data_2D4L # _entry.id 2D4L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D4L pdb_00002d4l 10.2210/pdb2d4l/pdb RCSB RCSB024979 ? ? WWPDB D_1000024979 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-07 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-20 5 'Structure model' 1 4 2017-10-11 6 'Structure model' 1 5 2021-11-10 7 'Structure model' 1 6 2023-10-25 8 'Structure model' 1 7 2023-11-15 9 'Structure model' 1 8 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' 10 7 'Structure model' 'Data collection' 11 7 'Structure model' 'Refinement description' 12 8 'Structure model' 'Data collection' 13 9 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' database_2 3 6 'Structure model' diffrn_source 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 7 'Structure model' chem_comp_atom 7 7 'Structure model' chem_comp_bond 8 7 'Structure model' pdbx_initial_refinement_model 9 8 'Structure model' chem_comp_atom 10 8 'Structure model' chem_comp_bond 11 9 'Structure model' pdbx_entry_details 12 9 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 6 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 6 'Structure model' '_struct_ref_seq_dif.details' 8 8 'Structure model' '_chem_comp_atom.atom_id' 9 8 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D4L _pdbx_database_status.recvd_initial_deposition_date 2005-10-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2AKV 'THE FULL LENGTH PROTEIN COMPLEXED WITH REACTION INTERMEDIATE' unspecified PDB 2D4M 'THE FULL LENGTH PROTEIN, APO' unspecified PDB 2D4N 'THE FULL LENGTH PROTEIN COMPLEXED WITH SUBSTRATE ANALOGUE' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nemeth, V.' 1 'Barabas, O.' 2 'Vertessy, G.B.' 3 # _citation.id primary _citation.title 'Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 35 _citation.page_first 495 _citation.page_last 505 _citation.year 2007 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17169987 _citation.pdbx_database_id_DOI 10.1093/nar/gkl1074 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nemeth-Pongracz, V.' 1 ? primary 'Barabas, O.' 2 ? primary 'Fuxreiter, M.' 3 ? primary 'Simon, I.' 4 ? primary 'Pichova, I.' 5 ? primary 'Rumlova, M.' 6 ? primary 'Zabranska, H.' 7 ? primary 'Svergun, D.' 8 ? primary 'Petoukhov, M.' 9 ? primary 'Harmat, V.' 10 ? primary 'Klement, E.' 11 ? primary 'Hunyadi-Gulyas, E.' 12 ? primary 'Medzihradszky, K.F.' 13 ? primary 'Konya, E.' 14 ? primary 'Vertessy, B.G.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DU 16171.373 1 3.6.1.23 N83K 'residues 83-234' ? 2 water nat water 18.015 124 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Deoxyuridine 5'-Triphosphate Nucleotido Hydrolase ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;KRVEGPAPGPETSLWGSQLCSSQQKQPISKLTRATPGSAGLDL(CSO)STSHTVLTPEMGPQALSTGIYGPLPPNTFGLI LGRSSITMKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVSQGNRIAQLILLPLIETDNKVQQPYRGQGSFGSSDIY ; _entity_poly.pdbx_seq_one_letter_code_can ;KRVEGPAPGPETSLWGSQLCSSQQKQPISKLTRATPGSAGLDLCSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRS SITMKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVSQGNRIAQLILLPLIETDNKVQQPYRGQGSFGSSDIY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ARG n 1 3 VAL n 1 4 GLU n 1 5 GLY n 1 6 PRO n 1 7 ALA n 1 8 PRO n 1 9 GLY n 1 10 PRO n 1 11 GLU n 1 12 THR n 1 13 SER n 1 14 LEU n 1 15 TRP n 1 16 GLY n 1 17 SER n 1 18 GLN n 1 19 LEU n 1 20 CYS n 1 21 SER n 1 22 SER n 1 23 GLN n 1 24 GLN n 1 25 LYS n 1 26 GLN n 1 27 PRO n 1 28 ILE n 1 29 SER n 1 30 LYS n 1 31 LEU n 1 32 THR n 1 33 ARG n 1 34 ALA n 1 35 THR n 1 36 PRO n 1 37 GLY n 1 38 SER n 1 39 ALA n 1 40 GLY n 1 41 LEU n 1 42 ASP n 1 43 LEU n 1 44 CSO n 1 45 SER n 1 46 THR n 1 47 SER n 1 48 HIS n 1 49 THR n 1 50 VAL n 1 51 LEU n 1 52 THR n 1 53 PRO n 1 54 GLU n 1 55 MET n 1 56 GLY n 1 57 PRO n 1 58 GLN n 1 59 ALA n 1 60 LEU n 1 61 SER n 1 62 THR n 1 63 GLY n 1 64 ILE n 1 65 TYR n 1 66 GLY n 1 67 PRO n 1 68 LEU n 1 69 PRO n 1 70 PRO n 1 71 ASN n 1 72 THR n 1 73 PHE n 1 74 GLY n 1 75 LEU n 1 76 ILE n 1 77 LEU n 1 78 GLY n 1 79 ARG n 1 80 SER n 1 81 SER n 1 82 ILE n 1 83 THR n 1 84 MET n 1 85 LYS n 1 86 GLY n 1 87 LEU n 1 88 GLN n 1 89 VAL n 1 90 TYR n 1 91 PRO n 1 92 GLY n 1 93 VAL n 1 94 ILE n 1 95 ASP n 1 96 ASN n 1 97 ASP n 1 98 TYR n 1 99 THR n 1 100 GLY n 1 101 GLU n 1 102 ILE n 1 103 LYS n 1 104 ILE n 1 105 MET n 1 106 ALA n 1 107 LYS n 1 108 ALA n 1 109 VAL n 1 110 ASN n 1 111 ASN n 1 