data_2D80 # _entry.id 2D80 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2D80 RCSB RCSB025101 WWPDB D_1000025101 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2D81 _pdbx_database_related.details 'A S39A mutant protein complexed with R3HB trimer' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D80 _pdbx_database_status.recvd_initial_deposition_date 2005-11-30 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hisano, T.' 1 'Kasuya, K.' 2 'Saito, T.' 3 'Iwata, T.' 4 'Miki, K.' 5 # _citation.id primary _citation.title ;The Crystal Structure of Polyhydroxybutyrate Depolymerase from Penicillium funiculosum Provides Insights into the Recognition and Degradation of Biopolyesters ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 356 _citation.page_first 993 _citation.page_last 1004 _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16405909 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.12.028 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hisano, T.' 1 ? primary 'Kasuya, K.' 2 ? primary 'Tezuka, Y.' 3 ? primary 'Ishii, N.' 4 ? primary 'Kobayashi, T.' 5 ? primary 'Shiraki, M.' 6 ? primary 'Oroudjev, E.' 7 ? primary 'Hansma, H.' 8 ? primary 'Iwata, T.' 9 ? primary 'Doi, Y.' 10 ? primary 'Saito, T.' 11 ? primary 'Miki, K.' 12 ? # _cell.entry_id 2D80 _cell.length_a 49.507 _cell.length_b 68.876 _cell.length_c 38.733 _cell.angle_alpha 90.00 _cell.angle_beta 107.86 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2D80 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PHB depolymerase' 33525.969 1 3.1.1.75 ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 3 water nat water 18.015 240 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TALPAFNVNPNSVSVSGLSSGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGN QIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNC NYDGAGAALKWIYGSLNARNTGTLSGSVLSFAQSGSYGANGMDTTGYLYVPQSCASGATVCSLHVALHGCLQSYSSIGSR FIQNTGYNKWADTNNMIILYPQAIPDYTIHAIWNGGVLSNPNGCWDWVGWYGSNADQIGGVQMAAIVGQVKQIVSGFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;TALPAFNVNPNSVSVSGLSSGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGN QIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNC NYDGAGAALKWIYGSLNARNTGTLSGSVLSFAQSGSYGANGMDTTGYLYVPQSCASGATVCSLHVALHGCLQSYSSIGSR FIQNTGYNKWADTNNMIILYPQAIPDYTIHAIWNGGVLSNPNGCWDWVGWYGSNADQIGGVQMAAIVGQVKQIVSGFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ALA n 1 3 LEU n 1 4 PRO n 1 5 ALA n 1 6 PHE n 1 7 ASN n 1 8 VAL n 1 9 ASN n 1 10 PRO n 1 11 ASN n 1 12 SER n 1 13 VAL n 1 14 SER n 1 15 VAL n 1 16 SER n 1 17 GLY n 1 18 LEU n 1 19 SER n 1 20 SER n 1 21 GLY n 1 22 GLY n 1 23 TYR n 1 24 MET n 1 25 ALA n 1 26 ALA n 1 27 GLN n 1 28 LEU n 1 29 GLY n 1 30 VAL n 1 31 ALA n 1 32 TYR n 1 33 SER n 1 34 ASP n 1 35 VAL n 1 36 PHE n 1 37 ASN n 1 38 VAL n 1 39 GLY n 1 40 PHE n 1 41 GLY n 1 42 VAL n 1 43 PHE n 1 44 ALA n 1 45 GLY n 1 46 GLY n 1 47 PRO n 1 48 TYR n 1 49 ASP n 1 50 CYS n 1 51 ALA n 1 52 ARG n 1 53 ASN n 1 54 GLN n 1 55 TYR n 1 56 TYR n 1 57 THR n 1 58 SER n 1 59 CYS n 1 60 MET n 1 61 TYR n 1 62 ASN n 1 63 GLY n 1 64 TYR n 1 65 PRO n 1 66 SER n 1 67 ILE n 1 68 THR n 1 69 THR n 1 70 PRO n 1 71 THR n 1 72 ALA n 1 73 ASN n 1 74 MET n 1 75 LYS n 1 76 SER n 1 77 TRP n 1 78 SER n 1 79 GLY n 1 80 ASN n 1 81 GLN n 1 82 ILE n 1 83 ALA n 1 84 SER n 1 85 VAL n 1 86 ALA n 1 87 ASN n 1 88 LEU n 1 89 GLY n 1 90 GLN n 1 91 ARG n 1 92 LYS n 1 93 ILE n 1 94 TYR n 1 95 MET n 1 96 TRP n 1 97 THR n 1 98 GLY n 1 99 SER n 1 100 SER n 1 101 ASP n 1 102 THR n 1 103 THR n 1 104 VAL n 1 105 GLY n 1 106 PRO n 1 107 ASN n 1 108 VAL n 1 109 MET n 1 110 ASN n 1 111 GLN n 1 112 LEU n 1 113 LYS n 1 114 ALA n 1 115 GLN n 1 116 LEU n 1 117 GLY n 1 118 ASN n 1 119 PHE n 1 120 ASP n 1 121 ASN n 1 122 SER n 1 123 ALA n 1 124 ASN n 1 125 VAL n 1 126 SER n 1 127 TYR n 1 128 VAL n 1 129 THR n 1 130 THR n 1 131 THR n 1 132 GLY n 1 133 ALA n 1 134 VAL n 1 135 HIS n 1 136 THR n 1 137 PHE n 1 138 PRO n 1 139 THR n 1 140 ASP n 1 141 PHE n 1 142 ASN n 1 143 GLY n 1 144 ALA n 1 145 GLY n 1 146 ASP n 1 147 ASN n 1 148 SER n 1 149 CYS n 1 150 SER n 1 151 LEU n 1 152 SER n 1 153 THR n 1 154 SER n 1 155 PRO n 1 156 TYR n 1 157 ILE n 1 158 SER n 1 159 ASN n 1 160 CYS n 1 161 ASN n 1 162 TYR n 1 163 ASP n 1 164 GLY n 1 165 ALA n 1 166 GLY n 1 167 ALA n 1 168 ALA n 1 169 