data_2D7M # _entry.id 2D7M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D7M pdb_00002d7m 10.2210/pdb2d7m/pdb RCSB RCSB025087 ? ? WWPDB D_1000025087 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003000177.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D7M _pdbx_database_status.recvd_initial_deposition_date 2005-11-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the 14th Filamin domain from human Filamin C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Filamin-C _entity.formula_weight 11749.861 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Filamin domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Gamma-filamin, Filamin-2, Protein FLNc, Actin-binding-like protein, ABP-L, ABP-280-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSG RYTITIKYGGDEIPYSPFRIHALPTGDASSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSG RYTITIKYGGDEIPYSPFRIHALPTGDASSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003000177.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 HIS n 1 10 ASP n 1 11 ALA n 1 12 SER n 1 13 LYS n 1 14 VAL n 1 15 ARG n 1 16 ALA n 1 17 SER n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 LEU n 1 22 ASN n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 ILE n 1 27 PRO n 1 28 ALA n 1 29 SER n 1 30 LEU n 1 31 PRO n 1 32 VAL n 1 33 GLU n 1 34 PHE n 1 35 THR n 1 36 ILE n 1 37 ASP n 1 38 ALA n 1 39 ARG n 1 40 ASP n 1 41 ALA n 1 42 GLY n 1 43 GLU n 1 44 GLY n 1 45 LEU n 1 46 LEU n 1 47 THR n 1 48 VAL n 1 49 GLN n 1 50 ILE n 1 51 LEU n 1 52 ASP n 1 53 PRO n 1 54 GLU n 1 55 GLY n 1 56 LYS n 1 57 PRO n 1 58 LYS n 1 59 LYS n 1 60 ALA n 1 61 ASN n 1 62 ILE n 1 63 ARG n 1 64 ASP n 1 65 ASN n 1 66 GLY n 1 67 ASP n 1 68 GLY n 1 69 THR n 1 70 TYR n 1 71 THR n 1 72 VAL n 1 73 SER n 1 74 TYR n 1 75 LEU n 1 76 PRO n 1 77 ASP n 1 78 MET n 1 79 SER n 1 80 GLY n 1 81 ARG n 1 82 TYR n 1 83 THR n 1 84 ILE n 1 85 THR n 1 86 ILE n 1 87 LYS n 1 88 TYR n 1 89 GLY n 1 90 GLY n 1 91 ASP n 1 92 GLU n 1 93 ILE n 1 94 PRO n 1 95 TYR n 1 96 SER n 1 97 PRO n 1 98 PHE n 1 99 ARG n 1 100 ILE n 1 101 HIS n 1 102 ALA n 1 103 LEU n 1 104 PRO n 1 105 THR n 1 106 GLY n 1 107 ASP n 1 108 ALA n 1 109 SER n 1 110 SER n 1 111 GLY n 1 112 PRO n 1 113 SER n 1 114 SER n 1 115 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLNC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050404-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLNC_HUMAN _struct_ref.pdbx_db_accession Q14315 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILGPEGKPKKANIRDNGDGTYAVSYLPDMSGRYTITIK YGGDEIPYSPFRIHALPTGDAS ; _struct_ref.pdbx_align_begin 1536 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D7M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 109 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14315 _struct_ref_seq.db_align_beg 1536 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1637 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 109 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D7M GLY A 1 ? UNP Q14315 ? ? 