112 ILE n 1 113 VAL n 1 114 THR n 1 115 VAL n 1 116 SER n 1 117 GLN n 1 118 GLY n 1 119 ASN n 1 120 ARG n 1 121 ILE n 1 122 ALA n 1 123 GLN n 1 124 LEU n 1 125 ILE n 1 126 LEU n 1 127 LEU n 1 128 PRO n 1 129 LEU n 1 130 ILE n 1 131 GLU n 1 132 THR n 1 133 ASP n 1 134 ASN n 1 135 LYS n 1 136 VAL n 1 137 GLN n 1 138 GLN n 1 139 PRO n 1 140 TYR n 1 141 ARG n 1 142 GLY n 1 143 GLN n 1 144 GLY n 1 145 SER n 1 146 PHE n 1 147 GLY n 1 148 SER n 1 149 SER n 1 150 ASP n 1 151 ILE n 1 152 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Betaretrovirus _entity_src_gen.pdbx_gene_src_gene gag-pro _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mason-Pfizer monkey virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11855 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 83 ? ? ? A . n A 1 2 ARG 2 84 ? ? ? A . n A 1 3 VAL 3 85 ? ? ? A . n A 1 4 GLU 4 86 ? ? ? A . n A 1 5 GLY 5 87 ? ? ? A . n A 1 6 PRO 6 88 ? ? ? A . n A 1 7 ALA 7 89 ? ? ? A . n A 1 8 PRO 8 90 ? ? ? A . n A 1 9 GLY 9 91 ? ? ? A . n A 1 10 PRO 10 92 ? ? ? A . n A 1 11 GLU 11 93 ? ? ? A . n A 1 12 THR 12 94 ? ? ? A . n A 1 13 SER 13 95 ? ? ? A . n A 1 14 LEU 14 96 ? ? ? A . n A 1 15 TRP 15 97 ? ? ? A . n A 1 16 GLY 16 98 ? ? ? A . n A 1 17 SER 17 99 ? ? ? A . n A 1 18 GLN 18 100 ? ? ? A . n A 1 19 LEU 19 101 ? ? ? A . n A 1 20 CYS 20 102 ? ? ? A . n A 1 21 SER 21 103 ? ? ? A . n A 1 22 SER 22 104 ? ? ? A . n A 1 23 GLN 23 105 ? ? ? A . n A 1 24 GLN 24 106 105 GLN GLN A . n A 1 25 LYS 25 107 106 LYS LYS A . n A 1 26 GLN 26 108 107 GLN GLN A . n A 1 27 PRO 27 109 108 PRO PRO A . n A 1 28 ILE 28 110 109 ILE ILE A . n A 1 29 SER 29 111 110 SER SER A . n A 1 30 LYS 30 112 111 LYS LYS A . n A 1 31 LEU 31 113 112 LEU LEU A . n A 1 32 THR 32 114 113 THR THR A . n A 1 33 ARG 33 115 114 ARG ARG A . n A 1 34 ALA 34 116 115 ALA ALA A . n A 1 35 THR 35 117 116 THR THR A . n A 1 36 PRO 36 118 117 PRO PRO A . n A 1 37 GLY 37 119 118 GLY GLY A . n A 1 38 SER 38 120 119 SER SER A . n A 1 39 ALA 39 121 120 ALA ALA A . n A 1 40 GLY 40 122 121 GLY GLY A . n A 1 41 LEU 41 123 122 LEU LEU A . n A 1 42 ASP 42 124 123 ASP ASP A . n A 1 43 LEU 43 125 124 LEU LEU A . n A 1 44 CSO 44 126 125 CSO CSO A . n A 1 45 SER 45 127 126 SER SER A . n A 1 46 THR 46 128 127 THR THR A . n A 1 47 SER 47 129 128 SER SER A . n A 1 48 HIS 48 130 129 HIS HIS A . n A 1 49 THR 49 131 130 THR THR A . n A 1 50 VAL 50 132 131 VAL VAL A . n A 1 51 LEU 51 133 132 LEU LEU A . n A 1 52 THR 52 134 133 THR THR A . n A 1 53 PRO 53 135 134 PRO PRO A . n A 1 54 GLU 54 136 135 GLU GLU A . n A 1 55 MET 55 137 136 MET MET A . n A 1 56 GLY 56 138 137 GLY GLY A . n A 1 57 PRO 57 139 138 PRO PRO A . n A 1 58 GLN 58 140 139 GLN GLN A . n A 1 59 ALA 59 141 140 ALA ALA A . n A 1 60 LEU 60 142 141 LEU LEU A . n A 1 61 SER 61 143 142 SER SER A . n A 1 62 THR 62 144 143 THR THR A . n A 1 63 GLY 63 145 144 GLY GLY A . n A 1 64 ILE 64 146 145 ILE ILE A . n A 1 65 TYR 65 147 146 TYR TYR A . n A 1 66 GLY 66 148 147 GLY GLY A . n A 1 67 PRO 67 149 148 PRO PRO A . n A 1 68 LEU 68 150 149 LEU LEU A . n A 1 69 PRO 69 151 150 PRO PRO A . n A 1 70 PRO 70 152 151 PRO PRO A . n A 1 71 ASN 71 153 152 ASN ASN A . n A 1 72 THR 72 154 153 THR THR A . n A 1 73 PHE 73 155 154 PHE PHE A . n A 1 74 GLY 74 156 155 GLY GLY A . n A 1 75 LEU 75 157 156 LEU LEU A . n A 1 76 ILE 76 158 157 ILE ILE A . n A 1 77 LEU 77 159 158 LEU LEU A . n A 1 78 GLY 78 160 159 GLY GLY A . n A 1 79 ARG 79 161 160 ARG ARG A . n A 1 80 SER 80 162 161 SER SER A . n A 1 81 SER 81 163 162 SER SER A . n A 1 82 ILE 82 164 163 ILE ILE A . n A 1 83 THR 83 165 164 THR THR A . n A 1 84 MET 84 166 165 MET MET A . n A 1 85 LYS 85 167 166 LYS LYS A . n A 1 86 GLY 86 168 167 GLY GLY A . n A 1 87 LEU 87 169 168 LEU LEU A . n A 1 88 GLN 88 170 169 GLN GLN A . n A 1 89 VAL 89 171 170 VAL VAL A . n A 1 90 TYR 90 172 171 TYR TYR A . n A 1 91 PRO 91 173 172 PRO PRO A . n A 1 92 GLY 92 174 173 GLY GLY A . n A 1 93 VAL 93 175 174 VAL VAL A . n A 1 94 ILE 94 176 175 ILE ILE A . n A 1 95 ASP 95 177 176 ASP ASP A . n A 1 96 ASN 96 178 177 ASN ASN A . n A 1 97 ASP 97 179 178 ASP ASP A . n A 1 98 TYR 98 180 179 TYR TYR A . n A 1 99 THR 99 181 180 THR THR A . n A 1 100 GLY 100 182 181 GLY GLY A . n A 1 101 GLU 101 183 182 GLU GLU A . n A 1 102 ILE 102 184 183 ILE ILE A . n A 1 103 LYS 103 185 184 LYS LYS A . n A 1 104 ILE 104 186 185 ILE ILE A . n A 1 105 MET 105 187 186 MET MET A . n A 1 106 ALA 106 188 187 ALA ALA A . n A 1 107 LYS 107 189 188 LYS LYS A . n A 1 108 ALA 108 190 189 ALA ALA A . n A 1 109 VAL 109 191 190 VAL VAL A . n A 1 110 ASN 110 192 191 ASN ASN A . n A 1 111 ASN 111 193 192 ASN ASN A . n A 1 112 ILE 112 194 193 ILE ILE A . n A 1 113 VAL 113 195 194 VAL VAL A . n A 1 114 THR 114 196 195 THR THR A . n A 1 115 VAL 115 197 196 VAL VAL A . n A 1 116 SER 116 198 197 SER SER A . n A 1 117 GLN 117 199 198 GLN GLN A . n A 1 118 GLY 118 200 199 GLY GLY A . n A 1 119 ASN 119 201 200 ASN ASN A . n A 1 120 ARG 120 202 201 ARG ARG A . n A 1 121 ILE 121 203 202 ILE ILE A . n A 1 122 ALA 122 204 203 ALA ALA A . n A 1 123 GLN 123 205 204 GLN GLN A . n A 1 124 LEU 124 206 205 LEU LEU A . n A 1 125 ILE 125 207 206 ILE ILE A . n A 1 126 LEU 126 208 207 LEU LEU A . n A 1 127 LEU 127 209 208 LEU LEU A . n A 1 128 PRO 128 210 209 PRO PRO A . n A 1 129 LEU 129 211 210 LEU LEU A . n A 1 130 ILE 130 212 211 ILE ILE A . n A 1 131 GLU 131 213 212 GLU GLU A . n A 1 132 THR 132 214 213 THR THR A . n A 1 133 ASP 133 215 214 ASP ASP A . n A 1 134 ASN 134 216 215 ASN ASN A . n A 1 135 LYS 135 217 216 LYS LYS A . n A 1 136 VAL 136 218 217 VAL VAL A . n A 1 137 GLN 137 219 218 GLN GLN A . n A 1 138 GLN 138 220 ? ? ? A . n A 1 139 PRO 139 221 ? ? ? A . n A 1 140 TYR 140 222 ? ? ? A . n A 1 141 ARG 141 223 ? ? ? A . n A 1 142 GLY 142 224 ? ? ? A . n A 1 143 GLN 143 225 ? ? ? A . n A 1 144 GLY 144 226 ? ? ? A . n A 1 145 SER 145 227 ? ? ? A . n A 1 146 PHE 146 228 ? ? ? A . n A 1 147 GLY 147 229 ? ? ? A . n A 1 148 SER 148 230 ? ? ? A . n A 1 149 SER 149 231 ? ? ? A . n A 1 150 ASP 150 232 ? ? ? A . n A 1 151 ILE 151 233 ? ? ? A . n A 1 152 TYR 152 234 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 235 1 HOH HOH A . B 2 HOH 2 236 2 HOH HOH A . B 2 HOH 3 237 3 HOH HOH A . B 2 HOH 4 238 4 HOH HOH A . B 2 HOH 5 239 5 HOH HOH A . B 2 HOH 6 240 6 HOH HOH A . B 2 HOH 7 241 7 HOH HOH A . B 2 HOH 8 242 8 HOH HOH A . B 2 HOH 9 243 9 HOH HOH A . B 2 HOH 10 244 10 HOH HOH A . B 2 HOH 11 245 11 HOH HOH A . B 2 HOH 12 246 12 HOH HOH A . B 2 HOH 13 247 13 HOH HOH A . B 2 HOH 14 248 14 HOH HOH A . B 2 HOH 15 249 15 HOH HOH A . B 2 HOH 16 250 16 HOH HOH A . B 2 HOH 17 251 17 HOH HOH A . B 2 HOH 18 252 18 HOH HOH A . B 2 HOH 19 253 19 HOH HOH A . B 2 HOH 20 254 20 HOH HOH A . B 2 HOH 21 255 21 HOH HOH A . B 2 HOH 22 256 22 HOH HOH A . B 2 HOH 23 257 23 HOH HOH A . B 2 HOH 24 258 24 HOH HOH A . B 2 HOH 25 259 25 HOH HOH A . B 2 HOH 26 260 26 HOH HOH A . B 2 HOH 27 261 27 HOH HOH A . B 2 HOH 28 262 28 HOH HOH A . B 2 HOH 29 263 29 HOH HOH A . B 2 HOH 30 264 30 HOH HOH A . B 2 HOH 31 265 31 HOH HOH A . B 2 HOH 32 266 32 HOH HOH A . B 2 HOH 33 267 33 HOH HOH A . B 2 HOH 34 268 34 HOH HOH A . B 2 HOH 35 269 35 HOH HOH A . B 2 HOH 36 270 36 HOH HOH A . B 2 HOH 37 271 37 HOH HOH A . B 2 HOH 38 272 38 HOH HOH A . B 2 HOH 39 273 39 HOH HOH A . B 2 HOH 40 274 40 HOH HOH A . B 2 HOH 41 275 41 HOH HOH A . B 2 HOH 42 276 42 HOH HOH A . B 2 HOH 43 277 43 HOH HOH A . B 2 HOH 44 278 44 HOH HOH A . B 2 HOH 45 279 45 HOH HOH A . B 2 HOH 46 280 46 HOH HOH A . B 2 HOH 47 281 47 HOH HOH A . B 2 HOH 48 282 49 HOH HOH A . B 2 HOH 49 283 50 HOH HOH A . B 2 HOH 50 284 51 HOH HOH A . B 2 HOH 51 285 52 HOH HOH A . B 2 HOH 52 286 53 HOH HOH A . B 2 HOH 53 287 54 HOH HOH A . B 2 HOH 54 288 56 HOH HOH A . B 2 HOH 55 289 57 HOH HOH A . B 2 HOH 56 290 58 HOH HOH A . B 2 HOH 57 291 59 HOH HOH A . B 2 HOH 58 292 60 HOH HOH A . B 2 HOH 59 293 61 HOH HOH A . B 2 HOH 60 294 62 HOH HOH A . B 2 HOH 61 295 64 HOH HOH A . B 2 HOH 62 296 65 HOH HOH A . B 2 HOH 63 297 66 HOH HOH A . B 2 HOH 64 298 67 HOH HOH A . B 2 HOH 65 299 68 HOH HOH A . B 2 HOH 66 300 69 HOH HOH A . B 2 HOH 67 301 70 HOH HOH A . B 2 HOH 68 302 71 HOH HOH A . B 2 HOH 69 303 73 HOH HOH A . B 2 HOH 70 304 74 HOH HOH A . B 2 HOH 71 305 75 HOH HOH A . B 2 HOH 72 306 76 HOH HOH A . B 2 HOH 73 307 77 HOH HOH A . B 2 HOH 74 308 80 HOH HOH A . B 2 HOH 75 309 81 HOH HOH A . B 2 HOH 76 310 83 HOH HOH A . B 2 HOH 77 311 84 HOH HOH A . B 2 HOH 78 312 85 HOH HOH A . B 2 HOH 79 313 86 HOH HOH A . B 2 HOH 80 314 90 HOH HOH A . B 2 HOH 81 315 91 HOH HOH A . B 2 HOH 82 316 92 HOH HOH A . B 2 HOH 83 317 95 HOH HOH A . B 2 HOH 84 318 96 HOH HOH A . B 2 HOH 85 319 98 HOH HOH A . B 2 HOH 86 320 99 HOH HOH A . B 2 HOH 87 321 101 HOH HOH A . B 2 HOH 88 322 102 HOH HOH A . B 2 HOH 89 323 103 HOH HOH A . B 2 HOH 90 324 104 HOH HOH A . B 2 HOH 91 325 106 HOH HOH A . B 2 HOH 92 326 