LEU n 1 170 LYS n 1 171 TRP n 1 172 ILE n 1 173 TYR n 1 174 GLY n 1 175 SER n 1 176 LEU n 1 177 ASN n 1 178 ALA n 1 179 ARG n 1 180 ASN n 1 181 THR n 1 182 GLY n 1 183 THR n 1 184 LEU n 1 185 SER n 1 186 GLY n 1 187 SER n 1 188 VAL n 1 189 LEU n 1 190 SER n 1 191 PHE n 1 192 ALA n 1 193 GLN n 1 194 SER n 1 195 GLY n 1 196 SER n 1 197 TYR n 1 198 GLY n 1 199 ALA n 1 200 ASN n 1 201 GLY n 1 202 MET n 1 203 ASP n 1 204 THR n 1 205 THR n 1 206 GLY n 1 207 TYR n 1 208 LEU n 1 209 TYR n 1 210 VAL n 1 211 PRO n 1 212 GLN n 1 213 SER n 1 214 CYS n 1 215 ALA n 1 216 SER n 1 217 GLY n 1 218 ALA n 1 219 THR n 1 220 VAL n 1 221 CYS n 1 222 SER n 1 223 LEU n 1 224 HIS n 1 225 VAL n 1 226 ALA n 1 227 LEU n 1 228 HIS n 1 229 GLY n 1 230 CYS n 1 231 LEU n 1 232 GLN n 1 233 SER n 1 234 TYR n 1 235 SER n 1 236 SER n 1 237 ILE n 1 238 GLY n 1 239 SER n 1 240 ARG n 1 241 PHE n 1 242 ILE n 1 243 GLN n 1 244 ASN n 1 245 THR n 1 246 GLY n 1 247 TYR n 1 248 ASN n 1 249 LYS n 1 250 TRP n 1 251 ALA n 1 252 ASP n 1 253 THR n 1 254 ASN n 1 255 ASN n 1 256 MET n 1 257 ILE n 1 258 ILE n 1 259 LEU n 1 260 TYR n 1 261 PRO n 1 262 GLN n 1 263 ALA n 1 264 ILE n 1 265 PRO n 1 266 ASP n 1 267 TYR n 1 268 THR n 1 269 ILE n 1 270 HIS n 1 271 ALA n 1 272 ILE n 1 273 TRP n 1 274 ASN n 1 275 GLY n 1 276 GLY n 1 277 VAL n 1 278 LEU n 1 279 SER n 1 280 ASN n 1 281 PRO n 1 282 ASN n 1 283 GLY n 1 284 CYS n 1 285 TRP n 1 286 ASP n 1 287 TRP n 1 288 VAL n 1 289 GLY n 1 290 TRP n 1 291 TYR n 1 292 GLY n 1 293 SER n 1 294 ASN n 1 295 ALA n 1 296 ASP n 1 297 GLN n 1 298 ILE n 1 299 GLY n 1 300 GLY n 1 301 VAL n 1 302 GLN n 1 303 MET n 1 304 ALA n 1 305 ALA n 1 306 ILE n 1 307 VAL n 1 308 GLY n 1 309 GLN n 1 310 VAL n 1 311 LYS n 1 312 GLN n 1 313 ILE n 1 314 VAL n 1 315 SER n 1 316 GLY n 1 317 PHE n 1 318 GLN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Penicillium funiculosum' _entity_src_nat.pdbx_ncbi_taxonomy_id 28572 _entity_src_nat.genus Penicillium _entity_src_nat.species ? _entity_src_nat.strain 'IFO 6345' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q4W9V8_ASPFU _struct_ref.pdbx_db_accession Q4W9V8 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 66 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D80 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 310 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q4W9V8 _struct_ref_seq.db_align_beg 66 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 375 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 330 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2D80 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.87 _exptl_crystal.density_percent_sol 34.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '20% PEG 8000, 50mM potassium dihydrogenphosphate, 5% glycerol, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-11-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2D80 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 38.9 _reflns.d_resolution_high 1.7 _reflns.number_obs 27251 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.4 _reflns.B_iso_Wilson_estimate 16.6 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.36 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.64 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2D80 _refine.ls_number_reflns_obs 27251 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 998709.60 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.89 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.174 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.174 _refine.ls_R_factor_R_free 0.204 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 2723 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 18.3 _refine.aniso_B[1][1] 2.31 _refine.aniso_B[2][2] 3.14 _refine.aniso_B[3][3] -5.46 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 2.47 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.381327 _refine.solvent_model_param_bsol 42.2712 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2D80 _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.20 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2357 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 240 _refine_hist.number_atoms_total 2658 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 38.89 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.9 