOH 28 1218 1218 HOH HOH E . K 2 HOH 29 1220 1220 HOH HOH E . K 2 HOH 30 1221 1221 HOH HOH E . K 2 HOH 31 1222 1222 HOH HOH E . K 2 HOH 32 1223 1223 HOH HOH E . K 2 HOH 33 1224 1224 HOH HOH E . K 2 HOH 34 1226 1226 HOH HOH E . K 2 HOH 35 1228 1228 HOH HOH E . K 2 HOH 36 1230 1230 HOH HOH E . K 2 HOH 37 1231 1231 HOH HOH E . K 2 HOH 38 1237 1237 HOH HOH E . K 2 HOH 39 1253 1253 HOH HOH E . K 2 HOH 40 1274 1274 HOH HOH E . K 2 HOH 41 1277 1277 HOH HOH E . K 2 HOH 42 1280 1280 HOH HOH E . K 2 HOH 43 1284 1284 HOH HOH E . K 2 HOH 44 1288 1288 HOH HOH E . L 2 HOH 1 1116 1116 HOH HOH F . L 2 HOH 2 1117 1117 HOH HOH F . L 2 HOH 3 1118 1118 HOH HOH F . L 2 HOH 4 1119 1119 HOH HOH F . L 2 HOH 5 1120 1120 HOH HOH F . L 2 HOH 6 1121 1121 HOH HOH F . L 2 HOH 7 1122 1122 HOH HOH F . L 2 HOH 8 1123 1123 HOH HOH F . L 2 HOH 9 1124 1124 HOH HOH F . L 2 HOH 10 1125 1125 HOH HOH F . L 2 HOH 11 1126 1126 HOH HOH F . L 2 HOH 12 1127 1127 HOH HOH F . L 2 HOH 13 1128 1128 HOH HOH F . L 2 HOH 14 1129 1129 HOH HOH F . L 2 HOH 15 1130 1130 HOH HOH F . L 2 HOH 16 1131 1131 HOH HOH F . L 2 HOH 17 1132 1132 HOH HOH F . L 2 HOH 18 1133 1133 HOH HOH F . L 2 HOH 19 1134 1134 HOH HOH F . L 2 HOH 20 1135 1135 HOH HOH F . L 2 HOH 21 1136 1136 HOH HOH F . L 2 HOH 22 1137 1137 HOH HOH F . L 2 HOH 23 1138 1138 HOH HOH F . L 2 HOH 24 1139 1139 HOH HOH F . L 2 HOH 25 1186 1186 HOH HOH F . L 2 HOH 26 1204 1204 HOH HOH F . L 2 HOH 27 1225 1225 HOH HOH F . L 2 HOH 28 1233 1233 HOH HOH F . L 2 HOH 29 1234 1234 HOH HOH F . L 2 HOH 30 1235 1235 HOH HOH F . L 2 HOH 31 1238 1238 HOH HOH F . L 2 HOH 32 1239 1239 HOH HOH F . L 2 HOH 33 1240 1240 HOH HOH F . L 2 HOH 34 1241 1241 HOH HOH F . L 2 HOH 35 1245 1245 HOH HOH F . L 2 HOH 36 1256 1256 HOH HOH F . L 2 HOH 37 1259 1259 HOH HOH F . L 2 HOH 38 1260 1260 HOH HOH F . L 2 HOH 39 1263 1263 HOH HOH F . L 2 HOH 40 1265 1265 HOH HOH F . L 2 HOH 41 1266 1266 HOH HOH F . L 2 HOH 42 1273 1273 HOH HOH F . L 2 HOH 43 1301 1301 HOH HOH F . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A HYP 14 A HYP 14 ? PRO 4-HYDROXYPROLINE 2 B HYP 14 B HYP 14 ? PRO 4-HYDROXYPROLINE 3 C HYP 14 C HYP 14 ? PRO 4-HYDROXYPROLINE 4 D HYP 14 D HYP 14 ? PRO 4-HYDROXYPROLINE 5 E HYP 14 E HYP 14 ? PRO 4-HYDROXYPROLINE 6 F HYP 14 F HYP 14 ? PRO 4-HYDROXYPROLINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 3 software_defined_assembly PISA hexameric 6 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I 2 1 D,E,F,J,K,L 3 1 A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4310 ? 