data_2D7O # _entry.id 2D7O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D7O pdb_00002d7o 10.2210/pdb2d7o/pdb RCSB RCSB025089 ? ? WWPDB D_1000025089 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003000177.4 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D7O _pdbx_database_status.recvd_initial_deposition_date 2005-11-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the 17th Filamin domain from human Filamin C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Filamin-C _entity.formula_weight 11259.434 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Filamin domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Gamma-filamin, Filamin-2, Protein FLNc, Actin-binding-like protein, ABP-L, ABP-280-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSI IVRFDDKHIPGSPFTAKITGDDSMRSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSI IVRFDDKHIPGSPFTAKITGDDSMRSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003000177.4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 ILE n 1 10 ASN n 1 11 SER n 1 12 ARG n 1 13 HIS n 1 14 VAL n 1 15 SER n 1 16 ALA n 1 17 TYR n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 LEU n 1 22 SER n 1 23 HIS n 1 24 GLY n 1 25 MET n 1 26 VAL n 1 27 ASN n 1 28 LYS n 1 29 PRO n 1 30 ALA n 1 31 THR n 1 32 PHE n 1 33 THR n 1 34 ILE n 1 35 VAL n 1 36 THR n 1 37 LYS n 1 38 ASP n 1 39 ALA n 1 40 GLY n 1 41 GLU n 1 42 GLY n 1 43 GLY n 1 44 LEU n 1 45 SER n 1 46 LEU n 1 47 ALA n 1 48 VAL n 1 49 GLU n 1 50 GLY n 1 51 PRO n 1 52 SER n 1 53 LYS n 1 54 ALA n 1 55 GLU n 1 56 ILE n 1 57 THR n 1 58 CYS n 1 59 LYS n 1 60 ASP n 1 61 ASN n 1 62 LYS n 1 63 ASP n 1 64 GLY n 1 65 THR n 1 66 CYS n 1 67 THR n 1 68 VAL n 1 69 SER n 1 70 TYR n 1 71 LEU n 1 72 PRO n 1 73 THR n 1 74 ALA n 1 75 PRO n 1 76 GLY n 1 77 ASP n 1 78 TYR n 1 79 SER n 1 80 ILE n 1 81 ILE n 1 82 VAL n 1 83 ARG n 1 84 PHE n 1 85 ASP n 1 86 ASP n 1 87 LYS n 1 88 HIS n 1 89 ILE n 1 90 PRO n 1 91 GLY n 1 92 SER n 1 93 PRO n 1 94 PHE n 1 95 THR n 1 96 ALA n 1 97 LYS n 1 98 ILE n 1 99 THR n 1 100 GLY n 1 101 ASP n 1 102 ASP n 1 103 SER n 1 104 MET n 1 105 ARG n 1 106 SER n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 SER n 1 111 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLNC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050404-10 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLNC_HUMAN _struct_ref.pdbx_db_accession Q14315 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDK HIPGSPFTAKITGDDSMR ; _struct_ref.pdbx_align_begin 1856 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D7O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14315 _struct_ref_seq.db_align_beg 1856 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1953 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 105 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D7O GLY A 1 ? UNP Q14315 ? ? 'cloning artifact' 1 1 1 2D7O SER A 2 ? UNP Q14315 ? ? 'cloning artifact' 2 2 1 2D7O SER A 3 ? UNP Q14315 ? ? 'cloning artifact' 3 3 1 2D7O GLY A 4 ? UNP Q14315 ? ? 'cloning artifact' 4 4 1 2D7O SER A 5 ? UNP Q14315 ? ? 'cloning artifact' 5 5 1 2D7O SER A 6 ? UNP Q14315 ? ? 'cloning artifact' 6 6 1 2D7O GLY A 7 ? UNP Q14315 ? ? 'cloning artifact' 7 7 1 2D7O SER A 106 ? UNP Q14315 ? ? 'cloning artifact' 106 8 1 2D7O GLY A 107 ? UNP Q14315 ? ? 'cloning artifact' 107 9 1 2D7O PRO A 108 ? UNP Q14315 ? ? 'cloning artifact' 108 10 1 2D7O SER A 109 ? UNP Q14315 ? ? 'cloning artifact' 109 11 1 2D7O SER A 110 ? UNP Q14315 ? ? 'cloning artifact' 110 12 1 2D7O GLY A 111 ? UNP Q14315 ? ? 