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.66 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.99 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.35 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.61 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.19 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_R_work 4016 _refine_ls_shell.R_factor_R_work 0.253 _refine_ls_shell.percent_reflns_obs 99.8 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.R_factor_R_free_error 0.013 _refine_ls_shell.percent_reflns_R_free 10.9 _refine_ls_shell.number_reflns_R_free 489 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 4016 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param_dih protein.top_dih 'X-RAY DIFFRACTION' 2 water_rep.param water_rep.top 'X-RAY DIFFRACTION' 3 carbohydrate.param carbohydrate.top 'X-RAY DIFFRACTION' # _struct.entry_id 2D80 _struct.title 'Crystal structure of PHB depolymerase from Penicillium funiculosum' _struct.pdbx_descriptor 'PHB depolymerase (E.C.3.1.1.75)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D80 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'alpha/beta hydrolase fold, circular permutation, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 19 ? TYR A 32 ? SER A 39 TYR A 52 1 ? 14 HELX_P HELX_P2 2 TYR A 55 ? MET A 60 ? TYR A 75 MET A 80 5 ? 6 HELX_P HELX_P3 3 ILE A 67 ? SER A 78 ? ILE A 87 SER A 98 1 ? 12 HELX_P HELX_P4 4 SER A 84 ? ARG A 91 ? SER A 104 ARG A 111 5 ? 8 HELX_P HELX_P5 5 GLY A 105 ? GLY A 117 ? GLY A 125 GLY A 137 1 ? 13 HELX_P HELX_P6 6 ASN A 121 ? ALA A 123 ? ASN A 141 ALA A 143 5 ? 3 HELX_P HELX_P7 7 ASP A 163 ? GLY A 174 ? ASP A 183 GLY A 194 1 ? 12 HELX_P HELX_P8 8 SER A 194 ? GLY A 198 ? SER A 214 GLY A 218 5 ? 5 HELX_P HELX_P9 9 PRO A 211 ? SER A 216 ? PRO A 231 SER A 236 1 ? 6 HELX_P HELX_P10 10 SER A 233 ? GLY A 238 ? SER A 253 GLY A 258 1 ? 6 HELX_P HELX_P11 11 SER A 239 ? THR A 245 ? SER A 259 THR A 265 1 ? 7 HELX_P HELX_P12 12 GLY A 246 ? ASP A 252 ? GLY A 266 ASP A 272 1 ? 7 HELX_P HELX_P13 13 GLY A 300 ? SER A 315 ? GLY A 320 SER A 335 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 59 SG ? ? A CYS 70 A CYS 79 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf2 disulf ? ? A CYS 149 SG ? ? ? 1_555 A CYS 160 SG ? ? A CYS 169 A CYS 180 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 214 SG ? ? ? 1_555 A CYS 221 SG ? ? A CYS 234 A CYS 241 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? A CYS 230 SG ? ? ? 1_555 A CYS 284 SG ? ? A CYS 250 A CYS 304 1_555 ? ? ? ? ? ? ? 2.044 ? ? covale1 covale one ? A ASN 124 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 144 B NAG 1 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.382 ? ? covale3 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.388 ? ? covale4 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.400 ? ? covale5 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 5 1_555 ? ? ? ? ? ? ? 1.400 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 154 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 174 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 155 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 175 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.41 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 125 ? THR A 130 ? VAL A 145 THR A 150 A 2 LYS A 92 ? GLY A 98 ? LYS A 112 GLY A 118 A 3 GLY A 39 ? PHE A 43 ? GLY A 59 PHE A 63 A 4 VAL A 8 ? LEU A 18 ? VAL A 28 LEU A 38 A 5 CYS A 221 ? LEU A 227 ? CYS A 241 LEU A 247 A 6 MET A 256 ? TYR A 260 ? MET A 276 TYR A 280 A 7 THR A 205 ? VAL A 210 ? THR A 225 VAL A 230 A 8 SER A 187 ? ALA A 192 ? SER A 207 ALA A 212 B 1 PHE A 137 ? THR A 139 ? PHE A 157 THR A 159 B 2 ILE A 157 ? ASN A 159 ? ILE A 177 ASN A 179 C 1 ASP A 266 ? ALA A 271 ? ASP A 286 ALA A 291 C 2 VAL A 277 ? ASN A 280 ? VAL A 297 ASN A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 128 ? O VAL A 148 N MET A 95 ? N MET A 115 A 2 3 O TYR A 94 ? O TYR A 114 N VAL A 42 ? N VAL A 62 A 3 4 O PHE A 43 ? O PHE A 63 N GLY A 17 ? N GLY A 37 A 4 5 N SER A 16 ? N SER A 36 O LEU A 227 ? O LEU A 247 A 5 6 N ALA A 226 ? N ALA A 246 O LEU A 259 ? O LEU A 279 A 6 7 O TYR A 260 ? O TYR A 280 N TYR A 207 ? N TYR A 227 A 7 8 O GLY A 206 ? O GLY A 226 N PHE A 191 ? N PHE A 211 B 1 2 N PHE