107 HOH HOH A . B 2 HOH 93 327 109 HOH HOH A . B 2 HOH 94 328 110 HOH HOH A . B 2 HOH 95 329 113 HOH HOH A . B 2 HOH 96 330 114 HOH HOH A . B 2 HOH 97 331 115 HOH HOH A . B 2 HOH 98 332 116 HOH HOH A . B 2 HOH 99 333 118 HOH HOH A . B 2 HOH 100 334 120 HOH HOH A . B 2 HOH 101 335 121 HOH HOH A . B 2 HOH 102 336 122 HOH HOH A . B 2 HOH 103 337 124 HOH HOH A . B 2 HOH 104 338 125 HOH HOH A . B 2 HOH 105 339 126 HOH HOH A . B 2 HOH 106 340 127 HOH HOH A . B 2 HOH 107 341 130 HOH HOH A . B 2 HOH 108 342 131 HOH HOH A . B 2 HOH 109 343 132 HOH HOH A . B 2 HOH 110 344 133 HOH HOH A . B 2 HOH 111 345 134 HOH HOH A . B 2 HOH 112 346 135 HOH HOH A . B 2 HOH 113 347 138 HOH HOH A . B 2 HOH 114 348 139 HOH HOH A . B 2 HOH 115 349 140 HOH HOH A . B 2 HOH 116 350 143 HOH HOH A . B 2 HOH 117 351 145 HOH HOH A . B 2 HOH 118 352 146 HOH HOH A . B 2 HOH 119 353 147 HOH HOH A . B 2 HOH 120 354 149 HOH HOH A . B 2 HOH 121 355 151 HOH HOH A . B 2 HOH 122 356 152 HOH HOH A . B 2 HOH 123 357 153 HOH HOH A . B 2 HOH 124 358 154 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 106 ? CG ? A GLN 24 CG 2 1 Y 1 A GLN 106 ? CD ? A GLN 24 CD 3 1 Y 1 A GLN 106 ? OE1 ? A GLN 24 OE1 4 1 Y 1 A GLN 106 ? NE2 ? A GLN 24 NE2 5 1 Y 1 A LYS 112 ? NZ ? A LYS 30 NZ 6 1 Y 1 A ARG 161 ? NH1 ? A ARG 79 NH1 7 1 Y 1 A ARG 161 ? NH2 ? A ARG 79 NH2 8 1 Y 1 A GLN 199 ? OE1 ? A GLN 117 OE1 9 1 Y 1 A GLN 199 ? NE2 ? A GLN 117 NE2 10 1 Y 1 A ARG 202 ? CD ? A ARG 120 CD 11 1 Y 1 A ARG 202 ? NE ? A ARG 120 NE 12 1 Y 1 A ARG 202 ? CZ ? A ARG 120 CZ 13 1 Y 1 A ARG 202 ? NH1 ? A ARG 120 NH1 14 1 Y 1 A ARG 202 ? NH2 ? A ARG 120 NH2 15 1 Y 1 A LYS 217 ? CE ? A LYS 135 CE 16 1 Y 1 A LYS 217 ? NZ ? A LYS 135 NZ 17 1 Y 1 A GLN 219 ? CG ? A GLN 137 CG 18 1 Y 1 A GLN 219 ? CD ? A GLN 137 CD 19 1 Y 1 A GLN 219 ? OE1 ? A GLN 137 OE1 20 1 Y 1 A GLN 219 ? NE2 ? A GLN 137 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MAR345 'data collection' . ? 2 XDS 'data scaling' . ? 3 # _cell.entry_id 2D4L _cell.length_a 61.163 _cell.length_b 61.163 _cell.length_c 64.167 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2D4L _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2D4L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, AMMONIUM CHLORIDE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-01-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.843 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7B' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.843 # _reflns.entry_id 2D4L _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 53.0 _reflns.d_resolution_high 1.7 _reflns.number_obs 14813 _reflns.number_all 14813 _reflns.percent_possible_obs 98.34 _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_Rsym_value 0.031 _reflns.pdbx_netI_over_sigmaI 21.15 _reflns.B_iso_Wilson_estimate 33.811 _reflns.pdbx_redundancy 3.08 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.8 _reflns_shell.percent_possible_all 98 _reflns_shell.Rmerge_I_obs 0.533 _reflns_shell.pdbx_Rsym_value 0.44 _reflns_shell.meanI_over_sigI_obs 3.33 _reflns_shell.pdbx_redundancy 3.09 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2308 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2D4L _refine.ls_number_reflns_obs 14013 _refine.ls_number_reflns_all 14013 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 98.34 _refine.ls_R_factor_obs 0.1632 _refine.ls_R_factor_all 0.1632 _refine.ls_R_factor_R_work 0.1623 _refine.ls_R_factor_R_free 0.17888 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.4 _refine.ls_number_reflns_R_free 800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.976 _refine.correlation_coeff_Fo_to_Fc_free 0.970 _refine.B_iso_mean 31.803 _refine.aniso_B[1][1] 1.22 _refine.aniso_B[2][2] 1.22 _refine.aniso_B[3][3] -1.83 _refine.aniso_B[1][2] 0.61 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, rigid body refinement' _refine.pdbx_starting_model 2AKV _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model 'TLS and isotropic individual' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.088 _refine.pdbx_overall_ESU_R_Free 0.082 _refine.overall_SU_ML 0.070 _refine.overall_SU_B 4.977 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 828 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 952 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.022 ? 869 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.948 2.007 ? 1192 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 12.202 5.160 ? 