'cloning artifact' 111 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.16mM Filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D7O _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D7O _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D7O _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D7O _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D7O _struct.title 'Solution structure of the 17th Filamin domain from human Filamin C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D7O _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLY _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 18 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id SER _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 22 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLY _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 18 _struct_conf.end_auth_comp_id SER _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 22 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 1 -0.05 2 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 2 -0.06 3 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 3 0.02 4 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 4 0.01 5 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 5 -0.05 6 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 6 -0.01 7 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 7 -0.04 8 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 8 0.02 9 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 9 -0.01 10 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 10 -0.04 11 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 11 -0.06 12 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 12 -0.01 13 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 13 0.05 14 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 14 -0.09 15 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 15 -0.01 16 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 16 -0.05 17 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 17 -0.02 18 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 18 0.05 19 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 19 -0.05 20 SER 92 A . ? SER 92 A PRO 93 A ? PRO 93 A 20 -0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 15 ? TYR A 17 ? SER A 15 TYR A 17 A 2 ALA A 30 ? VAL A 35 ? ALA A 30 VAL A 35 A 3 THR A 65 ? TYR A 70 ? THR A 65 TYR A 70 B 1 HIS A 23 ? MET A 25 ? HIS A 23 MET A 25 B 2 PHE A 94 ? THR A 99 ? PHE A 94 THR A 99 B 3 GLY A 76 ? ILE A 81 ? GLY A 76 ILE A 81 B 4 ALA A 47 ? GLU A 49 ? ALA A 47 GLU A 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 15 ? N SER A 15 O VAL A 35 ? O VAL A 35 A 2 3 N ALA A 30 ? N ALA A 30 O TYR A 70 ? O TYR A 70 B 1 2 N GLY A 24 ? N GLY A 24 O LYS A 97 ? O LYS A 97 B 2 3 O ALA A 96 ? O ALA A 96 N TYR A 78 ? N TYR A 78 B 3 4 O SER A 79 ? O SER A 79 N GLU A 49 ? N GLU A 49 # _database_PDB_matrix.entry_id 2D7O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D7O _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 MET 25 25 25 MET MET A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 MET 104 104 104 MET MET A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLY 111 111 111 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 3 ? ? 39.32 41.96 2 1 ALA A 8 ? ? -48.50 171.05 3 1 HIS A 23 ? ? -173.37 -176.35 4 1 GLU A 41 ? ? -36.79 112.90 5 1 PRO A 51 ? ? -69.74 2.54 6 1 SER A 52 ? ? -172.50 143.61 7 1 LYS A 62 ? ? 36.71 29.49 8 1 PRO A 90 ? ? -69.78 82.87 9 1 SER A 109 ? ? -121.77 -60.38 10 2 SER A 2 ? ? -69.62 94.99 11 2 HIS A 13 ? ? -172.64 148.74 12 2 HIS A 23 ? ? -174.96 -176.67 13 2 PRO A 29 ? ? -69.73 93.25 14 2 ALA A 30 ? ? -67.46 97.55 15 2 VAL A 35 ? ? -67.98 99.62 16 2 GLU A 41 ? ? -35.69 120.83 17 2 ASP A 86 ? ? 72.72 33.35 18 2 PRO A 90 ? ? -69.81 83.35 19 2 ASP A 101 ? ? -172.90 134.87 20 2 MET A 104 ? ? 34.89 43.18 21 2 SER A 106 ? ? -171.18 117.08 22 3 VAL A 35 ? ? -68.65 92.37 23 3 PRO A 51 ? ? -69.82 0.96 24 3 SER A 52 ? ? -173.76 145.85 25 3 ASP A 63 ? ? -133.04 -44.92 26 3 ASP A 86 ? ? 