A 137 ? N PHE A 157 O SER A 158 ? O SER A 178 C 1 2 N HIS A 270 ? N HIS A 290 O LEU A 278 ? O LEU A 298 # _database_PDB_matrix.entry_id 2D80 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D80 _atom_sites.fract_transf_matrix[1][1] 0.020199 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006510 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014519 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027125 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 21 21 THR THR A . n A 1 2 ALA 2 22 22 ALA ALA A . n A 1 3 LEU 3 23 23 LEU LEU A . n A 1 4 PRO 4 24 24 PRO PRO A . n A 1 5 ALA 5 25 25 ALA ALA A . n A 1 6 PHE 6 26 26 PHE PHE A . n A 1 7 ASN 7 27 27 ASN ASN A . n A 1 8 VAL 8 28 28 VAL VAL A . n A 1 9 ASN 9 29 29 ASN ASN A . n A 1 10 PRO 10 30 30 PRO PRO A . n A 1 11 ASN 11 31 31 ASN ASN A . n A 1 12 SER 12 32 32 SER SER A . n A 1 13 VAL 13 33 33 VAL VAL A . n A 1 14 SER 14 34 34 SER SER A . n A 1 15 VAL 15 35 35 VAL VAL A . n A 1 16 SER 16 36 36 SER SER A . n A 1 17 GLY 17 37 37 GLY GLY A . n A 1 18 LEU 18 38 38 LEU LEU A . n A 1 19 SER 19 39 39 SER SER A . n A 1 20 SER 20 40 40 SER SER A . n A 1 21 GLY 21 41 41 GLY GLY A . n A 1 22 GLY 22 42 42 GLY GLY A . n A 1 23 TYR 23 43 43 TYR TYR A . n A 1 24 MET 24 44 44 MET MET A . n A 1 25 ALA 25 45 45 ALA ALA A . n A 1 26 ALA 26 46 46 ALA ALA A . n A 1 27 GLN 27 47 47 GLN GLN A . n A 1 28 LEU 28 48 48 LEU LEU A . n A 1 29 GLY 29 49 49 GLY GLY A . n A 1 30 VAL 30 50 50 VAL VAL A . n A 1 31 ALA 31 51 51 ALA ALA A . n A 1 32 TYR 32 52 52 TYR TYR A . n A 1 33 SER 33 53 53 SER SER A . n A 1 34 ASP 34 54 54 ASP ASP A . n A 1 35 VAL 35 55 55 VAL VAL A . n A 1 36 PHE 36 56 56 PHE PHE A . n A 1 37 ASN 37 57 57 ASN ASN A . n A 1 38 VAL 38 58 58 VAL VAL A . n A 1 39 GLY 39 59 59 GLY GLY A . n A 1 40 PHE 40 60 60 PHE PHE A . n A 1 41 GLY 41 61 61 GLY GLY A . n A 1 42 VAL 42 62 62 VAL VAL A . n A 1 43 PHE 43 63 63 PHE PHE A . n A 1 44 ALA 44 64 64 ALA ALA A . n A 1 45 GLY 45 65 65 GLY GLY A . n A 1 46 GLY 46 66 66 GLY GLY A . n A 1 47 PRO 47 67 67 PRO PRO A . n A 1 48 TYR 48 68 68 TYR TYR A . n A 1 49 ASP 49 69 69 ASP ASP A . n A 1 50 CYS 50 70 70 CYS CYS A . n A 1 51 ALA 51 71 71 ALA ALA A . n A 1 52 ARG 52 72 72 ARG ARG A . n A 1 53 ASN 53 73 73 ASN ASN A . n A 1 54 GLN 54 74 74 GLN GLN A . n A 1 55 TYR 55 75 75 TYR TYR A . n A 1 56 TYR 56 76 76 TYR TYR A . n A 1 57 THR 57 77 77 THR THR A . n A 1 58 SER 58 78 78 SER SER A . n A 1 59 CYS 59 79 79 CYS CYS A . n A 1 60 MET 60 80 80 MET MET A . n A 1 61 TYR 61 81 81 TYR TYR A . n A 1 62 ASN 62 82 82 ASN ASN A . n A 1 63 GLY 63 83 83 GLY GLY A . n A 1 64 TYR 64 84 84 TYR TYR A . n A 1 65 PRO 65 85 85 PRO PRO A . n A 1 66 SER 66 86 86 SER SER A . n A 1 67 ILE 67 87 87 ILE ILE A . n A 1 68 THR 68 88 88 THR THR A . n A 1 69 THR 69 89 89 THR THR A . n A 1 70 PRO 70 90 90 PRO PRO A . n A 1 71 THR 71 91 91 THR THR A . n A 1 72 ALA 72 92 92 ALA ALA A . n A 1 73 ASN 73 93 93 ASN ASN A . n A 1 74 MET 74 94 94 MET MET A . n A 1 75 LYS 75 95 95 LYS LYS A . n A 1 76 SER 76 96 96 SER SER A . n A 1 77 TRP 77 97 97 TRP TRP A . n A 1 78 SER 78 98 98 SER SER A . n A 1 79 GLY 79 99 99 GLY GLY A . n A 1 80 ASN 80 100 100 ASN ASN A . n A 1 81 GLN 81 101 101 GLN GLN A . n A 1 82 ILE 82 102 102 ILE ILE A . n A 1 83 ALA 83 103 103 ALA ALA A . n A 1 84 SER 84 104 104 SER SER A . n A 1 85 VAL 85 105 105 VAL VAL A . n A 1 86 ALA 86 106 106 ALA ALA A . n A 1 87 ASN 87 107 107 ASN ASN A . n A 1 88 LEU 88 108 108 LEU LEU A . n A 1 89 GLY 89 109 109 GLY GLY A . n A 1 90 GLN 90 110 110 GLN GLN A . n A 1 91 ARG 91 111 111 ARG ARG A . n A 1 92 LYS 92 112 112 LYS LYS A . n A 1 93 ILE 93 113 113 ILE ILE A . n A 1 94 TYR 94 114 114 TYR TYR A . n A 1 95 MET 95 115 115 MET MET A . n A 1 96 TRP 96 116 116 TRP TRP A . n A 1 97 THR 97 117 117 THR THR A . n A 1 98 GLY 98 118 118 GLY GLY A . n A 1 99 SER 99 119 119 SER SER A . n A 1 100 SER 100 120 120 SER SER A . n A 1 101 ASP 101 121 121 ASP ASP A . n A 1 102 THR 102 122 122 THR THR A . n A 1 103 THR 103 123 123 THR THR A . n A 1 104 VAL 104 124 124 VAL VAL A . n A 1 105 GLY 105 125 125 GLY GLY A . n A 1 106 PRO 106 126 126 PRO PRO A . n A 1 107 ASN 107 127 127 ASN ASN A . n A 1 108 VAL 108 128 128 VAL VAL A . n A 1 109 MET 109 129 129 MET MET A . n A 1 110 ASN 110 130 130 ASN ASN A . n A 1 111 GLN 111 131 