1 MORE -27 ? 1 'SSA (A^2)' 4300 ? 2 'ABSA (A^2)' 4480 ? 2 MORE -28 ? 2 'SSA (A^2)' 4370 ? 3 'ABSA (A^2)' 9720 ? 3 MORE -70 ? 3 'SSA (A^2)' 7740 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CrystalClear 'data reduction' . ? 2 X-PLOR 'model building' . ? 3 SHELXL-97 refinement . ? 4 HKL-2000 'data reduction' . ? 5 CrystalClear 'data scaling' . ? 6 X-PLOR phasing . ? 7 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 27 ? A GLY 27 2 1 Y 1 B GLY 27 ? B GLY 27 3 1 Y 1 C GLY 27 ? C GLY 27 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal GLY N N N N 1 GLY CA C N N 2 GLY C C N N 3 GLY O O N N 4 GLY OXT O N N 5 GLY H H N N 6 GLY H2 H N N 7 GLY HA2 H N N 8 GLY HA3 H N N 9 GLY HXT H N N 10 HOH O O N N 11 HOH H1 H N N 12 HOH H2 H N N 13 HYP N N N N 14 HYP CA C N S 15 HYP C C N N 16 HYP O O N N 17 HYP CB C N N 18 HYP CG C N R 19 HYP CD C N N 20 HYP OD1 O N N 21 HYP OXT O N N 22 HYP H H N N 23 HYP HA H N N 24 HYP HB2 H N N 25 HYP HB3 H N N 26 HYP HG H N N 27 HYP HD22 H N N 28 HYP HD23 H N N 29 HYP HD1 H N N 30 HYP HXT H N N 31 PRO N N N N 32 PRO CA C N S 33 PRO C C N N 34 PRO O O N N 35 PRO CB C N N 36 PRO CG C N N 37 PRO CD C N N 38 PRO OXT O N N 39 PRO H H N N 40 PRO HA H N N 41 PRO HB2 H N N 42 PRO HB3 H N N 43 PRO HG2 H N N 44 PRO HG3 H N N 45 PRO HD2 H N N 46 PRO HD3 H N N 47 PRO HXT H N N 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLY N CA sing N N 1 GLY N H sing N N 2 GLY N H2 sing N N 3 GLY CA C sing N N 4 GLY CA HA2 sing N N 5 GLY CA HA3 sing N N 6 GLY C O doub N N 7 GLY C OXT sing N N 8 GLY OXT HXT sing N N 9 HOH O H1 sing N N 10 HOH O H2 sing N N 11 HYP N CA sing N N 12 HYP N CD sing N N 13 HYP N H sing N N 14 HYP CA C sing N N 15 HYP CA CB sing N N 16 HYP CA HA sing N N 17 HYP C O doub N N 18 HYP C OXT sing N N 19 HYP CB CG sing N N 20 HYP CB HB2 sing N N 21 HYP CB HB3 sing N N 22 HYP CG CD sing N N 23 HYP CG OD1 sing N N 24 HYP CG HG sing N N 25 HYP CD HD22 sing N N 26 HYP CD HD23 sing N N 27 HYP OD1 HD1 sing N N 28 HYP OXT HXT sing N N 29 PRO N CA sing N N 30 PRO N CD sing N N 31 PRO N H sing N N 32 PRO CA C sing N N 33 PRO CA CB sing N N 34 PRO CA HA sing N N 35 PRO C O doub N N 36 PRO C OXT sing N N 37 PRO CB CG sing N N 38 PRO CB HB2 sing N N 39 PRO CB HB3 sing N N 40 PRO CG CD sing N N 41 PRO CG HG2 sing N N 42 PRO CG HG3 sing N N 43 PRO CD HD2 sing N N 44 PRO CD HD3 sing N N 45 PRO OXT HXT sing N N 46 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CUO _pdbx_initial_refinement_model.details 'PDB 2CUO' #