125 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.506 27.083 ? 24 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.575 15.000 ? 152 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.046 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.141 0.200 ? 151 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 622 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.225 0.200 ? 366 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.320 0.200 ? 615 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.195 0.200 ? 101 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.193 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.144 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.338 2.000 ? 589 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 5.274 20.000 ? 955 'X-RAY DIFFRACTION' ? r_scbond_it 12.776 50.000 ? 298 'X-RAY DIFFRACTION' ? r_scangle_it 15.060 50.000 ? 232 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1016 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs 97.82 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_obs 1077 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2D4L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2D4L _struct.title 'Crystal structure of truncated in C-terminal M-PMV dUTPase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D4L _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'jelly roll, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VPRT_MPMV _struct_ref.pdbx_db_accession P07570 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 11 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D4L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P07570 _struct_ref_seq.db_align_beg 11 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 162 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 83 _struct_ref_seq.pdbx_auth_seq_align_end 234 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2D4L _struct_ref_seq_dif.mon_id LYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P07570 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 83 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 83 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6510 ? 1 MORE -58 ? 1 'SSA (A^2)' 14280 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_775 -y+2,x-y+2,z -0.5000000000 -0.8660254038 0.0000000000 61.1630000000 0.8660254038 -0.5000000000 0.0000000000 105.9374235433 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_575 -x+y,-x+2,z -0.5000000000 0.8660254038 0.0000000000 -61.1630000000 -0.8660254038 -0.5000000000 0.0000000000 105.9374235433 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;The biological assembly is a trimer generated from the monomer in the asymmetric unit by the operations: 2-y,2+x-y,z and -x+y,2-x,z ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 29 ? LEU A 31 ? SER A 111 LEU A 113 5 ? 3 HELX_P HELX_P2 2 THR A 52 ? GLY A 56 ? THR A 134 GLY A 138 5 ? 5 HELX_P HELX_P3 3 ARG A 79 ? LYS A 85 ? ARG A 161 LYS A 167 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 43 C ? ? ? 1_555 A CSO 44 N ? ? A LEU 125 A CSO 126 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale2 covale both ? A CSO 44 C ? ? ? 1_555 A SER 45 N ? ? A CSO 126 A SER 127 1_555 ? ? ? ? ? ? ? 1.346 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CSO _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 44 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id CSO _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 126 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id CYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id CSO _pdbx_modification_feature.type Hydroxylation _pdbx_modification_feature.category 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 24 A . ? GLN 106 A LYS 25 A ? LYS 107 A 1 -22.78 2 GLY 66 A . ? GLY 148 A PRO 67 A ? PRO 149 A 1 9.59 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 26 ? PRO A 27 ? GLN A 108 PRO A 109 A 2 GLN A 58 ? TYR A 65 ? GLN A 140 TYR A 147 A 3 GLU A 101 ? ALA A 108 ? GLU A 183 ALA A 190 A 4 LEU A 87 ? TYR A 90 ? LEU A 169 TYR A 172 B 1 LEU A 41 ? CSO A 44 ? LEU A 123 CSO A 126 B 2 ARG A 120 ? PRO A 128 ? ARG A 202 PRO A 210 B 3 THR A 72 ? GLY A 78 ? THR A 154 GLY A 160 B 4 GLY A 92 ? ILE A 94 ? GLY A 174 ILE A 176 C 1 THR A 49 ? LEU A 51 ? THR A 131 LEU A 133 C 2 VAL A 113 ? VAL A 115 ? VAL A 195 VAL A 197 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 26 ? N GLN A 108 O TYR A 65 ? O TYR A 147 A 2 3 N LEU A 60 ? N LEU A 142 O ILE A 104 ? O ILE A 186 A 3 4 O LYS A 107 ? O LYS A 189 N GLN A 88 ? N GLN A 170 B 1 2 N LEU A 41 ? N LEU A 123 O LEU A 124 ? O LEU A 206 B 2 3 O ILE A 125 ? O ILE A 207 N LEU A 75 ? N LEU A 157 B 3 4 N ILE A 76 ? N ILE A 158 O GLY A 92 ? O GLY A 174 C 1 2 N THR A 49 ? N THR A 131 O VAL A 115 ? O VAL A 197 # _pdbx_entry_details.entry_id 2D4L _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 44 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 126 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details S-HYDROXYCYSTEINE # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 241 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 2.6934 _pdbx_refine_tls.origin_y 59.2597 _pdbx_refine_tls.origin_z 30.4909 _pdbx_refine_tls.T[1][1] -0.0407 _pdbx_refine_tls.T[2][2] -0.0711 _pdbx_refine_tls.T[3][3] -0.0174 _pdbx_refine_tls.T[1][2] 0.0145 _pdbx_refine_tls.T[1][3] -0.0126 _pdbx_refine_tls.T[2][3] 0.0239 _pdbx_refine_tls.L[1][1] 0.9390 _pdbx_refine_tls.L[2][2] 1.2128 _pdbx_refine_tls.L[3][3] 2.0859 _pdbx_refine_tls.L[1][2] 0.1287 _pdbx_refine_tls.L[1][3] -0.5426 _pdbx_refine_tls.L[2][3] 0.2015 _pdbx_refine_tls.S[1][1] 0.0233 _pdbx_refine_tls.S[1][2] -0.0920 _pdbx_refine_tls.S[1][3] -0.1518 _pdbx_refine_tls.S[2][1] 0.0022 _pdbx_refine_tls.S[2][2] 0.0293 _pdbx_refine_tls.S[2][3] -0.0501 _pdbx_refine_tls.S[3][1] 0.1283 _pdbx_refine_tls.S[3][2] 0.1388 _pdbx_refine_tls.S[3][3] -0.0526 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 106 A 24 A 219 A 137 ? 'X-RAY DIFFRACTION' ? 2 1 A 235 B 1 A 358 B 124 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 83 ? A LYS 1 2 1 Y 1 A ARG 84 ? A ARG 2 3 1 Y 1 A VAL 85 ? A VAL 3 4 1 Y 1 A GLU 86 ? A GLU 4 5 1 Y 1 A GLY 87 ? A GLY 5 6 1 Y 1 A PRO 88 ? A PRO 6 7 1 Y 1 A ALA 89 ? A ALA 7 8 1 Y 1 A PRO 90 ? A PRO 8 9 1 Y 1 A GLY 91 ? A GLY 9 10 1 Y 1 A PRO 92 ? A PRO 10 11 1 Y 1 A GLU 93 ? A GLU 11 12 1 Y 1 A THR 94 ? A THR 12 13 1 Y 1 A SER 95 ? A SER 13 14 1 Y 1 A LEU 96 ? A LEU 14 15 1 Y 1 A TRP 97 ? A TRP 15 16 1 Y 1 A GLY 98 ? A GLY 16 17 1 Y 1 A SER 99 ? A SER 17 18 1 Y 1 A GLN 100 ? A GLN 18 19 1 Y 1 A LEU 101 ? A LEU 19 20 1 Y 1 A CYS 102 ? A CYS 20 21 1 Y 1 A SER 103 ? A SER 21 22 1 Y 1 A SER 104 ? A SER 22 23 1 Y 1 A GLN 105 ? A GLN 23 24 1 Y 1 A GLN 220 ? A GLN 138 25 1 Y 1 A PRO 221 ? A PRO 139 26 1 Y 1 A TYR 222 ? A TYR 140 27 1 Y 1 A ARG 223 ? A ARG 141 28 1 Y 1 A GLY 224 ? A GLY 142 29 1 Y 1 A GLN 225 ? A GLN 143 30 1 Y 1 A GLY 226 ? A GLY 144 31 1 Y 1 A SER 227 ? A SER 145 32 1 Y 1 A PHE 228 ? A PHE 146 33 1 Y 1 A GLY 229 ? A GLY 147 34 1 Y 1 A SER 230 ? A SER 148 35 1 Y 1 A SER 231 ? A SER 149 36 1 Y 1 A ASP 232 ? A ASP 150 37 1 Y 1 A ILE 233 ? A ILE 151 38 1 Y 1 A TYR 234 ? A TYR 152 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CSO N N N N 74 CSO CA C N R 75 CSO CB C N N 76 CSO SG S N N 77 CSO C C N N 78 CSO O O N N 79 CSO OXT O N N 80 CSO OD O N N 81 CSO H H N N 82 CSO H2 H N N 83 CSO HA H N N 84 CSO HB2 H N N 85 CSO HB3 H N N 86 CSO HXT H N N 87 CSO HD H N N 88 CYS N N N N 89 CYS CA C N R 90 CYS C C N N 91 CYS O O N N 92 CYS CB C N N 93 CYS SG S N N 94 CYS OXT O N N 95 CYS H H N N 96 CYS H2 H N N 97 CYS HA H N N 98 CYS HB2 H N N 99 CYS HB3 H N N 100 CYS HG H N N 101 CYS HXT H N N 102 GLN N N N N 103 GLN CA C N S 104 GLN C C N N 105 GLN O O N N 106 GLN CB C N N 107 GLN CG C N N 108 GLN CD C N N 109 GLN OE1 O N N 110 GLN NE2 N N N 111 GLN OXT O N N 112 GLN H H N N 113 GLN H2 H N N 114 GLN HA H N N 115 GLN HB2 H N N 116 GLN HB3 H N N 117 GLN HG2 H N N 118 GLN HG3 H N N 119 GLN HE21 H N N 120 GLN HE22 H N N 121 GLN HXT H N N 122 GLU N N N N 123 GLU CA C N S 124 GLU C C N N 125 GLU O O N N 126 GLU CB C N N 127 GLU CG C N N 128 GLU CD C N N 129 GLU OE1 O N N 130 GLU OE2 O N N 131 GLU OXT O N N 132 GLU H H N N 133 GLU H2 H N N 134 GLU HA H N N 135 GLU HB2 H N N 136 GLU HB3 H N N 137 GLU HG2 H N N 138 GLU HG3 H N N 139 GLU HE2 H N N 140 GLU HXT H N N 141 GLY N N N N 142 GLY CA C N N 143 GLY C C N N 144 GLY O O N N 145 GLY OXT O N N 146 GLY H H N N 147 GLY H2 H N N 148 GLY HA2 H N N 149 GLY HA3 H N N 150 GLY HXT H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 ILE N N N N 176 ILE CA C N S 177 ILE C C N N 178 ILE O O N N 179 ILE CB C N S 180 ILE CG1 C N N 181 ILE CG2 C N N 182 ILE CD1 C N N 183 ILE OXT O N N 184 ILE H H N N 185 ILE H2 H N N 186 ILE HA H N N 187 ILE HB H N N 188 ILE HG12 H N N 189 ILE HG13 H