131 GLN GLN A . n A 1 112 LEU 112 132 132 LEU LEU A . n A 1 113 LYS 113 133 133 LYS LYS A . n A 1 114 ALA 114 134 134 ALA ALA A . n A 1 115 GLN 115 135 135 GLN GLN A . n A 1 116 LEU 116 136 136 LEU LEU A . n A 1 117 GLY 117 137 137 GLY GLY A . n A 1 118 ASN 118 138 138 ASN ASN A . n A 1 119 PHE 119 139 139 PHE PHE A . n A 1 120 ASP 120 140 140 ASP ASP A . n A 1 121 ASN 121 141 141 ASN ASN A . n A 1 122 SER 122 142 142 SER SER A . n A 1 123 ALA 123 143 143 ALA ALA A . n A 1 124 ASN 124 144 144 ASN ASN A . n A 1 125 VAL 125 145 145 VAL VAL A . n A 1 126 SER 126 146 146 SER SER A . n A 1 127 TYR 127 147 147 TYR TYR A . n A 1 128 VAL 128 148 148 VAL VAL A . n A 1 129 THR 129 149 149 THR THR A . n A 1 130 THR 130 150 150 THR THR A . n A 1 131 THR 131 151 151 THR THR A . n A 1 132 GLY 132 152 152 GLY GLY A . n A 1 133 ALA 133 153 153 ALA ALA A . n A 1 134 VAL 134 154 154 VAL VAL A . n A 1 135 HIS 135 155 155 HIS HIS A . n A 1 136 THR 136 156 156 THR THR A . n A 1 137 PHE 137 157 157 PHE PHE A . n A 1 138 PRO 138 158 158 PRO PRO A . n A 1 139 THR 139 159 159 THR THR A . n A 1 140 ASP 140 160 160 ASP ASP A . n A 1 141 PHE 141 161 161 PHE PHE A . n A 1 142 ASN 142 162 162 ASN ASN A . n A 1 143 GLY 143 163 163 GLY GLY A . n A 1 144 ALA 144 164 164 ALA ALA A . n A 1 145 GLY 145 165 165 GLY GLY A . n A 1 146 ASP 146 166 166 ASP ASP A . n A 1 147 ASN 147 167 167 ASN ASN A . n A 1 148 SER 148 168 168 SER SER A . n A 1 149 CYS 149 169 169 CYS CYS A . n A 1 150 SER 150 170 170 SER SER A . n A 1 151 LEU 151 171 171 LEU LEU A . n A 1 152 SER 152 172 172 SER SER A . n A 1 153 THR 153 173 173 THR THR A . n A 1 154 SER 154 174 174 SER SER A . n A 1 155 PRO 155 175 175 PRO PRO A . n A 1 156 TYR 156 176 176 TYR TYR A . n A 1 157 ILE 157 177 177 ILE ILE A . n A 1 158 SER 158 178 178 SER SER A . n A 1 159 ASN 159 179 179 ASN ASN A . n A 1 160 CYS 160 180 180 CYS CYS A . n A 1 161 ASN 161 181 181 ASN ASN A . n A 1 162 TYR 162 182 182 TYR TYR A . n A 1 163 ASP 163 183 183 ASP ASP A . n A 1 164 GLY 164 184 184 GLY GLY A . n A 1 165 ALA 165 185 185 ALA ALA A . n A 1 166 GLY 166 186 186 GLY GLY A . n A 1 167 ALA 167 187 187 ALA ALA A . n A 1 168 ALA 168 188 188 ALA ALA A . n A 1 169 LEU 169 189 189 LEU LEU A . n A 1 170 LYS 170 190 190 LYS LYS A . n A 1 171 TRP 171 191 191 TRP TRP A . n A 1 172 ILE 172 192 192 ILE ILE A . n A 1 173 TYR 173 193 193 TYR TYR A . n A 1 174 GLY 174 194 194 GLY GLY A . n A 1 175 SER 175 195 195 SER SER A . n A 1 176 LEU 176 196 196 LEU LEU A . n A 1 177 ASN 177 197 197 ASN ASN A . n A 1 178 ALA 178 198 198 ALA ALA A . n A 1 179 ARG 179 199 199 ARG ARG A . n A 1 180 ASN 180 200 200 ASN ASN A . n A 1 181 THR 181 201 201 THR THR A . n A 1 182 GLY 182 202 202 GLY GLY A . n A 1 183 THR 183 203 203 THR THR A . n A 1 184 LEU 184 204 204 LEU LEU A . n A 1 185 SER 185 205 205 SER SER A . n A 1 186 GLY 186 206 206 GLY GLY A . n A 1 187 SER 187 207 207 SER SER A . n A 1 188 VAL 188 208 208 VAL VAL A . n A 1 189 LEU 189 209 209 LEU LEU A . n A 1 190 SER 190 210 210 SER SER A . n A 1 191 PHE 191 211 211 PHE PHE A . n A 1 192 ALA 192 212 212 ALA ALA A . n A 1 193 GLN 193 213 213 GLN GLN A . n A 1 194 SER 194 214 214 SER SER A . n A 1 195 GLY 195 215 215 GLY GLY A . n A 1 196 SER 196 216 216 SER SER A . n A 1 197 TYR 197 217 217 TYR TYR A . n A 1 198 GLY 198 218 218 GLY GLY A . n A 1 199 ALA 199 219 219 ALA ALA A . n A 1 200 ASN 200 220 220 ASN ASN A . n A 1 201 GLY 201 221 221 GLY GLY A . n A 1 202 MET 202 222 222 MET MET A . n A 1 203 ASP 203 223 223 ASP ASP A . n A 1 204 THR 204 224 224 THR THR A . n A 1 205 THR 205 225 225 THR THR A . n A 1 206 GLY 206 226 226 GLY GLY A . n A 1 207 TYR 207 227 227 TYR TYR A . n A 1 208 LEU 208 228 228 LEU LEU A . n A 1 209 TYR 209 229 229 TYR TYR A . n A 1 210 VAL 210 230 230 VAL VAL A . n A 1 211 PRO 211 231 231 PRO PRO A . n A 1 212 GLN 212 232 232 GLN GLN A . n A 1 213 SER 213 233 233 SER SER A . n A 1 214 CYS 214 234 234 CYS CYS A . n A 1 215 ALA 215 235 235 ALA ALA A . n A 1 216 SER 216 236 236 SER SER A . n A 1 217 GLY 217 237 237 GLY GLY A . n A 1 218 ALA 218 238 238 ALA ALA A . n A 1 219 THR 219 239 239 THR THR A . n A 1 220 VAL 220 240 240 VAL VAL A . n A 1 221 CYS 221 241 241 CYS CYS A . n A 1 222 SER 222 242 242 SER SER A . n A 1 223 LEU 223 243 243 LEU LEU A . n A 1 224 HIS 224 