'cloning artifact' 1 1 1 2D7M SER A 2 ? UNP Q14315 ? ? 'cloning artifact' 2 2 1 2D7M SER A 3 ? UNP Q14315 ? ? 'cloning artifact' 3 3 1 2D7M GLY A 4 ? UNP Q14315 ? ? 'cloning artifact' 4 4 1 2D7M SER A 5 ? UNP Q14315 ? ? 'cloning artifact' 5 5 1 2D7M SER A 6 ? UNP Q14315 ? ? 'cloning artifact' 6 6 1 2D7M GLY A 7 ? UNP Q14315 ? ? 'cloning artifact' 7 7 1 2D7M ASP A 52 ? UNP Q14315 GLY 1580 'SEE REMARK 999' 52 8 1 2D7M THR A 71 ? UNP Q14315 ALA 1599 'SEE REMARK 999' 71 9 1 2D7M SER A 110 ? UNP Q14315 ? ? 'cloning artifact' 110 10 1 2D7M GLY A 111 ? UNP Q14315 ? ? 'cloning artifact' 111 11 1 2D7M PRO A 112 ? UNP Q14315 ? ? 'cloning artifact' 112 12 1 2D7M SER A 113 ? UNP Q14315 ? ? 'cloning artifact' 113 13 1 2D7M SER A 114 ? UNP Q14315 ? ? 'cloning artifact' 114 14 1 2D7M GLY A 115 ? UNP Q14315 ? ? 'cloning artifact' 115 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.22mM Filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D7M _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D7M _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D7M _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D7M _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D7M _struct.title 'Solution structure of the 14th Filamin domain from human Filamin C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D7M _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 10 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id SER _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 12 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 10 _struct_conf.end_auth_comp_id SER _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 12 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 1 0.01 2 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 2 -0.02 3 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 3 0.00 4 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 4 -0.05 5 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 5 -0.07 6 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 6 0.02 7 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 7 -0.04 8 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 8 0.00 9 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 9 -0.05 10 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 10 -0.04 11 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 11 0.05 12 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 12 -0.06 13 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 13 -0.01 14 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 14 0.01 15 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 15 -0.04 16 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 16 -0.07 17 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 17 0.01 18 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 18 -0.01 19 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 19 0.02 20 SER 96 A . ? SER 96 A PRO 97 A ? PRO 97 A 20 -0.