72.93 41.71 27 3 PRO A 90 ? ? -69.82 82.18 28 3 ASP A 102 ? ? -39.06 140.44 29 3 SER A 109 ? ? 71.33 39.87 30 4 ALA A 8 ? ? -169.35 110.76 31 4 HIS A 23 ? ? -170.28 -176.79 32 4 GLU A 41 ? ? -37.09 118.29 33 4 LYS A 62 ? ? 46.44 28.82 34 4 ASP A 86 ? ? 70.64 40.00 35 4 PRO A 90 ? ? -69.72 81.46 36 5 SER A 11 ? ? -174.48 110.60 37 5 VAL A 35 ? ? -68.03 97.50 38 5 GLU A 41 ? ? -39.88 125.79 39 5 PRO A 90 ? ? -69.72 85.04 40 6 SER A 5 ? ? -47.48 105.85 41 6 HIS A 23 ? ? -171.98 -179.45 42 6 PRO A 29 ? ? -69.78 98.47 43 6 VAL A 35 ? ? -68.02 97.82 44 6 ASP A 86 ? ? 70.48 39.90 45 6 PRO A 90 ? ? -69.81 83.99 46 6 ASP A 102 ? ? -101.32 43.73 47 6 SER A 106 ? ? -91.13 -61.86 48 7 ASN A 10 ? ? -37.40 96.98 49 7 SER A 11 ? ? -160.07 105.05 50 7 HIS A 13 ? ? -174.90 143.77 51 7 PRO A 29 ? ? -69.77 97.78 52 7 PRO A 51 ? ? -69.73 3.01 53 7 SER A 52 ? ? -174.98 141.62 54 7 LYS A 62 ? ? 33.56 35.10 55 7 PRO A 90 ? ? -69.74 82.11 56 8 HIS A 13 ? ? -172.87 146.06 57 8 ASP A 86 ? ? 71.79 40.46 58 8 PRO A 90 ? ? -69.79 82.38 59 8 ASP A 102 ? ? -107.42 79.74 60 8 SER A 110 ? ? -170.31 135.16 61 9 ASN A 10 ? ? -39.52 149.70 62 9 ARG A 12 ? ? -173.44 114.65 63 9 HIS A 23 ? ? -174.76 -177.36 64 9 ASP A 86 ? ? 71.03 32.60 65 9 PRO A 90 ? ? -69.75 83.52 66 9 PRO A 108 ? ? -69.74 -177.14 67 10 SER A 5 ? ? -47.24 107.06 68 10 SER A 6 ? ? -57.58 109.30 69 10 HIS A 23 ? ? -173.60 -176.29 70 10 PRO A 29 ? ? -69.82 97.58 71 10 VAL A 35 ? ? -68.10 95.90 72 10 PRO A 51 ? ? -69.74 0.90 73 10 SER A 52 ? ? -174.82 143.90 74 10 PRO A 90 ? ? -69.71 82.41 75 11 GLU A 41 ? ? -40.10 106.31 76 11 PRO A 90 ? ? -69.81 82.52 77 11 SER A 103 ? ? -173.17 125.62 78 11 PRO A 108 ? ? -69.75 87.21 79 12 PRO A 29 ? ? -69.82 96.88 80 12 ALA A 30 ? ? -64.78 99.65 81 12 PRO A 51 ? ? -69.72 2.86 82 12 SER A 52 ? ? -171.47 141.60 83 12 ASP A 86 ? ? 73.75 41.04 84 12 PRO A 90 ? ? -69.81 81.91 85 12 MET A 104 ? ? 34.01 37.77 86 12 PRO A 108 ? ? -69.73 86.71 87 13 ILE A 9 ? ? -87.31 46.33 88 13 SER A 11 ? ? -44.91 151.15 89 13 VAL A 35 ? ? -67.97 97.98 90 13 SER A 52 ? ? -172.91 140.07 91 13 PRO A 90 ? ? -69.71 82.54 92 13 THR A 95 ? ? -66.62 99.75 93 13 SER A 106 ? ? -127.56 -67.36 94 14 ILE A 9 ? ? -66.02 84.90 95 14 PRO A 29 ? ? -69.77 99.02 96 14 VAL A 35 ? ? -68.27 98.83 97 14 GLU A 41 ? ? -34.38 132.11 98 14 SER A 52 ? ? -173.77 143.98 99 14 PRO A 90 ? ? -69.79 82.56 100 15 PRO A 29 ? ? -69.72 96.83 101 15 SER A 52 ? ? -174.40 137.72 102 15 ASP A 63 ? ? -130.52 -30.24 103 15 PRO A 90 ? ? -69.82 85.85 104 16 SER A 2 ? ? 34.43 42.22 105 16 SER A 11 ? ? -170.30 117.88 106 16 PRO A 90 ? ? -69.79 89.50 107 16 THR A 95 ? ? -68.61 99.81 108 17 ILE A 9 ? ? -37.05 133.50 109 17 PRO A 29 ? ? -69.75 99.87 110 17 VAL A 35 ? ? -68.09 97.43 111 17 GLU A 41 ? ? -34.35 129.88 112 17 PRO A 51 ? ? -69.71 3.49 113 17 ASP A 63 ? ? -131.09 -32.03 114 17 PRO A 90 ? ? -69.80 81.09 115 17 SER A 110 ? ? 34.80 42.72 116 18 SER A 5 ? ? -107.54 42.18 117 18 ILE A 9 ? ? -97.66 41.87 118 18 VAL A 35 ? ? -68.05 96.54 119 18 GLU A 41 ? ? -38.13 110.72 120 18 PRO A 90 ? ? -69.76 87.77 121 18 THR A 95 ? ? -68.32 99.53 122 19 ASN A 10 ? ? -173.23 120.53 123 19 ARG A 12 ? ? -174.59 145.20 124 19 HIS A 13 ? ? -173.98 146.25 125 19 VAL A 35 ? ? -68.02 96.65 126 19 ALA A 39 ? ? -36.69 -39.01 127 19 GLU A 41 ? ? -34.68 126.08 128 19 SER A 52 ? ? -172.66 144.15 129 19 ASP A 85 ? ? 72.00 45.99 130 19 PRO A 90 ? ? -69.76 87.58 131 19 ASP A 102 ? ? -81.84 43.29 132 19 SER A 103 ? ? 39.40 42.60 133 19 MET A 104 ? ? -35.75 153.21 134 20 SER A 2 ? ? -42.81 105.48 135 20 ALA A 8 ? ? -35.61 152.08 136 20 SER A 11 ? ? -130.22 -63.79 137 20 HIS A 13 ? ? -170.31 147.14 138 20 ASP A 86 ? ? 72.82 35.76 139 20 PRO A 90 ? ? -69.79 81.56 140 20 SER A 103 ? ? -100.90 40.11 141 20 ARG A 105 ? ? 34.45 41.16 142 20 SER A 106 ? ? -35.32 125.03 #