244 244 HIS HIS A . n A 1 225 VAL 225 245 245 VAL VAL A . n A 1 226 ALA 226 246 246 ALA ALA A . n A 1 227 LEU 227 247 247 LEU LEU A . n A 1 228 HIS 228 248 248 HIS HIS A . n A 1 229 GLY 229 249 249 GLY GLY A . n A 1 230 CYS 230 250 250 CYS CYS A . n A 1 231 LEU 231 251 251 LEU LEU A . n A 1 232 GLN 232 252 252 GLN GLN A . n A 1 233 SER 233 253 253 SER SER A . n A 1 234 TYR 234 254 254 TYR TYR A . n A 1 235 SER 235 255 255 SER SER A . n A 1 236 SER 236 256 256 SER SER A . n A 1 237 ILE 237 257 257 ILE ILE A . n A 1 238 GLY 238 258 258 GLY GLY A . n A 1 239 SER 239 259 259 SER SER A . n A 1 240 ARG 240 260 260 ARG ARG A . n A 1 241 PHE 241 261 261 PHE PHE A . n A 1 242 ILE 242 262 262 ILE ILE A . n A 1 243 GLN 243 263 263 GLN GLN A . n A 1 244 ASN 244 264 264 ASN ASN A . n A 1 245 THR 245 265 265 THR THR A . n A 1 246 GLY 246 266 266 GLY GLY A . n A 1 247 TYR 247 267 267 TYR TYR A . n A 1 248 ASN 248 268 268 ASN ASN A . n A 1 249 LYS 249 269 269 LYS LYS A . n A 1 250 TRP 250 270 270 TRP TRP A . n A 1 251 ALA 251 271 271 ALA ALA A . n A 1 252 ASP 252 272 272 ASP ASP A . n A 1 253 THR 253 273 273 THR THR A . n A 1 254 ASN 254 274 274 ASN ASN A . n A 1 255 ASN 255 275 275 ASN ASN A . n A 1 256 MET 256 276 276 MET MET A . n A 1 257 ILE 257 277 277 ILE ILE A . n A 1 258 ILE 258 278 278 ILE ILE A . n A 1 259 LEU 259 279 279 LEU LEU A . n A 1 260 TYR 260 280 280 TYR TYR A . n A 1 261 PRO 261 281 281 PRO PRO A . n A 1 262 GLN 262 282 282 GLN GLN A . n A 1 263 ALA 263 283 283 ALA ALA A . n A 1 264 ILE 264 284 284 ILE ILE A . n A 1 265 PRO 265 285 285 PRO PRO A . n A 1 266 ASP 266 286 286 ASP ASP A . n A 1 267 TYR 267 287 287 TYR TYR A . n A 1 268 THR 268 288 288 THR THR A . n A 1 269 ILE 269 289 289 ILE ILE A . n A 1 270 HIS 270 290 290 HIS HIS A . n A 1 271 ALA 271 291 291 ALA ALA A . n A 1 272 ILE 272 292 292 ILE ILE A . n A 1 273 TRP 273 293 293 TRP TRP A . n A 1 274 ASN 274 294 294 ASN ASN A . n A 1 275 GLY 275 295 295 GLY GLY A . n A 1 276 GLY 276 296 296 GLY GLY A . n A 1 277 VAL 277 297 297 VAL VAL A . n A 1 278 LEU 278 298 298 LEU LEU A . n A 1 279 SER 279 299 299 SER SER A . n A 1 280 ASN 280 300 300 ASN ASN A . n A 1 281 PRO 281 301 301 PRO PRO A . n A 1 282 ASN 282 302 302 ASN ASN A . n A 1 283 GLY 283 303 303 GLY GLY A . n A 1 284 CYS 284 304 304 CYS CYS A . n A 1 285 TRP 285 305 305 TRP TRP A . n A 1 286 ASP 286 306 306 ASP ASP A . n A 1 287 TRP 287 307 307 TRP TRP A . n A 1 288 VAL 288 308 308 VAL VAL A . n A 1 289 GLY 289 309 309 GLY GLY A . n A 1 290 TRP 290 310 310 TRP TRP A . n A 1 291 TYR 291 311 311 TYR TYR A . n A 1 292 GLY 292 312 312 GLY GLY A . n A 1 293 SER 293 313 313 SER SER A . n A 1 294 ASN 294 314 314 ASN ASN A . n A 1 295 ALA 295 315 315 ALA ALA A . n A 1 296 ASP 296 316 316 ASP ASP A . n A 1 297 GLN 297 317 317 GLN GLN A . n A 1 298 ILE 298 318 318 ILE ILE A . n A 1 299 GLY 299 319 319 GLY GLY A . n A 1 300 GLY 300 320 320 GLY GLY A . n A 1 301 VAL 301 321 321 VAL VAL A . n A 1 302 GLN 302 322 322 GLN GLN A . n A 1 303 MET 303 323 323 MET MET A . n A 1 304 ALA 304 324 324 ALA ALA A . n A 1 305 ALA 305 325 325 ALA ALA A . n A 1 306 ILE 306 326 326 ILE ILE A . n A 1 307 VAL 307 327 327 VAL VAL A . n A 1 308 GLY 308 328 328 GLY GLY A . n A 1 309 GLN 309 329 329 GLN GLN A . n A 1 310 VAL 310 330 330 VAL VAL A . n A 1 311 LYS 311 331 331 LYS LYS A . n A 1 312 GLN 312 332 332 GLN GLN A . n A 1 313 ILE 313 333 333 ILE ILE A . n A 1 314 VAL 314 334 334 VAL VAL A . n A 1 315 SER 315 335 335 SER SER A . n A 1 316 GLY 316 336 336 GLY GLY A . n A 1 317 PHE 317 337 337 PHE PHE A . n A 1 318 GLN 318 338 338 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 501 501 HOH HOH A . C 3 HOH 2 502 502 HOH HOH A . C 3 HOH 3 503 503 HOH HOH A . C 3 HOH 4 504 504 HOH HOH A . C 3 HOH 5 505 505 HOH HOH A . C 3 HOH 6 506 506 HOH HOH A . C 3 HOH 7 507 507 HOH HOH A . C 3 HOH 8 508 508 HOH HOH A . C 3 HOH 9 509 509 HOH HOH A . C 3 HOH 10 510 510 HOH HOH A . C 3 HOH 11 511 511 HOH HOH A . C 3 HOH 12 512 512 HOH HOH A . C 3 HOH 13 513 513 HOH HOH A . C 3 HOH 14 514 514 HOH HOH A . C 3 HOH 15 515 515 HOH HOH A . C 3 HOH 16 516 516 HOH HOH A . C 3 HOH 17 517 517 HOH HOH A . C 3 HOH 18 518 518 HOH HOH A . C 3 HOH 19 519 519 HOH HOH A . C 3 HOH 20 520 520 HOH HOH A . C 3 HOH 21 521 521 HOH HOH A . C 3 HOH 22 522 522 HOH HOH