N N 190 ILE HG21 H N N 191 ILE HG22 H N N 192 ILE HG23 H N N 193 ILE HD11 H N N 194 ILE HD12 H N N 195 ILE HD13 H N N 196 ILE HXT H N N 197 LEU N N N N 198 LEU CA C N S 199 LEU C C N N 200 LEU O O N N 201 LEU CB C N N 202 LEU CG C N N 203 LEU CD1 C N N 204 LEU CD2 C N N 205 LEU OXT O N N 206 LEU H H N N 207 LEU H2 H N N 208 LEU HA H N N 209 LEU HB2 H N N 210 LEU HB3 H N N 211 LEU HG H N N 212 LEU HD11 H N N 213 LEU HD12 H N N 214 LEU HD13 H N N 215 LEU HD21 H N N 216 LEU HD22 H N N 217 LEU HD23 H N N 218 LEU HXT H N N 219 LYS N N N N 220 LYS CA C N S 221 LYS C C N N 222 LYS O O N N 223 LYS CB C N N 224 LYS CG C N N 225 LYS CD C N N 226 LYS CE C N N 227 LYS NZ N N N 228 LYS OXT O N N 229 LYS H H N N 230 LYS H2 H N N 231 LYS HA H N N 232 LYS HB2 H N N 233 LYS HB3 H N N 234 LYS HG2 H N N 235 LYS HG3 H N N 236 LYS HD2 H N N 237 LYS HD3 H N N 238 LYS HE2 H N N 239 LYS HE3 H N N 240 LYS HZ1 H N N 241 LYS HZ2 H N N 242 LYS HZ3 H N N 243 LYS HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CSO N CA sing N N 70 CSO N H sing N N 71 CSO N H2 sing N N 72 CSO CA CB sing N N 73 CSO CA C sing N N 74 CSO CA HA sing N N 75 CSO CB SG sing N N 76 CSO CB HB2 sing N N 77 CSO CB HB3 sing N N 78 CSO SG OD sing N N 79 CSO C O doub N N 80 CSO C OXT sing N N 81 CSO OXT HXT sing N N 82 CSO OD HD sing N N 83 CYS N CA sing N N 84 CYS N H sing N N 85 CYS N H2 sing N N 86 CYS CA C sing N N 87 CYS CA CB sing N N 88 CYS CA HA sing N N 89 CYS C O doub N N 90 CYS C OXT sing N N 91 CYS CB SG sing N N 92 CYS CB HB2 sing N N 93 CYS CB HB3 sing N N 94 CYS SG HG sing N N 95 CYS OXT HXT sing N N 96 GLN N CA sing N N 97 GLN N H sing N N 98 GLN N H2 sing N N 99 GLN CA C sing N N 100 GLN CA CB sing N N 101 GLN CA HA sing N N 102 GLN C O doub N N 103 GLN C OXT sing N N 104 GLN CB CG sing N N 105 GLN CB HB2 sing N N 106 GLN CB HB3 sing N N 107 GLN CG CD sing N N 108 GLN CG HG2 sing N N 109 GLN CG HG3 sing N N 110 GLN CD OE1 doub N N 111 GLN CD NE2 sing N N 112 GLN NE2 HE21 sing N N 113 GLN NE2 HE22 sing N N 114 GLN OXT HXT sing N N 115 GLU N CA sing N N 116 GLU N H sing N N 117 GLU N H2 sing N N 118 GLU CA C sing N N 119 GLU CA CB sing N N 120 GLU CA HA sing N N 121 GLU C O doub N N 122 GLU C OXT sing N N 123 GLU CB CG sing N N 124 GLU CB HB2 sing N N 125 GLU CB HB3 sing N N 126 GLU CG CD sing N N 127 GLU CG HG2 sing N N 128 GLU CG HG3 sing N N 129 GLU CD OE1 doub N N 130 GLU CD OE2 sing N N 131 GLU OE2 HE2 sing N N 132 GLU OXT HXT sing N N 133 GLY N CA sing N N 134 GLY N H sing N N 135 GLY N H2 sing N N 136 GLY CA C sing N N 137 GLY CA HA2 sing N N 138 GLY CA HA3 sing N N 139 GLY C O doub N N 140 GLY C OXT sing N N 141 GLY OXT HXT sing N N 142 HIS N CA sing N N 143 HIS N H sing N N 144 HIS N H2 sing N N 145 HIS CA C sing N N 146 HIS CA CB sing N N 147 HIS CA HA sing N N 148 HIS C O doub N N 149 HIS C OXT sing N N 150 HIS CB CG sing N N 151 HIS CB HB2 sing N N 152 HIS CB HB3 sing N N 153 HIS CG ND1 sing Y N 154 HIS CG CD2 doub Y N 155 HIS ND1 CE1 doub Y N 156 HIS ND1 HD1 sing N N 157 HIS CD2 NE2 sing Y N 158 HIS CD2 HD2 sing N N 159 HIS CE1 NE2 sing Y N 160 HIS CE1 HE1 sing N N 161 HIS NE2 HE2 sing N N 162 HIS OXT HXT sing N N 163 HOH O H1 sing N N 164 HOH O H2 sing N N 165 ILE N CA sing N N 166 ILE N H sing N N 167 ILE N H2 sing N N 168 ILE CA C sing N N 169 ILE CA CB sing N N 170 ILE CA HA sing N N 171 ILE C O doub N N 172 ILE C OXT sing N N 173 ILE CB CG1 sing N N 174 ILE CB CG2 sing N N 175 ILE CB HB sing N N 176 ILE CG1 CD1 sing N N 177 ILE CG1 HG12 sing N N 178 ILE CG1 HG13 sing N N 179 ILE CG2 HG21 sing N N 180 ILE CG2 HG22 sing N N 181 ILE CG2 HG23 sing N N 182 ILE CD1 HD11 sing N N 183 ILE CD1 HD12 sing N N 184 ILE CD1 HD13 sing N N 185 ILE OXT HXT sing N N 186 LEU N CA sing N N 187 LEU N H sing N N 188 LEU N H2 sing N N 189 LEU CA C sing N N 190 LEU CA CB sing N N 191 LEU CA HA sing N N 192 LEU C O doub N N 193 LEU C OXT sing N N 194 LEU CB CG sing N N 195 LEU CB HB2 sing N N 196 LEU CB HB3 sing N N 197 LEU CG CD1 sing N N 198 LEU CG CD2 sing N N 199 LEU CG HG sing N N 200 LEU CD1 HD11 sing N N 201 LEU CD1 HD12 sing N N 202 LEU CD1 HD13 sing N N 203 LEU CD2 HD21 sing N N 204 LEU CD2 HD22 sing N N 205 LEU CD2 HD23 sing N N 206 LEU OXT HXT sing N N 207 LYS N CA sing N N 208 LYS N H sing N N 209 LYS N H2 sing N N 210 LYS CA C sing N N 211 LYS CA CB sing N N 212 LYS CA HA sing N N 213 LYS C O doub N N 214 LYS C OXT sing N N 215 LYS CB CG sing N N 216 LYS CB HB2 sing N N 217 LYS