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 14 ? SER A 17 ? VAL A 14 SER A 17 A 2 VAL A 32 ? ALA A 38 ? VAL A 32 ALA A 38 A 3 TYR A 70 ? TYR A 74 ? TYR A 70 TYR A 74 A 4 ALA A 60 ? ASP A 64 ? ALA A 60 ASP A 64 B 1 ILE A 26 ? PRO A 27 ? ILE A 26 PRO A 27 B 2 PHE A 98 ? LEU A 103 ? PHE A 98 LEU A 103 B 3 GLY A 80 ? TYR A 88 ? GLY A 80 TYR A 88 B 4 LEU A 46 ? LEU A 51 ? LEU A 46 LEU A 51 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 17 ? N SER A 17 O THR A 35 ? O THR A 35 A 2 3 N VAL A 32 ? N VAL A 32 O TYR A 74 ? O TYR A 74 A 3 4 O THR A 71 ? O THR A 71 N ARG A 63 ? N ARG A 63 B 1 2 N ILE A 26 ? N ILE A 26 O HIS A 101 ? O HIS A 101 B 2 3 O ILE A 100 ? O ILE A 100 N TYR A 82 ? N TYR A 82 B 3 4 O THR A 85 ? O THR A 85 N GLN A 49 ? N GLN A 49 # _database_PDB_matrix.entry_id 2D7M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D7M _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 MET 78 78 78 MET MET A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 GLY 115 115 115 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 43 ? ? -94.36 54.69 2 1 ASP A 52 ? ? -40.84 162.90 3 1 PRO A 53 ? ? -69.82 6.81 4 1 PRO A 76 ? ? -69.80 81.08 5 1 PRO A 94 ? ? -69.77 3.15 6 1 THR A 105 ? ? -97.13 34.31 7 2 ASP A 52 ? ? -40.64 162.88 8 2 PRO A 53 ? ? -69.78 6.73 9 2 PRO A 76 ? ? -69.73 83.85 10 2 PRO A 94 ? ? -69.74 3.13 11 2 THR A 105 ? ? -39.35 -26.41 12 2 ASP A 107 ? ? -50.50 176.62 13 3 SER A 3 ? ? -48.17 168.46 14 3 ALA A 8 ? ? -100.98 41.69 15 3 GLU A 43 ? ? -96.75 54.52 16 3 ASP A 52 ? ? -40.83 162.86 17 3 PRO A 53 ? ? -69.76 6.87 18 3 PRO A 76 ? ? -69.79 81.54 19 3 PRO A 94 ? ? -69.70 3.21 20 3 PRO A 104 ? ? -69.74 97.89 21 3 ALA A 108 ? ? -55.76 98.57 22 3 SER A 109 ? ? -134.72 -53.16 23 3 SER A 114 ? ? -132.82 -59.07 24 4 SER A 6 ? ? -40.91 109.42 25 4 GLU A 43 ? ? -95.60 54.80 26 4 ASP A 52 ? ? -40.86 163.11 27 4 PRO A 53 ? ? -69.80 7.02 28 4 PRO A 76 ? ? -69.80 80.82 29 4 PRO A 94 ? ? -69.81 1.56 30 4 ASP A 107 ? ? -130.03 -52.32 31 5 ASP A 40 ? ? -98.51 31.47 32 5 ASP A 52 ? ? -43.18 162.88 33 5 PRO A 53 ? ? -69.78 7.11 34 5 PRO A 76 ? ? -69.75 84.31 35 5 PRO A 94 ? ? -69.81 3.27 36 5 PRO A 104 ? ? -69.71 97.13 37 6 ALA A 28 ? ? -56.90 170.18 38 6 ASP A 40 ? ? -97.59 33.76 39 6 GLU A 43 ? ? -97.68 54.61 40 6 ASP A 52 ? ? -42.95 162.83 41 6 PRO A 53 ? ? -69.79 6.77 42 6 PRO A 76 ? ? -69.74 87.17 43 6 PRO A 94 ? ? -69.82 2.01 44 6 ALA A 108 ? ? -90.32 42.72 45 6 SER A 113 ? ? -173.11 110.51 46 7 GLU A 43 ? ? -100.80 55.31 47 7 ASP A 52 ? ? -41.33 163.34 48 7 PRO A 53 ? ? -69.74 6.82 49 7 PRO A 76 ? ? -69.81 88.38 50 7 PRO A 94 ? ? -69.81 3.20 51 7 SER A 114 ? ? 72.01 34.32 52 8 GLU A 43 ? ? -110.41 54.43 53 8 ASP A 52 ? ? -44.38 162.72 54 8 PRO A 53 ? ? -69.78 6.80 55 8 PRO A 76 ? ? -69.75 80.88 56 8 PRO A 94 ? ? -69.80 3.13 57 9 ALA A 8 ? ? -106.50 42.48 58 9 ASP A 52 ? ? -44.40 162.96 59 9 PRO A 53 ? ? -69.74 6.92 60 9 PRO A 76 ? ? -69.79 85.63 61 9 PRO A 94 ? ? -69.73 3.35 62 9 THR A 105 ? ? -66.72 89.82 63 9 ALA A 108 ? ? -50.57 106.21 64 9 SER A 113 ? ? -130.13 -44.68 65 9 SER A 114 ? ? -132.81 -60.32 66 10 ALA A 8 ? ? -110.78 75.61 67 10 ASP A 40 ? ? -98.63 30.14 68 10 ASP A 52 ? ? -44.19 162.91 69 10 PRO A 53 ? ? -69.87 6.87 70 10 PRO A 76 ? ? -69.80 92.95 71 10 PRO A 94 ? ? -69.78 2.72 72 10 PRO A 112 ? ? -69.76 93.22 73 11 GLU A 43 ? ? -100.99 72.48 74 11 ASP A 52 ? ? -41.20 163.95 75 11 PRO A 53 ? ? -69.70 8.14 76 11 PRO A 76 ? ? -69.72 81.68 77 11 PRO A 94 ? ? -69.74 3.35 78 11 PRO A 104 ? ? -69.75 97.41 79 12 SER A 29 ? ? 49.84 26.94 80 12 ASP A 52 ? ? -40.81 162.91 81 12 PRO A 53 ? ? -69.78 6.83 82 12 PRO A 76 ? ? -69.84 81.50 83 12 PRO A 94 ? ? -69.81 3.00 84 13 SER A 17 ? ? -172.16 116.69 85 13 ASP A 52 ? ? -42.67 162.69 86 13 PRO A 53 ? ? -69.83 6.75 87 13 PRO A 76 ? ? -69.76 84.32 88 13 PRO A 94 ? ? -69.74 3.28 89 13 ASP A 107 ? ? -53.94 91.81 90 13 SER A 110 ? ? -65.06 74.05 91 14 ASP A 40 ? ? -99.28 34.77 92 14 ASP A 52 ? ? -43.32 162.88 93 14 PRO A 53 ? ? -69.70 6.76 94 14 PRO A 76 ? ? -69.74 79.72 95 14 PRO A 94 ? ? -69.80 3.38 96 14 SER A 110 ? ? -171.77 127.06 97 15 GLU A 43 ? ? -101.83 54.02 98 15 ASP A 52 ? ? -44.03 162.77 99 15 PRO A 53 ? ? -69.73 6.73 100 15 PRO A 76 ? ? -69.76 82.07 101 15 PRO A 94 ? ? -69.81 3.61 102 15 SER A 109 ? ? -44.80 158.75 103 16 GLU A 43 ? ? -95.87 54.15 104 16 ASP A 52 ? ? -46.71 163.08 105 16 PRO A 53 ? ? -69.73 7.17 106 16 PRO A 76 ? ? -69.82 82.18 107 16 PRO A 94 ? ? -69.81 1.86 108 16 ASP A 107 ? ? -130.31 -44.96 109 16 SER A 110 ? ? -174.93 105.82 110 16 PRO A 112 ? ? -69.72 2.46 111 16 SER A 113 ? ? -34.56 117.24 112 16 SER A 114 ? ? -40.49 109.19 113 17 SER A 5 ? ? -173.97 122.49 114 17 ASP A 40 ? ? -98.51 34.48 115 17 GLU A 43 ? ? -94.80 56.18 116 17 ASP A 52 ? ? -41.07 162.62 117 17 PRO A 53 ? ? -69.71 6.73 118 17 ASP A 67 ? ? -85.09 30.61 119 17 PRO A 76 ? ? -69.81 84.25 120 17 PRO A 94 ? ? -69.77 3.54 121 17 PRO A 104 ? ? -69.77 98.84 122 18 GLU A 43 ? ? -112.07 72.04 123 18 ASP A 52 ? ? -41.67 163.34 124 18 PRO A 53 ? ? -69.76 7.41 125 18 ASP A 67 ? ? -85.84 30.83 126 18 PRO A 76 ? ? -69.81 82.90 127 18 PRO A 94 ? ? -69.75 3.31 128 18 ALA A 108 ? ? -69.83 90.13 129 18 SER A 113 ? ? -46.82 157.30 130 19 LEU A 21 ? ? -97.16 30.36 131 19 ALA A 28 ? ? -58.50 176.37 132 19 GLU A 43 ? ? -102.27 72.75 133 19 ASP A 52 ? ? -44.62 162.51 134 19 PRO A 53 ? ? -69.71 6.34 135 19 PRO A 76 ? ? -69.76 80.96 136 19 PRO A 94 ? ? -69.74 2.19 137 19 PRO A 104 ? ? -69.74 97.85 138 19 ASP A 107 ? ? 34.54 42.71 139 20 SER A 3 ? ? -47.46 154.15 140 20 GLU A 43 ? ? -96.60 54.68 141 20 ASP A 52 ? ? -43.70 163.06 142 20 PRO A 53 ? ? -69.78 7.21 143 20 PRO A 76 ? ? -69.80 79.76 144 20 PRO A 94 ? ? -69.75 2.50 145 20 PRO A 104 ? ? -69.68 98.07 146 20 SER A 110 ? ? -174.50 143.55 147 20 PRO A 112 ? ? -69.72 3.28 148 20 SER A 113 ? ? -33.96 124.95 #