A . C 3 HOH 23 523 523 HOH HOH A . C 3 HOH 24 524 524 HOH HOH A . C 3 HOH 25 525 525 HOH HOH A . C 3 HOH 26 526 526 HOH HOH A . C 3 HOH 27 527 527 HOH HOH A . C 3 HOH 28 528 528 HOH HOH A . C 3 HOH 29 529 529 HOH HOH A . C 3 HOH 30 530 530 HOH HOH A . C 3 HOH 31 531 531 HOH HOH A . C 3 HOH 32 532 532 HOH HOH A . C 3 HOH 33 533 533 HOH HOH A . C 3 HOH 34 534 534 HOH HOH A . C 3 HOH 35 535 535 HOH HOH A . C 3 HOH 36 536 536 HOH HOH A . C 3 HOH 37 537 537 HOH HOH A . C 3 HOH 38 538 538 HOH HOH A . C 3 HOH 39 539 539 HOH HOH A . C 3 HOH 40 540 540 HOH HOH A . C 3 HOH 41 541 541 HOH HOH A . C 3 HOH 42 542 542 HOH HOH A . C 3 HOH 43 543 543 HOH HOH A . C 3 HOH 44 544 544 HOH HOH A . C 3 HOH 45 545 545 HOH HOH A . C 3 HOH 46 546 546 HOH HOH A . C 3 HOH 47 547 547 HOH HOH A . C 3 HOH 48 548 548 HOH HOH A . C 3 HOH 49 549 549 HOH HOH A . C 3 HOH 50 550 550 HOH HOH A . C 3 HOH 51 551 551 HOH HOH A . C 3 HOH 52 552 552 HOH HOH A . C 3 HOH 53 553 553 HOH HOH A . C 3 HOH 54 554 554 HOH HOH A . C 3 HOH 55 555 555 HOH HOH A . C 3 HOH 56 556 556 HOH HOH A . C 3 HOH 57 557 557 HOH HOH A . C 3 HOH 58 558 558 HOH HOH A . C 3 HOH 59 559 559 HOH HOH A . C 3 HOH 60 560 560 HOH HOH A . C 3 HOH 61 561 561 HOH HOH A . C 3 HOH 62 562 562 HOH HOH A . C 3 HOH 63 563 563 HOH HOH A . C 3 HOH 64 564 564 HOH HOH A . C 3 HOH 65 565 565 HOH HOH A . C 3 HOH 66 566 566 HOH HOH A . C 3 HOH 67 567 567 HOH HOH A . C 3 HOH 68 568 568 HOH HOH A . C 3 HOH 69 569 569 HOH HOH A . C 3 HOH 70 570 570 HOH HOH A . C 3 HOH 71 571 571 HOH HOH A . C 3 HOH 72 572 572 HOH HOH A . C 3 HOH 73 573 573 HOH HOH A . C 3 HOH 74 574 574 HOH HOH A . C 3 HOH 75 575 575 HOH HOH A . C 3 HOH 76 576 576 HOH HOH A . C 3 HOH 77 577 577 HOH HOH A . C 3 HOH 78 578 578 HOH HOH A . C 3 HOH 79 579 579 HOH HOH A . C 3 HOH 80 580 580 HOH HOH A . C 3 HOH 81 581 581 HOH HOH A . C 3 HOH 82 582 582 HOH HOH A . C 3 HOH 83 583 583 HOH HOH A . C 3 HOH 84 584 584 HOH HOH A . C 3 HOH 85 585 585 HOH HOH A . C 3 HOH 86 586 586 HOH HOH A . C 3 HOH 87 587 587 HOH HOH A . C 3 HOH 88 588 588 HOH HOH A . C 3 HOH 89 589 589 HOH HOH A . C 3 HOH 90 591 591 HOH HOH A . C 3 HOH 91 592 592 HOH HOH A . C 3 HOH 92 593 593 HOH HOH A . C 3 HOH 93 594 594 HOH HOH A . C 3 HOH 94 595 595 HOH HOH A . C 3 HOH 95 596 596 HOH HOH A . C 3 HOH 96 597 597 HOH HOH A . C 3 HOH 97 598 598 HOH HOH A . C 3 HOH 98 599 599 HOH HOH A . C 3 HOH 99 600 600 HOH HOH A . C 3 HOH 100 601 601 HOH HOH A . C 3 HOH 101 602 602 HOH HOH A . C 3 HOH 102 603 603 HOH HOH A . C 3 HOH 103 604 604 HOH HOH A . C 3 HOH 104 605 605 HOH HOH A . C 3 HOH 105 606 606 HOH HOH A . C 3 HOH 106 607 607 HOH HOH A . C 3 HOH 107 608 608 HOH HOH A . C 3 HOH 108 609 609 HOH HOH A . C 3 HOH 109 610 610 HOH HOH A . C 3 HOH 110 611 611 HOH HOH A . C 3 HOH 111 612 612 HOH HOH A . C 3 HOH 112 613 613 HOH HOH A . C 3 HOH 113 614 614 HOH HOH A . C 3 HOH 114 615 615 HOH HOH A . C 3 HOH 115 616 616 HOH HOH A . C 3 HOH 116 617 617 HOH HOH A . C 3 HOH 117 618 618 HOH HOH A . C 3 HOH 118 619 619 HOH HOH A . C 3 HOH 119 620 620 HOH HOH A . C 3 HOH 120 621 621 HOH HOH A . C 3 HOH 121 622 622 HOH HOH A . C 3 HOH 122 623 623 HOH HOH A . C 3 HOH 123 624 624 HOH HOH A . C 3 HOH 124 625 625 HOH HOH A . C 3 HOH 125 626 626 HOH HOH A . C 3 HOH 126 627 627 HOH HOH A . C 3 HOH 127 628 628 HOH HOH A . C 3 HOH 128 629 629 HOH HOH A . C 3 HOH 129 630 630 HOH HOH A . C 3 HOH 130 631 631 HOH HOH A . C 3 HOH 131 632 632 HOH HOH A . C 3 HOH 132 633 633 HOH HOH A . C 3 HOH 133 634 634 HOH HOH A . C 3 HOH 134 635 635 HOH HOH A . C 3 HOH 135 636 636 HOH HOH A . C 3 HOH 136 637 637 HOH HOH A . C 3 HOH 137 638 638 HOH HOH A . C 3 HOH 138 639 639 HOH HOH A . C 3 HOH 139 640 640 HOH HOH A . C 3 HOH 140 641 641 HOH HOH A . C 3 HOH 141 642 642 HOH HOH A . C 3 HOH 142 643 643 HOH HOH A . C 3 HOH 143 644 644 HOH HOH A . C 3 HOH 144 645 645 HOH HOH A . C 3 HOH 145 646 646 HOH HOH A . C 3 HOH 146 647 647 HOH HOH A . C 3 HOH 147 648 648 HOH HOH A . C 3 HOH 148 649 649 HOH HOH A . C 3 HOH 149 650 650 HOH HOH A . C 3 HOH 150 651 651 HOH HOH A . C 3 HOH 151 652 652 HOH HOH A . C 3 HOH 152 653 653 HOH HOH A . C 3 HOH 153 654 654 HOH HOH A . C 3 HOH 154 655 655 HOH HOH A . C 3 HOH 155 656 656 HOH HOH A . C 3 HOH 156 657 657 HOH HOH A . C 3 HOH 157 658 658 HOH HOH A . C 3 HOH 158 659 659 HOH HOH A . C 3 HOH 159 