CB HB3 sing N N 218 LYS CG CD sing N N 219 LYS CG HG2 sing N N 220 LYS CG HG3 sing N N 221 LYS CD CE sing N N 222 LYS CD HD2 sing N N 223 LYS CD HD3 sing N N 224 LYS CE NZ sing N N 225 LYS CE HE2 sing N N 226 LYS CE HE3 sing N N 227 LYS NZ HZ1 sing N N 228 LYS NZ HZ2 sing N N 229 LYS NZ HZ3 sing N N 230 LYS OXT HXT sing N N 231 MET N CA sing N N 232 MET N H sing N N 233 MET N H2 sing N N 234 MET CA C sing N N 235 MET CA CB sing N N 236 MET CA HA sing N N 237 MET C O doub N N 238 MET C OXT sing N N 239 MET CB CG sing N N 240 MET CB HB2 sing N N 241 MET CB HB3 sing N N 242 MET CG SD sing N N 243 MET CG HG2 sing N N 244 MET CG HG3 sing N N 245 MET SD CE sing N N 246 MET CE HE1 sing N N 247 MET CE HE2 sing N N 248 MET CE HE3 sing N N 249 MET OXT HXT sing N N 250 PHE N CA sing N N 251 PHE N H sing N N 252 PHE N H2 sing N N 253 PHE CA C sing N N 254 PHE CA CB sing N N 255 PHE CA HA sing N N 256 PHE C O doub N N 257 PHE C OXT sing N N 258 PHE CB CG sing N N 259 PHE CB HB2 sing N N 260 PHE CB HB3 sing N N 261 PHE CG CD1 doub Y N 262 PHE CG CD2 sing Y N 263 PHE CD1 CE1 sing Y N 264 PHE CD1 HD1 sing N N 265 PHE CD2 CE2 doub Y N 266 PHE CD2 HD2 sing N N 267 PHE CE1 CZ doub Y N 268 PHE CE1 HE1 sing N N 269 PHE CE2 CZ sing Y N 270 PHE CE2 HE2 sing N N 271 PHE CZ HZ sing N N 272 PHE OXT HXT sing N N 273 PRO N CA sing N N 274 PRO N CD sing N N 275 PRO N H sing N N 276 PRO CA C sing N N 277 PRO CA CB sing N N 278 PRO CA HA sing N N 279 PRO C O doub N N 280 PRO C OXT sing N N 281 PRO CB CG sing N N 282 PRO CB HB2 sing N N 283 PRO CB HB3 sing N N 284 PRO CG CD sing N N 285 PRO CG HG2 sing N N 286 PRO CG HG3 sing N N 287 PRO CD HD2 sing N N 288 PRO CD HD3 sing N N 289 PRO OXT HXT sing N N 290 SER N CA sing N N 291 SER N H sing N N 292 SER N H2 sing N N 293 SER CA C sing N N 294 SER CA CB sing N N 295 SER CA HA sing N N 296 SER C O doub N N 297 SER C OXT sing N N 298 SER CB OG sing N N 299 SER CB HB2 sing N N 300 SER CB HB3 sing N N 301 SER OG HG sing N N 302 SER OXT HXT sing N N 303 THR N CA sing N N 304 THR N H sing N N 305 THR N H2 sing N N 306 THR CA C sing N N 307 THR CA CB sing N N 308 THR CA HA sing N N 309 THR C O doub N N 310 THR C OXT sing N N 311 THR CB OG1 sing N N 312 THR CB CG2 sing N N 313 THR CB HB sing N N 314 THR OG1 HG1 sing N N 315 THR CG2 HG21 sing N N 316 THR CG2 HG22 sing N N 317 THR CG2 HG23 sing N N 318 THR OXT HXT sing N N 319 TRP N CA sing N N 320 TRP N H sing N N 321 TRP N H2 sing N N 322 TRP CA C sing N N 323 TRP CA CB sing N N 324 TRP CA HA sing N N 325 TRP C O doub N N 326 TRP C OXT sing N N 327 TRP CB CG sing N N 328 TRP CB HB2 sing N N 329 TRP CB HB3 sing N N 330 TRP CG CD1 doub Y N 331 TRP CG CD2 sing Y N 332 TRP CD1 NE1 sing Y N 333 TRP CD1 HD1 sing N N 334 TRP CD2 CE2 doub Y N 335 TRP CD2 CE3 sing Y N 336 TRP NE1 CE2 sing Y N 337 TRP NE1 HE1 sing N N 338 TRP CE2 CZ2 sing Y N 339 TRP CE3 CZ3 doub Y N 340 TRP CE3 HE3 sing N N 341 TRP CZ2 CH2 doub Y N 342 TRP CZ2 HZ2 sing N N 343 TRP CZ3 CH2 sing Y N 344 TRP CZ3 HZ3 sing N N 345 TRP CH2 HH2 sing N N 346 TRP OXT HXT sing N N 347 TYR N CA sing N N 348 TYR N H sing N N 349 TYR N H2 sing N N 350 TYR CA C sing N N 351 TYR CA CB sing N N 352 TYR CA HA sing N N 353 TYR C O doub N N 354 TYR C OXT sing N N 355 TYR CB CG sing N N 356 TYR CB HB2 sing N N 357 TYR CB HB3 sing N N 358 TYR CG CD1 doub Y N 359 TYR CG CD2 sing Y N 360 TYR CD1 CE1 sing Y N 361 TYR CD1 HD1 sing N N 362 TYR CD2 CE2 doub Y N 363 TYR CD2 HD2 sing N N 364 TYR CE1 CZ doub Y N 365 TYR CE1 HE1 sing N N 366 TYR CE2 CZ sing Y N 367 TYR CE2 HE2 sing N N 368 TYR CZ OH sing N N 369 TYR OH HH sing N N 370 TYR OXT HXT sing N N 371 VAL N CA sing N N 372 VAL N H sing N N 373 VAL N H2 sing N N 374 VAL CA C sing N N 375 VAL CA CB sing N N 376 VAL CA HA sing N N 377 VAL C O doub N N 378 VAL C OXT sing N N 379 VAL CB CG1 sing N N 380 VAL CB CG2 sing N N 381 VAL CB HB sing N N 382 VAL CG1 HG11 sing N N 383 VAL CG1 HG12 sing N N 384 VAL CG1 HG13 sing N N 385 VAL CG2 HG21 sing N N 386 VAL CG2 HG22 sing N N 387 VAL CG2 HG23 sing N N 388 VAL OXT HXT sing N N 389 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AKV _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 2D4L _atom_sites.fract_transf_matrix[1][1] 0.016350 _atom_sites.fract_transf_matrix[1][2] 0.009440 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018879 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015584 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_