660 660 HOH HOH A . C 3 HOH 160 661 661 HOH HOH A . C 3 HOH 161 662 662 HOH HOH A . C 3 HOH 162 663 663 HOH HOH A . C 3 HOH 163 664 664 HOH HOH A . C 3 HOH 164 665 665 HOH HOH A . C 3 HOH 165 666 666 HOH HOH A . C 3 HOH 166 667 667 HOH HOH A . C 3 HOH 167 668 668 HOH HOH A . C 3 HOH 168 669 669 HOH HOH A . C 3 HOH 169 670 670 HOH HOH A . C 3 HOH 170 671 671 HOH HOH A . C 3 HOH 171 672 672 HOH HOH A . C 3 HOH 172 673 673 HOH HOH A . C 3 HOH 173 674 674 HOH HOH A . C 3 HOH 174 675 675 HOH HOH A . C 3 HOH 175 676 676 HOH HOH A . C 3 HOH 176 677 677 HOH HOH A . C 3 HOH 177 678 678 HOH HOH A . C 3 HOH 178 679 679 HOH HOH A . C 3 HOH 179 680 680 HOH HOH A . C 3 HOH 180 681 681 HOH HOH A . C 3 HOH 181 682 682 HOH HOH A . C 3 HOH 182 683 683 HOH HOH A . C 3 HOH 183 684 684 HOH HOH A . C 3 HOH 184 685 685 HOH HOH A . C 3 HOH 185 686 686 HOH HOH A . C 3 HOH 186 687 687 HOH HOH A . C 3 HOH 187 688 688 HOH HOH A . C 3 HOH 188 689 689 HOH HOH A . C 3 HOH 189 690 690 HOH HOH A . C 3 HOH 190 691 691 HOH HOH A . C 3 HOH 191 692 692 HOH HOH A . C 3 HOH 192 693 693 HOH HOH A . C 3 HOH 193 694 694 HOH HOH A . C 3 HOH 194 695 695 HOH HOH A . C 3 HOH 195 696 696 HOH HOH A . C 3 HOH 196 697 697 HOH HOH A . C 3 HOH 197 698 698 HOH HOH A . C 3 HOH 198 699 699 HOH HOH A . C 3 HOH 199 700 700 HOH HOH A . C 3 HOH 200 701 701 HOH HOH A . C 3 HOH 201 702 702 HOH HOH A . C 3 HOH 202 703 703 HOH HOH A . C 3 HOH 203 704 704 HOH HOH A . C 3 HOH 204 705 705 HOH HOH A . C 3 HOH 205 706 706 HOH HOH A . C 3 HOH 206 707 707 HOH HOH A . C 3 HOH 207 708 708 HOH HOH A . C 3 HOH 208 709 709 HOH HOH A . C 3 HOH 209 710 710 HOH HOH A . C 3 HOH 210 711 711 HOH HOH A . C 3 HOH 211 712 712 HOH HOH A . C 3 HOH 212 713 713 HOH HOH A . C 3 HOH 213 714 714 HOH HOH A . C 3 HOH 214 715 715 HOH HOH A . C 3 HOH 215 716 716 HOH HOH A . C 3 HOH 216 717 717 HOH HOH A . C 3 HOH 217 718 718 HOH HOH A . C 3 HOH 218 719 719 HOH HOH A . C 3 HOH 219 720 720 HOH HOH A . C 3 HOH 220 721 721 HOH HOH A . C 3 HOH 221 722 722 HOH HOH A . C 3 HOH 222 723 723 HOH HOH A . C 3 HOH 223 724 724 HOH HOH A . C 3 HOH 224 725 725 HOH HOH A . C 3 HOH 225 726 726 HOH HOH A . C 3 HOH 226 727 727 HOH HOH A . C 3 HOH 227 728 728 HOH HOH A . C 3 HOH 228 729 729 HOH HOH A . C 3 HOH 229 730 730 HOH HOH A . C 3 HOH 230 731 731 HOH HOH A . C 3 HOH 231 732 732 HOH HOH A . C 3 HOH 232 733 733 HOH HOH A . C 3 HOH 233 734 734 HOH HOH A . C 3 HOH 234 735 735 HOH HOH A . C 3 HOH 235 736 736 HOH HOH A . C 3 HOH 236 737 737 HOH HOH A . C 3 HOH 237 738 738 HOH HOH A . C 3 HOH 238 739 739 HOH HOH A . C 3 HOH 239 740 740 HOH HOH A . C 3 HOH 240 741 741 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 124 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 144 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-31 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_branch_scheme 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_entity_branch 7 4 'Structure model' pdbx_entity_branch_descriptor 8 4 'Structure model' pdbx_entity_branch_link 9 4 'Structure model' pdbx_entity_branch_list 10 4 'Structure model' pdbx_entity_nonpoly 11 4 'Structure model' pdbx_nonpoly_scheme 12 4 'Structure model' pdbx_struct_assembly_gen 13 4 'Structure model' struct_asym 14 4 'Structure model' struct_conn 15 4 'Structure model' struct_site 16 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_asym_id' 2 4 'Structure model' '_atom_site.auth_seq_id' 3 4 'Structure model' '_atom_site.label_asym_id' 4 4 'Structure model' '_atom_site.label_entity_id' 5 4 'Structure model' '_chem_comp.name' 6 4 'Structure model' '_chem_comp.type' 7 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 8 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 4 'Structure model' '_struct_conn.pdbx_role' 10 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 39 ? ? 61.94 -129.26 2 1 TYR A 52 ? ? -112.31 50.76 3 1 ASN A 100 ? ? -126.36 -88.45 4 1 VAL A 124 ? ? -109.10 -78.31 5 1 LEU A 251 ? ? 59.08 17.73 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 401 n B 2 NAG 2 B NAG 2 A NAG 402 n B 2 BMA 3 B BMA 3 A MAN 403 n B 2 MAN 4 B MAN 4 A MAN 404 n B 2 MAN 5 B MAN 5 A MAN 405 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a4-b1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 3 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #